Methods for Inhibition of Membrane Fusion-Associated Events, Including Influenza Virus

The present invention relates, first, to DP178 (SEQ ID NO:1), a peptide corresponding to amino acids 638 to 673 of the HIV-1.sub.LAI transmembrane protein (TM) gp41, and portions or analogs of DP178 (SEQ ID NO:1), which exhibit anti-membrane fusion capability, antiviral activity, such as the ability to inhibit HIV transmission to uninfected CD-4.sup.+ cells, or an ability to modulate intracellular processes involving coiled-coil peptide structures. Further, the invention relates to the use of DP178 (SEQ ID NO:1) and DP178 portions and/or analogs as antifusogenic or antiviral compounds or as inhibitors of intracellular events involving coiled-coil peptide structures. The present invention also relates to peptides analogous to DP107, a peptide corresponding to amino acids 558 to 595 of the HIV-1.sub.LAI transmembrane protein (TM) gp41, having amino acid sequences present in other viruses, such as enveloped viruses, and/or other organisms, and further relates to the uses of such peptides. These peptides exhibit anti-membrane fusion capability, antiviral activity, or the ability to modulate intracellular processes involving coiled-coil peptide structures. The present invention additionally relates to methods for identifying compounds that disrupt the interaction between DP178 and DP107, and/or between DP107-like and DP178-like peptides. Further, the invention relates to the use of the peptides of the invention as diagnostic agents. For example, a DP178 peptide may be used as an HIV subtype-specific diagnostic. The invention is demonstrated, first, by way of an Example wherein DP178 (SEQ ID:1), and a peptide whose sequence is homologous to DP178 are each shown to be potent, non-cytotoxic inhibitors of HIV-1 transfer to uninfected CD-4.sup.+ cells. The invention is further demonstrated by Examples wherein peptides having structural and/or amino acid motif similarity to DP107 and DP178 are identified in a variety of viral and nonviral organisms, and in examples wherein a number of such identified peptides derived from several different viral systems are demonstrated to exhibit antiviral activity.

Membrane fusion is a ubiquitous cell biological process (for a review, see White, J. M., 1992, Science 258:917-924). Fusion events which mediate cellular housekeeping functions, such as endocytosis, constitutive secretion, and recycling of membrane components, occur continuously in all eukaryotic cells.

Additional fusion events occur in specialized cells. Intracellularly, for example, fusion events are involved in such processes as occur in regulated exocytosis of hormones, enzymes and neurotransmitters. Intercellularly, such fusion events feature prominently in, for example, sperm-egg fusion and myoblast fusion.

Fusion events are also associated with disease states. For example, fusion events are involved in the formation of giant cells during inflammatory reactions, the entry of all enveloped viruses into cells, and, in the case of human immunodeficiency virus (HIV), for example, are responsible for the virally induced cell-cell fusion which leads to cell death.

The human immunodeficiency virus (HIV) has been implicated as the primary cause of the slowly degenerative immune system disease termed acquired immune deficiency syndrome (AIDS) (Barre-Sinoussi, F. et al., 1983, Science 220:868-870; Gallo, R. et al., 1984, Science 224:500-503). There are at least two distinct types of HIV: HIV-1 (Barre-Sinoussi, F. et al., 1983, Science 220:868-870; Gallo R. et al., 1984, Science 224:500-503) and HIV-2 (Clavel, F. et al., 1986, Science 233:343-346; Guyader, M. et al., 1987, Nature 326:662-669). Further, a large amount of genetic heterogeneity exists within populations of each of these types. Infection of human CD-4.sup.+ T-lymphocytes with an HIV virus leads to depletion of the cell type and eventually to opportunistic infections, neurological dysfunctions, neoplastic growth, and ultimately death.

HIV is a member of the lentivirus family of retroviruses (Teich, N. et al., 1984, RNA Tumor Viruses, Weiss, R. et al., eds., CSH-Press, pp. 949-956). Retroviruses are small enveloped viruses that contain a diploid, single-stranded RNA genome, and replicate via a DNA intermediate produced by a virally-encoded reverse transcriptase, an RNA-dependent DNA polymerase (Varmus, H., 1988, Science 240:1427-1439). Other retroviruses include, for example, oncogenic viruses such as human T-cell leukemia viruses (HTLV-I,-II,-III), and feline leukemia virus.

The HIV viral particle consists of a viral core, composed of capsid proteins, that contains the viral RNA genome and those enzymes required for early replicative events. Myristylated Gag protein forms an outer viral shell around the viral core, which is, in turn, surrounded by a lipid membrane enveloped derived from the infected cell membrane. The HIV enveloped surface glycoproteins are synthesized as a single 160 Kd precursor protein which is cleaved by a cellular protease during viral budding into two glycoproteins, gp41 and gp120. gp41 is a transmembrane protein and gp120 is an extracellular protein which remains non-covalently associated with gp41, possibly in a trimeric or multimeric form (Hammarskjold, M. and Rekosh, D., 1989, Biochem. Biophys. Acta 989:269-280).

HIV is targeted to CD-4.sup.+ cells because the CD-4 cell surface protein acts as the cellular receptor for the HIV-1 virus (Dalgleish, A. et al., 1984, Nature 312:763-767; Klatzmann et al., 1984, Nature 312:767-768; Maddon et al., 1986, Cell 47:333-348). Viral entry into cells is dependent upon gp120 binding the cellular CD-4.sup.+ receptor molecules (McDougal, J. S. et al., 1986, Science 231:382-385; Maddon, P. J. et al., 1986, Cell 47:333-348) and thus explains HIV's tropism for CD-4.sup.+ cells, while gp41 anchors the enveloped glycoprotein complex in the viral membrane.

HIV infection is pandemic and HIV associated diseases represent a major world health problem. Although considerable effort is being put into the successful design of effective therapeutics, currently no curative anti-retroviral drugs against AIDS exist. In attempts to develop such drugs, several stages of the HIV life cycle have been considered as targets for therapeutic intervention (Mitsuya, H. et al., 1991, FASEB J. 5:2369-2381). For example, virally encoded reverse transcriptase has been one focus of drug development. A number of reverse-transcriptase-targeted drugs, including 2',3'-dideoxynucleoside analogs such as AZT, ddI, ddC, and d4T have been developed which have been shown to been active against HIV (Mitsuya, H. et al., 1991, Science 249:1533-1544). While beneficial, these nucleoside analogs are not curative, probably due to the rapid appearance of drug resistant HIV mutants (Lander, B. et al., 1989, Science 243:1731-1734). In addition, the drugs often exhibit toxic side effects such as bone marrow suppression, vomiting, and liver function abnormalities.

Attempts are also being made to develop drugs which can inhibit viral entry into the cell, the earliest stage of HIV infection. Here, the focus has thus far been on CD4, the cell surface receptor for HIV. Recombinant soluble CD4, for example, has been shown to inhibit infection of CD-4.sup.+ T-cells by some HIV-1 strains (Smith, D. H. et al., 1987, Science 238:1704-1707). Certain primary HIV-1 isolates, however, are relatively less sensitive to inhibition by recombinant CD-4 (Daar, E. et al., 1990, Proc. Natl. Acad. Sci. USA 87:6574-6579). In addition, recombinant soluble CD-4 clinical trials have produced inconclusive results (Schooley, R. et al., 1990, Ann. Int. Med. 112:247-253; Kahn, J. O. et al., 1990, Ann. Int. Med. 112:254-261; Yarchoan, R. et al., 1989, Proc. Vth Int. Conf. on AIDS, p. 564, MCP 137).

The late stages of HIV replication, which involve crucial virus-specific secondary processing of certain viral proteins, have also been suggested as possible anti-HIV drug targets. Late stage processing is dependent on the activity of a viral protease, and drugs are being developed which inhibit this protease (Erickson, J., 1990, Science 249:527-533). The clinical outcome of these candidate drugs is still in question.

Attention is also being given to the development of vaccines for the treatment of HIV infection. The HIV-1 enveloped proteins (gp160, gp120, gp41) have been shown to be the major antigens for anti-HIV antibodies present in AIDS patients (Barin, et al., 1985, Science 228:1094-1096). Thus far, therefore, these proteins seem to be the most promising candidates to act as antigens for anti-HIV vaccine development. To this end, several groups have begun to use various portions of gp160, gp120, and/or gp41 as immunogenic targets for the host immune system. See for example, Ivanoff, L. et al., U.S. Pat. No. 5,141,867; Saith, G. et al., WO 92/22,654; Shafferman, A., WO 91/09,872; Formoso, C. et al., WO 90/07,119. Clinical results concerning these candidate vaccines, however, still remain far in the future.

Thus, although a great deal of effort is being directed to the design and testing of anti-retroviral drugs, a truly effective, non-toxic treatment is still needed.

The present invention relates, first, to DP178 (SEQ ID:1), a 36-amino acid synthetic peptide corresponding to amino acids 638 to 673 of the transmembrane protein (TM) gp41 from the HIV-1 isolate LAI (HIV-1.sub.LAI), which exhibits potent anti-HIV-1 activity. As evidenced by the Example presented below, in Section 6, the DP178 (SEQ ID:1) antiviral activity is so high that, on a weight basis, no other known anti-HIV agent is effective at concentrations as low as those at which DP178 (SEQ ID:1) exhibits its inhibitory effects.

The invention further relates to those portions and analogs of DP178 which also show such antiviral activity, and/or show anti-membrane fusion capability, or an ability to modulate intracellular processes involving coiled-coil peptide structures. The term "DP178 analog" refers to a peptide which contains an amino acid sequence corresponding to the DP178 peptide sequence present within the gp41 protein of HIV-1.sub.LAI, but found in viruses and/or organisms other than HIV-1.sub.LAI. Such DP178 analog peptides may, therefore, correspond to DP178-like amino acid sequences present in other viruses, such as, for example, enveloped viruses, such as retroviruses other than HIV-1.sub.LAI, as well as non-enveloped viruses. Further, such analogous DP178 peptides may also correspond to DP178-like amino acid sequences present in nonviral organisms.

The invention further relates to peptides DP107 analogs. DP107 is a peptide corresponding to amino acids 558-595 of the HIV-1.sub.LAI transmembrane protein (TM) gp41. The term "DP107 analog" as used herein refers to a peptide which contains an amino acid sequence corresponding to the DP107 peptide sequence present within the gp41 protein of HIV-1.sub.LAI, but found in viruses and organisms other than HIV-1.sub.LAI. Such DP107 analog peptides may, therefore, correspond to DP107-like amino acid sequences present in other viruses, such as, for example, enveloped viruses, such as retroviruses other than HIV-1.sub.LAI, as well as non-enveloped viruses. Further, such DP107 analog peptides may also correspond to DP107-like amino acid sequences present in nonviral organisms.

Further, the peptides of the invention include DP107 analog and DP178 analog peptides having amino acid sequences recognized or identified by the 107x178x4, ALLMOTI5 and/or PLZIP search motifs described herein.

The peptides of the invention may, for example, exhibit antifusogenic activity, antiviral activity, and/or may have the ability to modulate intracellular processes which involve coiled-coil peptide structures. With respect to the antiviral activity of the peptides of the invention, such an antiviral activity includes, but is not limited to the inhibition of HIV transmission to uninfected CD-4.sup.+ cells. Additionally, the antifusogenic capability, antiviral activity or intracellular modulatory activity of the peptides of the invention merely requires the presence of the peptides of the invention, and, specifically, does not require the stimulation of a host immune response directed against such peptides.

The peptides of the invention may be used, for example, as inhibitors of membrane fusion-associated events, such as, for example, the inhibition of human and non-human retroviral, especially HIV, transmission to uninfected cells. It is further contemplated that the peptides of the invention may be used as modulators of intracellular events involving coiled-coil peptide structures.

The peptides of the invention may, alternatively, be used to identify compounds which may themselves exhibit antifusogenic, antiviral, or intracellular modulatory activity. Additional uses include, for example, the use of the peptides of the invention as organism or viral type and/or subtype-specific diagnostic tools.

The terms "antifusogenic" and "anti-membrane fusion", as used herein, refer to an agent's ability to inhibit or reduce the level of membrane fusion events between two or more moieties relative to the level of membrane fusion which occurs between said moieties in the absence of the peptide. The moieties may be, for example, cell membranes or viral structures, such as viral envelopes or pili. The term "antiviral", as used herein, refers to the compound's ability to inhibit viral infection of cells, via, for example, cell-cell fusion or free virus infection. Such infection may involve membrane fusion, as occurs in the case of enveloped viruses, or some other fusion event involving a viral structure and a cellular structure (e.g., such as the fusion of a viral pilus and bacterial membrane during bacterial conjugation).

It is also contemplated that the peptides of the invention may exhibit the ability to modulate intracellular events involving coiled-coil peptide structures. "Modulate", as used herein, refers to a stimulatory or inhibitory effect on the intracellular process of interest relative to the level or activity of such a process in the absence of a peptide of the invention.

Embodiments of the invention are demonstrated below wherein an extremely low concentration of DP178 (SEQ ID:1), and very low concentrations of a DP178 homolog (SEQ ID:3) are shown to be potent inhibitors of HIV-1 mediated CD-4.sup.+ cell-cell fusion (i.e., syncytial formation) and infection of CD-4.sup.+ cells by cell-free virus. Further, it is shown that DP178 (SEQ ID:1) is not toxic to cells, even at concentrations 3 logs higher than the inhibitory DP-178 (SEQ ID:1) concentration.

The present invention is based, in part, on the surprising discovery that the DP107 and DP178 domains of the HIV gp41 protein non-covalently complex with each other, and that their interaction is required for the normal infectivity of the virus. This discovery is described in the Example presented, below, in Section 8. The invention, therefore, further relates to methods for identifying antifusogenic, including antiviral, compounds that disrupt the interaction between DP107 and DP178, and/or between DP107-like and DP178-like peptides.

Additional embodiments of the invention (specifically, the Examples presents in Sections 9-16 and 19-25, below) are demonstrated, below, wherein peptides, from a variety of viral and nonviral sources, having structural and/or amino acid motif similarity to DP107 and DP178 are identified, and search motifs for their identification are described. Further, Examples (in Sections 17, 18, 25-29) are presented wherein a number of the peptides of the invention are demonstrated exhibit substantial antiviral activity or activity predictive of antiviral activity.

Peptides are defined herein as organic compounds comprising two or more amino acids covalently joined by peptide bonds. Peptides may be referred to with respect to the number of constituent amino acids, i.e., a dipeptide contains two amino acid residues, a tripeptide contains three, etc. Peptides containing ten or fewer amino acids may be referred to as oligopeptides, while those with more than ten amino acid residues are polypeptides. Such peptides may also include any of the modifications and additional amino and carboxy groups as are described herein.

Peptide sequences defined herein are represented by one-letter symbols for amino acid residues as follows:

A (alanine)

R (arginine)

N (asparagine)

D (aspartic acid)

C (cysteine)

Q (glutamine)

E (glutamic acid)

G (glycine)

H (histidine)

I (isoleucine)

L (leucine)

K (lysine)

M (methionine)

F (phenylalanine)

P (proline)

S (serine)

T (threonine)

W (tryptophan)

Y (tyrosine)

V (valine)

FIG. 1. Amino acid sequence of DP178 (SEQ ID:1) derived from HIV.sub.LAI ; DP178 homologs derived from HIV-1.sub.SF2 (DP-185; SEQ ID:3), HIV-1.sub.RF (SEQ ID:4), and HIV-1.sub.MN (SEQ ID:5); DP178 homologs derived from amino acid sequences of two prototypic HIV-2 isolates, namely, HIV-2.sub.rod (SEQ ID:6) and HIV-2.sub.NIHZ (SEQ ID:7); control peptides: DP-180 (SEQ ID:2), a peptide incorporating the amino acid residues of DP178 in a scrambled sequence; DP-118 (SEQ ID:10) unrelated to DP178, which inhibits HIV-1 cell free virus infection; DP-125 (SEQ ID:8), unrelated to DP178, also inhibits HIV-1 cell free virus infection; DP-116 (SEQ ID:9), unrelated to DP178, is negative for inhibition of HIV-1 infection when tested using a cell-free virus infection assay. Throughout the figures, the one letter amino acid code is used.

FIG. 2. Inhibition of HIV-1 cell-free virus infection by synthetic peptides. IC.sub.50 refers to the concentration of peptide that inhibits RT production from infected cells by 50% compared to the untreated control. Control: the level of RT produced by untreated cell cultures infected with the same level of virus as treated cultures.

FIG. 3. Inhibition of HIV-1 and HIV-2 cell-free virus infection by the synthetic peptide DP178 (SEQ ID:1). IC.sub.50 : concentration of peptide that inhibits RT production by 50% compared to the untreated control. Control: Level of RT produced by untreated cell cultures infected with the same level of virus as treated cultures.

FIGS. 4A-4B. Fusion Inhibition Assays. FIG. 4A: DP178 (SEQ ID:1) inhibition of HIV-1 prototypic isolate-mediated syncytial formation; data represents the number of virus-induced syncytial per cell. FIG. 4B: DP-180 (SEQ ID:2) represents a scrambled control peptide; DP-185 (SEQ ID:3) represents a DP178 homolog derived from HIV-1.sub.SF2 isolate; Control, refers to the number of syncytial produced in the absence of peptide.

FIG. 5. Fusion inhibition assay: HIV-1 vs. HIV-2. Data represents the number of virus-induced syncytial per well. ND: not done.

FIG. 6. Cytotoxicity study of DP178 (SEQ ID:1) and DP-116 (SEQ ID:9) on CEM cells. Cell proliferation data is shown.

FIG. 7. Schematic representation of HIV-gp41 and maltose binding protein (MBP)-gp41 fusion proteins. DP107 and DP178 are synthetic peptides based on the two putative helices of gp41. The letter P in the DP107 boxes denotes an Ile to Pro mutation at amino acid number 578. Amino acid residues are numbered according to Meyers et al., "Human Retroviruses and AIDS", 1991, Theoret. Biol. and Biophys. Group, Los Alamos Natl. Lab., Los Alamos, NM. The proteins are more fully described, below, in Section 8.1.1.

FIG. 8. A point mutation alters the conformation and anti-HIV activity of M41.

FIG. 9. Abrogation of DP178 anti-HIV activity. Cell fusion assays were carried out in the presence of 10 nM DP178 and various concentrations of M41.DELTA.178 or M41P.DELTA.178.

FIG. 10. Binding of DP178 to leucine zipper of gp41 analyzed by FAb-D ELISA.

FIGS. 11A-B. Models for a structural transition in the HIV-1 TM protein. Two models are proposed which indicate a structural transition from a native oligomer to a fusogenic state following a trigger event (possibly gp120 binding to CD4). Common features of both models include (1) the native state is held together by noncovalent protein-protein interactions to form the heterodimer of gp120/41 and other interactions, principally though gp41 interactive sites, to form homo-oligomers on the virus surface of the gp120/41 complexes; (2) shielding of the hydrophobic fusogenic peptide at the N-terminus (F) in the native state; and (3) the leucine zipper domain (DP107) exists as a homo-oligomer coiled coil only in the fusogenic state. The major differences in the two models include the structural state (native or fusogenic) in which the DP107 and DP178 domains are complexed to each other. In the first model (FIG. 11A) this interaction occurs in the native state and in the second (FIG. 11B), it occurs during the fusogenic state. When triggered, the fusion complex in the model depicted in (A) is generated through formation of coiled-coil interactions in homologous DP107 domains resulting in an extended .alpha.-helix. This conformational change positions the fusion peptide for interaction with the cell membrane. In the second model (FIG. 11B), the fusogenic complex is stabilized by the association of the DP178 domain with the DP107 coiled-coil.

FIG. 12. Motif design using heptad repeat positioning of amino acids of known coiled-coils [GCN4:(SEQ ID NO:84); C-FOS:(SEQ ID NO:85); C-JUN:(SEQ ID NO:86); C-MYC:(SEQ ID NO:87); FLU LOOP 36:(SEQ ID NO:88)].

FIG. 13. Motif design using proposed heptad repeat positioning of amino acids of DP107 and DP178.

FIG. 14. Hybrid motif design crossing GCN4 and DP107.

FIG. 15. Hybrid motif design crossing GCN4 and DP178 (SEQ ID NO:1).

FIG. 16. Hybrid motif design 107x178x4, crossing DP107 and DP178. This motif was found to be the most consistent at identifying relevant DP107-like and DP178-like peptide regions.

FIG. 17. Hybrid motif design crossing GCN4, DP107, and DP178.

FIG. 18. Hybrid motif design ALLMOTI5 crossing GCN4, DP107, DP178, c-Fos c-Jun, c-Myc, and Flu Loop 36.

FIG. 19. PLZIP motifs designed to identify N-terminal proline-leucine zipper motifs.

FIG. 20. Search results for HIV-1 (BRU isolate) enveloped protein gp41 (SEQ ID NO:90). Sequence search motif designations: Spades (): 107x178x4; Hearts (.heart.) ALLMOTI5; Clubs (): PLZIP; Diamonds (.diamond-solid.): transmembrane region (the putative transmembrane domains were identified using a PC/Gene program designed to search for such peptide regions). Asterisk (*): Lupas method. The amino acid sequences identified by each motif are bracketed by the respective characters. Representative sequences chosen based on 107x178x4 searches are underlined and in bold. DP107 and DP178 sequences are marked, and additionally double-underlined and italicized.

FIG. 21. Search results for human respiratory syncytial virus (RSV) strain A2 fusion glycoprotein F1 (SEQ ID NO:91). Sequence search motif designations are as in FIG. 20.

FIG. 22. Search results for simian immunodeficiency virus (SIV) enveloped protein gp41 (AGM3 isolate). (SEQ ID NO:92) Sequence search motif designations are as in FIG. 20.

FIG. 23. Search results for canine distemper virus (strain Onderstepoort) fusion glycoprotein 1 (SEQ ID NO:93). Sequence search motif designations are as in FIG. 20.

FIG. 24. Search results for newcastle disease virus (strain Australia-Victoria/32) fusion glycoprotein F1 (SEQ ID NO:91). Sequence search motif designations are as in FIG. 20.

FIG. 25. Search results for human parainfluenza 3 virus (strain NIH 47885) fusion glycoprotein F1 (SEQ ID NO:95). Sequence search motif designations are as in FIG. 20.

FIG. 26. Search results for influenza A virus (strain A/AICHI/2/68) hemagglutinin precursor HA2 (SEQ ID NO:96). Sequence search designations are as in FIG. 20.

FIGS. 27A-F. Respiratory Syncytial Virus (RSV) peptide (SEQ ID NO:97) antiviral and circular dichroism data. FIGS. 27A-C: Peptides derived from the F2 DP178/DP107-like region [T-22:(SEQ ID NO:121); T-68:(SEQ ID NO:122); T-334:(SEQ ID NO:123); T-371:(SEQ ID NO:124); T-372:(SEQ ID NO:125); T-373:(SEQ ID NO:126); T-374:(SEQ ID NO:127); T-375:(SEQ ID NO:128); T-575:(SEQ ID NO:129)]. Antiviral and CD data. FIGS. 27D-F: Peptides derived from the F1 DP107-like region [F1-107:(SEQ ID NO:98); T-12:(SEQ ID NO:130); T-13:(SEQ ID NO:131); T-15:(SEQ ID NO:132); T-19:(SEQ ID NO:133); T-28:(SEQ ID NO:134); T-30:(SEQ ID NO:135); T-66:(SEQ ID NO:136); T-576:(SEQ ID NO:137)]. Peptide and CD data.

Antiviral activity (AV) is represented by the following qualitative symbols:

"-", negative antiviral activity;

"+/-", antiviral activity at greater than 100 .mu.g/ml;

"+", antiviral activity at between 50-100 .mu.g/ml;

"++", antiviral activity at between 20-50 .mu.g/ml;

"+++", antiviral activity at between 1-20 .mu.g/ml;

"++++", antiviral activity at <1 .mu.g/ml.

CD data, referring to the level of helicity is represented by the following qualitative symbol:

"-", no helicity;

"+", 25-50% helicity;

"++", 50-75% helicity;

"+++", 75-100% helicity.

IC.sub.50 refers to the concentration of peptide necessary to produce only 50% of the number of syncytial relative to infected control cultures containing no peptide. IC.sub.50 values were obtained using purified peptides only.

FIGS. 28A-C. Respiratory Syncytial Virus (RSV) DP178-like region (F1) peptide antiviral and CD data [F1-178:(SEQ ID NO:99); T-71:(SEQ ID NO:138); T-384:(SEQ ID NO:139); T-616:(SEQ ID NO:140); T-617:(SEQ ID NO:141); T-662:(SEQ ID NO:142); T-665:(SEQ ID NO:143); T-671:(SEQ ID NO:144); T-730:(SEQ ID NO:145)]. Antiviral symbols, CD symbols, and IC.sub.50 are as in FIGS. 27A-F. IC.sub.50 values were obtained using purified peptides only.

FIGS. 29A-E. Peptides derived from the HPIV3 F1 DP107-like region. Peptide antiviral and CD data [HPF1 107:(SEQ ID NO:100); T-42:(SEQ ID NO:146); T-39:(SEQ ID NO:147); T-40:(SEQ ID NO:148); T-45:(SEQ ID NO:149); T-46:(SEQ ID NO:150); T-582:(SEQ ID NO:151)]. Antiviral symbols, CD symbols, and IC.sub.50 are as in FIGS. 27A-F. Purified peptides were used to obtain IC.sub.50 values, except where the values are marked by an asterisk (*), in which cases, the IC.sub.50 values were obtained using a crude peptide preparation.

FIGS. 30A-C. Peptides derived from the HPIV3 F1 DP178-like region. Peptide antiviral and CD data [HPF3 178:(SEQ ID NO:101); T-269:(SEQ ID NO:152); T-626:(SEQ ID NO:153); T-383:(SEQ ID NO:154); T-577:(SEQ ID NO:155); T-578:(SEQ ID NO:156); T-579:(SEQ ID NO:157)]. Antiviral symbols, CD symbols, and IC.sub.50 are as in FIGS. 27A-F. Purified peptides were used to obtain IC.sub.50 values, except where the values are marked by an asterisk (*), in which cases, the IC.sub.50 values were obtained using a crude peptide preparation.

FIG. 31. Motif search results for simian immunodeficiency virus (SIV) isolate MM251, enveloped polyprotein gp41 (SEQ ID NO:102). Sequence search designations are as in FIG. 20.

FIG. 32. Motif search results for Epstein-Barr Virus (Strain B95-8), glycoprotein gp110 precursor (designated gp115). BALF4 (SEQ ID NO:103). Sequence search designations are as in FIG. 20.

FIG. 33. Motif search results for Epstein-Barr Virus (Strain B95-8), BZLF1 trans-activator protein (designated EB1 or Zebra) (SEQ ID NO:104). Sequence search designations are as in FIG. 20. Additionally, "@" refers to a well known DNA binding domain and "+" refers to a well known dimerization domain, as defined by Flemington and Speck (Flemington, E. and Speck, S. H., 1990, Proc. Natl. Acad. Sci. USA 87:9459-9463).

FIG. 34. Motif search results for measles virus (strain Edmonston), fusion glycoprotein F1 (SEQ ID NO:105). Sequence search designations are as in FIG. 20.

FIG. 35. Motif search results for Hepatitis B Virus (Subtype AYW), major surface antigen precursor S. (SEQ ID NO:106) Sequence search designations are as in FIG. 20.

FIG. 36. Motif search results for simian Mason-Pfizer monkey virus, enveloped (TM) protein gp20 (SEQ ID NO:107). Sequence search designations are as in FIG. 20.

FIG. 37. Motif search results for Pseudomonas aerginosa, fimbrial protein (SEQ ID NO:110) (Pilin) (SEQ ID NO:108). Sequence search designations are as in FIG. 20.

FIG. 38. Motif search results for Neisseria gonorrhoeae fimbrial protein (Pilin) (SEQ ID NO:109). Sequence search designations are as in FIG. 20.

FIG. 39. Motif search results for Hemophilus influenzae fimbrial protein. Sequence search designations are as in FIG. 20.

FIG. 40. Motif search results for Staphylococcus aureus, toxic shock syndrome toxin-1 (SEQ ID NO:111). Sequence search designations are as in FIG. 20.

FIG. 41. Motif search results for Staphylococcus aureus enterotoxin Type E (SEQ ID NO:112). Sequence search designations are as in FIG. 20.

FIG. 42. Motif search results for Staphylococcus aureus enterotoxin A (SEQ ID NO:113). Sequence search designations are as in FIG. 20.

FIG. 43. Motif search results for Escherichia coli, heat labile enterotoxin A (SEQ ID NO:114). Sequence search designations are as in FIG. 20.

FIG. 44. Motif search results for human c-fos proto-oncoprotein (SEQ ID NO:115). Sequence search designations are as in FIG. 20.

FIG. 45. Motif search results for human lupus KU autoantigen protein P70 (SEQ ID NO:116). Sequence search designations are as in FIG. 20.

FIG. 46. Motif search results for human zinc finger protein 10 (SEQ ID NO:117). Sequence search designations are as in FIG. 20.

FIGS. 47A-B. Measles virus (MeV) fusion protein DP178-like region antiviral and CD data [T-252A0:(SEQ ID NO:118); T-268A0:(SEQ ID NO:119)]. Antiviral symbols, CD symbols, and IC.sub.50 are as in FIGS. 27A-F. IC.sub.50 values were obtained using purified peptides.

FIGS. 48A-B. Simian immunodeficiency virus (SIV) TM (fusion) protein DP178-like region antiviral data (SEQ ID NO:120). Antiviral symbols are as in FIGS. 27A-F "NT", not tested.

FIGS. 49A-L. DP178-derived peptide antiviral data [(SEQ ID NO:158); T50:(SEQ ID NO:159); (SEQ ID NO:160); T234:(SEQ ID NO:161); T235:(SEQ ID NO:162); T570:(SEQ ID NO:163); T381:(SEQ ID NO:164); T677:(SEQ ID NO:165); T589:(SEQ ID NO:166); T590:(SEQ ID NO:167); T591:(SEQ ID NO:168); T270:(SEQ ID NO:169); T271:(SEQ ID NO:170); T273:(SEQ ID NO:171); T608:(SEQ ID NO:172); T609:(SEQ ID NO:173); T610:(SEQ ID NO:174); T611:(SEQ ID NO:175); T612:(SEQ ID NO:176); T595:(SEQ ID NO:177); T95:(SEQ ID NO:178); T96:(SEQ ID NO:179); T97:(SEQ ID NO:180); T98:(SEQ ID NO:181); T99:(SEQ ID NO:182); T103:(SEQ ID NO:183); T212:(SEQ ID NO:184); T213:(SEQ ID NO:185); T214:(SEQ ID NO:186); T215:(SEQ ID NO:187); T216:(SEQ ID NO:188); T229:(SEQ ID NO:189); T230:(SEQ ID NO:190); T231:(SEQ ID NO:191); T379:(SEQ ID NO:192); T701:(SEQ ID NO:193); T702:(SEQ ID NO:194); T703:(SEQ ID NO:195); T704:(SEQ ID NO:196); T705:(SEQ ID NO:197); T706:(SEQ ID NO:198); T156:(SEQ ID NO:199); T90:(SEQ ID NO:200)]. The peptides listed herein were derived from the region surrounding the HIV-1 BRU isolate DP178 region (e.g., gp41 amino acid residues 615-717).

In instances where peptides contained DP178 point mutations, the mutated amino acid residues are shown with a shaded background. In instances in which the test peptide has had an amino and/or carboxy-terminal group added or removed (apart from the standard amido- and acetyl- blocking groups found on such peptides), such modifications are indicated. FIGS. 49A-D: The column to the immediate right of the name of the test peptide indicates the size of the test peptide and points out whether the peptide is derived from a one amino acid peptide "walk" across the DP178 region. The next column to the right indicates whether the test peptide contains a point mutation, while the column to its right indicates whether certain amino acid residues have been added to or removed from the DP178-derived amino acid sequence. FIGS. 49E-H: The column to the immediate right of the test peptide name indicates whether the peptide represents a DP178 truncation, the next column to the right points out whether the peptide contains a point mutation, and the column to its right indicates whether the peptide contains amino acids which have been added to or removed from the DP178 sequence itself. FIGS. 49I-L: The column to the immediate right of the test peptide name indicates whether the test peptide contains a point mutation, while the column to its right indicates whether amino acid residues have been added to or removed from the DP178 sequence itself. IC.sub.50 is as defined in FIGS. 27A-F, and IC.sub.50 values were obtained using purified peptides except where marked with an asterisk (*), in which case the IC.sub.50 was obtained using a crude peptide preparation.

FIGS. 50A-B. DP107 and DP107 gp41 region truncated peptide antiviral data (SEQ ID NO:201). IC.sub.50 as defined in FIGS. 27A-F, and IC.sub.50 values were obtained using purified peptides except where marked with an asterisk (*), in which case the IC.sub.50 was obtained using a crude peptide preparation.

FIGS. 51A-C. Epstein-Barr virus Strain B95-8 BZLF1 DP178/DP107 analog region peptide walks and electrophoretic mobility shift assay results. The peptides [173-219:(SEQ ID NO:202); 185-230:(SEQ ID NO:203); T-446:(SEQ ID NO:204); 197-242:(SEQ ID NO:205); T-458:(SEQ ID NO:206); 209-246:(SEQ ID NO:207)] (T-423 to T-446, FIGS. 51A-B; T-447 to T-461, FIG. 51C) represent one amino acid residue "walks" through the EBV Zebra protein region from amino acid residue 173 to 246.

The amino acid residue within this region which corresponds to the first amino acid residue of each peptide is listed to the left of each peptide, while the amino acid residue within this region which corresponds to the last amino acid residue of each peptide is listed to the right of each peptide. The length of each test peptide is listed at the far right of each line, under the heading "Res".

"ACT" refers to a test peptide's ability to inhibit Zebra binding to its response element. "+" refers to a visible, but incomplete, abrogation of the response element/Zebra homodimer complex; "+++" refers to a complete abrogation of the complex; and "-" represents a lack of complex disruption.

FIGS. 52A-B. Hepatitis B virus subtype AYW major surface antigen precursor S protein DP178/DP107 analog region and peptide walks. 52A depicts Domain I (SEQ ID NO:208) (S protein amino acid residues 174-219), which contains a potential DP178/DP107 analog region. In addition, peptides are listed which represent one amino acid peptide "walks" through domain I. 52B depicts Domain II (SEQ ID NO:209) (S protein amino acid residues 233-290), which contains a second potential DP178/DP107 analog region. In addition, peptides are listed which represent one amino acid peptide "walks" through domain II.

Described herein are peptides which may exhibit antifusogenic activity, antiviral capability, and/or the ability to modulate intracellular processes involving coiled-coil peptide structures. The peptides described include, first, DP178 (SEQ ID NO:1), a gp41-derived 36 amino acid peptide and fragments and analogs of DP178.

In addition, the peptides of the invention described herein include peptides which are DP107 analogs. DP107 (SEQ ID NO:99) is a 38 amino acid peptide corresponding to residues 558 to 595 of the HIV-1.sub.LAI transmembrane (TM) gp41 protein. Such DP107 analogs may exhibit antifusogenic capability, antiviral activity or an ability to modulate intracellular processes involving coiled-coil structures.

Further, peptides of the invention include DP107 and DP178 are described herein having amino acid sequences recognized by the 107x178x4, ALLMOTI5, and PLZIP search motifs. Such motifs are also discussed.

Also described here are antifusogenic, antiviral, intracellular modulatory, and diagnostic uses of the peptides of the invention. Further, procedures are described for the use of the peptides of the invention for the identification of compounds exhibiting antifusogenic, antiviral or intracellular modulatory activity.

While not limited to any theory of operation, the following model is proposed to explain the potent anti-HIV activity of DP178, based, in part, on the experiments described in the Examples, infra. In the HIV protein, gp41, DP178 corresponds to a putative .alpha.-helix region located in the C-terminal end of the gp41 ectodomain, and appears to associate with a distal site on gp41 whose interactive structure is influenced by the leucine zipper motif, a coiled-coil structure, referred to as DP107. The association of these two domains may reflect a molecular linkage or "molecular clasp" intimately involved in the fusion process. It is of interest that mutations in the C-terminal .alpha.-helix motif of gp41 (i.e., the D178 domain) tend to enhance the fusion ability of gp41, whereas mutations in the leucine zipper region (i.e., the DP107 domain) decrease or abolish the fusion ability of the viral protein. It may be that the leucine zipper motif is involved in membrane fusion while the C-terminal .alpha.-helix motif serves as a molecular safety to regulate the availability of the leucine zipper during virus-induced membrane fusion.

On the basis of the foregoing, two models are proposed of gp41-mediated membrane fusion which are schematically shown in FIGS. 11A-B. The reason for proposing two models is that the temporal nature of the interaction between the regions defined by DP107 and DP178 cannot, as yet, be pinpointed. Each model envisions two conformations for gp41--one in a "native" state as it might be found on a resting virion. The other in a "fusogenic" state to reflect conformational changes triggered following binding of gp120 to CD4 and just prior to fusion with the target cell membrane. The strong binding affinity between gp120 and CD4 may actually represent the trigger for the fusion process obviating the need for a pH change such as occurs for viruses that fuse within intracellular vesicles. The two major features of both models are: (1) the leucine zipper sequences (DP107) in each chain of oligomeric enveloped are held apart in the native state and are only allowed access to one another in the fusogenic state so as to form the extremely stable coiled-coils, and (2) association of the DP178 and DP107 sites as they exist in gp41 occur either in the native or fusogenic state. FIG. 11A depicts DP178/DP107 interaction in the native state as a molecular clasp. On the other hand, if one assumes that the most stable form of the enveloped occurs in the fusogenic state, the model in FIG. 11B can be considered.

When synthesized as peptides, both DP107 and DP178 are potent inhibitors of HIV infection and fusion, probably by virtue of their ability to form complexes with viral gp41 and interfere with its fusogenic process; e.g., during the structural transition of the viral protein from the native structure to the fusogenic state, the DP178 and DP107 peptides may gain access to their respective binding sites on the viral gp41, and exert a disruptive influence. DP107 peptides which demonstrate anti-HIV activity are described in Applicants' co-pending application Ser. No. 08/264,531, filed Jun. 23, 1994, which is incorporated by reference herein in its entirety.

As shown in the Examples, infra, a truncated recombinant gp41 protein corresponding to the ectodomain of gp41 containing both DP107 and DP178 domains (excluding the fusion peptide, transmembrane region and cytoplasmic domain of gp41) did not inhibit HIV-1 induced fusion. However, when a single mutation was introduced to disrupt the coiled-coil structure of the DP107 domain--a mutation which results in a total loss of biological activity of DP107 peptides--the inactive recombinant protein was transformed to an active inhibitor of HIV-1 induced fusion. This transformation may result from liberation of the potent DP178 domain from a molecular clasp with the leucine zipper, DP107 domain.

For clarity of discussion, the invention will be described primarily for DP178 peptide inhibitors of HIV. However, the principles may be analogously applied to other viruses, both enveloped and nonenveloped, and to other non-viral organisms.

The DP178 peptide (SEQ ID:1) of the invention corresponds to amino acid residues 638 to 673 of the transmembrane protein gp41 from the HIV-1.sub.LAI isolate, and has the 36 amino acid sequence (reading from amino to carboxy terminus):

NH.sub.2 -YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-COOH (SEQ ID:1)

In addition to the full-length DP178 (SEQ ID:1) 36-mer, the peptides of the invention may include truncations of the DP178 (SEQ ID:1) peptide which exhibit antifusogenic activity, antiviral activity and/or the ability to modulate intracellular processes involving coiled-coil peptide structures. Truncations of DP178 (SEQ ID:1) peptides may comprise peptides of between 3 and 36 amino acid residues (i.e., peptides ranging in size from a tripeptide to a 36-mer polypeptide), as shown in Tables I and IA, below. Peptide sequences in these tables are listed from amino (left) to carboxy (right) terminus. "XI" may represent an amino group (--NH.sub.2) and "Z" may represent a carboxyl (--COOH) group. Alternatively, "X" may represent a hydrophobic group, including but not limited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. Further, "Z" may represent an amido group; a T-butoxycarbonyl group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. A preferred "X" or "Z" macromolecular group is a peptide group.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

The peptides of the invention also include DP178-like peptides. "DP178-like", as used herein, refers, first, to DP178 and DP178 truncations which contain one or more amino acid substitutions, insertions and/or deletions. Second, "DP-178-like" refers to peptide sequences identified or recognized by the ALLMOTI5, 107x178x4 and PLZIP search motifs described herein, having structural and/or amino acid motif similarity to DP178. The DP178-like peptides of the invention may exhibit antifusogenic or antiviral activity, or may exhibit the ability to modulate intracellular processes involving coiled-coil peptides. Further, such DP178-like peptides may possess additional advantageous features, such as, for example, increased bioavailability, and/or stability, or reduced host immune recognition.

HIV-1 and HIV-2 enveloped proteins are structurally distinct, but there exists a striking amino acid conservation within the DP178-corresponding regions of HIV-1 and HIV-2. The amino acid conservation is of a periodic nature, suggesting some conservation of structure and/or function. Therefore, one possible class of amino acid substitutions would include those amino acid changes which are predicted to stabilize the structure of the DP178 peptides of the invention. Utilizing the DP178 and DP178 analog sequences described herein, the skilled artisan can readily compile DP178 consensus sequences and ascertain from these, conserved amino acid residues which would represent preferred amino acid substitutions.

The amino acid substitutions may be of a conserved or non-conserved nature. Conserved amino acid substitutions consist of replacing one or more amino acids of the DP178 (SEQ ID:1) peptide sequence with amino acids of similar charge, size, and/or hydrophobicity characteristics, such as, for example, a glutamic acid (E) to aspartic acid (D) amino acid substitution. Non-conserved substitutions consist of replacing one or more amino acids of the DP178 (SEQ ID:1) peptide sequence with amino acids possessing dissimilar charge, size, and/or hydrophobicity characteristics, such as, for example, a glutamic acid (E) to valine (V) substitution.

Amino acid insertions may consist of single amino acid residues or stretches of residues. The insertions may be made at the carboxy or amino terminal end of the DP178 or DP178 truncated peptides, as well as at a position internal to the peptide. Such insertions will generally range from 2 to 15 amino acids in length. It is contemplated that insertions made at either the carboxy or amino terminus of the peptide of interest may be of a broader size range, with about 2 to about 50 amino acids being preferred. One or more such insertions may be introduced into DP178 (SEQ.ID:1) or DP178 truncations, as long as such insertions result in peptides which may still be recognized by the 107x178x4, ALLMOTI5 or PLZIP search motifs described herein, or may, alternatively, exhibit antifusogenic or antiviral activity, or exhibit the ability to modulate intracellular processes involving coiled-coil peptide structures.

Preferred amino or carboxy terminal insertions are peptides ranging from about 2 to about 50 amino acid residues in length, corresponding to gp41 protein regions either amino to or carboxy to the actual DP178 gp41 amino acid sequence, respectively. Thus, a preferred amino terminal or carboxy terminal amino acid insertion would contain gp41 amino acid sequences found immediately amino to or carboxy to the DP178 region of the gp41 protein.

Deletions of DP178 (SEQ ID:1) or DP178 truncations are also within the scope of the invention. Such deletions consist of the removal of one or more amino acids from the DP178 or DP178-like peptide sequence, with the lower limit length of the resulting peptide sequence being 4 to 6 amino acids. Such deletions may involve a single contiguous or greater than one discrete portion of the peptide sequences. One or more such deletions may be introduced into DP178 (SEQ.ID:1) or DP178 truncations, as long as such deletions result in peptides which may still be recognized by the 107x178x4, ALLMOTI5 or PLZIP search motifs described herein, or may, alternatively, exhibit antifusogenic or antiviral activity, or exhibit the ability to modulate intracellular processes involving coiled-coil peptide structures.

DP178 analogs are further described, below, in Section 5.3.

Further, the peptides of the invention include peptides having amino acid sequences corresponding to DP107 analogs. DP107 is a 38 amino acid peptide which exhibits potent antiviral activity, and corresponds to residues 558 to 595 of HIV-1.sub.LAI transmembrane (TM) gp41 protein, as shown here:

NH.sub.2 -NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-COOH

In addition to the full-length DP107 38-mer, the peptides of the invention may include truncations of the DP107 peptide which exhibit antifusogenic activity, antiviral activity and/or the ability to modulate intracellular processes involving coiled-coil peptide structures. Truncations of DP107 peptides may comprise peptides of between 3 and 38 amino acid residues (i.e., peptides ranging in size from a tripeptide to a 38-mer polypeptide), as shown in Tables II and IIA, below. Peptide sequences in these tables are listed from amino (left) to carboxy (right) terminus. "X" may represent an amino group (--NH.sub.2) and "Z" may represent a carboxyl (--COOH) group. Alternatively, "X" may represent a hydrophobic group, including but not limited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. Further, "Z" may represent an amido group; a T-butoxycarbonyl group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. A preferred "X" or "Z" macromolecular group is a peptide group.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

The peptides of the invention also include DP107-like peptides. "DP107-like", as used herein, refers, first, to DP107 and DP107 truncations which contain one or more amino acid substitutions, insertions and/or deletions. Second, "DP-107-like" refers to peptide sequences identified or recognized by the ALLMOTI5, 107x178x4 and PLZIP search motifs described herein, having structural and/or amino acid motif similarity to DP107. The DP107-like peptides of the invention may exhibit antifusogenic or antiviral activity, or may exhibit the ability to modulate intracellular processes involving coiled-coil peptides. Further, such DP107-like peptides may possess additional advantageous features, such as, for example, increased bioavailability, and/or stability, or reduced host immune recognition.

HIV-1 and HIV-2 enveloped proteins are structurally distinct, but there exists a striking amino acid conservation within the DP107-corresponding regions of HIV-1 and HIV-2. The amino acid conservation is of a periodic nature, suggesting some conservation of structure and/or function. Therefore, one possible class of amino acid substitutions would include those amino acid changes which are predicted to stabilize the structure of the DP107 peptides of the invention. Utilizing the DP107 and DP107 analog sequences described herein, the skilled artisan can readily compile DP107 consensus sequences and ascertain from these, conserved amino acid residues which would represent preferred amino acid substitutions.

The amino acid substitutions may be of a conserved or non-conserved nature. Conserved amino acid substitutions consist of replacing one or more amino acids of the DP107 peptide sequence with amino acids of similar charge, size, and/or hydrophobicity characteristics, such as, for example, a glutamic acid (E) to aspartic acid (D) amino acid substitution. Non-conserved substitutions consist of replacing one or more amino acids of the DP107 (SEQ ID:25) peptide sequence with amino acids possessing dissimilar charge, size, and/or hydrophobicity characteristics, such as, for example, a glutamic acid (E) to valine (V) substitution.

Amino acid insertions may consist of single amino acid residues or stretches of residues. The insertions may be made at the carboxy or amino terminal end of the DP107 or DP107 truncated peptides, as well as at a position internal to the peptide. Such insertions will generally range from 2 to 15 amino acids in length. It is contemplated that insertions made at either the carboxy or amino terminus of the peptide of interest may be of a broader size range, with about 2 to about 50 amino acids being preferred. One or more such insertions may be introduced into DP107 or DP107 truncations, as long as such insertions result in peptides which may still be recognized by the 107x178x4, ALLMOTI5 or PLZIP search motifs described herein, or may, alternatively, exhibit antifusogenic or antiviral activity, or exhibit the ability to modulate intracellular processes involving coiled-coil peptide structures.

Preferred amino or carboxy terminal insertions are peptides ranging from about 2 to about 50 amino acid residues in length, corresponding to gp41 protein regions either amino to or carboxy to the actual DP107 gp41 amino acid sequence, respectively. Thus, a preferred amino terminal or carboxy terminal amino acid insertion would contain gp41 amino acid sequences found immediately amino to or carboxy to the DP107 region of the gp41 protein.

Deletions of DP107 or DP178 truncations are also within the scope of the invention. Such deletions consist of the removal of one or more amino acids from the DP107 or DP107-like peptide sequence, with the lower limit length of the resulting peptide sequence being 4 to 6 amino acids. Such deletions may involve a single contiguous or greater than one discrete portion of the peptide sequences. One or more such deletions may be introduced into DP107 or DP107 truncations, as long as such deletions result in peptides which may still be recognized by the 107x178x4, ALLMOTI5 or PLZIP search motifs described herein, or may, alternatively, exhibit antifusogenic or antiviral activity, or exhibit the ability to modulate intracellular processes involving coiled-coil peptide structures.

DP107 and DP107 truncations are more fully described in Applicants' co-pending U.S. patent application Ser. No. 08/374,666, filed Jan. 27, 1995, and which is incorporated herein by reference in its entirety. DP107 analogs are further described, below, in Section 5.3.

Peptides corresponding to analogs of the DP178, DP178 truncations, DP107 and DP107 truncation sequences of the invention, described, above, in Sections 5.1 and 5.2 may be found in other viruses, including, for example, non-HIV-1.sub.LAI enveloped viruses, non-enveloped viruses and other non-viral organisms.

The term "analog", as used herein, refers to a peptide which is recognized or identified via the 107x178x4, ALLMOTI5 and/or PLZIP search strategies discussed below. Further, such peptides may exhibit antifusogenic capability, antiviral activity, or the ability to modulate intracellular processes involving coiled-coil structures.

Such DP178 and DP107 analogs may, for example, correspond to peptide sequences present in TM proteins of enveloped viruses and may, additionally correspond to peptide sequences present in non enveloped and non-viral organisms. Such peptides may exhibit antifusogenic activity, antiviral activity, most particularly antiviral activity which is specific to the virus in which their native sequences are found, or may exhibit an ability to modulate intracellular processes involving coiled-coil peptide structures.

DP178 analogs are peptides whose amino acid sequences are comprised of the amino acid sequences of peptide regions of, for example, other (i.e., other than HIV-1.sub.LAI) viruses that correspond to the gp41 peptide region from which DP178 (SEQ ID:1) was derived. Such viruses may include, but are not limited to, other HIV-1 isolates and HIV-2 isolates. DP178 analogs derived from the corresponding gp41 peptide region of other (i.e., non HIV-1.sub.LAI) HIV-1 isolates may include, for example, peptide sequences as shown below.

NH.sub.2 -YTNTIYTLLEESQNQQEKNEQELLELDKWASLWNWF-COOH (DP-185; SEQ ID:3);

NH.sub.2 -YTGIIYNLLEESQNQQEKNEQELLELDKWANLWNWF-COOH (SEQ ID:4);

NH.sub.2 -YTSLIYSLLEKSQIQQEKNEQELLELDKWASLWNWF-COOH (SEQ ID:5).

SEQ ID:3 (DP-185), SEQ ID:4, and SEQ ID:5 are derived from HIV-1.sub.SF2, HIV-1.sub.RF, and HIV-1.sub.MN isolates, respectively. Underlined amino acid residues refer to those residues that differ from the corresponding position in the DP178 (SEQ ID:1) peptide. One such DP178 analog, DP-185 (SEQ ID:3), is described in the Example presented in Section 6, below, where it is demonstrated that DP-185 (SEQ ID:3) exhibits antiviral activity. The DP178 analogs of the invention may also include truncations, as described above. Further, the analogs of the invention modifications such those described for DP178 analogs in Section 5.1., above. It is preferred that the DP178 analogs of the invention represent peptides whose amino acid sequences correspond to the DP178 region of the gp41 protein, it is also contemplated that the peptides of the invention may, additionally, include amino sequences, ranging from about 2 to about 50 amino acid residues in length, corresponding to gp41 protein regions either amino to or carboxy to the actual DP178 amino acid sequence.

Striking similarities, as shown in FIG. 1, exist within the regions of HIV-1 and HIV-2 isolates which correspond to the DP178 sequence. A DP178 analog derived from the HIV-2.sub.NIHZ isolate has the 36 amino acid sequence (reading from amino to carboxy terminus):

NH.sub.2 -LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-COOH (SEQ ID:7)

Table III and Table IV show some possible truncations of the HIV-2.sub.NIHZ DP178 analog, which may comprise peptides of between 3 and 36 amino acid residues (i.e., peptides ranging in size from a tripeptide to a 36-mer polypeptide). Peptide sequences in these tables are listed from amino (left) to carboxy (right) terminus. "X" may represent an amino group (--NH.sub.2) and "Z" may represent a carboxyl (--COOH) group. Alternatively, "X" may represent a hydrophobic group, including but not limited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. Further, "Z" may represent an amido group; a T-butoxycarbonyl group; or a covalently attached macromolecular group, including but not limited to a lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptide group. A preferred "X" or "Z" macromolecular group is a peptide group.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

DP178 and DP107 analogs are recognized or identified, for example, by utilizing one or more of the 107x178x4, ALLMOTI5 or PLZIP computer-assisted search strategies described and demonstrated, below, in the Examples presented in Sections 9 through 16 and 19 through 25. The search strategy identifies additional peptide regions which are predicted to have structural and/or amino acid sequence features similar to those of DP107 and/or DP178.

The search strategies are described fully, below, in the Example presented in Section 9. While this search strategy is based, in part, on a primary amino acid motif deduced from DP107 and DP178, it is not based solely on searching for primary amino acid sequence homologies, as such protein sequence homologies exist within, but not between major groups of viruses. For example, primary amino acid sequence homology is high within the TM protein of different strains of HIV-1 or within the TM protein of different isolates of simian immunodeficiency virus (SIV). Primary amino acid sequence homology between HIV-1 and SIV, however, is low enough so as not to be useful. It is not possible, therefore, to find peptide regions similar to DP107 or DP178 within other viruses, or within non-viral organisms, whether structurally, or otherwise, based on primary sequence homology, alone.

Further, while it would be potentially useful to identify primary sequence arrangements of amino acids based on, for example, the physical chemical characteristics of different classes of amino acids rather than based on the specific amino acids themselves, such search strategies have, until now, proven inadequate. For example, a computer algorithm designed by Lupas et al. to identify coiled-coil propensities of regions within proteins (Lupas, A., et al., 1991 Science 252:1162-1164) is inadequate for identifying protein regions analogous to DP107 or DP178.

Specifically, analysis of HIV-1 gp160 (containing both gp120 and gp41) using the Lupas algorithm does not identify the coiled-coil region within DP107. It does, however, identify a region within DP178 beginning eight amino acids N-terminal to the start of DP178 and ending eight amino acids from the C-terminus. The DP107 peptide has been shown experimentally to form a stable coiled coil. A search based on the Lupas search algorithm, therefore, would not have identified the DP107 coiled-coil region. Conversely, the Lupas algorithm identified the DP178 region as a potential coiled-coil motif. However, the peptide derived from the DP178 region failed to form a coiled coil in solution.

A possible explanation for the inability of the Lupas search algorithm to accurately identify coiled-coil sequences within the HIV-1 TM, is that the Lupas algorithm is based on the structure of coiled coils from proteins that are not structurally or functionally similar to the TM proteins of viruses, antiviral peptides (e.g. DP107 and DP178) of which are an object of this invention.

The computer search strategy of the invention, as demonstrated in the Examples presented below, in Sections 9 through 16 and 19 through 25, successfully identifies regions of proteins similar to DP107 or DP178. This search strategy was designed to be used with a commercially-available sequence database package, preferably PC/Gene.

A series of search motifs, the 107x178x4, ALLMOTI5 and PLZIP motifs, were designed and engineered to range in stringency from strict to broad, as discussed in this Section and in Section 9, with 107x178x4 being preferred. The sequences identified via such search motifs, such as those listed in Tables V-XIV, below, potentially exhibit antifusogenic, such as antiviral, activity, may additionally be useful in the identification of antifusogenic, such as antiviral, compounds, and are intended to be within the scope of the invention.

Coiled-coiled sequences are thought to consist of heptad amino acid repeats. For ease of description, the amino acid positions within the heptad repeats are sometimes referred to as A through G, with the first position being A, the second B, etc. The motifs used to identify DP107-like and DP178-like sequences herein are designed to specifically search for and identify such heptad repeats. In the descriptions of each of the motifs described, below, amino acids enclosed by brackets, i.e., [ ], designate the only amino acid residues that are acceptable at the given position, while amino acids enclosed by braces, i.e., { }, designate the only amino acids which are unacceptable at the given heptad position. When a set of bracketed or braced amino acids is followed by a number in parentheses i.e., (), it refers to the number of subsequent amino acid positions for which the designated set of amino acids hold, e.g, a (2) means "for the next two heptad amino acid positions".

The ALLMOTI5 is written as follows:

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

{CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

Translating this motif, it would read: "at the first (A) position of the heptad, any amino acid residue except C, D, G, H, or P is acceptable, at the next two (B,C) amino acid positions, any amino acid residue except C, F, or P is acceptable, at the fourth heptad position (D), any amino acid residue except C, D, G, H, or P is acceptable, at the next three (E, F, G) amino acid positions, any amino acid residue except C, F, or P is acceptable. This motif is designed to search for five consecutive heptad repeats (thus the repeat of the first line five times), meaning that it searches for 35-mer sized peptides. It may also be designed to search for 28-mers, by only repeating the initial motif four times. With respect to the ALLMOTI5 motif, a 35-mer search is preferred. Those viral (non-bacteriophage) sequences identified via such an ALLMOTI5 motif are listed in Table V, below, at the end of this Section. The viral sequences listed in Table V potentially exhibit antiviral activity, may be useful in the identification of antiviral compounds, and are intended to be within the scope of the invention. In those instances wherein a single gene exhibits greater than one sequence recognized by the ALLMOTI5 search motif, the amino a cid residue numbers of these sequences are listed under "Area 2", Area 3", etc. This convention is used for each of the Tables listed, below, at the end of this Section.

The 107x178x4 motif is written as follows:

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

[EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

Translating this motif, it would read: "at the first (A) position of the heptad, only amino acid residue E, F, I, K, L, N, Q, S, T, V, W, or Y is acceptable, at the next two (B,C) amino acid positions, any amino acid residue except C, F, M or P is acceptable, at the fourth position (D), only amino acid residue E, F, I, K, L, N, Q, S, T, V, W, or Y is acceptable, at the next three (E, F, G) amino acid positions, any amino acid residue except C, F, M or P is acceptable. This motif is designed to search for four consecutive heptad repeats (thus the repeat of the first line four times), meaning that it searches for 28-mer sized peptides. It may also be designed to search for 35-mers, by repeating the initial motif five times. With respect to the 107x178x4 motif, a 28-mer search is preferred.

Those viral (non-bacteriophage) sequences identified via such a 107x178x4 motif are listed in Table VI, below, at the end of this Section, with those viral (non-bacteriophage) sequences listed in Table VII, below at the end of this Section, being preferred.

The 107x178x4 search motif was also utilized to identify non-viral procaryotic protein sequences, as listed in Table VIII, below, at the end of this Section. Further, this search motif was used to reveal a number of human proteins. The results of this human protein 107x178x4 search is listed in Table IX, below, at the end of this Section. The sequences listed in Tables VIII and IX, therefore, reveal peptides which may be useful as antifusogenic compounds or in the identification of antifusogenic compounds, and are intended to be within the scope of the invention.

The PLZIP series of motifs are as listed in FIG. 19. These motifs are designed to identify leucine zipper coiled-coil like heptads wherein at least one proline residue is present at some predefined distance N-terminal to the repeat. These PLZIP motifs find regions of proteins with similarities to HIV-1 DP178 generally located just N-terminal to the transmembrane anchor. These motifs may be translated according to the same convention described above. Each line depicted in FIG. 19 represents a single, complete search motif. "X" in these motifs refers to any amino acid residue. In instances wherein a motif contains two numbers within parentheses, this refers to a variable number of amino acid residues. For example, X (1,12) is translated to "the next one to twelve amino acid residues, inclusive, may be any amino acid".

Tables X through XIV, below, at the end of this Section, list sequences identified via searches conducted with such PLZIP motifs. Specifically, Table X lists viral sequences identified via PCTLZIP, P1CTLZIP and P2CTLZIP search motifs, Table XI lists viral sequences identified via P3CTLZIP, P4CTLZIP, P5CTLZIP and P6CTLZIP search motifs, Table XII lists viral sequences identified via P7CTLZIP, P8CTLZIP and P9CTLZIP search motifs, Table XIII lists viral sequences identified via P12LZIPC searches and Table XIV lists viral sequences identified via P23TLZIPC search motifs The viral sequences listed in these tables represent peptides which potentially exhibit antiviral activity, may be useful in the identification of antiviral compounds, and are intended to be within the scope of the invention.

The Examples presented in Sections 17, 18, 26 and 27 below, demonstrate that viral sequences identified via the motif searches described herein identify substantial antiviral characteristics. Specifically, the Example presented in Section 17 describes peptides with anti-respiratory syncytial virus activity, the Example presented in Section 18 describes peptides with anti-parainfluenza virus activity, the Example presented in Section 26 describes peptides with anti-measles virus activity and the Example presented in Section 27 describes peptides with anti-simian immunodeficiency virus activity.

The DP107 and DP178 analogs may, further, contain ny of the additional groups described for DP178, bove, in Section 5.1. For example, these peptides may include any of the additional amino-terminal groups as described above for "X" groups, and may also include any of the carboxy-terminal groups as described, above, for "Z" groups.

Additionally, truncations of the identified DP107 and DP178 peptides are among the peptides of the invention. Further, such DP107 and DP178 analogs and DP107/DP178 analog truncations may exhibit one or more amino acid substitutions, insertion, and/or deletions. The DP178 analog amino acid substitutions, insertions and deletions, are as described, above, for DP178-like peptides in Section 5.1. The DP-107 analog amino acid substitutions, insertions and deletions are also as described, above, for DP107-like peptides in Section 5.2.

Tables XV through XXII, below, present representative examples of such DP107/DP178 truncations. Specifically, Table XV presents Respiratory Syncytial Virus F1 region DP107 analog carboxy truncations, Table XVI presents Respiratory Syncytial Virus F1 region DP107 analog amino truncations, Table XVII presents Respiratory Syncytial Virus F1 region DP178 analog carboxy truncations, Table XVIII presents Respiratory Syncytial Virus F1 region DP178 analog amino truncations, Table XIX presents Human Parainfluenza Virus 3 F1 region DP178 analog carboxy truncations, Table XX presents Human Parainfluenza Virus 3 F1 region DP178 analog amino truncations, Table XXI presents Human Parainfluenza Virus 3 F1 region DP107 analog carboxy truncations and Table XXII presents Human Parainfluenza Virus 3 F1 region DP107 analog amino truncations. Further, Table XXIII, below, presents DP107/DP178 analogs and analog truncations which exhibit substantial antiviral activity. These antiviral peptides are grouped according to the specific virus which they inhibit, including respiratory syncytial virus, human parainfluenza virus 3, simian immunodeficiency virus and measles virus. - ALLMOTI5 SEARCH RESULTS SUMMARY FOR ALL VIRAL (NON-BACTERIOPHAGE) PROTEINS PCGENE ALLMOTI5 All Viruses (no bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 P170K.sub.-- TRVPS POTENTIAL 170 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PSG) 113-153 P194K.sub.-- TRVSY POTENTIAL 194 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN SYM 144-178 214-248 391-446 644-678 1045- 1135- 1335- 1618- 1079 1176 1376 1656 P55KD.sub.-- HSV6U 55 8 KD PROTEIN HERPES SIMPLEX VIRUS 228-262 (TYPE 6/STRAIN UGANDA-1102) PAANT.sub.-- HDVAM DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 3-48 100-144 PAANT.sub .-- HDVD3 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE D380) 7-48 100-144 PAANT.sub.-- HDVTT DELTA ANTIGEN (ALPHA ANTIGEN) HEPATITIS DELTA VIRUS (ISOLATE ITALIAN) 3-48 100-144 PAANT.sub.-- HDVL1 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE LEBANON-1) 3-48 PAANT.sub.-- HDVM1 DELTA ANTIGEN HEPATITIS DELTA VIRUS 3-48 100-144 (ISOLATE JAPANESE M-1) PAANT.sub.-- HDVM2 DELTA ANTIGEN HEPATITIS DELTA VIRUS 3-48 100-144 (ISOLATE JAPANESE M-2) PAANT.sub.-- HDVNA DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE NAURU) 3-48 100-144 PAANT.sub.-- HDVS1 DELTA ANTIGEN HEPATITIS DELTA VIRUS 1-49 100-144 (ISOLATE JAPANESE S-1) PAANT.sub.-- HDVS2 DELTA ANTIGEN HEPATITIS DELTA VIRUS 1-49 100-144 (ISOLATE JAPANESE S-2) PAANT.sub.-- HDVWO DELTA ANTIGEN HEPATITIS DELTA VIRUS 3-48 100-144 (ISOLATE WOODCHUCK) PAT3H.sub.-- FOWPM ANTITHROMBIN-III HOMOLOG FOWLPOX VIRUS (ISOLATE HP-438) 71-110 PAT11.sub.-- VACCV 94 KD A-TYPE INCLUSION PROTEIN VACCINIA VIRUS (STRAIN WR) 14-57 420-564 570-625 PAT11.sub.-- VARV 81 KD A-TYPE INCLUSION PROTEIN VARIOLA VIRUS 425-525 531-565 571-628 PAT12.sub.-- HSV11 ALPHA TRANS-INDUCING FACTOR HERPES SIMPLEX VIRUS (TYPE 1) 304-345 PAT12.sub.-- HSV1F ALPHA TRANS-INDUCING FACTOR HERPES SIMPLEX VIRUS (TYPE 1) 102-139 304-345 PAT12.sub.-- HSVEB ALPHA TRANS-INDUCING FACTOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 101-147 268-331 PAT12.sub.-- VACCC PUTATIVE A-TYPE INCLUSION PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 79-124 219-263 PAT12.sub.-- VACCV PUTATIVE A-TYPE INCLUSION PROTEIN VACCINIA VIRUS 79-124 PAT12.sub.-- VZVD ALPHA TRANS-INDUCING FACTOR VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 298-361 395-429 PAT13.sub.-- VACCV PUTATIVE A-TYPE INCLUSION PROTEIN VACCINIA VIRUS 51-95 PATIN.sub.-- HSV23 ALPHA TRANS-INDUCING PROTEIN (VMW65) HERPES SIMPLEX VIRUS (TYPE 2) 178-219 324-381 PATIN.sub.-- HSV2H ALPHA TRANS-INDUCING PROTEIN (VMW65) HERPES SIMPLEX VIRUS (TYPE 2) 177-222 324-381 PATIN.sub.-- HSVBP ALPHA TRANS-INDUCING PROTEIN BOVINE HERPESVIRUS TYPE 1 195-256 PATIN.sub.-- HSVEB ALPHA TRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 1 241-289 PATIN.sub.-- VZVD ALPHA TRANS-INDUCING PROTEIN ( VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 206-252 PATI.sub.-- COWPX A-TYPE INCLUSION PROTEIN COWPOX VIRUS 14-57 426-526 532-566 572-629 803-989 1106- 1150 PBDL2.sub.-- EBV PROTEIN BDLF2 EPSTEIN-BARR VIRUS (STRAIN B95-8) 90-131 PBRL1.sub.-- EBV TRANSCRIPTION ACTIVATOR BRLF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 150-187 PCOA1.sub.-- POVBA COAT PROTEIN VP1 POLYOMAVIRUS BK 107-141 PCOA1.sub.-- POVBK COAT PROTEIN VP1 POLYOMAVIRUS BK 107-141 PCOA1.sub.-- POVHA COAT PROTEIN VP1 HAMSTER POLYOMAVIRUS 159-195 PCOA1.sub.-- SV40 COAT PROTEIN VP1 SIMIAN VIRUS 40 109-143 PCOA2.sub.-- BFDV COAT PROTEIN VP2 BUDGERIGAR FLEDGLING DISEASE VIRUS 141-213 PCOA2.sub.-- POVBA COAT PROTEIN VP2 POLYOMAVIRUS BK (STRAIN AS) 14-64 317-351 PCOA2.sub.-- POVBK COAT PROTEIN VP2 POLYOMAVIRUS BK 14-64 317-351 PCOA2.sub.-- POVBO COAT PROTEIN VP2 BOVINE POLYOMAVIRUS 35-76 153-216 PCOA2.sub.-- POVHA COAT PROTEIN VP2 HAMSTER POLYOMAVIRUS 7-48 174-208 PCOA2.sub.-- POVIC COAT PROTEIN VP2 POLYOMAVIRUS JC 14-64 233-267 PCOA2.sub.-- POVLY COAT PROTEIN VP2 LYMPHOTROPIC POLYOMAVIRUS 14-78 156-206 PCOA2.sub.-- POVM3 COAT PROTEIN VP2 MOUSE POLYOMAVIRUS (STRAIN 3) 5-72 137-185 PCOA2.sub.-- POVMA COAT PROTEIN VP2 MOUSE POLYOMAVIRUS 5-72 137-185 PCOA2.sub.-- POVMC COAT PROTEIN VP2 MOUSE POLYOMAVIRUS 5-72 137-185 PCOA2.sub.-- POVMK COAT PROTEIN VP2 MOUSE POLYOMAVIRUS 15-56 177-211 PCOA2.sub.-- SV40 COAT PROTEIN VP2 SIMIAN VIRUS 40 14-62 228-262 318-352 PCOAT.sub.-- ABMVW COAT PROTEIN ABUTILON MOSAIC VIRUS 180-214 (ISOLATE WEST INDIA PCOAT.sub.-- ACLSV COAT PROTEIN APPLE CHLOROTIC LEAF SPOT VIRUS 154-188 PCOAT.sub.-- AEDEV COAT PROTEIN VP1 AEDES DENSONUCLEOSIS VIRUS 243-284 PCOAT.sub.-- AMCV COAT PROTEIN ARTICHOKE MOTTLED CRINKLE VIRUS 36-70 100-134 PCOAT.sub.-- BLRV COAT PROTEIN BEAN LEAFROLL VIRUS 89-123 PCOAT.sub.-- BMV COAT PROTEIN BROME MOSAIC VIRUS 36-73 PCOAT.sub.-- BYDV1 COAT PROTEIN BARLEY YELLOW DWARF VIRUS 163-197 PCOAT.sub.-- BYDVM COAT PROTEIN BARLEY YELLOW DWARF VIRUS 163-197 PCOAT.sub.-- BYDVP COAT PROTEIN BARLEY YELLOW DWARF VIRUS 164-198 PCOAT.sub.-- BYDVR COAT PROTEIN BARLEY YELLOW DWARF VIRUS 164-198 PCOAT.sub.-- CAMVC COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN 56-90 186-223 PCOAT.sub.-- CAMVD COAT PROTEIN CAULIFLOWER MOSAIC VIRUS 53-91 187-224 PCOAT.sub.-- CAMVE COAT PROTEIN CAULIFLOWER MOSAIC VIRUS 56-90 186-223 PCOAT.sub.-- CAMVN COAT PROTEIN CAULIFLOWER MOSAIC VIRUS 56-90 185-222 PCOAT.sub.-- CAMVS COAT PROTEIN CAULIFLOWER MOSAIC VIRUS 53-91 187-224 PCOAT.sub.-- CARMV COAT PROTEIN CARNATION MOTTLE VIRUS 13-51 PCOAT.sub.-- CCMV COAT PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 141-178 PCOAT.sub.-- CERV PROBABLE COAT PROTEIN CARNATION ETCHED RING VIRUS 192-226 PCOAT.sub.-- CHVP1 MAJOR CAPSID PROTEIN PARAMECIUM BURSARIA CHLORELLA VIRUS 1 393-435 PCOAT.sub.-- CLVK COAT PROTEIN CASSAVA LATENT VIRUS 197-231 PCOAT.sub.-- CLVN COAT PROTEIN CASSAVA LATENT VIRUS 197-231 PCOAT.sub.-- CMVFC COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT.sub.-- CMVI COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT.sub.-- CMVP6 COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT.sub.-- CMVQ COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT.sub.-- CMVWL COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT.sub.-- CMVY COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT.sub.-- CNV COAT PROTEIN CUCUMBER NECROSIS VIRUS 328-365 PCOAT.sub.-- CSMV COAT PROTEIN CHLORIS STRIATE MOSAIC VIRUS 184-218 PCOAT.sub.-- CTV36 COAT PROTEIN CITRUS TRISTEZA VIRUS 79-120 PCOAT.sub.-- CYMV COAT PROTEIN CLOVER YELLOW MOSAIC VIRUS 162-204 PCOAT.sub.-- EPMV COAT PROTEIN EGGPLANT MOSAIC VIRUS 40-74 PCOAT.sub.-- FCVC6 COAT PROTEIN FELINE CALICIVIRUS 432-466 566-600 PCOAT.sub.-- FCVF4 COAT PROTEIN FELINE CALICIVIRUS 502-550 566-600 PCOAT.sub.-- FCVF9 COAT PROTEIN FELINE CALICIVIRUS 519-553 569-603 PCOAT.sub.-- FMVD PROBABLE COAT PROTEIN FIGWORT MOSAIC VIRUS 144-199 206-247 449-483 PCOAT.sub.-- FXMV COAT PROTEIN FOXTAIL MOSAIC VIRUS 168-220 PCOAT.sub.-- IRV1 CAPSID PROTEIN TIPULA IRIDESCENT VIRUS 90-124 PCOAT.sub.-- IRV22 CAPSID PROTEIN SIMULIUM IRIDESCENT VIRUS 90-124 PCOAT.sub.-- IRV6 CAPSID PROTEIN CHILO IRIDESCENT VIRUS 51-85 PCOAT.sub.-- LSV COAT PROTEIN LILY SYMPTOMLESS VIRUS 32-70 255-289 PCOAT.sub.-- MSTV COAT PROTEIN MAIZE STRIPE VIRUS 7-76 84-121 PCOAT.sub.-- MSVK COAT PROTEIN MAIZE STREAK VIRUS 187-221 PCOAT.sub.-- MSVN COAT PROTEIN MAIZE STREAK VIRUS 187-221 PCOAT.sub.-- MSVS COAT PROTEIN MAIZE STREAK VIRUS 187-221 PCOAT.sub.-- ORSV COAT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 105-139 PCOAT.sub.-- PAVBO COAT PROTEIN VP2 BOVINE PARVOVIRUS 380-414 444-480 PCOAT.sub.-- PAVC7 COAT PROTEIN VP1 CANINE PARVOVIRUS 497-531 PCOAT.sub.-- PEBV COAT PROTEIN PEA EARLY BROWNING VIRUS 73-114 PCOAT.sub.-- POPMV COAT PROTEIN POPLAR MOSAIC VIRUS 36-81 PCOAT.sub.-- PPMVS COAT PROTEIN PEPPER MILD MOTTLE VIRUS 104-138 PCOAT.sub.-- PVSP COAT PROTEIN POTATO VIRUS 38-72 251-292 PCOAT.sub.-- PYMVV COAT PROTEIN POTATO YELLOW MOSAIC VIRUS 190-224 PCOAT.sub.-- RBDV COAT PROTEIN RASPBERRY BUSHY DWARF VIRUS 10-44 140-199 PCOAT.sub.-- RCNMV COAT PROTEIN RED CLOVER NECROTIC MOSAIC VIRUS 272-306 PCOAT.sub.-- RSV COAT PROTEIN RICE STRIPE VIRUS 34-68 83-120 259-309 PCOAT.sub.-- SLCV COAT PROTEIN SQUASH LEAF CURL VIRUS 190-224 PCOAT.sub.-- SMWLM COAT PROTEIN SATELLITE MAIZE WHITE LINE MOSAIC VIRUS 66-100 PCOAT.sub.-- SOCMV COAT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 128-166 PCOAT.sub.-- STNV1 COAT PROTEIN SATELLITE TOBACCO NECROSIS VIRUS 1 2-50 PCOAT.sub.-- STNV2 COAT PROTEIN SATELLITE TOBACCO NECROSIS VIRUS 2 38-72 PCOAT.sub.-- TAMV GENOME POLYPROTEIN TAMARILLO MOSAIC VIRUS 7-55 PCOAT.sub.-- TAV COAT PROTEIN TOMATO ASPERMY VIRUS 14-48 PCOAT.sub.-- TBSVB COAT PROTEIN TOMATO BUSHY STUNT VIRUS 1-37 43-77 PCOAT.sub.-- TBSVC COAT PROTEIN TOMATO BUSHY STUNT VIRUS 44-78 100-134 PCOAT.sub.-- TCV COAT PROTEIN TURNIP CRINKLE VIRUS 12-46 PCOAT.sub.-- TGMV COAT PROTEIN TOMATO GOLDEN MOSAIC VIRUS 186-220 PCOAT.sub.-- TMGMV COAT PROTEIN TOBACCO MILD GREEN MOSAIC VIRUS 103-137 PCOAT.sub.-- TMV COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT.sub.-- TMV06 COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT.sub.-- TMVCO COAT PROTEIN TOBACCO MOSAIC VIRUS 76-138 PCOAT.sub.-- TMVDA COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT.sub.-- TMVER COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT.sub.-- TMVHR COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT.sub.-- TMVO COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT.sub.-- TMVOM COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT.sub.-- TMVTO COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT.sub.-- TRVCA COAT PROTEIN TOBACCO RATTLE VIRUS 71-109 PCOAT.sub.-- TRVTC COAT PROTEIN TOBACCO RATTLE VIRUS 69-103 PCOAT.sub.-- TYDVA COAT PROTEIN TOBACCO YELLOW DWARF VIRUS 2-36 PCOAT.sub.-- TYMV COAT PROTEIN TURNIP YELLOW MOSAIC VIRUS 41-75 PCOAT.sub.-- TYMVA COAT PROTEIN TURNIP YELLOW MOSAIC VIRUS 41-75 PCOAT.sub.-- WCMVO COAT PROTEIN WHITE CLOVER MOSAIC VIRUS 163-197 PCORA.sub.-- HPBGS CORE ANTIGEN GROUND SQUIRREL HEPATITIS VIRUS 94-135 PCORA.sub.-- HPBV9 CORE ANTIGEN HEPATITIS B VIRUS 111-149 PCORA.sub.-- WHV1 CORE ANTIGEN WOODCHUCK HEPATITIS VIRUS 1 62-106 PCORA.sub.-- WHV8 CORE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8 62-106 PD250.sub.-- ASFB7 PROTEIN D250R AFRICAN SWINE FEVER VIRUS 198-232 PDNB2.sub.-- ADE02 EARLY E2A DNA-BINDING PROTEIN HUMAN ADENOVIRUS TYPE 2 291-336 PDNB2.sub.-- ADE05 EARLY E2A DNA-BINDING PROTEIN HUMAN ADENOVIRUS TYPE 5 291-336 PDNB1.sub.-- EBV MAJOR DNA-BINDING PROTEIN EPSTEIN-BARR VIRUS 25-252 718-752 974- 1027- 1009 1068 PDNB1.sub.-- HCMVA MAJOR DNA-BINDING PROTEIN HUMAN CYTOMEGALOVIRUS 338-372 1013- 1070 PDNB1.sub.-- HSV11 MAJOR DNA-BINDING PROTEIN HERPES SIMPLEX VIRUS 557-595 599-640 769-803 1079- 1140 PDNB1.sub.-- HSV1F MAJOR DNA-BINDING PROTEIN HERPES SIMPLEX VIRUS 557-595 599-640 769-803 1079- 1140 PDNB1.sub.-- HSV1K MAJOR DNA-BINDING PROTEIN HERPES SIMPLEX VIRUS 557-595 599-640 769-803 1079- 1140 PDNB1.sub.-- HSVB2 MAJOR DNA-BINDING PROTEIN BOVINE HERPESVIRUS TYPE 2 552-591 599-633 1048- 1131 PDNB1.sub.-- HSVE1 MAJOR DNA-BINDING PROTEIN EQUINE HERPESVIRUS TYPE 1 273-314 PDNB1.sub.-- HSVEB MAJOR DNA-BINDING PROTEIN EQUINE HERPESVIRUS TYPE 1 617-658 1107- 1148 PDNB1.sub.-- HSVSA MAJOR DNA-BINDING PROTEIN HERPESVIRUS SAIMIRI 222-259 330-367 506-557 873-907 PDNB1.sub.-- MCMVS MAJOR DNA-BINDING PROTEIN MURINE CYTOMEGALOVIRUS 584-618 987- 1125 PDNB1.sub.-- SCMVC MAJOR DNA-BINDING PROTEIN SIMIAN CYTOMEGALOVIRUS 525-562 PDNB1.sub.-- VZVD MAJOR DNA-BINDING PROTEIN VARICELLA-ZOSTER VIRUS 613-650 1043- 1077 PDNL1.sub.-- ASFM2 DNA LIGASE AFRICAN SWINE FEVER VIRUS 72-106 PDNL1.sub.-- VACCC DNA LIGASE VACCINIA VIRUS 395-436 PDNL1.sub.-- VACCV DNA LIGASE VACCINIA VIRUS 395-436 PDNL1.sub.-- VARV DNA LIGASE VARIOLA VIRUS 395-436 PDPOL.sub.-- ADE02 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 2 667-743 PDPOL.sub.-- ADE05 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 5 667-743 PDPOL.sub.-- ADE07 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 7 733-809 PDPOL.sub.-- ADE12 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 12 665-741 PDPOL.sub.-- CBEPV DNA POLYMERASE CHORISTONEURA BIENNIS ENTOMOPOXVIRUS 23-64 202-204 PDPOL.sub.-- CHVN2 DNA POLYMERASE CHLORELLA VIRUS NY-2A 247-284 PDPOL.sub.-- CHVP1 DNA POLYMERASE PARAMECIUM BURSARIA CHLORELLA VIRUS 1 247-284 PDPOL.sub.-- FOWPV DNA POLYMERASE FOWLPOX VIRUS 17-51 80-114 371-412 PDPOL.sub.-- HCMVA DNA POLYMERASE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 753-787 1033- 1074 PDPOL.sub.-- HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS 5-39 PDPOL.sub.-- HPBDC DNA POLYMERASE DUCK HEPATITIS B VIRUS (STRAIN CHINA) 5-39 PDPOL.sub.-- HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS 5-39 297-338 (WHITE SHANGHAI DUCK ISOLATE S3 PDPOL.sub.-- HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS VIRUS 291-325 PDPOL.sub.-- HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS 5-39 224-265 557-595 PDPOL.sub.-- HPBVY DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE AYW) 201-235 PDPOL.sub.-- HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE ADYW) 201-235 PDPOL.sub.-- HSV11 DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 511-559 PDPOL.sub.-- HSV1A DNA POLYMERASE HERPES SIMPLEX VIRUS 511-559 (TYPE 1/STRAIN ANGELOTTI PDPOL.sub.-- HSV1K DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 511-559 PDPOL.sub.-- HSV1S DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN SC16) 511-559 PDPOL.sub.-- HSV21 DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 186) 512-560 PDPOL.sub.-- HSVEB DNA POLYMERASE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 494-528 PDPOL.sub.-- HSV11 DNA POLYMERASE ICTALURID HERPESVIRUS 1 33-67 328-366 401-435 706-749 808-858 (CHANNEL CATFISH VIRUS) PDPOL.sub.-- NPVAC DNA POLYMERASE AUTOGRAPHA CALIFORNICA NUCLEAR 595-646 POLYHEDROSIS VIRUS PDPOL.sub.-- VACCC DNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN) 627-683 770-818 828-862 PDPOL.sub.-- VACCV DNA POLYMERASE VACCINIA VIRUS (STRAIN WR) 627-683 770-818 828-862 PDPOL.sub.-- VARV DNA POLYMERASE VARIOLA VIRUS 626-682 769-817 827-861 PDPOL.sub.-- VZVD DNA POLYMERASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 473-533 PDPOL.sub.-- WHV1 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 1 285-326 PDPOL.sub.-- WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 59 290-331 PDPOL.sub.-- WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 7 290-331 PDPOL.sub.-- WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 289-330 PDPOL.sub.-- WHV81 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 290-331 (INFECTIOUS CLONE) PDPOM.sub.-- HPBVY DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE AYW) 201-235 PDUT.sub.-- HSVEB DEOXYURIDINE 5'-TRIPHOSPHATE EQUINE HERPES VIRUS TYPE 1 (STRAIN AB4P 135-169 NUCLEOTIDOHY PDUT.sub.-- HSVSA DEOXYURIDINE 5'-TRIPHOSPHATE HERPESVIRUS SAIMIRI (STRAIN 11) 179-223 NUCLEOTIDOHY PE1A.sub.-- ADE41 EARLY E1A 27 KD PROTEIN HUMAN ADENOVIRUS TYPE 41 107-141 PE1BL.sub.-- ADE40 E1B PROTEIN, LARGE T-ANTIGEN HUMAN ADENOVIRUS TYPE 40 102-166 PE1BS.sub.-- ADE02 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 2 103-137 PE1BS.sub.-- ADE05 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 5 103-137 PE1BS.sub.-- ADE12 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 12 96-131 PE1BS.sub.-- ADE40 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 40 100-134 PE1BS.sub.-- ADE41 E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 41 100-134 PE1BS.sub.-- ADEM1 E1B PROTEIN, SMALL T-ANTIGEN MOUSE ADENOVIRUS TYPE 1 199-173 PE314.sub.-- ADE02 EARLY E3B 14 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 2-39 PE314.sub.-- ADE03 EARLY E3 15.3 KD PROTEIN HUMAN ADENOVIRUS TYPE 3 8-49 PE314.sub.-- ADE05 EARLY E3 14.5 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 2-39 PE314.sub.-- ADE07 EARLY E3 15.3 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 7-48 PE320.sub.-- ADE35 EARLY E3 20.3 KD GLYCOPROTEIN HUMAN ADENOVIRUS TYPE 35 70-107 PE321.sub.-- ADE35 EARLY E3 20.6 KD GLYCOPROTEIN HUMAN ADENOVIRUS TYPE 35 125-169 PE411.sub.-- ADE02 PROBABLE EARLY E4 11 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 10-44 PE411.sub.-- ADE05 PROBABLE EARLY E4 11 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 10-44 PEAR.sub.-- EBV EARLY ANTIGEN PROTEIN R EPSTEIN-BARR VIRUS (STRAIN B95-8) 123-157 PEBN4.sub.-- EBV EBNA-4 NUCLEAR PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 487-521 PEFT1.sub.-- VARV EARLY TRANSCRIPTION FACTOR VARIOLA VIRUS 23-71 307-341 70 KD SUBUNIT PENV1.sub.-- FRSFV ENV POLYPROTEIN PRECURSOR FRIEND SPLEEN FOCUS-FORMING VIRUS 341-375 PENV2.sub.-- FRSFV ENV POLYPROTEIN PRECURSOR FRIEND SPLEEN FOCUS-FORMING VIRUS 341-378 PENV.sub.-- AVIRE ENV POLYPROTEIN AVIAN RETICULOENDOTHELIOSIS VIRUS 420-472 PENV.sub.-- AVISN ENV POLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 426-478 PENV.sub.-- BAEVM ENV POLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 390-456 PENV.sub.-- BIV06 ENV POLYPROTEIN PRECURSOR BOVINE IMMUNODEFICIENCY VIRUS 10-44 88-122 221-255 530-610 635-691 (ISOLATE 106) PENV.sub.-- BIV27 ENV POLYPROTEIN PRECURSOR BOVINE IMMUNODEFICIENCY VIRUS 10-44 88-122 159-193 250-284 559-639 664-724 (ISOLATE 127) PENV.sub.-- BLVAF ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (AMERICAN ISOLATE FLK) PENV.sub.-- BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (AUSTRALIAN ISOLATE) PENV.sub.-- BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (AMERICAN ISOLATE VDM) PENV.sub.-- BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (BELGIUM ISOLATE LB285) PENV.sub.-- BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 BELGIUM ISOLATE LB59) PENV.sub.-- BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (JAPANESE ISOLATE BLV-1) PENV.sub.-- CAEVC ENV POLYPROTEIN PRECURSOR CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 157-196 615-720 751-785 847-895 (STRAIN CORK) PENV.sub.-- CAEVG ENV POLYPROTEIN PRECURSOR CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 154-193 613-718 749-783 845-893 (STRAIN G63) PENV.sub.-- EIAV1 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 668-716 (CLONE P3.2-1) PENV.sub.-- EIAV2 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-692 (CLONE P3.2-2) PENV.sub.-- EIAV3 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (CLONE P3.2-3) PENV.sub.-- EIAV5 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 38-76 437-526 560-594 659-693 (CLONE P3.2-5) PENV.sub.-- EIAV9 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (CLONE 1369) PENV.sub.-- EIAVC ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (CLONE CL22) PENV.sub.-- EIAVW ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (STRAIN WSU5) PENV.sub.-- EIAVY ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (ISOLATE WYOMING) PENV.sub.-- FENV1 ENV POLYPROTEIN PRECURSOR FELINE ENDOGENOUS VIRUS ECE1 503-555 567-604 PENV.sub.-- FIVPE ENVELOPE POLYPROTEIN PRECURSOR FELINE IMMUNODEFICIENCY VIRUS 610-690 715-756 (ISOLATE PETALUMA) PENV.sub.-- FIVSD ENVELOPE POLYPROTEIN PRECURSOR FELINE IMMUNODEFICIENCY VIRUS 601-688 713-754 (ISOLATE SAN DIEGO) PENV.sub.-- FIVT2 ENVELOPE POLYPROTEIN PRECURSOR FELINE IMMUNODEFICIENCY VIRUS 60-122 609-689 714-755 (ISOLATE TM2) PENV.sub.-- FLVC6 ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA PROVIRUS (CLONE CFE-6) 497-549 561-595 PENV.sub.-- FLVGL ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA VIRUS 478-530 542-576 (STRAIN A/GLASGOW-1) PENV.sub.-- FLVLB ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA VIRUS 498-550 562-596 (STRAIN LAMBDA-B1) PENV.sub.-- FLVSA ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA VIRUS (STRAIN SARMA) 475-527 539-573 PENV.sub.-- FOAMV ENV POLYPROTEIN HUMAN SPUMARETROVIRUS 1-41 154-205 321-355 563-693 866-903 PENV.sub.-- FSVGA ENV POLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 498-550 562-596 (STRAIN GARDNER-ARNSTEIN) PENV.sub.-- FSVGB ENV POLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 478-530 542-576 (STRAIN GA) PENV.sub.-- FSVSM ENV POLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 481-524 545-579 (STRAIN SM) PENV.sub.-- FSVST ENV POLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 498-532 (STRAIN SNYDER-THEILEN) PENV.sub.-- GALV ENV POLYPROTEIN PRECURSOR GIBBON APE LEUKEMIA VIRUS 523-575 587-621 PENV.sub.-- HTL1A ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 321-383 (STRAIN ATK) PENV.sub.-- HTL1C ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 316-383 (CARIBBEAN ISOLATE) PENV.sub.-- HTL1M ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 321-383 (ISOLATE MT-2) PENV.sub.-- HTLV2 ENV POLYPROTEIN PRECURSOR HUMAN T-CELL LEUKEMIA VIRUS TYPE II 317-377 PENV.sub.-- HV1A2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 497-593 612-711 766-845 PRECURSOR (ARV2/SF2 ISOLATE PENV.sub.-- HV1B1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712 767-843 PRECURSOR (BH10 ISOLATE) PENV.sub.-- HV1B8 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-589 605-707 762-838 PRECURSOR (BH8 ISOLATE) PENV.sub.-- HV1BN ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-365 501-590 609-708 763-831 PRECURSOR (CONT (BRAIN ISOLATE) PENV.sub.-- HV1BR ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 510-599 615-717 772-841 PRECURSOR (BRU ISOLATE) PENV.sub.-- HV1C4 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 342-376 510-606 626-724 779-855 PRECURSOR (CDC-451 ISOLATE) PENV.sub.-- HV1EL ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 502-591 607-709 768-829 PRECURSOR (ELI ISOLATE) PENV.sub.-- HV1H2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712 767-836 PRECURSOR (HXB2 ISOLATE) PENV.sub.-- HV1H3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712 767-843 PRECURSOR (HXB3 ISOLATE) PENV.sub.-- HV1J3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-377 517-605 622-723 778-843 PRECURSOR (JH3 ISOLATE) PENV.sub.-- HV1JR ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 329-363 497-586 603-704 759-835 PRECURSOR (JRCSF ISOLATE) PENV.sub.-- HV1KB ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 88-122 338-372 511-545 555-599 618-677 681-718 772-848 PRECURSOR (STRAIN KB-1-GP32) PENV.sub.-- HV1MA ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 259-300 507-596 617-714 770-825 PRECURSOR (MAL ISOLATE) PENV.sub.-- HV1MF ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 503-592 622-710 765-841 PRECURSOR (MFA ISOLATE) PENV.sub.-- HV1MN ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 336-370 506-595 617-713 774-841 PRECURSOR (MN ISOLATE) PENV.sub.-- HV1N5 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 326-360 PRECURSOR (NEW YORK-5 ISOL PENV.sub.-- HV1ND ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 249-290 495-584 601-702 757-825 PRECURSOR (NDK ISOLATE) PENV.sub.-- HV1OY ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 336-370 497-593 610-711 766-842 PRECURSOR (OY1 ISOLATE) PENV.sub.-- HV1PV ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712 767-843 PRECURSOR (PV22 ISOLATE) PENV.sub.-- HV1RH ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 344-378 507-603 619-721 776-852 PRECURSOR (RF/HAT ISOLATE) PENV.sub.-- HV1S1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 496-585 602-703 758-830 PRECURSOR (SF162 ISOLATE) PENV.sub.-- HV1S3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 332-366 494-590 607-708 763-837 PRECURSOR (SF33 ISOLATE) PENV.sub.-- HV1SC ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-365 498-594 611-712 767-834 PRECURSOR (SC ISOLATE) PENV.sub.-- HV1W1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-365 498-594 611-712 767-836 PRECURSOR (WMJ1 ISOLATE) PENV.sub.-- HV1W2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 327-361 489-594 602-703 758-827 PRECURSOR (WMJ2 ISOLATE) PENV.sub.-- HV1Z2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 502-591 610-709 764-831 PRECURSOR (Z2/CDC-Z34 ISOLAT PENV.sub.-- HV1Z3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 251-292 PRECURSOR (ZAIRE 3 ISOLATE) PENV.sub.-- HV1Z6 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 256-297 504-593 609-711 766-840 PRECURSOR (ZAIRE 6 ISOLATE) PENV.sub.-- HV1Z8 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 266-307 512-601 617-675 682-719 774-831 PRECURSOR (Z-84 ISOLATE) PENV.sub.-- HV1ZH ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 522-594 612-671 675-712 777-839 PRECURSOR (ZAIRE HZ321 ISOLA PENV.sub.-- HV2BE ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 447-481 510-595 617-680 PRECURSOR (ISOLATE BEN) PENV.sub.-- HV2CA ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 512-597 619-709 PRECURSOR (ISOLATE CAM2) PENV.sub.-- HV2D1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 501-586 608-698 PRECURSOR (ISOLATE D194) PENV.sub.-- HV2G1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 439-473 502-587 609-699 PRECURSOR (ISOLATE GHANA-1) PENV.sub.-- HV2NZ ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 488-587 609-699 PRECURSOR (ISOLATE NIH-Z) PENV.sub.-- HV2RO ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 511-596 618-708 PRECURSOR (ISOLATE ROD) PENV.sub.-- HV2S2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 442-476 505-590 612-702 PRECURSOR (ISOLATE ST/24.1C# PENV.sub.-- HV2SB ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 526-588 614-700 PRECURSOR (ISOLATE SBLISY) PENV.sub.-- HV2ST ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 442-476 505-590 612-702 PRECURSOR (ISOLATE ST) PENV.sub.-- IPMAE ENV POLYPROTEIN PRECURSOR MOUSE INTRACISTERNAL A-PARTICLE 367-422 465-527 PENV.sub.-- JSRV ENV POLYPROTEIN PRECURSOR SHEEP PULMONARY ADENOMATOSIS VIRUS 403-455 571-605 PENV.sub.-- MCFF ENV POLYPROTEIN PRECURSOR MINK CELL FOCUS-FORMING MURINE 473-525 537-571 LEUKEMIA VIRUS PENV.sub.-- MCFF3 ENV POLYPROTEIN PRECURSOR MINK CELL FOCUS-FORMING MURINE 474-526 538-572 (COAT POLYPROTE LEUKEMIA VIRUS (ISOLA PENV.sub.-- MLVAV ENV POLYPROTEIN PRECURSOR AKV MURINE LEUKEMIA VIRUS 503-555 567-601 PENV.sub.-- MLVCB ENV POLYPROTEIN PRECURSOR CAS-BR-E MURINE LEUKEMIA VIRUS 498-550 562-596 PENV.sub.-- MLVF5 ENV POLYPROTEIN PRECURSOR FRIEND MURINE LEUKEMIA VIRUS (ISOLATE 57) 520-564 576-610 PENV.sub.-- MLVFF ENV POLYPROTEIN PRECURSOR FRIEND MURINE LEUKEMIA VIRUS 520-564 576-610 (ISOLATE FB29) PENV.sub.-- MLVFP ENV POLYPROTEIN PRECURSOR FRIEND MURINE LEUKEMIA VIRUS 520-564 576-610 (ISOLATE PVC-211) PENV.sub.-- MLVHO ENV POLYPROTEIN PRECURSOR HOMULV MURINE LEUKEMIA VIRUS 504-551 563-597 PENV.sub.-- MLVKI ENV POLYPROTEIN KIRSTEN MURINE LEUKEMIA VIRUS 40-92 104-138 PENV.sub.-- MLVMO ENV POLYPROTEIN PRECURSOR MOLONEY MURINE LEUKEMIA VIRUS 502-554 566-600 PENV.sub.-- MLVRD ENV POLYPROTEIN PRECURSOR RADIATION MURINE LEUKEMIA VIRUS 497-549 561-595 PENV.sub.-- MLVRK ENV POLYPROTEIN PRECURSOR RADIATION MURINE LEUKEMIA VIRUS 497-549 561-595 (STRAIN KAPLAN) PENV.sub.-- MMTVB ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 477-539 556-612 PENV.sub.-- MMTVG ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 477-539 556-612 PENV.sub.-- MPMV ENV POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 408-474 PENV.sub.-- MSVFB ENV POLYPROTEIN FBJ MURINE OSTEOSARCOMA VIRUS 43-95 107-141 PENV.sub.-- OMVVS ENV POLYPROTEIN PRECURSOR OVINE LENTIVIRUS (STRAIN SA-OMVV) 22-64 185-223 664-746 780-816 PENV.sub.-- RMCFV ENV POLYPROTEIN PRECURSOR RAUSCHER MINK CELL FOCUS-INDUCING VIRUS 484-528 540-574 PENV.sub.-- RSFFV ENV POLYPROTEIN PRECURSOR RAUSCHER SPLEEN FOCUS-FORMING VIRUS 342-376 PENV.sub.-- SFV1 ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 1-41 101-140 154-205 321-355 563-651 658-693 866-904 PENV.sub.-- SFV3L ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/ 5-46 158-209 319-357 560-706 863-901 STRAIN LK3) PENV.sub.-- SIVA1 ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 269-310 551-623 643-693 PRECURSOR (AGM155 ISOLATE) PENV.sub.-- SIVAG ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 556-628 651-699 808-852 PRECURSOR (AGM3 ISOLATE) PENV.sub.-- SIVAI ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 257-291 336-370 535-607 627-684 792-840 PRECURSOR (ISOLATE AGM/CLONE GR1 PENV.sub.-- SIVAT ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 264-298 549-621 644-692 796-833 PRECURSOR (TYO-1 ISOLATE) PENV.sub.-- SIVCZ ENVELOPE POLYPROTEIN GP160 CHIMPANZEE IMMUNODEFICIENCY VIRUS 253-291 330-365 512-584 669-703 803-837 PRECURSOR (SIV(CPZ)) PENV.sub.-- SIVGB ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 566-654 677-725 PRECURSOR (ISOLATE GB1) PENV.sub.-- SIVM1 ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 114-151 465-506 528-613 635-725 809-864 PRECURSOR (MM142-83 ISOLATE) PENV.sub.-- SIVM2 ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 71-109 161-219 245-286 PRECURSOR (MM251 ISOLATE) PENV.sub.-- SIVMK ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 464-505 540-612 638-724 PRECURSOR (K6W ISOLATE) PENV.sub.-- SIVML ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 464-505 540-612 638-724 PRECURSOR (K78 ISOLATE) PENV.sub.-- SIVS4 ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 466-509 517-616 638-728 812-853 PRECURSOR (F236/SMH4 ISOLATE) PENV.sub.-- SIVSP ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 470-513 521-620 642-732 811-848 PRECURSOR (PBJ/BC13 ISOLATE) PENV.sub.-- SMRVH ENV POLYPROTEIN PRECURSOR SQUIRREL MONKEY RETROVIRUS (SMRV-H) 400-466 PENV.sub.-- SRV1 ENV POLYPROTEIN SIMIAN RETROVIRUS SRV-1 409-475 PENV.sub.-- VILV ENV POLYPROTEIN PRECURSOR VISNA LENTIVIRUS (STRAIN 1514) 21-62 184-222 637-740 773-809 PENV.sub.-- VILV1 ENV POLYPROTEIN PRECURSOR VISNA LENTIVIRUS 21-62 184-222 643-746 780-816 (STRAIN 1514/CLONE LV1-1KS1) PENV.sub.-- VILV2 ENV POLYPROTEIN PRECURSOR VISNA LENTIVIRUS 21-62 184-222 645-748 782-818 (STRAIN 1514/CLONE LV1-1KS2) PERBA.sub.-- AVIER ERBA ONCOGENE PROTEIN AVIAN ERYTHROBLASTOSIS VIRUS 106-140 (STRAIN ES4) PETF1.sub.-- FOWP1 EARLY TRANSCRIPTION FACTOR FOWLPOX VIRUS (STRAIN FP-1) 190-224 553-587 70 KD SUBUNIT PETF1.sub.-- SFVKA EARLY TRANSCRIPTION FACTOR SHOPE FIBROMA VIRUS (STRAIN KASZA) 37-71 267-340 550-587 70 KD SUBUNIT PETF1.sub.-- VACCC EARLY TRANSCRIPTION FACTOR VACCINIA VIRUS (STRAIN COPENHAGEN) 23-71 307-341 70 KD SUBUNIT PETF1.sub.-- VACCV EARLY TRANSCRIPTION FACTOR VACCINIA VIRUS (STRAIN WR) 23-71 307-341 70 KD SUBUNIT PETF2.sub.-- VACCC EARLY TRANSCRIPTION FACTOR VACCINIA VIRUS (STRAIN COPENHAGEN) 52-97 174-208 82 KD SUBUNIT PETF2.sub.-- VARV EARLY TRANSCRIPTION FACTOR VARIOLA VIRUS 52-97 174-208 82 KD SUBUNIT PEXON.sub.-- HCMVA ALKALINE EXONUCLEASE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 80-114 PEXON.sub.-- HSVEB ALKALINE EXONUCLEASE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 89-141 PEXON.sub.-- PRVNJ ALKALINE EXONUCLEASE PSEUDORABIES VIRUS (STRAIN NIA-3) 82-120 PEXON.sub.-- VZVD ALKALINE EXONUCLEASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 109-157 342-383 PFIB2.sub.-- ADE40 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 182-237 PFIB2.sub.-- ADE41 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 182-223 PFIBP.sub.-- ADE03 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 3 156-194 PFIBP.sub.-- ADE07 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 7 176-210 PFIBP.sub.-- ADE40 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 303-352 PFIBP.sub.-- ADE41 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 320-366 PFIBP.sub.-- ADEB3 FIBER PROTEIN BOVINE ADENOVIRUS TYPE 3 181-215 585-626 PFOSX.sub.-- MSVFR V-FOS/FOX TRANSFORMING PROTEIN FBR MURINE OSTEOSARCOMA VIRUS 131-169 PFOS.sub.-- AVINK P55-V-FOS TRANSFORMING PROTEIN AVIAN RETROVIRUS NK24 109-152 PFOS.sub.-- MSVFB P55-V-FOS TRANSFORMING PROTEIN FBJ MURINE OSTEOSARCOMA VIRUS 155-193 PGAGC.sub.-- AVISC P47(GAG-CRK) PROTEIN AVIAN SARCOMA VIRUS (STRAIN CT10) 57-101 PGAG.sub.-- AVEV1 GAG POLYPROTEIN AVIAN ENDOGENOUS VIRUS EV-1 57-94 PGAG.sub.-- AVEV2 GAG POLYPROTEIN AVIAN ENDOGENOUS ROUS-ASSOCIATED 6-43 VIRUS-0 PGAG.sub.-- AVIMC GAG POLYPROTEIN AVIAN MYELOCYTOMATOSIS VIRUS MC29 57-94 PGAG.sub.-- AVIMD GAG POLYPROTEIN AVIAN MYELOCYTOMATOSIS VIRUS HBI 57-94 PGAG.sub.-- AVISU CORE PROTEIN P19 AVIAN SARCOMA VIRUS (STRAIN UR2) 57-94 PGAG.sub.-- AVISY GAG POLYPROTEIN AVIAN SARCOMA VIRUS (STRAIN Y73) 57-94 PGAG.sub.-- BIV06 GAG POLYPROTEIN (P53) BOVINE IMMUNODEFICIENCY VIRUS 1-41 (ISOLATE 106) PGAG.sub.-- EIAVY GAG POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 61-118 (CLONE CL22) PGAG.sub.-- FIVPE GAG POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 76-110 (ISOLATE PETALUMA) PGAG.sub.-- FIVSD GAG POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 76-110 (ISOLATE SAN DIEGO) PGAG.sub.-- FIVT2 GAG POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 76-110 (ISOLATE TM2) PGAG.sub.-- FLV GAG POLYPROTEIN FELINE LEUKEMIA VIRUS 496-537 PGAG.sub.-- FOAMV GAG POLYPROTEIN HUMAN SPUMARETROVIRUS 130-186 391-425 439-480 607-655 PGAG.sub.-- FSVMD GAG POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN MCDONOUGH) 499-534 PGAG.sub.-- FUJSV GAG POLYPROTEIN FUJINAMI SARCOMA VIRUS 57-94 PGAG.sub.-- GALV GAG POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 393-444 PGAG.sub.-- HV1A2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-133 294-328 (ARV2/SF2 ISOLATE PGAG.sub.-- HV1B1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-131 292-326 (BH10 ISOLATE) PGAG.sub.-- HV1B5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-131 292-326 (BH5 ISOLATE) PGAG.sub.-- HV1BR GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-131 292-326 (BRU ISOLATE) PGAG.sub.-- HV1C4 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-131 292-326 (CDC-451 ISOLATE) PGAG.sub.-- HV1EL GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 93-131 292-326 (ELI ISOLATE) PGAG.sub.-- HV1H2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-131 292-326 (HXB2 ISOLATE) PGAG.sub.-- HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-131 292-326 (JH3 ISOLATE) PGAG.sub.-- HV1JR GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-131 292-326 (JRCSF ISOLATE) PGAG.sub.-- HV1MA GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-137 (MAL ISOLATE) PGAG.sub.-- HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-134 295-329 (MN ISOLATE) PGAG.sub.-- HV1N5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-131 292-326 (NEW YORK-5 ISOL PGAG.sub.-- HVIND GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-128 289-323 (NDK ISOLATE) PGAG.sub.-- HV1OY GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-131 292-326 (OYI ISOLATE) PGAG.sub.-- HV1PV GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-131 292-326 (PV22 ISOLATE) PGAG.sub.-- HV1RH GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 90-131 292-326 (RF/HAT ISOLATE) PGAG.sub.-- HV1U4 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-127 (STRAIN UGANDAN PGAG.sub.-- HV1W2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 292-326 (WMJ2 ISOLATE) PGAG.sub.-- HV1Z2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-132 293-327 (Z2/CDC-Z34 ISOLAT PGAG.sub.-- HV2SB GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 292-326 293-327 (ISOLATE SBLISY) PGAG.sub.-- IPHA RETROVIRUS-RELATED GAG POLYPROTEIN HAMSTER INTRACISTERNAL A-PARTICL E 93-127 320-357 PGAG.sub.-- IPMA RETROVIRUS-RELATED GAG POLYPROTEIN MOUSE INTRACISTERNAL A-PARTICLE 67-103 PGAG.sub.-- IPMAE RETROVIRUS-RELATED GAG POLYPROTEIN MOUSE INTRACISTERNAL A-PARTICL E 89-133 138-172 PGAG.sub.-- JSRV GAG POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 470-504 PGAG.sub.-- MMTVB GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 83-151 156-190 PGAG.sub.-- MMTVG GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 83-151 156-190 PGAG.sub.-- MPMV GAG POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 222-260 PGAG.sub.-- RSVP GAG POLYPROTEIN ROUS SARCOMA VIRUS (STRAIN PRAGUE C) 57-94 PGAG.sub.-- SCVLA MAJOR COAT PROTEIN SACCHAROMYCES CEREVISIAE VIRUS L-A 102-139 490-531 (SCV-L-A) PGAG.sub.-- SFV1 GAG POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 128-177 378-416 583-634 PGAG.sub.-- SFV3L GAG POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/ 373-407 435-522 591-632 STRAIN LK3) PGAG.sub.-- SIVA1 GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 302-336 (AGM155 ISOLATE) PGAG.sub.-- SIVAG GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 306-340 (AGM3 ISOLATE) PGAG.sub.-- SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 183-217 473-507 (ISOLATE AGM/CLONE GR1 PGAG.sub.-- SIVAT GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 302-336 (TYO-1 ISOLATE) PGAG.sub.-- SIVCZ GAG POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 301-335 (SIV(CPZ)) PGAG.sub.-- SIVGB GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 163-204 223-267 283-317 (ISOLATE GB1) PGAG.sub.-- SMSAV GAG POLYPROTEIN SIMIAN SARCOMA VIRUS 394-431 PHELI.sub.-- HSV11 PROBABLE HELICASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 172-206 769-820 PHELI.sub.-- HSV2H PROBABLE HELICASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 468-502 670-721 PHELI.sub.-- HSVSA PROBABLE HELICASE HERPESVIRUS SAIMIRI (STRAIN 11) 158-203 413-449 599-633 PHELI.sub.-- VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 445-517 782-821 PHEMA.sub.-- CVBF HEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS (STRAIN F15) 208-242 PHEMA.sub.-- CVBLY HEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138) 208-242 PHEMA.sub.-- CVBM HEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS) 208-242 PHEMA.sub.-- CVBQ HEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS (STRAIN QUEBEC), 208-242 PHEMA.sub.-- CVHOC HEMAGGLUTININ-ESTERASE PRECURSOR HUMAN CORONAVIRUS (STRAIN OC43) 208-242 PHEMA.sub.-- IAAIC HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/AICHI/2/68) 380-456 PHEMA.sub.-- IABAN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/BANGKOK/1/79) 364-440 PHEMA.sub.-- IABUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PHEMA.sub.-- IACKA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/CHICKEN/ALABAMA/1/75) PHEMA.sub.-- IACKG HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 108-142 375-475 494-528 (STRAIN A/CHICKEN/GERMANY/N/49) PHEMA.sub.-- IACKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-452 487-532 (STRAIN A/CHICKEN/PENNSYLVANIA/1/83) PHEMA.sub.-- IACKQ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-452 487-532 (STRAIN A/CHICKEN/PENNSYLVANIA/1370/ PHEMA.sub.-- IACKS HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-469 504-549 (STRAIN A/CHICKEN/SCOTLAND/59) PHEMA.sub.-- IACKV HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 377-469 (STRAIN A/CHICKEN/VICTORIA/1/85) PHEMA.sub.-- IADA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/DUCK/ALBERTA/28/76) PHEMA.sub.-- IADA2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-476 495-547 (STRAIN A/DUCK/ALBERTA/60/76) PHEMA.sub.-- IADA3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-453 (STRAIN A/DUCK/ALBERTA/78/76) PHEMA.sub.-- IADA4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-478 506-548 (STRAIN A/DUCK/ALBERTA/35/76) PHEMA.sub.-- IADCZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/DUCK/CZECHOSLOVAKIA/56) PHEMA.sub.-- IADE1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 377-472 (STRAIN A/DUCK/ENGLAND/1/56) PHEMA.sub.-- IADH1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/5/77) PHEMA.sub.-- IADH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/8/80) PHEMA.sub.-- IADH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/33/80) PHEMA.sub.-- IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/7/82) PHEMA.sub.-- IADH5 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/21/82) PHEMA.sub.-- IADH6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/9/85) PHEMA.sub.-- IADH7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/10/85) PHEMA.sub.-- IADIR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-471 506-551 (STRAIN A/DUCK/IRELAND/113/83) PHEMA.sub.-- IADM1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAIN A/DUCK/MEMPHIS/546/76) PHEMA.sub.-- IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/DUCK/MEMPHIS/928/74) PHEMA.sub.-- IADNY HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAIN A/DUCK/NEW YORK/12/78) PHEMA.sub.-- IADNZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/DUCK/NEW ZEALAND/31/76) PHEMA.sub.-- IADU1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAIN A/DUCK/UKRAINE/1/60) PHEMA.sub.-- IADU3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/DUCK/UKRAINE/1/63) PHEMA.sub.-- IAEN7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/ENGLAND/321/77 PHEMA.sub.-- IAFPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-477 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PHEMA.sub.-- IAGRE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/GREY TEAL/AUSTRALIA/2/79) PHEMA.sub.-- IAGU2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-473 (STRAIN A/GULL/MARYLAND/704/77) PHEMA.sub.-- IAGUA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-476 (STRAIN A/GULL/ASTRAKHAN/227/84) PHEMA.sub.-- IAHAL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/ALGIERS/72) PHEMA.sub.-- IAHC6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/CAMBRIDGE/1/63) PHEMA.sub.-- IAHC7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/CAMBRIDGE/1/73) PHEMA.sub.-- IAHCD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-484 503-537 (STRAIN A/EQUINE/C.DETROIT/1/64) PHEMA.sub.-- IAHDE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-484 503-537 (STRAIN A/EQUINE/DETROIT/1/64) PHEMA.sub.-- IAHFO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/FONTAINEBLEAU/76) PHEMA.sub.-- IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/KENTUCKY/2/86) PHEMA.sub.-- IAHK7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/KENTUCKY/1/87) PHEMA.sub.-- IAHLE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/LEXINGTON/1/66) PHEMA.sub.-- IAHLO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/LONDON/1416/73) PHEMA.sub.-- IAHMI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/MIAMI/1/63 PHEMA.sub.-- IAHNM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/NEW MARKET/76) PHEMA.sub.-- IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/NEW MARKET/1/77) PHEMA.sub.-- IAHPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/PRAGUE/1/56) PHEMA.sub.-- IAHRO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/ROMANIA/80) PHEMA.sub.-- IAHSA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/SANTIAGO/1/85) PHEMA.sub.-- IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/SAO PAULO/1/76) PHEMA.sub.-- IAHSW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/SWITZERLAND/137/72) PHEMA.sub.-- IAHTE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/TENNESSEE/5/86) PHEMA.sub.-- IAHTO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/TOKYO/71) PHEMA.sub.-- IAHUR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/URUGUAY/1/63) PHEMA.sub.-- IAJAP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 375-467 502-547 (STRAIN A/STRAIN A/JAPAN/305/57 PHEMA.sub.-- IAKIE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 376-478 506-541 (STRAIN A/KIEV/59/79) PHEMA.sub.-- IALEN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 376-478 506-541 (STRAIN A/LENINGRAD/54/1) PHEMA.sub.-- IAMAA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-453 (STRAIN A/MALLARD/ASTRAKHAN/244/82) PHEMA.sub.-- IAMAB HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 382-458 (STRAIN A/MALLARD/ASTRAKHAN/263/82) PHEMA.sub.-- IAMAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/MALLARD/NEW YORK/6874/78) PHEMA.sub.-- IAME1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/MEMPHIS/1/71) PHEMA.sub.-- IAME2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/MEMPHIS/102/72) PHEMA.sub.-- IAME6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/MEMPHIS/6/86) PHEMA.sub.-- IAMIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 108-142 375-475 (STRAIN A/MINKS/SWEDEN/84) PHEMA.sub.-- IANT6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/NT/60/68) PHEMA.sub.-- IAPIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-477 496-534 (STRAIN A/PILOT WHALE/MAINE/328/84) PHEMA.sub.-- IAPUE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 376-478 506-548 (STRAIN A/PUERTO RICO/8/34) PHEMA.sub.-- IARUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/RUDDY TURNSTONE/NEW JERSE PHEMA.sub.-- IASE2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/SEAL/MASSACHUSETTS/133/82) PHEMA.sub.-- IASH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-474 506-552 (STRAIN A/SHEARWATER/AUSTRALIA/72) PHEMA.sub.-- IASTA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 377-469 (STRAIN A/STARLING/VICTORIA/5156/85) PHEMA.sub.-- IATKI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-471 506-551 (STRAIN A/TURKEY/IRELAND/1378/83) PHEMA.sub.-- IATKM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAIN A/TURKEY/MINNESOTA/833/80 PHEMA.sub.-- IATKO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 392-470 504-548 (STRAIN A/TURKEY/ONTARIO/7732/66) PHEMA.sub.-- IATKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 493-540 (STRAIN A/TURKEY/ONTARIO/6118/68) PHEMA.sub.-- IATKR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 30-64 374-474 (STRAIN A/TURKEY/OREGON/71) PHEMA.sub.-- IATKW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 373-472 487-539 (STRAIN A/TURKEY/WISCONSIN/1/66) PHEMA.sub.-- IATRA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAIN A/TERN/AUSTRALIA/G70C/75) PHEMA.sub.-- IAUDO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 387-456 (STRAIN A/UDORN/307/72) PHEMA.sub.-- IAUSS HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 376-478 506-548 (STRAIN A/USSR/90/77 PHEMA.sub.-- IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 381-457 (STRAIN A/VICTORIA/3/75) PHEMA.sub.-- IAWIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 375-477 505-547 (STRAIN A/WILSON-SMITH/33) PHEMA.sub.-- IAZCO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/SWINE/COLORADO/1/77) PHEMA.sub.-- IAZH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/SWINE/HONG KONG/81/78) PHEMA.sub.-- IAZH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/SWINE/HONG KONG/126/82) PHEMA.sub.-- IAZIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-478 506-548 (STRAIN A/SWINE/INDIANA/1726/88) PHEMA.sub.-- IAZNJ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-478 506-547 (STRAIN A/SWINE/NEW JERSEY/11/76) PHEMA.sub.-- IAZUK HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/SWINE/UKKEL/1/84 PHEMA.sub.-- INBBE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 388-473 (STRAIN B/BEIJING/1/87 PHEMA.sub.-- INBBO HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 378-463 (STRAIN B/BONN/43) PHEMA.sub.-- INBEN HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 386-471 (STRAIN B/ENGLAND/222/82) PHEMA.sub.-- INBHK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 381-463 (STRAIN B/HONG KONG/8/73) PHEMA.sub.-- INBLE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 387-472 (STRAIN B/LEE/40) PHEMA.sub.-- INBMD HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 377-462 (STRAIN B/MARYLAND/59) PHEMA.sub.-- INBME HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 381-468 (STRAIN B/MEMPHIS/6/86) PHEMA.sub.-- INBOR HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 386-471 (STRAIN B/OREGON/5/80) PHEMA.sub.-- INBSI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 386-471 (STRAIN B/SINGAPORE/222/79) PHEMA.sub.-- INBUS HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 379-464 (STRAIN B/USSR/100/83) PHEMA.sub.-- INBVI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 381-466 (STRAIN B/VICTORIA/3/85) PHEMA.sub.-- INBVK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 388-473 (STRAIN B/VICTORIA/2/87) PHEMA.sub.-- INCCA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-571 (STRAIN C/CALIFORNIA/78) PHEMA.sub.-- INCEN HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/ENGLAND/892/83) PHEMA.sub.-- INCGL HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/GREAT LAKES/1167/54) PHEMA.sub.-- INCHY HEMAGGLUTININ INFLUENZA C VIRUS 470-558 (STRAIN C/HYOGO/1/83) PHEMA.sub.-- INCJH HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 484-572 (STRAIN C/JOHANNESBURG/1/66) PHEMA.sub.-- INCKY HEMAGGLUTININ INFLUENZA C VIRUS 470-558 (STRAIN C/KYOTO/41/82) PHEMA.sub.-- INCMI HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 470-558 (STRAIN C/MISSISSIPPI/80) PHEMA.sub.-- INCNA HEMAGGLUTININ INFLUENZA C VIRUS 470-558 (STRAIN C/NARA/82) PHEMA.sub.-- INCP1 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/PIG/BEIJING/10/81) PHEMA.sub.-- INCP2 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/PIG/BEIJING/115/81) PHEMA.sub.-- INCP3 MEASLES VIRUS (STRAIN HALLE) INFLUENZA C VIRUS 471-559 (STRAIN C/PIG/BEIJING/439/82) PHEMA.sub.-- INCTA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/TAYLOR/1233/47 PHEMA.sub.-- INCYA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/YAMAGATA/10/81) PHEMA.sub.-- MEASE HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAIN EDMONSTON) 46-90 PHEMA.sub.-- MEASH HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAIN HALLE) 46-90 PHEMA.sub.-- MEASI HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAIN IP-3-CA) 46-87 PHEMA.sub.-- MEASY HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAIN YAMAGATA-1) 46-87 PHEMA.sub.-- MUMP1 HEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN SBL-1 34-99 PHEMA.sub.-- MUMPM HEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 34-99 PHEMA.sub.-- MUMPR HEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN RW) 34-99 PHEMA.sub.-- MUMPS HEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN SBL) 34-99 PHEMA.sub.-- NDVA HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS 8-52 477-529 (STRAIN AUSTRALIA-VICTORIA/32) PHEMA.sub.-- NDVB HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS 1-49 (STRAIN BEAUDETTE C/45) PHEMA.sub.-- NDVD HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS 1-52 (STRAIN D26/76) PHEMA.sub.-- NDVM HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS 1-52 (STRAIN MIYADERA/51) PHEMA.sub.-- NDVQ HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS 1-52 (STRAIN QUEENSLAND/66) PHEMA.sub.-- NDVTG HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS 1-49 (STRAIN TEXAS G B/48) PHEMA.sub.-- NDVU HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS 1-52 (STRAIN ULSTER/67) PHEMA.sub.-- PHODV HEMAGGLUTININ-NEURAMINIDASE PHOCINE DISTEMPER VIRUS 39-73 PHEMA.sub.-- PI1HW HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 1 VIRUS 66-110 (STRAIN WASHINGTON/1957) PHEMA.sub.-- PI2H HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 2 VIRUS 247-281 PHEMA.sub.-- PI2HT HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 2 VIRUS 247-281 (STRAIN TOSHIBA) PHEMA.sub.-- PI3B HEMAGGLUTININ-NEURAMINIDASE BOVINE PARAINFLUENZA 3 VIRUS 38-93 PHEMA.sub.-- PI3H4 HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS 13-110 394-428 (STRAIN NIH 47885) PHEMA.sub.-- PI3HA HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS 20-110 394-428 (STRAIN AUS/124854/74) PHEMA.sub.-- PI3HT HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS 13-110 394-428 (STRAIN TEX/545/80) PHEMA.sub.-- PI3HU HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS 13-110 394-428 (STRAIN TEX/9305/82) PHEMA.sub.-- PI3HV HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS 13-110 394-428 (STRAIN TEX/12677/83) PHEMA.sub.-- PI3HW HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS 13-110 394-428 (STRAIN WASH/641/79) PHEMA.sub.-- PI3HX HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS 13-110 394-428 (STRAIN WASH/1511/73) PHEMA.sub.-- PI4HA HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 4A VIRUS 54-88 (STRAIN TOSHIBA) PHEMA.sub.-- RACVI HEMAGGLUTININ PRECURSOR RACCOON POXVIRUS 166-214 256-290 PHEMA.sub.-- RINDK HEMAGGLUTININ-NEURAMINIDASE RINDERPEST VIRUS (STRAIN KABETE O) 46-87 PHEMA.sub.-- RINDL HEMAGGLUTININ-NEURAMINIDASE RINDERPEST VIRUS (STRAIN L) 46-87 191-225 PHEMA.sub.-- SEND5 HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 57-110 PHEMA.sub.-- SENDF HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN FUSHIMI) 57-110 PHEMA.sub.-- SENDH HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN HARRIS) 57-110 PHEMA.sub.-- SENDJ HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN HVJ) 57-110 PHEMA.sub.-- SENDZ HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN Z) 57-110 PHEMA.sub.-- SV41 HEMAGGLUTININ-NEURAMINIDASE SIMIAN VIRUS 41 18-52 387-421 PHEMA.sub.-- SV5 HEMAGGLUTININ-NEURAMINIDASE SIMIAN VIRUS 5 (STRAIN W3) 27-82 PHEMA.sub.-- SV5LN HEMAGGLUTININ-NEURAMINIDASE SIMIAN VIRUS 5 (ISOLATE HUMAN/LN) 27-82 PHEMA.sub.-- VARV HEMAGGLUTININ PRECURSOR VARIOLA VIRUS 177-211 PHEX3.sub.-- ADE02 PERIPENTONAL HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 2 90-134 PROTEIN PHEX3.sub.-- ADE05 PERIPENTONAL HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 5 90-134 PROTEIN PHEX9.sub.-- ADE02 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 2 85-134 PHEX9.sub.-- ADE05 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 5 85-134 PHEX9.sub.-- ADE07 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 7, 93-138 AND HUMAN ADENOVIRUS TYPE PHEX9.sub.-- ADE12 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 12 88-137 PHEX9.sub.-- ADE41 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 41 67-126 PHEX9.sub.-- ADEC2 HEXON-ASSOCIATED PROTEIN CANINE ADENOVIRUS TYPE 2 53-103 PHEX9.sub.-- ADENT HEXON-ASSOCIATED PROTEIN TUPAIA ADENOVIRUS 61-109 PHEX.sub.-- ADE02 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 2 341-386 433-467 583-624 PHEX.sub.-- ADE05 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 5 330-379 PHEX.sub.-- ADE40 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 40 303-352 408-449 553-587 PHEX.sub.-- ADE41 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 41 306-355 555-589 PHEX.sub.-- ADEB3 HEXON PROTEIN BOVINE ADENOVIRUS TYPE 3 301-346 385-419 544-578 705-739 PHRG.sub.-- COWPX HOST RANGE PROTEIN COWPOX VIRUS 320-395 455-489 PI226.sub.-- ASFB7 LATE PROTEIN 1226R AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 110-151 PIBMP.sub.-- CAMV4 INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D4) 3-44 378-419 PIBMP.sub.-- CAMVB INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BARI 1) 379-420 PIBMP.sub.-- CAMVC INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841) 3-37 378-419 PIBMP.sub.-- CAMVD INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 3-44 378-419 PIBMP.sub.-- CAMVE INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC) 3-37 378-419 PIBMP.sub.-- CAMVJ INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS 3-37 378-419 (STRAIN S-JAPAN) PIBMP.sub.-- CAMVN INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 3-37 378-419 PIBMP.sub.-- CAMVP INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN PV147) 3-37 378-419 PIBMP.sub.-- CAMVS INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS 3-37 378-419 (STRAIN STRASBOURG) PIBMP.sub.-- CERV INCLUSION BODY MATRIX PROTEIN CARNATION ETCHED RING VIRUS 3-37 PIBMP.sub.-- FMVD INCLUSION BODY MATRIX PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 1-51 372-406 PIBMP.sub.-- SOCMV INCLUSION BODY MATRIX PROTEIN 1-48 132-179 PIC18.sub.-- HCMVA PROBABLE PROCESSING AND TRANSPORT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 53-98 290-324 498-532 PROTEIN PIC18.sub.-- HSV11 PROCESSING AND TRANSPORT PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 331-365 PIC18.sub.-- HSV1A PROCESSING AND TRANSPORT PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/ 331-365 STRAIN ANGELOTTI) PIC18.sub.-- HSV1F PROCESSING AND TRANSPORT PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F) 324-362 PIC18.sub.-- HSVB2 PROBABLE PROCESSING AND TRANSPORT BOVINE HERPESVIRUS TYPE 2 (STRAIN BMV) 466-500 PROTEIN PIC18.sub.-- HSVEB PROBABLE PROCESSING AND TRANSPORT HERPESVIRUS TYPE 1 (ISOLATE HVS25A) 341-375 PROTEIN PIC18.sub.-- HSVSA PROBABLE PROCESSING AND TRANSPORT HERPESVIRUS SAIMIRI (STRAIN 11) 58-99 361-395 PROTEIN PIC18.sub.-- MCMVS PROBABLE PROCESSING AND TRANSPORT MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 60-112 290-340 647-691 PROTEIN PIC18.sub.-- PRVIF PROBABLE PROCESSING AND TRANSPORT PSEUDORABIES VIRUS 299-333 303-337 PROTEIN (STRAIN INDIANA-FUNKHAUSER/BECKE PICP0.sub.-- HSVBJ TRANS-ACTING TRANSCRIPTIONAL BOVINE HERPESVIRUS TYPE 1 (STRAIN JURA) 190-224 PROTEIN ICP0 PICP0.sub.-- HSVBK TRANS-ACTING TRANSCRIPTIONAL BOVINE HERPESVIRUS TYPE 1 (STRAIN K22) 190-224 PROTEIN ICP0 PICP4.sub.-- HSVMG TRANS-ACTING TRANSCRIPTIONAL MAREK'S DISEASE HERPESVIRUS (STRAIN GA) 1022- ACTIVATOR PR 1056 PICP4.sub.-- VZVD TRANS-ACTING TRANSCRIPTIONAL VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 920-954 PROTEIN ICP4 PIE63.sub.-- HCMVA TRANSCRIPTIONAL REGULATOR IE63 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 207-241 HOMOLOG PIE63.sub.-- HSV11 TRANSCRIPTIONAL REGULATOR IE63 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 241-275 PIE63.sub.-- HSVEB TRANSCRIPTIONAL REGULATOR IE63 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 282-316 HOMOLOG PIE63.sub.-- VZVD TRANSCRIPTIONAL REGULATOR IE63 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 195-229 258-306 HOMOLOG PIE68.sub.-- HSVE4 IMMEDIATE-EARLY PROTEIN IE68 EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 87-121 PIE68.sub.-- HSVEB IMMEDIATE-EARLY PROTEIN IE68 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 99-133 PIE68.sub.-- HSVSA IMMEDIATE-EARLY PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 48-85 PIR05.sub.-- HCMVA HYPOTHETICAL PROTEIN IRL5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169).sub.-- 13-47 PIR12.sub.-- HCMVA HYPOTHETICAL PROTEIN IRL12 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 74-162 PKABL.sub.-- FSVHY TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 280-314 TRANSFORMING PROT (STRAIN HARDY-ZUCKERMAN 2) PKABL.sub.-- MLVAB TYROSINE-PROTEIN KINASE ABELSON MURINE LEUKEMIA VIRUS 217-251 TRANSFORMING PROT PKAKT.sub.-- MLVAT AKT KINASE TRANSFORMING PROTEIN AKT8 MURINE LEUKEMIA VIRUS 172-227 263-304 PKFES.sub.-- FSVGA TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 23-64 104-178 TRANSFORMING PROT (STRAIN GARDNER-ARNSTEIN) PKFGR.sub.-- FSVGR TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 218-252 TRANSFORMING PROT (STRAIN GARDNER-RASHEED) PKFMS.sub.-- FSVMD FMS TYROSINE KINASE TRANSFORMING FELINE SARCOMA VIRUS 313-362 638-679 812-849 PROTEIN (STRAIN MCDONOUGH) PKFPS.sub.-- AVISP TYROSINE-PROTEIN KINASE AVIAN SARCOMA VIRUS (STRAIN PRCII) 65-99 TRANSFORMING PROT PKFPS.sub.-- FUJSV TYROSINE-PROTEIN KINASE FUJINAMI SARCOMA VIRUS 65-99 152-251 348-398 TRANSFORMING PROT PKITH.sub.-- AMEPV THYMIDINE KINASE AMSACTA MOOREI ENTOMOPOXVIRUS 47-81 PKITH.sub.-- CAPVK THYMIDINE KINASE CAPRIPOXVIRUS (STRAIN KS-1 38-82 PKITH.sub.-- EBV THYMIDINE KINASE EPSTEIN-BARR VIRUS (STRAIN B95-8) 228-262 431-472 PKITH.sub.-- HSV11 THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 90-124 PKITH.sub.-- HSV1C THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN CL101) 90-124 PKITH.sub.-- HSV1E THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN HFEM) 90-124 PKITH.sub.-- HSV1K THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 90-124 PKITH.sub.-- HSV1S THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN SC16) 90-124 PKITH.sub.-- HSV23 THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 333) 91-125 PKITH.sub.-- HSVBM THYMIDINE KINASE BOVINE HERPES VIRUS TYPE 3 (STRAIN WC11) 616-665 PKITH.sub.-- HSVE4 THYMIDINE KINASE EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 19-53 178-219 PKITH.sub.-- HSVEB THYMIDINE KINASE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 19-53 178-230 PKITH.sub.-- HSVF THYMIDINE KINASE FELINE HERPESVIRUS (FELID HERPESVIRUS 1) 180-214 PKITH.sub.-- HSVMR THYMIDINE KINASE MARMOSET HERPESVIRUS 52-86 PKITH.sub.-- HSVSA THYMIDINE KINASE HERPESVIRUS SAIMIRI (STRAIN 11) 337-389 PKITH.sub.-- PRVN3 THYMIDINE KINASE PSEUDORABIES VIRUS (STRAIN NIA-3) 161-202 PKMIL.sub.-- AVIMH MIL SERINE/THREONINE-PROTEIN KINASE AVIAN RETROVIRUS MH2 69-103 TRANSF PKR15.sub.-- HSVI1 GENE 15 PROTEIN KINASE ICTALURID HERPESVIRUS 1 190-224 PKR2.sub.-- HSVI1 PROBABLE SERINE/THREONINE-PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 57-91 281-315 KINASE PKR74.sub.-- HSVI1 GENE 74 PROTEIN KINASE ICTALURID HERPESVIRUS 1 487-528 597-631 PKRAF.sub.-- MSV36 RAF SERINE/THREONINE-PROTEIN MURINE SARCOMA VIRUS 3611 11-45 KINASE TRANSF PKRB1.sub.-- VACCC 30 KD PROTEIN KINASE HOMOLOG VACCINIA VIRUS (STRAIN COPENHAGEN) 127-168 PKRB1.sub.-- VACCV 30 KD PROTEIN KINASE HOMOLOG VACCINIA VIRUS (STRAIN WR) 127-168 PKRB1.sub.-- VARV 30 KD PROTEIN KINASE HOMOLOG VARIOLA VIRUS 123-171 PKRB2.sub.-- VACCC POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STRAIN COPENHAGEN) 147-181 PKRB2.sub.-- VACCV POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STRAIN WR) 147-181 PKRF1.sub.-- VACCC POSSIBLE PROTEIN KINASE F10 VACCINIA VIRUS (STRAIN COPENHAGEN) 169-203 PKRF1.sub.-- VACCP POSSIBLE PROTEIN KINASE F10 VACCINIA VIRUS (STRAIN L-1VP) 136-170 PKRF1.sub.-- VARV POSSIBLE PROTEIN KINASE F10 VARIOLA VIRUS 169-203 PKROS.sub.-- AVISU ROS TYROSINE KINASE TRANSFORMING AVIAN SARCOMA VIRUS (STRAIN UR2) 111-145 PROTEIN PKRYK.sub.-- AVIR3 TYROSINE-PROTEIN KINASE AVIAN RETROVIRUS RPL30 15-66 TRANSFORMING PROT PKTHY.sub.-- VACCV THYMIDYLATE KINASE VACCINIA VIRUS (STRAIN WR) 135-169 (STRAIN COPENHAGEN) PKYES.sub.-- AVISY TYROSINE-PROTEIN KINASE AVIAN SARCOMA VIRUS (STRAIN Y73) 174-233 TRANSFORMING PROT PL100.sub.-- ADE02 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 441-475 PL100.sub.-- ADE05 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 223-264 PL100.sub.-- ADE40 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 40 191-232 408-442 PL100.sub.-- ADE41 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 41 199-233 PL52.sub.-- ADE02 LATE L1 52 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 238-284 301-349 PL52.sub.-- ADE05 LATE L1 52 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 238-284 301-349 PLMP2.sub.-- EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 144-179 294-338 PMCEL.sub.-- SFVKA MRNA CAPPING ENZYME SHOPE FIBROMA VIRUS (STRAIN KASZA) 54-152 622-656 PMCEL.sub.-- VACCC MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN COPENHAGEN) 1-41 623-657 PMCEL.sub.-- VACCV MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN WR) 1-41 623-657 PMCEL.sub.-- VARV MRNA CAPPING ENZYME VARIOLA VIRUS 1-39 623-657 PMCES.sub.-- VACCC MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN COPENHAGEN) 72-137 245-286 PMCES.sub.- - VACCV MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN WR) 72-137 245-286 PMCES.sub.-- VARV MRNA CAPPING ENZYME VARIOLA VIRUS 72-137 245-286 PMCE.sub.-- ASFB7 MRNA CAPPING ENZYME AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 116-157 279-313 738-772 PMOVP.sub.-- ORSV MOVEMENT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 53-90 PMOVP.sub.-- PPMVS MOVEMENT PROTEIN PEPPER MILD MOTTLE VIRUS (STRAIN SPAIN) 26-66 PMOVP.sub.-- TMGMV MOVEMENT PROTEIN TOBACCO MILD GREEN MOSAIC VIRUS 29-66 (TMV STRAIN U2) PMOVP.sub.-- TMVTO MOVEMENT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN TOMATO/L) 32-66 PMOVP.sub.-- TOMVA MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LIIA) 32-80 PMOVP.sub.-- TOMVL MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LII) 32-80 PMTC1.sub.-- CHVN1 MODIFICATION METHYLASE CVIBI CHLORELLA VIRUS NC-1A 222-256 PMTC2.sub.-- CHVP1 MODIFICATION METHYLASE CVIAII PARAMECIUM BURSARIA CHLORELLA VIRUS 1 116-164 PMYC.sub.-- AVIM2 MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS CMII 229-266 375-419 PMYC.sub.-- AVIMC MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS MC29 230-267 376-420 PMYC.sub.-- AVIMD MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS HBI 230-267 376-420 PMYC.sub.-- AVIME MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS MH2E21 377-421 PMYC.sub.-- AVIOK MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS OK10 224-261 370-414 PMYC.sub.-- FLV MYC TRANSFORMING PROTEIN FELINE LEUKEMIA VIRUS 393-437 PMYC.sub.-- FLVTT MYC TRANSFORMING PROTEIN FELINE LEUKEMIA PROVIRUS FTT 393-437 PNCA2.sub.-- CVMA5 NUCLEOCAPSID PROTEIN MURINE CORONAVIRUS MHV (STRAIN A59) 12-46 PNCAP.sub.-- AINOV NUCLEOCAPSID PROTEIN AINO VIRUS 177-211 PNCAP.sub.-- BEV NUCLEOCAPSID PROTEIN BERNE VIRUS 46-83 122-156 PNCAP.sub.-- BRSVA NUCLEOCAPSID PROTEIN BOVINE RESPIRATOR SYNCYTIAL VIRUS 62-108 163-200 248-303 343-383 (STRAIN A51908) PNCAP.sub.-- BUNGE NUCLEOCAPSID PROTEIN BUNYAVIRUS GERMISTON 176-228 PNCAP.sub.-- BUNLC NUCLEOCAPSID PROTEIN BUNYAVIRUS LA CROSSE 176-229 PNCAP.sub.-- BUNSH NUCLEOCAPSID PROTEIN BUNYAVIRUS SNOWSHOE HARE 176-229 PNCAP.sub.-- BUNYW NUCLEOCAPSID PROTEIN BUNYAMWERA VIRUS 175-228 PNCAP.sub.-- CCHFV NUCLEOCAPSID PROTEIN CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS 223-306 427-461 (ISOLATE C6803 PNCAP.sub.-- CDVO NUCLEOCAPSID PROTEIN CANINE DISTEMPER VIRUS 137-174 179-217 354-402 (STRAIN ONDERSTEPOORT) PNCAP.sub.-- CHAV NUCLEOCAPSID PROTEIN CHANDIPURA VIRUS (STRAIN I653514) 40-84 321-369 PNCAP.sub.-- CVBF NUCLEOCAPSID PROTEIN BOVINE CORONAVIRUS (STRAIN F15) 349-383 PNCAP.sub.-- CVBM NUCLEOCAPSID PROTEIN BOVINE CORONAVIRUS (STRAIN MEBUS) 349-383 PNCAP.sub.-- CVCAE NUCLEOCAPSID PROTEIN CANINE ENTERIC CORONAVIRUS (STRAIN K378) 165-227 PNCAP.sub.-- CVHOC NUCLEOCAPSID PROTEIN HUMAN CORONAVIRUS (STRAIN OC43) 349-383 PNCAP.sub.-- CVMJH NUCLEOCAPSID PROTEIN MURINE CORONAVIRUS MHV (STRAIN JHM) 12-46 PNCAP.sub.-- CVPFS NUCLEOCAPSID PROTEIN PORCINE TRANSMISSIBLE GASTROENTERITIS 149-206 CORONAVIRUS (S PNCAP.sub.-- CVPPU NUCLEOCAPSID PROTEIN PORCINE TRANSMISSIBLE GASTROENTERITIS 165-227 CORONAVIRUS (S PNCAP.sub.-- CVPRS NUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 149-228 (STRAIN 86/137004/BRIT PNCAP.sub.-- CVPRM NUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 149-228 (STRAIN RM4) PNCAP.sub.-- CVRSD NUCLEOCAPSID PROTEIN RAT CORONAVIRUS (STRAIN 681) 12-46 PNCAP.sub.-- CVTKE NUCLEOCAPSID PROTEIN TURKEY ENTERIC CORONAVIRUS 349-383 PNCAP.sub.-- DUGBV NUCLEOCAPSID PROTEIN DUGBE VIRUS 230-306 PNCAP.sub.-- FIPV NUCLEOCAPSID PROTEIN FELINE INFECTIOUS PERITONITIS VIRUS 151-206 (STRAIN 79-1146) PNCAP.sub.-- HANTV NUCLEOCAPSID PROTEIN HANTAAN VIRUS (STRAIN 76-118) 1-35 40-74 333-381 PNCAP.sub.-- HAZVJ NUCLEOCAPSID PROTEIN HAZARA VIRUS (ISOLATE JC280) 233-297 PNCAP.sub.-- HRSV1 NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 62-145 163-200 248-303 343-380 (SUBGROUP B/STRAI PNCAP.sub.-- HRSVA NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 62-145 163-200 248-303 343-380 (STRAIN A2) PNCAP.sub.-- IBVG NUCLEOCAPSID PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 186-227 (STRAIN GRAY) PNCAP.sub.-- IBVK NUCLEOCAPSID PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 186-220 (STRAIN KB8523) PNCAP.sub.-- JUNIN NUCLEOCAPSID PROTEIN JUNIN ARENAVIRUS 96-151 PNCAP.sub.-- LASSG NUCLEOCAPSID PROTEIN LASSA VIRUS (STRAIN GA391) 65-113 126-174 PNCAP.sub.-- LASSJ NUCLEOCAPSID PROTEIN LASSA VIRUS (STRAIN JOSIAH) 65-113 122-174 467-504 PNCAP.sub.-- LDV NUCLEOCAPSID PROTEIN LACTATE DEHYDROGENASE-ELEVATING VIRUS( 3-40 PNCAP.sub.-- LYCVA NUCLEOCAPSID PROTEIN LYMPHOCYTIC CHORIOMENINGITIS VIRUS 45-117 460-497 (STRAIN ARMSTRON PNCAP.sub.-- LYCVW NUCLEOCAPSID PROTEIN LYMPHOCYTIC CHORIOMENINGITIS VIRUS 45-79 83-117 460-497 (STRAIN WE) PNCAP.sub.-- MAGV NUCLEOCAPSID PROTEIN MAGUARI VIRUS 175-228 PNCAP.sub.-- MEASE NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN EDMONSTON) 188-226 363-411 PNCAP.sub.-- MEASH NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN HALLE) 188-226 363-411 PNCAP.sub.-- MEASI NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN IP-3-CA) 188-226 363-411 PNCAP.sub.-- MEASY NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN YAMAGATA-1) 188-226 363-411 PNCAP.sub.-- MOPEI NUCLEOCAPSID PROTEIN MOPEIA VIRUS 65-106 471-505 PNCAP.sub.-- MUMP1 NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAIN SBL-1) 214-255 500-534 PNCAP.sub.-- MUMPM NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 214-255 PNCAP.sub.-- PHV NUCLEOCAPSID PROTEIN PROSPECT HILL VIRUS 1-35 40-74 337-392 PNCAP.sub.-- P11HC NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 212-272 441-510 PNCAP.sub.-- P11HW NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 212-272 441-510 (STRAIN WASHINGTON/1957) PNCAP.sub.-- P12HT NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 214-266 344-378 (STRAIN TOSHIBA) PNCAP.sub.-- P13B NUCLEOCAPSID PROTEIN BOVINE PARAINFLUENZA 3 VIRUS 200-403 446-490 PNCAP.sub.-- P13H4 NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 3 VIRUS 87-135 208-266 344-403 440-491 (STRAIN NIH 47885) PNCAP.sub.-- P14HA NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 4A VIRUS 58-94 191-267 (STRAIN TOSHIBA) PNCAP.sub.-- P14HB NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 4B VIRUS 58-94 191-267 (STRAIN 68-333) PNCAP.sub.-- PIARV NUCLEOCAPSID PROTEIN PICHINDE ARENAVIRUS 65-112 PNCAP.sub.-- PIRYV NUCLEOCAPSID PROTEIN PIRY VIRUS 71-116 325-359 PNCAP.sub.-- PUUMH NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN HALLNAS B1) 1-35 40-75 337-392 PNCAP.sub.-- PUUMS NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN SOTKAMO) 1-35 40-75 337-385 PNCAP.sub.-- PVM NUCLEOCAPSID PROTEIN PNEUMONIA VIRUS OF MICE 93-141 248-303 344-388 PNCAP.sub.-- RABVA NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN AVO1) 133-167 PNCAP.sub.-- SEND5 NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 212-272 345-404 PNCAP.sub.-- SENDE NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN ENDERS) 212-272 345-404 PNCAP.sub.-- SENDZ NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z) 212-272 345-408 PNCAP.sub.-- SEOUS NUCLEOCAPSID PROTEIN SEOUL VIRUS (STRAIN SR-11) 1-35 40-74 333-381 PNCAP.sub.-- SV41 NUCLEOCAPSID PROTEIN SIMIAN VIRUS 41 215-267 372-406 418-466 PNCAP.sub.-- SYNV NUCLEOCAPSID PROTEIN SONCHUS YELLOW NET VIRUS 332-366 PNCAP.sub.-- TACV NUCLEOCAPSID PROTEIN TACARIBE VIRUS 50-84 230-264 PNCAP.sub.-- TOSV NUCLEOCAPSID PROTEIN TOSCANA VIRUS 215-249 PNCAP.sub.-- TSWVB NUCLEOCAPSID PROTEIN TOMATO SPOTTED WILT VIRUS 79-120 (BRAZILIAN ISOLATE CPNH1/BR PNCAP.sub.-- TSWVH NUCLEOCAPSID PROTEIN TOMATO SPOTTED WILT VIRUS 79-120 (HAWAIIAN ISOLATE) PNCAP.sub.-- TSWVL NUCLEOCAPSID PROTEIN TOMATO SPOTTED WILT VIRUS (STRAIN L3) 79-120 PNCAP.sub.- - UUK NUCLEOCAPSID PROTEIN UUKUNIEMI VIRUS 51-102 PNCAP.sub.-- VHSV0 NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 249-325 (STRAIN 07-71) PNCAP.sub.-- VHSVM NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 142-180 249-325 (STRAIN MAKAH) PNCAP.sub.-- VSVIG NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS 42-108 (SEROTYPE INDIANA/STRAIN G PNCAP.sub.-- VSVJO NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS 67-115 (SEROTYPE NEW JERSEY/STRA PNCAP.sub.-- VSVSJ NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS 42-115 (STRAIN SAN JUAN) PNEF.sub.-- HV2BE NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 7-48 (ISOLATE BEN) PNEF.sub.-- HV2D1 NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 7-41 (ISOLATE D194) PNEF.sub.-- HV2RO NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 112-160 (ISOLATE ROD) PNEF.sub.-- HV2SB NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 109-150 (ISOLATE SBLISHY) PNEF.sub.-- HV2ST NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 108-149 (ISOLATE ST) PNEF.sub.-- SIVAI NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 96-140 (ISOLATE AGM/CLONE GR1 PNEF.sub.-- SIVS4 NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 9-43 233-267 (F236/SMH4 ISOLATE) PNRAM.sub.-- IABDA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 47-81 BLACK DUCK/AUSTRALIA/702/78 PNRAM.sub.-- IACAO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 33-74 CAMEL/MONGOLIA/82) PNRAM.sub.-- IACHI NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-91 CHILE/1/83) PNRAM.sub.-- IACKQ NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 349-383 CHICKEN/PENNSYLVANIA/1370/ PNRAM.sub.-- IACKR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 349-383 CHICKEN/PENNSYLVANIA/8125/ PNRAM.sub.-- IADGE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 14-48 DUCK/GERMANY/49) PNRAM.sub.-- IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 14-48 194-229 FOWL PLAGUE VIRUS/WEYBRID PNRAM.sub.-- IAHCO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 10-47 193-227 EQUINE/COR/16/74 PNRAM.sub.-- IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 5-44 361-402 EQUINE/KENTUCKY/1/81) PNRAM.sub.-- IAKIE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-91 KIEV/59/79) PNRAM.sub.-- IALEN NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-91 LENINGRAD/54/1) PNRAM.sub.-- IAME1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-88 MEMPHIS/1/71H-A/BELLAMY/42N PNRAM.sub.-- IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-91 RUDDY TURNSTONE/NEW JERSE PNRAM.sub.-- IASH2 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 10-44 SHEARWATER/AUSTRALIA/72) PNRAM.sub.-- IATKR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 7-41 TURKEY/OREGON/71) PNRAM.sub.-- IATRA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-83 TERN/AUSTRALIA/G70C/75) PNRAM.sub.-- IAUSS NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-91 USSR/90/77) PNRAM.sub.-- IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-91 WHALE/MAINE/1/84) PNRAM.sub.-- INBBE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-46 348-382 BEIJING/1/87) PNRAM.sub.-- INBHK NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-46 349-383 HONG KONG/8/73) PNRAM.sub.-- INBLE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-46 349-383 LEE/40) PNRAM.sub.-- INBLN NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-39 348-382 LENINGRAD/179/86),STRAIN B/M PNRAM.sub.-- INBMD NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-39 349-383 MARYLAND/59) PNRAM.sub.-- INBMF NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-46 348-382 MEMPHIS/3/89) PNRAM.sub.-- INBOR NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-46 349-383 OREGON/5/80) PNRAM.sub.-- INBSI NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-39 349-383 SINGAPORE/222/79) PNRAM.sub.-- INBUS NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-39 349-383 USSR/100/83) PNRAM.sub.-- INBVI NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-39 348-382 VICTORIA/3/85 PNS2.sub.-- SIDEV PROBABLE STRUCTURAL PROTEIN BOMBYX DENSONUCLEOSIS VIRUS 790-828 PRECURSOR PNSS.sub.-- INSVN NON-STRUCTURAL PROTEIN IMPATIENS NECROTIC SPOT VIRUS 95-129 204-238 (STRAIN NL-07) PNSS.sub.-- TSWVB NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS 3-37 (BRAZILIAN ISOLATE CPNH1/BR PNSS.sub.-- TSWVL NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS 3-37 (STRAIN L3) PNTP1.sub.-- AMEPV NUCLEOSIDE TRIPHOSPHATASE I AMSACTA MOOREI ENTOMOPOXVIRUS 28-69 110-144 PNTP1.sub.-- CBEPV NUCLEOSIDE TRIPHOSPHATASE I CHORISTONEURA BIENNIS ENTOMOPOXVIRUS 122-169 415-449 514-555 PNTP1.sub.-- VACCC NUCLEOSIDE TRIPHOSPHATASE I VACCINIA VIRUS (STRAIN COPENHAGEN) 56-90 248-289 549-599 PNTP1.sub.-- VACCV NUCLEOSIDE TRIPHOSPHATASE I VACCINIA VIRUS (STRAIN WR) 56-90 248-289 549-599 PNTP1.sub.-- VARV NUCLEOSIDE TRIPHOSPHATASE I VARIOLA VIRUS 154-195 455-505 PP100.sub.-- HSV6U MAJOR ANTIGENIC STRUCTURAL PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/ 189-223 689-735 STRAIN UGANDA-1102) PPAP1.sub.-- VACCC POLY(A) POLYMERASE CATALYTIC VACCINIA VIRUS (STRAIN COPENHAGEN) 121-180 SUBUNIT PPAP1.sub.-- VACCV POLY(A) POLYMERASE CATALYTIC VACCINIA VIRUS (STRAIN WR) 121-180 SUBUNIT PPAP1.sub.-- VARV POLY(A) POLYMERASE CATALYTIC VARIOLA VIRUS 121-180 SUBUNIT PPAP2.sub.-- CAPVK POLY(A) POLYMERASE REGULATORY CAPRIPOXVIRUS (STRAIN KS-1) 112-146 SUBUNIT PPAP2.sub.-- FOWPV POLY(A) POLYMERASE REGULATORY FOWLPOX VIRUS 95-154 SUBUNIT PPAP2.sub.-- VACCC POLY(A) POLYMERASE REGULATORY VACCINIA VIRUS (STRAIN COPENHAGEN) 203-249 SUBUNIT PPAP2.sub.-- VACCV POLY(A) POLYMERASE REGULATORY VACCINIA VIRUS (STRAIN WR) 203-249 SUBUNIT PPAP2.sub.-- VARV POLY(A) POLYMERASE REGULATORY VARIOLA VIRUS 203-249 SUBUNIT PPE12.sub.-- NPVAC 12.1 KD PROTEIN IN PE 5'REGION AUTOGRAPHA CALIFORNICA NUCLEAR 15-56 60-105 POLYHEDROSIS VIRUS PPE12.sub.-- NPVOP 11.5 KD PROTEIN IN P26 5'REGION ORGYIA PSEUDOTSUGATA MULTICAPSID 11-98 POLYHEDROSIS VIRUS PPE38.sub.-- NPVAC MAJOR IMMEDIATE EARLY PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 19-77 197-249 POLYHEDROSIS VIRUS PPE38.sub.-- NPVOP MAJOR IMMEDIATE EARLY PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 190-240 POLYHEDROSIS VIRUS PPE48.sub.-- NPVAC 48.3 KD PROTEIN IN PE-P26 AUTOGRAPHA CALIFORNICA NUCLEAR 4-42 48-89 97-131 INTERGENIC REGION POLYHEDROSIS VIRUS PPE48.sub.-- NPVOC 47.3 KD PROTEIN IN PE-P26 ORGYIA PSEUDOTSUGATA MULTICAPSID 47-82 165-199 INTERGENIC REGION POLYHEDROSIS VIRUS PPIV2.sub.-- ADE07 MATURATION PROTEIN HUMAN ADENOVIRUS TYPE 7 414-448 PPIV6.sub.-- ADE02 PROTEIN VI PRECURSOR HUMAN ADENOVIRUS TYPE 2 37-71 PPIV6.sub.-- ADE05 PROTEIN VI PRECURSOR HUMAN ADENOVIRUS TYPE 5 37-71 PPOL1.sub.-- BAYMG GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 329-363 743-777 957-991 1265- 2229- 2309- 2368- (GERMAN ISOLATE) 1299 2266 2352 2404 PPOL1.sub.-- BAYMJ GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 329-363 671-705 743-777 957-994 1265- 2227- 2307- 2366 (JAPANESE STRAIN 11-1) 1299 2264 2350 PPOL1.sub.-- GCMV RNA1 POLYPROTEIN HUNGARIAN GRAPEVINE CHROME MOSAIC 120-161 165-216 230-273 377-415 VIRUS PPOL1.sub.-- GFLV RNA1 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 170-212 480-519 636-677 691-725 1157- 1378- 1906- 1196 1412 1943 PPOL1.sub.-- TBRVS RNA1 POLYPROTEIN TOMATO BLACK RING VIRUS (STRAIN S) 223-270 929-977 PPOL1.sub.-- TRSVR RNA1 POLYPROTEIN TOMATO RINGSPOT VIRUS 161-206 (ISOLATE RASPBERRY) PPOL2.sub.-- BAYMG GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 240-281 669-732 739-773 787-828 (GERMAN ISOLATE) PPOL2.sub.-- BAYMU GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 669-732 739-773 787-828 (JAPANESE STRAIN II-1) PPOL2.sub.-- GFLV RNA2 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 365-406 542-602 PPOL2.sub.-- TBRVS RNA2 POLYPROTEIN TOMATO BLACK RING VIRUS (STRAIN S) 4-38 PPOL2.sub.-- TRSVR RNA2 POLYPROTEIN TOMATO RINGSPOT VIRUS 158-206 334-368 (ISOLATE RASPBERRY) PPOLG.sub.-- BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS (STRAIN VG-5-27) 849-886 1008- 1382- 1459- 1576- 1064 1416 1507 1617 PPOLG.sub.-- BVDVN GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 244-289 446-491 629-663 1033- 1303- 1392- 1869- 2226- (ISOLATE NADL) 1074 1344 1443 1910 2260 PPOLG.sub.-- BVDVS GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 245-289 446-491 629-663 1033- 1303- 1392- 1779- 2136- (STRAIN SD-1) 1074 1344 1443 1820 2170 PPOLG.sub.-- BYMV GENOME POLYPROTEIN BEAN YELLOW MOSAIC VIRUS 96-130 PPOLG.sub.-- COXA2 GENOME POLYPROTEIN COXSACKIEVIRUS A21 (STRAIN COE) 9-43 562-596 664-698 1045- 1498- 1607- 1805- 1901- 1100 1546 1648 1839 1946 PPOLG.sub.-- COXA9 GENOME POLYPROTEIN COXSACKIEVIRUS A9 (STRAIN GRIGGS) 15-49 1040- 1895- 1086 1940 PPOLG.sub.-- COXB1 GENOME POLYPROTEIN COXSACKIEVIRUS B1 15-49 1021- 1876- 1067 1921 PPOLG.sub.-- COXB3 GENOME POLYPROTEIN COXSACKIEVIRUS B3 15-49 1024- 1879- 1070 1924 PPOLG.sub.-- COXB4 GENOME POLYPROTEIN COXSACKIEVIRUS B4 15-49 642-681 1022- 1877- 1068 1922 PPOLG.sub.-- COXB5 GENOME POLYPROTEIN COXSACKIEVIRUS B5 15-49 1024- 1879- 1070 1924 PPOLG.sub.-- CYVV GENOME POLYPROTEIN CLOVER YELLOW VEIN VIRUS 120-154 PPOLG.sub.-- DEN18 GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 836-1) 74-108 PPOLG.sub.-- DEN1A GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN AHF 82-80) 74-108 PPOLG.sub.-- DEN1C GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN CV1636/77) 74-108 PPOLG.sub. -- DEN1S GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 74-108 832-873 960-994 1142- 1386- 1614- 2518- 2946- (STRAIN SINGAPORE S275/90) 1179 1420 1648 2554 3016 PPOLG.sub.-- DEN1W GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 74-108 833-874 961-995 1143- (STRAIN WESTERN PACIFIC) 1180 PPOLG.sub.-- DEN21 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (ISOLATE MALAYSIA M1) 448-492 PPOLG.sub.-- DEN22 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (ISOLATE MALAYSIA M2) 448-495 PPOLG.sub.-- DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681) 74-108 728-777 961-995 1146- 1246- 1418- 1615- 2517- 1180 1280 1452 1649 2551 PPOLG.sub.-- DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681-PDK53) 74-108 728-777 961-995 1146- 1246- 1418- 1615- 2485- 1180 1280 1452 1649 2551 PPOLG.sub.-- DEN2D GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN D2-04) 728-777 PPOLG.sub.-- DEN2H GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TH-36) 497-546 PPOLG.sub.-- DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN JAMAICA) 74-108 728-777 961-995 1146- 1246- 1418- 1615- 2517- 1180 1280 1452 1649 2551 PPOLG.sub.-- DEN2N GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN NEW GUINEA C) 213-247 398-432 PPOLG.sub.-- DEN2P GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PR159/S1) 74-108 728-777 832-875 961-995 1146- 1246- 1418- 1615- 1180 1280 1452 1649 PPOLG.sub.-- DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TONGA 1974) 448-497 552-595 681-715 866-900 966- 1205- 1000 1239 PPOLG.sub.-- DEN2U GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PUO-218) 614-663 PPOLG.sub.-- DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 830-872 959-993 1385- 2224- 2480- 2704- 2940- 2980- 1419 2258 2521 2738 2978 3014 PPOLG.sub.-- DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 957-993 1380- 2514- 2701- 2941- 2977- 1414 2555 2735 2975 3011 PPOLG.sub.-- EC11G GENOME POLYPROTEIN ECHOVIRUS 11 (STRAIN GREGORY) 213-259 1079- 1113 PPOLG.sub.-- EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 1074- 1472- 1522- 1665- 1789- 1115 1518 1570 1706 1823 PPOLG.sub.-- EMCVB GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 145-179 1076- 1474- 1524- 1667- (STRAIN EMC-B NONDIABETO 1117 1520 1572 1708 PPOLG.sub.-- EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 145-179 1076- 1474- 1524- 1667- (STRAIN EMC-D-DIABETOGEN 1117 1520 1572 1708 PPOLG.sub.-- ENMG3 GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 145-179 (STRAIN 37A) PPOLG.sub.-- ENMGO GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 78-112 PPOLG.sub.-- FMDV1 GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 221-255 294-328 578-612 1103- 1493- 2165- (STRAIN A10-61) 1153 1528 2200 PPOLG.sub.-- FMDVA GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 220-254 293-327 577-611 1103- 1493- 2164- (STRAIN A12) 1164 1528 2199 PPOLG.sub.-- FMDVO GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 221-255 1103- 1493- 2164- (STRAINS O1K AND O1BFS) 1153 1528 2199 PPOLG.sub.-- FMDVS GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 87-128 693-728 (STRAIN C1-SANTA PAU [C-S PPOLG.sub.-- FMDVT GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 221-255 283-317 577-611 (STRAIN C1) PPOLG.sub.-- HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 364-398 PPOLG.sub.-- HCVA GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN ALFORT) 440-493 626-660 695-729 1033- 1190- 1307- 1779- 2136- 1070 1235 1343 1820 2170 2466- 2525- 2667- 3057- 3152- 3406- 2500 2559 2708 3098 3193 3440 PPOLG.sub.-- HCVB GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN BRESCIA) 440-493 626-660 695-729 1033- 1173- 1779- 2136- 2388- 1070 1235 1820 2170 2436 PPOLG.sub.-- HCVBK 2466- 2525- 2667- 3057- 3152- 3406- 3521- 2500 2559 2708 3098 3195 3440 3562 PPOLG.sub.-- HCVE0 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE BK) 357-398 2328- 2365 PPOLG.sub.-- HCVH GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE EC10) 65-99 PPOLG.sub.-- HCVH4 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) 364-398 PPOLG.sub.-- HCVH7 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCV-476) 364-398 PPOLG.sub.-- HCVH8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCT27) 236-270 PPOLG.sub.-- HCVHK GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCT18) 248-282 PPOLG.sub.-- HCVJ2 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCV-KF) 357-398 PPOLG.sub.-- HCVJ5 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J2) 357-398 PPOLG.sub.-- HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J5) 364-398 PPOLG.sub.-- HCVJ7 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J6) 364-401 1716- 2082- 1750 2116 PPOLG.sub.-- HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J7) 364-398 PPOLG.sub.-- HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J8) 364-398 1716- 2082- 2468- 2538- 1750 2116 2502 2572 PPOLG.sub.-- HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE JAPANESE) 357-405 2331- 2365 PPOLG.sub.-- HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-JT) 357-391 2331- 2365 PPOLG.sub.-- HPAV2 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE TAIWAN) 357-398 2328- 2444- 2365 2503 PPOLG.sub.-- HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 24A) 2-43 101-135 203-237 870-904 1021- 1117- 1055 1151 PPOLG.sub.-- HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 43C) 2-43 101-135 203-237 870-904 1021- 1117- 1055 1151 PPOLG.sub.-- HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 18F) 2-43 101-135 203-237 870-904 1021- 1117- 1055 1151 PPOLG.sub.-- HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN CR326) 2-43 101-135 203-237 PPOLG.sub.-- HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN GA76) 80-114 182-216 PPOLG.sub.-- HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN HM-175) 2-43 101-135 203-237 870-904 1021- 1103- 1055 1151 PPOLG.sub.-- HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN LA) 2-43 101-135 203-237 870-904 1021- 1103- 1055 1151 PPOLG.sub.-- HPAVS GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN MBB) 2-43 101-135 203-237 870-904 1021- 1103- 1055 1158 PPOLG.sub.-- HPAVT GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS 6-47 105-139 207-241 849-908 1025- 1115- 1158- (STRAIN AGM-27) 1059 1155 1198 PPOLG.sub.-- HRV14 GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS 2-43 101-135 203-237 (STRAIN CY-145) PPOLG.sub.-- HRV1A GENOME POLYPROTEIN HUMAN RHINOVIRUS 14 (HRV-14) 1020- 1393- 1479- 1877- 1054 1427 1513 1920 PPOLG.sub.-- HRV1B GENOME POLYPROTEIN HUMAN RHINOVIRUS 1A (HRV-1A) 362-396 PPOLG.sub.-- HRV2 GENOME POLYPROTEIN HUMAN RHINOVIRUS 1B (HRV-1B) 387-421 863-904 1133- 1168 PPOLG.sub.-- HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS 2 (HRV-2) 856-897 1126- 1552- 1169 1593 PPOLG.sub.-- HUEV7 GENOME POLYPROTEIN HUMAN RHINOVIRUS 89 (HRV-89) 1566- 1607 PPOLG.sub.-- IBDVO GENOME POLYPROTEIN HUMAN ENTEROVIRUS 70 359-397 876-917 1032- 1403- 1896- (STRAIN J670/71) 1088 1441 1934 PPOLG.sub.-- JAEV1 STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 250-291 475-524 (STRAIN OH) PPOLG.sub.-- JAEV5 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 74-122 211-256 539-576 980- 1409- 2463- 2739- 2782- (STRAIN SA-14) 1014 1450 2497 2777 2823 3322- 3387- 3359 3428 PPOLG.sub.-- JAEVJ GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 74-122 211-256 539-576 980- 1409- 2463- 2739- 2782- (STRAIN SA(V)) 1014 1450 2497 2777 2823 3322- 3387- 3359 3428 PPOLG.sub.-- JAEVN GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 74-128 211-256 539-576 980- 1409- 2463- 2739- 2782- (STRAIN JAOARS982) 1014 1450 2497 2777 2823 3322- 3387- 3359 3428 PPOLG.sub.-- KUNJM GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 7-48 138-183 467-504 908-942 1337- (STRAIN NAKAYAMA) 1378 PPOLG.sub.-- LANVT GENOME POLYPROTEIN KUNJIN VIRUS (STRAIN MRM61C) 74-108 207-251 851-885 2464- 2528- 2740- 3325- 3389- 2498 2579 2778 3359 3423 PPOLG.sub.-- LANVY GENOME POLYPROTEIN LANGAT VIRUS (STRAIN TP21) 68-102 431-465 962-996 1431- 1932- 2536- 2967- 3003- 1472 1966 2591 3001 3037 3102- 3145 PPOLG.sub.-- LIV GENOME POLYPROTEIN LANGAT VIRUS (STRAIN YELANTSEV) 68-102 431-465 PPOLG.sub.-- LIVSB GENOME POLYPROTEIN LOUPING ILL VIRUS (LI) 68-123 231-272 431-465 PPOLG.sub.-- MCFA GENOME POLYPROTEIN LOUPING ILL VIRUS (STRAIN SB 526) 151-185 PPOLG.sub.-- MVEV GENOME POLYPROTEIN MOSQUITO CELL FUSING AGENT 80-114 908-942 2049- 2630- 3036- 3290- (CFA FLAVIVIRUS) 2087 2689 3095 3341 PPOLG.sub.-- OMV GENOME POLYPROTEIN MURRAY VALLEY ENCEPHALITIS VIRUS 67-115 209-253 853-887 979- 1408- 1013 1449 PPOLG.sub.-- PEMVC GENOME POLYPROTEIN ORNITHOGALUM MOSAIC VIRUS 418-515 946-984 1072- 1106 PPOLG.sub.-- POL1M GENOME POLYPROTEIN PEPPER MOTTLE VIRUS (CALIFORNIA ISOLATE) 55-100 207-248 377-411 704-738 827-862 877-947 1021- 1167- 1055 1201 1488- 1787- 1948- 2202- 2258- 2805- 3003- 1529 1821 1982 2236 2310 2839 3037 PPOLG.sub.-- POL1S GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY) 9-43 1046- 1414- 1500- 1806- 1902- 1101 1448 1548 1840 1947 PPOLG.sub.-- POL2L GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN SABIN) 9-43 899-933 1047- 1415- 1501- 1610- 1808- 1904- 1102 1449 1549 1651 1842 1949 PPOLG.sub.-- POL2W GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN LANSING) 9-43 897-831 1045- 1413- 1502- 1608- 1806- 1902- 1100 1447 1547 1649 1840 1947 PPOLG.sub.-- POL32 GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN W-2) 9-43 897-831 1045- 1413- 1502- 1608- 1806- 1902- 1100 1447 1547 1649 1840 1947 PPOLG.sub.-- POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAIN 23127) 9-43 896-930 1044- 1412- 1498- 1607- 1805- 1901- 1098 1446 1546 1648 1839 1946 PPOLG.sub.-- PPVD GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAINS P3/LEON/ 9-43 896-930 1044- 1412- 1498- 1607- 1805- 1901- 37 AND P3/LEON 12A[1]B) 1099 1446 1546 1648 1839 1946 PPOLG.sub.-- PPVEA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN D) 164-208 441-503 728-769 815-867 921-955 1741- 1782 PPOLG.sub.-- PPVNA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN EL AMAR) 116-157 784-818 1146- 1197 PPOLG.sub.-- PPVRA GENOME POLYPROTEIN PLUM POX POTYVIRUS (ISOLATE NAT) 164-208 403-437 440-502 727-768 814-873 920-954 1740- 1781 PPOLG.sub.-- PRSVH GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN RANKOVIC) 164-208 403-437 440-502 727-768 814-866 920-954 1740- 1781 PPOLG.sub.-- PRSVP GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 68-102 434-468 (STRAIN P/MUTANT HA) PPOLG.sub.-- PRSVW GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 325-359 (STRAIN P/MUTANT HA 5-1) PPOLG.sub.-- PSBMV GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 325-359 (STRAIN W) PPOLG.sub.-- PVYC GENOME POLYPROTEIN PEA SEED-BORNE MOSAIC (STRAIN DPD1) 253-315 355-389 529-589 935-976 984- 1080- 1588- 1808- 1018 1177 1627 1860 1971- 2379- 2712- 2870- 2015 2413 2746 2907 PPOLG.sub.-- PVYHU GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN C) 131-196 701-735 802-856 PPOLG.sub.-- PVYN GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN HUNGARIAN) 144-181 701-735 802-863 901-949 1401- 1492- 1728- 1777- 1441 1526 1772 1818 2272- 2306 PPOLG.sub.-- PVYO GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN N) 140-196 211-245 701-735 802-863 1401- 1492- 1728- 1777- 1441 1526 1772 1818 1929- 1970 PPOLG.sub.-- PWVSE GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN O) 140-196 211-245 701-735 802-856 PPOLG.sub.-- PWVTB GENOME POLYPROTEIN PASSIONFRUIT WOODINESS VIRUS 203-237 (STRAIN SEVERE) PPOLG.sub.-- PYFV1 GENOME POLYPROTEIN PASSIONFRUIT WOODINESS VIRUS 203-237 (STRAIN TIP BRIGHT) PPOLG.sub.-- STEVM GENOME POLYPROTEIN PARSNIP YELLOW FLECK VIRUS (ISOLATE P-121) 194-228 1111- 1379- 1858- 1950- 2703- 1172 1413 1899 1991 2737 PPOLG.sub.-- SVDVH GENOME POLYPROTEIN ST. LOUIS ENCEPHALITIS VIRUS (STRAIN MS1-7) 106-143 673-707 739-773 975- 1404- 1009 1438 PPOLG.sub.-- SVDVU GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS 15-49 1024- 1779- 1890- (STRAIN H/3 '76) 1070 1813 1924 PPOLG.sub.-- TBEVS GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS 15-49 1024- 1890- (STRAIN UKG/27/72) 1070 1924 PPOLG.sub.-- TBEVW GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 68-140 231-272 431-465 1158- 1431- 1929- 2182- 2535- (STRAIN SOFJIN) 1192 1472 1966 2216 2590 2965- 3051- 3100- 2999 3092 3143 PPOLG.sub.-- TEV GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 68-140 231-272 431-465 1158- 1431- 1932- 2536- 2967- (WESTERN SUBTYPE) 1192 1492 1966 2591 3001 3003- 3053- 3102- 3037 3094 3145 PPOLG.sub.-- TMEVB THEILER'S MURINE ENCEPHALOMYELITIS TOBACCO ETCH VIRUS 73-124 166-222 540-584 720-782 828-925 1148- 1416- 1494- VIRUS (S 1192 1460 1535 1668- 1747- 1792- 2395- 2787- 1702 1781 1826 2434 2821 PPOLG.sub.-- TMEVD GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS 1306- 1483- 1601- VIRUS (STRAIN BEAN 1340 1518 1635 PPOLG.sub.-- TMEVG GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS 1304- 1481- 1599- VIRUS (STRAIN DA) 1338 1516 1663 PPOLG.sub.-- TUMV GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS 1306- 1483- 1601- VIRUS (STRAIN GDVII) 1340 1518 1635 PPOLG.sub.-- TVMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS 216-259 314-362 494-528 768-839 1443- 1477 PPOLG.sub.-- WMV2 GENOME POLYPROTEIN TOBACCO VEIN MOTTLING VIRUS 34-68 408-449 667-704 761-813 851-885 969- 1031- 1643- 1017 1072 1677 1686- 2316- 2701- 2814- 1725 2374 2749 2848 PPOLG.sub.-- WNV GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II 68-105 202-236 PPOLG.sub.-- YEFV1 GENOME POLYPROTEIN WEST NILE VIRUS 74-108 207-251 847-881 973- 1413- 2461- 2525- 2737- 1007 1447 2495 2576 2775 3320- 3385- 3357 3426 PPOLG.sub.-- YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN 17D) 418-452 525-563 728-768 1388- 2231- 2477- 2958- 3097- 1444 2276 2565 2996 3143 PPOLG.sub.-- YEFV8 GENOME POLYPROTEIN YELLOW FEVER VIRUS 418-452 525-563 728-768 1388- 2231- 2477- 2958- 3097- (STRAIN PASTEUR 17D-204) 1444 2276 2565 2996 3143 PPOLH.sub.-- POL1M GENOME POLYPROTEIN YELLOW FEVER VIRUS 75-116 418-452 525-563 728-768 (STRAIN 1899/81) PPOLN.sub.-- EEVVT GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY) 9-43 1047- 1415- 1501- 1610- 1808- 1904- 1102 1449 1549 1651 1842 1949 PPOLN.sub.-- FCVC6 NONSTRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 345-382 898-932 1945- (STRAIN TRINIDAD 1979 PPOLN.sub.-- FCVF9 NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN CFI/68 FIV) 510-544 PPOLN.sub.-- HEVBU NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN F9) 4-45 369-410 986- 1023- 1020 1061 PPOLN.sub.-- HEVME NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN BURMA) 338-379 1139- 1177 PPOLN.sub.-- HEVMY NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN MEXICO) 338-379 PPOLN.sub.-- HEVPA NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN MYANMAR) 338-379 1139- 1184 PPOLN.sub.-- MIDDV NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN PAKISTAN) 337-378 1138- 1176 PPOLN.sub.-- ONNVG NONSTRUCTURAL POLYPROTEIN MIDDELBURG VIRUS 922-977 PPOLN.sub.-- RHDV NONSTRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS (STRAIN GULU) 899-933 1942- 2444- 1986 2502 PPOLN.sub.-- RRVN NON-STRUCTURAL POLYPROTEIN RABBIT HEMORRHAGIC DISEASE VIRUS 188-234 306-347 409-457 1657- 1716 PPOLN.sub.-- RRVT NONSTRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) 895-929 1928- 2414- 1962 2467 PPOLN.sub.-- RUBVT NONSTRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) 597-631 1083- 1136 PPOLN.sub.-- SFV NONSTRUCTURAL POLYPROTEIN RUBELLA VIRUS (STRAIN THERIEN) 1506- 1551- 1730- 1862- 1540 1585 1767 1896 PPOLN.sub.-- SINDO NONSTRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS 1094- 2358- 1128 2392 PPOLN.sub.-- SINDV NONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS 919-971 1491- 1961- 2444- (SUBTYPE OCKELBO/STRAIN EDSBYN 82-5) 1525 1996 2478 PPOLR.sub.-- EMPV NONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAIN HRSP) 1491- 1959- 2442- 1525 1994 2476 PPOLS.sub.-- EEEV RNA REPLICASE POLYPROTEIN EGGPLANT MOSAIC VIRUS 899-933 1127- 1161 PPOLS.sub.-- EEEV3 STRUCTURAL POLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS 372-406 914-951 PPOLS.sub.-- EEVV8 STRUCTURAL POLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS 373-407 915-952 (STRAIN VA33[TEN BRO PPOLS.sub.-- EEVVT STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1216- (STRAIN TC-83) 1250 PPOLS.sub.-- IBDV5 STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1216- (STRAIN TRINIDAD 1250 PPOLS.sub.-- IBDVA STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286 470-523 (STRAIN 52/70) PPOLS.sub.-- IBDVC STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286 470-523 (STRAIN AUSTRALI PPOLS.sub.-- IBDVE STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286 470-523 (STRAIN CU-1) PPOLS.sub.-- IBDVP NONSTRUCTURAL PROTEIN VP4 AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286 304-340 (STRAIN E) PPOLS.sub.-- IBDVS STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 115-149 212-267 451-504 (STRAIN PBG-98) PPOLS.sub.-- IPNVJ STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 249-283 470-523 (STRAIN STC) PPOLS.sub.-- IPNVN STRUCTURAL POLYPROTEIN INFECTIOUS PANCREATIC NECROSIS VIRUS 69-103 723-785 (SEROTYPE JASPER) PPOLS.sub.-- ONNVG STRUCTURAL POLYPROTEIN INFECTIOUS PANCREATIC NECROSIS VIRUS 716-786 (STRAIN N1) PPOLS.sub.-- RRV2 STRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS (STRAIN GULU) 1204- 1238 PPOLS.sub.-- RRVN STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN 213970) 35-69 PPOLS.sub.-- RRVT STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) 369-403 939-973 PPOLS.sub.-- RUBVH STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) 939-973 PPOLS.sub.-- RUBVR STRUCTURAL POLYPROTEIN RUBELLA VIRUS (VACCINE STRAIN HPV77) 999- 1036 PPOLS.sub.-- RUBVT STRUCTURAL POLYPROTEIN RUBELLA VIRUS (VACCINE STRAIN RA27/3) 999- 1036 PPOLS.sub.-- SINDO STRUCTURAL POLYPROTEIN RUBELLA VIRUS (STRAIN THERIEN) 999- 1036 PPOLS.sub.-- SINDV STRUCTURAL POLYPROTEIN SINDBIS VIRUS 362-396 (SUBTYPE OCKELBO/STRAIN EDSBYN 82-5) PPOLS.sub.-- SINDW STRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAINS HRSP AND HRLP) 362-396 PPOLS.sub.-- WEEV STRUCTURAL POLYPROTEIN SINDBIS VIRUS 34-68 (WILD TYPE SB DERIVED FROM STRAIN AR339) PPOL.sub.-- BAEVM STRUCTURAL POLYPROTEIN WESTERN EQUINE ENCEPHALITIS VIRUS 913-947 PPOL.sub.-- BLVAU POL POLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 42-80 676-743 794-832 1001- 1042 PPOL.sub.-- BLVJ POL POLYPROTEIN BOVINE LEUKEMIA VIRUS 625-673 (AUSTRALIAN ISOLATE) PPOL.sub.-- CAEVC POL POLYPROTEIN BOVINE LEUKEMIA VIRUS 625-673 (JAPANESE ISOLATE BLV-1) PPOL.sub.-- CAMVD POL POLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 879-934 (STRAIN CORK) PPOL.sub.-- COYMV ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 177-211 PPOL.sub.-- EIAV9 PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS 87-121 333-367 447-498 838-876 896-930 1310- 1351 PPOL.sub.-- EIAVC POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 513-566 1022- (CLONE 1369) 1056 PPOL.sub.-- EIAVY POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 513-566 1022- (CLONE CL22) 1056 PPOL.sub.-- FENV1 POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 512-565 1021- (ISOLATE WYOMING) 1055 PPOL.sub.-- FIVPE POL POLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1 533-600 623-659 858-899 PPOL.sub.-- FIVSD POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 429-473 606-663 (ISOLATE PETALUMA) PPOL.sub.-- FIVT2 POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 428-473 606-642 (ISOLATE SAN DIEGO) PPOL.sub.-- FMVD POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 428-472 595-662 (ISOLATE TM2) PPOL.sub.-- FOAMV ENZYMATIC POLYPROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 403-437 PPOL.sub.-- GALV POL POLYPROTEIN HUMAN SPUMARETROVIRUS (FOAMY VIRUS) 140-174 217-256 285-326 PPOL.sub.-- HTL1A POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 528-562 673-740 PPOL.sub.-- HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 670-711 (STRAIN ATK) PPOL.sub.-- HV1A2 POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 670-711 (CARIBBEAN ISOLATE) PPOL.sub.-- HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 501-537 606-664 (ARV2/SF2 ISOLATE PPOL.sub.-- HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 639-676 (BH10 ISOLATE) PPOL.sub.-- HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 618-676 (BH5 ISOLATE) PPOL.sub.-- HV1EL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 618-676 (BRU ISOLATE) PPOL.sub.-- HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 626-663 (ELI ISOLATE) PPOL.sub.-- HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 501-537 606-664 (HXB2 ISOLATE) PPOL.sub.-- HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-541 610-668 (JRCSF ISOLATE) PPOL.sub.-- HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 476-536 601-663 (MAL ISOLATE) PPOL.sub.-- HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 504-540 609-667 (MN ISOLATE) PPOL.sub.-- HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 501-537 627-664 (NEW YORK-5 ISOL PPOL.sub.-- HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 626-663 (NDK ISOLATE) PPOL.sub.-- HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 501-537 606-664 (OYI ISOLATE) PPOL.sub.-- HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 693-676 (PV22 ISOLATE) PPOL.sub.-- HV1U4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 605-663 (RF/HAT ISOLATE) PPOL.sub.-- HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 601-663 (STRAIN UGANDAN PPOL.sub.-- HV2BE POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 626-663 (Z2/CDC-Z34 ISOLA PPOL.sub.-- HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 49-83 484-582 653-687 817-851 (ISOLATE BEN) PPOL.sub.-- HV2D1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 356-390 464-562 632-666 (ISOLATE CAM2) PPOL.sub.-- HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 502-600 671-705 (ISOLATE D194) PPOL.sub.-- HV2G1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 376-410 484-526 529-577 653-687 (ISOLATE D205,7) PPOL.sub.-- HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 464-562 633-667 (ISOLATE GHANA-1) PPOL.sub.-- HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 44-78 356-390 464-529 633-667 (ISOLATE NIH-Z) PPOL.sub.-- HV2SB POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 357-391 465-563 634-668 (ISOLATE ROD) PPOL.sub.-- HV2ST POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 46-80 473-562 633-667 (ISOLATE SBLISY) PPOL.sub.-- IPHA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 484-518 522-577 653-687 (ISOLATE ST) PPOL.sub.-- JSRV PUTATIVE POL POLYPROTEIN HAMSTER INTRACISTERNAL A-PARTICLE 462-503 PPOL.sub.-- MLVAK POL POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 190-231 PPOL.sub.-- MLVAV POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 325-392 PPOL.sub.-- MLVF5 POL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 677-744 PPOL.sub.-- MLVFF POL POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 682-749 (ISOLATE 57) PPOL.sub.-- MLVFP POL POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 682-749 (ISOLATE FB29) PPOL.sub.-- MLVMO POL POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS 682-749 (ISOLATE PVC-211) PPOL.sub.-- MLVRD POL POLYPROTEIN MOLONEY MURINE LEUKEMIA VIRUS 677-744 PPOL.sub.-- MLVRK POL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 677-744 PPOL.sub.-- MPMV POL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 62-129 (STRAIN KAPLAN) PPOL.sub.-- OMVVS POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 470-504 578-613 PPOL.sub.-- RSVP POL POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV) 470-505 855-910 PPOL.sub.-- RTBV POL POLYPROTEIN ROUS SARCOMA VIRUS (STRAIN PRAGUE C) 646-684 PPOL.sub.-- RTBVP POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 7-44 59-96 101-135 176-236 325-362 433-474 1005- 1405- 1039 1439 PPOL.sub.-- SFV1 POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 7-44 59-96 101-135 176-236 325-362 433-474 1005- 1405- (ISOLATE PHILIPPINES) 1039 1439 PPOL.sub.-- SFV3L POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 349-383 427-464 494-535 PPOL.sub.-- SIVA1 POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/STRAIN LK3) 124-165 429-467 496-530 PPOL.sub.-- S1VA2 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 351-385 637-678 737-771 938-979 (AGM155 ISOLATE) PPOL.sub.-- SIVAG POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 45-86 (AGM266 ISOLATE) PPOL.sub.-- SIVAI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 477-516 642-683 742-783 (AGM3 ISOLATE) PPOL.sub.-- SIVAT POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 175-209 476-515 641-700 942-983 1020- (ISOLATE AGM/CLONE GR1 1054 PPOL.sub.-- SIVCZ POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 657-698 757-798 (TYO-1 ISOLATE) PPOL.sub.-- SIVGB POL POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 527-561 626-688 (S1V(CPZ)) PPOL.sub.-- SIVM1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 9-57 446-483 629-673 793-827 912-946 (ISOLATE GB1) PPOL.sub.-- SIVMK POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 485-519 654-688 (MM142-83 ISOLATE) PPOL.sub.-- SIVS4 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 485-519 654-688 (K6W ISOLATE) PPOL.sub.-- SIVSP POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 448-482 617-651 (F236/SMH4 ISOLATE) PPOL.sub.-- SOCMV POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 451-485 620-654 (PBJ/BC13 ISOLATE) PPOL.sub.-- SRV1 ENZYMATIC POLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 247-295 372-416 PPOL.sub.-- VILV POL POLYPROTEIN SIMIAN RETROVIRUS SRV-1 470-504 578-613 PPOL.sub.-- VILV1 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514) 489-524 874-929 PPOL.sub.-- VILV2 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/ 489-524 874-929 CLONE LV1-1KS1) PPP15.sub.-- HCMVA POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/ 489-524 874-929 CLONE LV1-1KS2) PPR73.sub.-- MMTVB LARGE STRUCTURAL PHOSPHOPROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 116-150 187-221 PP150 PPR73.sub.-- MMTVC PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 152-200 PPR73.sub.-- MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN C3H) 20-79 PPR7L.sub.-- MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 61-95 142-201 PPR7R.sub.-- MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 145-204 270-311 PPYHD.sub.-- CPVBM PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 141-200 266-307 PPYHD.sub.-- NPVAC POLYHEDRIN PRECURSOR BOMBYX MORI CYTOPLASMIC POLYHEDROSIS 13-85 VIRUS PPYHD.sub.-- NPVAS POLYHEDRIN AUTOGRAPHA CALIFORNICA NUCLEAR 13-47 POLYHEDROSIS VIRUS PPYHD.sub.-- NPVBM POLYHEDRIN AGROTIS SEGETUM NUCLEAR POLYHEDROSIS 14-48 VIRUS PPYHD.sub.-- NPVBS POLYHEDRIN BOMBYX MORI NUCLEAR POLYHEDROSIS VIRUS 12-54 PPYHD.sub.-- NPVLD POLYHEDRIN BUZURA SUPPRESSARIA NUCLEAR 14-48 POLYHEDROSIS VIRUS PPYHD.sub.-- NPVMB POLYHEDRIN LYMANTRIA DISPAR MULTICAPSID NUCLEAR 14-48 POLYHEDROSIS V PPYHD.sub.-- NPVOP POLYHEDRIN MAMESTRA BRASSICAE NUCLEAR 14-48 POLYHEDROSIS VIRUS PPYHD.sub.-- NPVOS POLYHEDRIN ORGYIA PSEUDOTSUGATA MULTICAPSID 13-47 POLYHEDROSIS VIRUS PPYHD.sub.-- NPVPF POLYHEDRIN ORGYIA PSEUDOTSUGATA SINGLE CAPSID 14-48 NUCLEAR POLYHED PPYHD.sub.-- NPVSE POLYHEDRIN PANOLIS FLAMMEA MULTIPLE NUCLEOCAPSID 14-48 POLYHEDROSIS PPYHD.sub.-- NPVSF POLYHEDRIN SPODOPTERA EXIGUA NUCLEAR POLYHEDROSIS 14-48 VIRUS (STRAIN PPYHD.sub.-- NPVSL POLYHEDRIN SPODOPTERA FRUGIPERDA NUCLEAR 14-48 POLYHEDROSIS VIRUS PRASK.sub.-- MSVKI POLYHEDRIN SPODOPTERA LITTORALIS NUCLEAR 17-51 POLYHEDROSIS VIRUS PREV.sub.-- BIV27 TRANSFORMING PROTEIN 21 KIRSTEN MURINE SARCOMA VIRUS 142-176 PREV.sub.-- EIAV9 REV PROTEIN BOVINE IMMUNODEFICIENCY VIRUS 77-115 (ISOLATE 127) PREV.sub.-- EIAVC REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 51-89 (CLONE 1369) PREV.sub.-- EIAVY REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 51-89 (CLONE CL22) PREV.sub.-- HV112 REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 81-119 (ISOLATE WYOMING) PREV.sub.-- HV1A2 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (CLONE 12) PREV.sub.-- HV1B1 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 32-69 (ARV2/SF2 ISOLATE PREV.sub.-- HV1B8 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (BH10 ISOLATE) PREV.sub.-- HV1BN REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 25-59 (BH8 ISOLATE) PREV.sub.-- HV1BR REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-59 (BRAIN ISOLATE) PREV.sub.-- HV1EL REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (BRU ISOLATE) PREV.sub.-- HV1H2 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 32-66 (ELI ISOLATE) PREV.sub.-- HV1J3 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (HXB2 ISOLATE) PREV.sub.-- HV1JR REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 29-63 (JH3 ISOLATE) PREV.sub.-- HV1MA REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 31-66 (JRCSF ISOLATE) PREV.sub.-- HV1MN REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 31-66 (MAL ISOLATE) PREV.sub.-- HV1OY REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 31-66 (MN ISOLATE) PREV.sub.-- HV1PV REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 32-69 (OYI ISOLATE) PREV.sub.-- HV1S3 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (PV22 ISOLATE) AN PREV.sub.-- HV1SC REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (SF33 ISOLATE) PREV.sub.-- SIVA1 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 32-69 (SC ISOLATE) PREV.sub.-- SIVAG REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 26-77 (AGM155 ISOLATE) PREV.sub.-- SIVAI REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 26-77 (AGM3 ISOLATE) PREV.sub.-- SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 29-77 (ISOLATE AGM/CLONE GR1 PREV.sub.-- SIVCZ REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 28-75 (TYO-1 ISOLATE) PREV.sub.-- VILV REV PROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 33-67 PRIR1.sub.-- ASFM2 REV PROTEIN VISNA LENTIVIRUS (STRAIN 1514) 21-62 PRIR1.sub.-- EBV RIBONUCLEOSIDE-DIPHOSPHATE AFRICAN SWINE FEVER VIRUS 7-41 88-133 635-683 REDUCTASE LAR (ISOLATE MALAWI LIL 20/1) PRIR1.sub.-- HCMVA RIBONUCLEOSIDE-DIPHOSPHATE EPSTEIN-BARR VIRUS (STRAIN B95-8) 213-247 689-723 REDUCTASE LAR PRIR1.sub.-- HSVEB RIBONUCLEOSIDE-DIPHOSPHATE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 632-668 REDUCTASE LAR PRIR1.sub.-- HSVSA RIBONUCLEOSIDE-DIPHOSPHATE EQUINE HERPESVIRUS TYPE 1 76-110 REDUCTASE LAR (STRAIN AB4P) PRIR1.sub.-- VACCC RIBONUCLEOSIDE-DIPHOSPHATE HERPESVIRUS SAIMIRI (STRAIN 11) 324-365 REDUCTASE LAR PRIR1.sub.-- VACCV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN COPENHAGEN) 367-402 REDUCTASE LAR PRIR1.sub.-- VARV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN WR) 367-402 REDUCTASE LAR PRIR1.sub.-- VZVD RIBONUCLEOSIDE-DIPHOSPHATE VARIOLA VIRUS 367-402 REDUCTASE LAR PRIR2.sub.-- EBV RIBONUCLEOSIDE-DIPHOSPHATE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 223-257 REDUCTASE LAR PRIR2.sub.-- HSVB3 RIBONUCLEOSIDE-DIPHOSPHATE EPSTEIN-BARR VIRUS (STRAIN B95-8) 89-137 REDUCTASE SMA PRIR2.sub.-- HSVEB RIBONUCLEOSIDE-DIPHOSPHATE BOVINE HERPESVIRUS TYPE 1 (STRAIN 34) 101-135 REDUCTASE SMA PRIR2.sub.-- HSVSA RIBONUCLEOSIDE-DIPHOSPHATE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 106-140 REDUCTASE SMA PRIR2.sub.-- SFVKA RIBONUCLEOSIDE-DIPHOSPHATE HERPESVIRUS SAIMIRI (STRAIN 11) 125-159 REDUCTASE SMA PRIR2.sub.-- VACCC RIBONUCLEOSIDE-DIPHOSPHATE SHOPE FIBROMA VIRUS (STRAIN KASZA) 98-132 REDUCTASE SMA PRIR2.sub.-- VACCP RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN COPENHAGEN) 98-132 REDUCTASE SMA PRIR2.sub.-- VACCV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN L-1VP) 98-132 REDUCTASE SMA PRIR2.sub.-- VARV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN WR) 98-132 REDUCTASE SMA PRL1.sub.-- HSV2H RIBONUCLEOSIDE-DIPHOSPHATE VARIOLA VIRUS 98-132 REDUCTASE SMA PRP94.sub.-- VACCV NEUROVIRULENCE FACTOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 171-212 PRP94.sub.-- VARV RNA-POLYMERASE-ASSOCIATED VACCINIA VIRUS (STRAIN WR), AND 116-150 465-540 757-791 TRANSCRIPTION S (STRAIN COPENHAGEN PRPO1.sub.-- VACCC RNA-POLYMERASE-ASSOCIATED VARIOLA VIRUS 41-75 116-150 465-540 757-791 TRANSCRIPTION S PRPO1.sub.-- VACCV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN) 243-291 622-656 754-791 954-988 1006- 147 KD POLYPE 1057 PRPO1.sub.-- VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR) 243-291 622-656 754-791 954-988 1024- 147 KD POLYPE 1058 PRPO2.sub.-- CAPVK DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 243-291 622-656 754-791 954-988 1006- 147 KD POLYPE 1057 PRPO2.sub.-- COWPX DNA-DIRECTED RNA POLYMERASE CAPRIPOXVIRUS (STRAIN KS-1) 19-60 114-155 589-630 132 KD POLYPE PRPO2.sub.-- VACCV DNA-DIRECTED RNA POLYMERASE COWPOX VIRUS 211-245 359-400 833-874 132 KD POLYPE PRPO2.sub.-- VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR), 211-245 359-400 833-874 132 KD POLYPE AND (STRAIN COPENHAGEN) PRPO4.sub.-- VACCC DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 211-245 359-400 833-874 132 KD POLYPE PRPO4.sub.-- VACCV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN) 62-116 35 KD POLYPEP PRPO4.sub.-- VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR) 62-116 35 KD POLYPEP PRPO5.sub.-- VACCC DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 62-116 35 KD POLYPEP PRPO5.sub.-- VACCV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN) 1-71 30 KD POLYPEP PRPO5.sub.-- VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR) 1-71 30 KD POLYPEP PRPO6.sub.-- VACCV DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 1-71 30 KD POLYPEP PRPO6.sub.-- VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR), 25-59 22 KD POLYPEP AND (STRAIN COPENHAGEN) PRPO7.sub.-- VACCV DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 25-59 22 KD POLYPEP PRPO7.sub.-- VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR), 43-93 19 KD POLYPEP AND (STRAIN COPENHAGEN) PRPOA.sub.-- LELV DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 43-93 19 KD POLYPEP PRPOL.sub.-- EAV RNA-DIRECTED RNA POLYMERASE LELYSTAD VIRUS 1533- 1721- 1958- 2109- 1567 1758 1992 2157 PRRP1.sub.-- IAANN RNA-DIRECTED RNA POLYMERASE EQUINE ARTERITIS VIRUS 1083- 1477- 1633- 1117 1518 1673 PRRP1.sub.-- IABEI RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/ANN ARBOR/6/60) PRRP1.sub.-- IADUN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 350-391 SUBUNIT P1 (STRAIN A/BEIJING/11/56) PRRP1.sub.-- IAGU2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/DUNEDIN/4/73) PRRP1.sub.-- IAHLO RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/GULL/MARYLAND/704/77) PRRP1.sub.-- IAHTE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/EQUINE/LONDON/1416/73) PRRP1.sub.-- IAKIE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/EQUINE/TENNESSEE/5/86) PRRP1.sub.-- IAKOR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/KIEV/59/79) PRRP1.sub.-- IALE1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/KOREA/426/68) PRRP1.sub.-- IALE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/LENINGRAD/134/57) PRRP1.sub.-- IALE3 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/LENINGRAD/134/17/57) PRRP1.sub.-- IAMAN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/LENINGRAD/134/47/57) PRRP1.sub.-- IAME8 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP1.sub.-- IANT6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/MEMPHIS/8/88) PRRP1.sub.-- IAPUE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/NT/60/68) PRRP1.sub.-- IASIN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/PUERTO RICO/8/34) PRRP1.sub.-- IATKM RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/SINGAPORE/1/57) PRRP1.sub.-- IAVI7 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/TURKEY/MINNESOTA/833/80 PRRP1.sub.-- IAWIL RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/VICTORIA/3/75) PRRP1.sub.-- IAWIS RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/WILSON-SMITH/33) PRRP1.sub.-- IAZH3 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/WISCONSIN/3523/88) PRRP1.sub.-- IAZON RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 187-242 279-313 SUBUNIT P1 (STRAIN A/SWINE/HONG KONG/126/82) PRRP1.sub.-- IAZTF RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/SWINE/ONTARIO/2/81) PRRP1.sub.-- INBAC RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/SWINE/TENNESSEE/26/77) PRRP1.sub.-- INBAD RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 208-249 SUBUNIT P1 (STRAIN B/ANN ARBOR/1/66) PRRP1.sub.-- INBLE RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 208-249 SUBUNIT P1 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE] PRRP1.sub.-- INCJJ RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 208-249 SUBUNIT P1 (STRAIN B/LEE/40) PRRP2.sub.-- IAANN RNA-DIRECTED RNA POLYMERASE INFLUENZA C VIRUS 305-384 648-686 707-752 SUBUNIT P1 (STRAIN C/JJ/50) PRRP2.sub.-- IADH2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/ANN ARBOR/6/60) PRRP2.sub.-- IAFPR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/DUCK/HOKKAIDO/8/80) PRRP2.sub.-- IAGU2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PRRP2.sub.-- IAHLO RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/GULL/MARYLAND/704/77) PRRP2.sub.-- IAHTE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/EQUINE/LONDON/1416/73) PRRP2.sub.-- IAKOR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/EQUINE/TENNESSEE/5/86) PRRP2.sub.-- IALE1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/KOREA/426/68) PRRP2.sub.-- IALE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/LENINGRAD/134/57) PRRP2.sub.-- IAMAN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/LENINGRAD/134/17/57) PRRP2.sub.-- IANT6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP2.sub.-- IAPI0 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/NT/60/68) PRRP2.sub.-- IAPUE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/PINTAIL/ALBERTA/119/79) PRRP2.sub.-- IARUD RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/PUERTO RICO/8/34) PRRP2.sub.-- IASIN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/RUDDY TURNSTONE/NEW JERS PRRP2.sub.-- IATKM RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SINGAPORE/1/57) PRRP2.sub.-- IAVI7 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/TURKEY/MINNESOTA/833/80) PRRP2.sub.-- IAWIL RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/VICTORIA/3/75) PRRP2.sub.-- IAZH2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/WILSON-SMITH/33) PRRP2.sub.-- IAZH3 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/HONG KONG/81/78 PRRP2.sub.-- IAZI1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/HONG KONG/126/82 PRRP2.sub.-- IAZTF RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/IOWA/15/30 PRRP2.sub.-- INBAC RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/TENNESSEE/26/77) PRRP2.sub.-- INBAD RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 111-196 349-390 SUBUNIT P2 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PRRP2.sub.-- INBSI RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 111-196 349-390 SUBUNIT P2 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PRRP3.sub.-- IAANN RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 111-196 349-383 SUBUNIT P2 (STRAIN B/SINGAPORE/222/79) PRRP3.sub.-- IABUD RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/ANN ARBOR/6/60) PRRP3.sub.-- IACHI RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 518-567 707-755 SUBUNIT P3 (STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PRRP3.sub.-- IAFPR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/CHILE/1/83) PRRP3.sub.-- IAFPW RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PRRP3.sub.-- IAGU2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/FOWL PLAGUE VIRUS/WEYBRID PRRP3.sub.-- IAGUA RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/GULL/MARYLAND/704/77 PRRP3.sub.-- IAHK6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 7-41 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/GULL/ASTRAKHAN/227/84 PRRP3.sub.-- IAHLO RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/EQUINE/KENTUCKY/2/860) PRRP3.sub.-- IAHPR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/EQUINE/LONDON/1416/73) PRRP3.sub.-- IAKIE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 721-755 SUBUNIT P3 (STRAIN A/EQUINE/PRAGUE/1/56) PRRP3.sub.-- IAKOR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/KIEV/59/79) PRRP3.sub.-- IALEI RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/KOREA/426/68) PRRP3.sub.-- IALE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/LENINGRAD/134/57) PRRP3.sub.-- IALE3 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/LENINGRAD/134/17/57) PRRP3.sub.-- IAMAN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/LENINGRAD/134/47/57) PRRP3.sub.-- IAME8 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP3.sub.-- IANT6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 7-41 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/MEMPHIS/8/88) PRRP3.sub.-- IAPUE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/NT/60/68) PRRP3.sub.-- IARUD RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/PUERTO RICO/8/34) PRRP3.sub.-- IASE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/RUDDY TURNSTONE/NEW JERSE PRRP3.sub.-- IASIN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/SEAL/MASSACHUSETTS/133/82) PRRP3.sub.-- IATKM RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/SINGAPORE/1/57) PRRP3.sub.-- IAVI7 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/TURKEY/MINNESOTA/833/80) PRRP3.sub.-- IAWIL RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/VICTORIA/3/75) PRRP3.sub.-- IAZI1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/WILSON-SMITH/33 PRRP3.sub.-- IAZTE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/SWINE/IOWA/15/30) PRRP3.sub.-- INBAC RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 7-41 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/SWINE/TENNESSEE/24/77 PRRP3.sub.-- INBAD RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 458-533 SUBUNIT P3 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PRRP3.sub.-- INCBE RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 458-533 SUBUNIT P3 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PRRP3.sub.-- INCJJ RNA-DIRECTED RNA POLYMERASE INFLUENZA C VIRUS 235-269 275-309 SUBUNIT P3 (STRAIN C/BERLIN/1/85) PRRP3.sub.-- THOGV RNA-DIRECTED RNA POLYMERASE INFLUENZA C VIRUS 235-269 275-316 SUBUNIT P3 (STRAIN C/JJ/50) PRRPA.sub.-- CVH22 RNA-DIRECTED RNA POLYMERASE THOGOTO VIRUS 343-401 SUBUNIT P3 PRRPA.sub.-- CVMJH RNA-DIRECTED RNA POLYMERASE HUMAN CORONAVIRUS (STRAIN 229E) 358-392 495-571 1742- 1971- 3664- 3912- 1776 2008 3724 3946 PRRPB.sub.-- BEV RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUS MHV (STRAIN JHM) 617-651 1364- 2769- 3586- 3821- 4075- 4319- 1398 2803 3620 3855 4121 4353 PRRPB.sub.-- CVMA5 RNA-DIRECTED RNA POLYMERASE BERNE VIRUS 20-64 617-651 943- 1009 PRRPB.sub.-- CVMJH RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUS MHV (STRAIN A59) 1129- 1303- 1453- 1692- 2629- 1170 1337 1494 1726 2670 PRRPB.sub.-- IBVB RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUS MHV (STRAIN JHM) 1129- 1303- 1453- 1690- 2627- 1170 1337 1494 1724 2668 PRRPB.sub.-- IBVK RNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BRONCHITIS VIRUS 499-550 650-695 1460- 1509- 2246- (STRAIN BEAUDETTE) 1494 1548 2287 PRRPL.sub.-- BTV10 RNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BRONCHITIS VIRUS 115-156 (STRAIN KB8523) PRRPL.sub.-- BUNYW RNA-DIRECTED RNA POLYMERASE BLUETONGUE VIRUS 308-342 705-748 825-903 1021- 1114- (SEROTYPE 10/ISOLATE USA) 1076 1201 PRRPL.sub.-- CDVO RNA POLYMERASE BUNYAMWERA VIRUS 2-36 80-114 308-363 371-412 1704- 1802- 1889- 1741 1861 1935 PRRPL.sub.-- HANTV RNA POLYMERASE BETA SUBUNIT CANINE DISTEMPER VIRUS 20-54 (STRAIN ONDERSTEPOORT) PRRPL.sub.-- HRSVA RNA POLYMERASE HANTAAN VIRUS (STRAIN 76-118) 98-139 174-208 372-431 557-591 655-696 731-783 905-949 1276- 1310 1419- 1742- 1993- 1453 1776 2027 PRRPL.sub.-- MABVM RNA POLYMERASE BETA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS 87-188 827-861 1131- 1185- 1465- (STRAIN A2 1179 1220 1517 PRRPL.sub.-- MABVP RNA-DIRECTED RNA POLYMERASE MARBURG VIRUS (STRAIN MUSOKE) 597-631 1046- 1490- 1804- 2029- 2194- 1092 1552 1838 2063 2266 PRRPL.sub.-- MEASE RNA-DIRECTED RNA POLYMERASE MARBURG VIRUS (STRAIN POPP) 597-631 1046- 1490- 1092 1552 PRRPL.sub.-- MUMPM RNA POLYMERASE BETA SUBUNIT MEASLES VIRUS (STRAIN EDMONSTON) 197-231 790-824 869-903 1064- 1283- 2121- 1109 1317 2155 PRRPL.sub.-- NDVB RNA POLYMERASE BETA SUBUNIT MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 164-214 220-254 267-304 576-627 752-807 1231- 1447- 1487- 1286 1481 1531 1566- 2191- 1600 2225 PRRPL.sub.-- PI2HT RNA POLYMERASE BETA SUBUNIT NEWCASTLE DISEASE VIRUS 167-208 230-295 1969- 2043- 2108- (STRAIN BEAUDETTE C/45) 2013 2077 2142 PRRPL.sub.-- PI3H4 RNA POLYMERASE BETA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS 136-170 575-628 750-785 1226- 1316- 1417- 1564- 1687- (STRAIN TOSHIBA) 1284 1357 1479 1630 1721 1901- 1955 PRRPL.sub.-- PUUMH RNA POLYMERASE BETA SUBUNIT HUMAN PARAINFLUENZA 3 VIRUS 48-91 107-163 540-574 747-781 1064- 1293- 1499- 1994- (STRAIN NIH 47885) 1129 1356 1536 2036 PRRPL.sub.-- RABVP RNA-DIRECTED RNA POLYMERASE PUUMALA VIRUS (STRAIN HALLNAS B1) 98-132 381-415 444-488 557-591 655-696 731-783 922-976 1119- 1153 1742- 1940- 1993- 1776 1975 2032 PRRPL.sub.-- RABVS RNA POLYMERASE BETA SUBUNIT RABIES VIRUS (STRAIN PV) 73-114 197-231 696-730 1174- 1522- 1584- 2068- 1222 1580 1618 2123 PRRPL.sub.-- RDV RNA POLYMERASE BETA SUBUNIT RABIES VIRUS (STRAIN SAD B19) 73-114 197-231 696-730 749-783 1174- 1522- 1584- 1222 1580 2123 PRRPL.sub.-- RVFVZ RNA-DIRECTED RNA POLYMERASE RICE DWARF VIRUS 17-61 534-575 844-878 918-985 1037- 1071 PRRPL.sub.-- SEND5 RNA-DIRECTED RNA POLYMERASE RIFT VALLEY FEVER VIRUS (STRAIN ZH-548 M12) 398-439 641-678 832-887 1081- 1653- 1819- 1115 1687 1870 PRRPL.sub.-- SENDE RNA POLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 309-343 540-600 612-656 747-781 1064- 1239- 1499- 2000- 1119 1280 1536 2034 2146- 2216 PRRPL.sub.-- SENDZ RNA POLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAIN ENDERS) 129-163 360-420 432-476 567-601 884-939 1059- 1319- 1820- 1100 1356 1854 1966- 2036 PRRPL.sub.-- SEOU8 RNA POLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAIN Z) 309-343 540-600 612-656 747-781 1064- 1239- 1499- 2000- 1119 1280 1536 2034 2146- 2216 PRRPL.sub.-- SV5WR RNA-DIRECTED RNA POLYMERASE SEOUL VIRUS (STRAIN 80-39) 98-139 174-208 557-591 655-696 731-765 1742- 1947- 1993- 1776 1981 2027 PRRPL.sub.-- SYNV RNA POLYMERASE BETA SUBUNIT SIMIAN VIRUS 5 (STRAIN 21004-WR) 547-627 747-781 1225- 1319- 1592- 1676- 2024- 1280 1353 1626 1715 2058 PRRPL.sub.-- TSWVB RNA POLYMERASE BETA SUBUNIT SONCHUS YELLOW NET VIRUS 760-794 825-859 977- 1089- 1978- 2059- 1014 1137 2032 2107 PRRPL.sub.-- UUK RNA-DIRECTED RNA POLYMERASE TOMATO SPOTTED WILT VIRUS 46-101 399-433 539-573 589-634 1119- 1195- 1321- 1538- (BRAZILIAN ISOLATE CPNH1/BR 1153 1236 1379 1572 1684- 1857- 2073- 2156- 2206- 2315- 2378- 2809- 1725 1898 2127 2200 2247 2368 2419 2843 PRRPL.sub.-- VSVJH RNA POLYMERASE UUKUNIEMI VIRUS 127-183 282-323 836-874 1030- 1481- 2015- 2061- 1071 1515 2049 2098 PRRPL.sub.-- VSVJO RNA POLYMERASE BETA SUBUNIT VESICULAR STOMATITIS VIRUS 319-358 674-715 720-763 1522- 1802- (SEROTYPE NEW JERSEY/STRA 1567 1836 PRRPL.sub.-- VSVSJ RNA POLYMERASE BETA SUBUNIT VESICULAR STOMATITIS VIRUS 319-358 674-715 720-763 1802- (SEROTYPE NEW JERSEY/STRA 1836 PRRPO.sub.-- ACLSV RNA POLYMERASE BETA SUBUNIT VESICULAR STOMATITIS VIRUS 674-715 720-763 1019- 1742- 2066- (STRAIN SAN JUAN) 1074 1799 2107 PRRPO.sub.-- BWYVF RNA-DIRECTED RNA POLYMERASE APPLE CHLOROTIC LEAF SPOT VIRUS 228-262 557-596 916-950 1235- 1269 PRRPO.sub.-- BYDV1 PUTATIVE RNA-DIRECTED RNA BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 304-341 POLYMERASE PRRPO.sub.-- BYDVP PUTATIVE RNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS 234-285 POLYMERASE (ISOLATE MAV-PS1) PRRPO.sub.-- BYDVR PUTATIVE RNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS 234-285 POLYMERASE (ISOLATE PAV) PRRPO.sub.-- CARMV PUTATIVE RNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS 234-285 POLYMERASE (ISOLATE P-PAV) PRRPO.sub.-- CGMVS PROBABLE RNA-DIRECTED RNA CARNATION MOTTLE VIRUS 93-131 POLYMERASE PRRPO.sub.-- IBDVS PUTATIVE RNA-DIRECTED RNA CUCUMBER GREEN MOTTLE MOSAIC VIRUS 7-41 387-428 446-480 726-767 1445- POLYMERASE (WATERMELON STR 1479 PRRPO.sub.-- IBDVA PUTATIVE RNA-DIRECTED RNA AVIAN INFECTIOUS BURSAL DISEASE 384-432 446-484 POLYMERASE VIRUS (STRAIN 52/70) PRRPO.sub.-- IPNVJ PUTATIVE RNA-DIRECTED RNA AVIAN INFECTIOUS BURSAL DISEASE 144-185 266-307 709-757 771-809 POLYMERASE VIRUS (STRAIN AUSTRALI PRRPO.sub.-- IPNVS PUTATIVE RNA-DIRECTED RNA INFECTIOUS PANCREATIC NECROSIS VIRUS 147-181 268-407 501-535 750-802 POLYMERASE (SEROTYPE JASPER) PRRPO.sub.-- LYCVA PUTATIVE RNA-DIRECTED RNA INFECTIOUS PANCREATIC NECROSIS VIRUS 147-181 366-407 501-535 753-802 POLYMERASE (SEROTYPE SP) PRRPO.sub.-- LYCVW RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 301-346 805-886 926-960 1509- 2090- (STRAIN ARMSTRON 1543 2124 PRRPO.sub.-- MCMV RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 301-345 (STRAIN WE) PRRPO.sub.-- PEAMV PROBABLE RNA-DIRECTED RNA MAIZE CHLOROTIC MOTTLE VIRUS 181-215 697-731 POLYMERASE PRRPO.sub.-- PLRV1 RNA-DIRECTED RNA POLYMERASE PEA ENATION MOSAIC VIRUS 321-358 PRRPO.sub.-- PLRVW PUTATIVE RNA-DIRECTED RNA POTATO LEAFROLL VIRUS (STRAIN 1) 336-373 423-457 POLYMERASE PRRPO.sub.-- PPMVS PUTATIVE RNA-DIRECTED RNA POTATO LEAFROLL VIRUS 336-373 423-457 POLYMERASE (STRAIN WAGENINGEN) PRRPO.sub.-- RCNMV PUTATIVE RNA-DIRECTED RNA PEPPER MILD MOTTLE VIRUS 321-362 402-454 627-661 862-896 POLYMERASE (STRAIN SPAIN PRRPO.sub.-- REOVD PUTATIVE RNA-DIRECTED RNA REC CLOVER NECROTIC MOSAIC VIRUS 666-700 POLYMERASE PRRPO.sub.-- REOVJ RNA-DIRECTED RNA POLYMERASE REOVIRUS (TYPE 3/STRAIN DEARING) 310-361 PRRPO.sub.-- REOVL RNA-DIRECTED RNA POLYMERASE REOVIRUS (TYPE 2/STRAIN D5/JONES) 310-344 PRRPO.sub.-- ROTBR RNA-DIRECTED RNA POLYMERASE REOVIRUS (TYPE 1/STRAIN LANG) 310-361 PRRPO.sub.-- ROTBU RNA-DIRECTED RNA POLYMERASE BOVINE ROTAVIRUS (STRAIN RF) 60-96 133-167 204-245 535-569 579-631 639-686 690-724 771-805 SUBUNIT VP1 PRRPO.sub.-- ROTPC RNA-DIRECTED RNA POLYMERASE BOVINE ROTAVIRUS (STRAIN UK) 60-96 133-167 204-245 535-569 579-631 639-686 690-724 771-805 SUBUNIT VP1 PRRPO.sub.-- ROTPG RNA-DIRECTED RNA POLYMERASE PORCINE ROTAVIRUS 3-44 255-299 335-397 476-510 518-620 966- SUBUNIT VP1 (GROUP C/STRAIN COWDEN) 1007 PRRPO.sub.-- ROTS1 RNA-DIRECTED RNA POLYMERASE PORCINE ROTAVIRUS (STRAIN GOTTFRIED) 62-96 133-167 336-377 581-631 636-686 690-724 771-842 SUBUNIT VP1 PRRPO.sub.-- SBMV RNA-DIRECTED RNA POLYMERASE SIMIAN 11 ROTAVIRUS (STRAIN SA11) 60-96 133-167 535-569 579-631 639-686 690-724 771-805 SUBUNIT VP1 PRRPO.sub.-- SCVLA PROBABLE RNA-DIRECTED RNA SOUTHERN BEAN MOSAIC VIRUS 628-665 POLYMERASE PRRPO.sub.-- TACV RNA-DIRECTED RNA POLYMERASE SACCHAROMYCES CEREVISIAE VIRUS L-A 100-134 147-191 PRRPO.sub.-- TMGMV RNA POLYMERASE TACARIBE VIRUS 155-204 220-278 375-416 484-518 891-925 1030- 1285- 1981- 1081 1319 2015 PRRPO.sub.-- TMV PUTATIVE RNA-DIRECTED RNA TOBACCO MILD GREEN MOSAIC VIRUS 401-449 682-720 765-818 POLYMERASE (TMV STRAIN U2) PRRPO.sub.-- TMVKR PUTATIVE RNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (VULGARE) 3-37 401-453 665-699 POLYMERASE PRRPO.sub.-- TMVTO PUTATIVE RNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (STRAIN KOREAN) 3-37 401-453 665-699 POLYMERASE PRRPO.sub.-- TNVD PUTATIVE RNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (STRAIN TOMATO/L) 3-37 401-453 860-894 POLYMERASE PRRPP.sub.-- BRSVA RNA-DIRECTED RNA POLYMERASE TOBACCO NECROSIS VIRUS (STRAIN D) 102-144 PRRPP.sub.-- CDVO RNA POLYMERASE ALPHA SUBUNIT BOVINE RESPIRATORY SYNCYTIAL VIRUS 99-158 160-216 (STRAIN A51908) PRRPP.sub.-- HRSV RNA POLYMERASE ALPHA SUBUNIT CANINE DISTEMPER VIRUS 312-373 (STRAIN ONDERSTEPOORT) PRRPP.sub.-- HRSV1 RNA POLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-158 160-216 PRRPP.sub.-- HRSVA RNA POLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-158 160-216 (SUBGROUP B/STRAI PRRPP.sub.-- HRSVL RNA POLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-158 160-216 (STRAIN A2) PRRPP.sub.-- MEASE RNA POLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-158 160-216 (SUBGROUP A/STRAI PRRPP.sub.-- MEASI RNA POLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAIN EDMONSTON) 315-374 460-495 PRRPP.sub.-- MEASY RNA POLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAIN IP-3-CA) 315-374 460-495 PRRPP.sub.-- MUMP1 RNA POLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAIN YAMAGATA-1) 315-374 460-495 PRRPP.sub.-- MUMPE RNA POLYMERASE ALPHA SUBUNIT MUMPS VIRUS (STRAIN SBL-1) 149-183 213-275 PRRPP.sub.-- MUMPM RNA POLYMERASE ALPHA SUBUNIT MUMPS VIRUS (STRAIN ENDERS) 214-276 PRRPP.sub.-- NDVA RNA POLYMERASE ALPHA SUBUNIT MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 214-276 PRRPP.sub.-- NDVB RNA POLYMERASE ALPHA SUBUNIT NEWCASTLE DISEASE VIRUS 100-134 (STRAIN AUSTRALIA-VICTORIA/32) PRRPP.sub.-- PI1HB RNA POLYMERASE ALPHA SUBUNIT NEWCASTLE DISEASE VIRUS 100-138 (STRAIN BEAUDETTE C/45) PRRPP.sub.-- PI1HC RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS 80-114 313-364 375-437 (STRAIN C35) PRRPP.sub.-- PI1HD RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS 80-114 313-364 375-437 (STRAIN C39) PRRPP.sub.-- PI1HE RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS 80-114 313-364 375-437 (STRAIN CI-5/73) PRRPP.sub.-- PI2H RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS 66-114 237-271 313-364 375-437 (STRAIN CI-14/830) PRRPP.sub.-- PI2HT RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS 218-281 PRRPP.sub.-- PI3B RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS 218-281 (STRAIN TOSHIBA) PRRPP.sub.-- PI3H4 RNA POLYMERASE ALPHA SUBUNIT BOVINE PARAINFLUENZA 3 VIRUS 31-130 414-470 PRRPP.sub.-- PI4HA RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 3 VIRUS 410-499 (STRAIN NIH 47885) PRRPP.sub.-- PI4HB RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 4A VIRUS 4-38 222-285 (STRAIN TOSHIBA) PRRPP.sub.-- PIRYV RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 4B VIRUS 222-285 (STRAIN 68-333) PRRPP.sub.-- RABVA RNA POLYMERASE ALPHA SUBUNIT PIRY VIRUS 137-174 PRRPP.sub.-- RABVC RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN AVO1) 93-127 PRRPP.sub.-- RABVE RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN CVS-11) 93-127 PRRPP.sub.-- RABVP RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN ERA), AND (STRAIN PM) 93-127 PRRPP.sub.-- RABVS RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN PV) 93-127 PRRPP.sub.-- SEND5 RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN SAD B19 93-127 PRRPP.sub.-- SEND6 RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 313-364 375-447 PRRPP.sub.-- SENDF RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN 6/94) 323-364 375-447 PRRPP.sub.-- SENDH RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN FUSHIMI) 313-364 375-447 PRRPP.sub.-- SENDZ RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN HARRIS) 313-364 375-447 PRRPP.sub.-- SV5 RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN Z) 313-364 375-447 PRRPP.sub.-- SYNV RNA POLYMERASE ALPHA SUBUNIT SIMIAN VIRUS 5 (STRAIN W3) 205-278 PRRPP.sub.-- VSVIG RNA POLYMERASE ALPHA SUBUNIT SONCHUS YELLOW NET VIRUS 138-173 233-281 PRRPP.sub.-- VSVIM RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS 3-43 (SEROTYPE INDIANA/STRAIN G PRRPP.sub.-- VSVJM RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS 3-43 (SEROTYPE INDIANA/STRAIN M PRRPP.sub.-- VSVJO RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS 3-37 (SEROTYPE NEW JERSEY/STRA PRRPP.sub.-- VSVSJ RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS 3-37 (SEROTYPE NEW JERSEY/STRA PSPHR.sub.-- AMEPV RNA POLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS 3-43 (STRAIN SAN JUAN) PSP12.sub.-- VACCV SPHEROIDIN AMSACTA MOOREI ENTOMOPOXVIRUS 223-264 361-395 PSP12.sub.-- VARV SERINE PROTEINASE INHIBITOR VACCINIA VIRUS (STRAIN WR) 21-86 PSP13.sub.-- VACCC SERINE PROTEINASE INHIBITOR 2 VARIOLA VIRUS 21-86 PSP13.sub.-- VACCV SERINE PROTEINASE INHIBITOR 3 VACCINIA VIRUS (STRAIN COPENHAGEN) 118-167 225-266 PSP13.sub.-- VARV SERINE PROTEINASE INHIBITOR 3 VACCINIA VIRUS (STRAIN WR) 118-167 225-266 PSPIA.sub.-- VACCC SERINE PROTEINASE INHIBITOR 3 VARIOLA VIRUS 122-171 229-270 PT2C2.sub.-- CHVP1 SERINE PROTEINASE INHIBITOR 2 VACCINIA VIRUS (STRAIN COPENHAGEN) 11-65 HOMOLOG FIRST PTAA2.sub.-- VACCV TYPE II RESTRICTION ENZYME CVIAII PARAMECIUM BURSARIA CHLORELLA VIRUS 1 48-85 PTAG8.sub.-- FOWPV TRANS-ACTIVATOR PROTEIN A2 VACCINIA VIRUS (STRAIN WR, COPENHAGEN, 95-133 173-207 AND VARIOLA VI PTAG8.sub.-- VACCV TRANS-ACTIVATOR PROTEIN FP0 FOWLPOX VIRUS 3-51 PTAG8.sub.-- VARV TRANS-ACTIVATOR PROTEIN GK1 VACCINIA VIRUS (STRAIN WR), 3-51 (STRAIN COPENHAGEN) PTALA.sub.-- BFDV TRANS-ACTIVATOR PROTEIN GK1 VARIOLA VIRUS 3-51 PTALA.sub.-- POVBO LARGE T ANTIGEN BUDGERIGAR FLEDGLING DISEASE VIRUS 291-325 464-498 PTALA.sub.-- POVHA LARGE T ANTIGEN BOVINE POLYOMAVIRUS 303-337 495-537 PTALA.sub.-- POVJC LARGE T ANTIGEN HAMSTER POLYOMAVIRUS 464-501 587-621 PTALA.sub.-- POVLY LARGE T ANTIGEN POLYOMAVIRUS JC 153-187 589-623 PTALA.sub.-- POVM3 LARGE T ANTIGEN LYMPHOTROPIC POLYOMAVIRUS 3-41 206-258 437-478 PTALA.sub.-- POVMA LARGE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN 3) 509-544 PTALA.sub.-- POVMC LARGE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN A2) 507-542 PTAMI.sub.-- POVHA LARGE T ANTIGEN MOUSE POLYOMAVIRUS 504-539 (STRAIN CRAWFORD SMALL-PLAQUE) PTAMI.sub.-- POVM3 MIDDLE T ANTIGEN HAMSTER POLYOMAVIRUS 339-378 PTAMI.sub.-- POVMA MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN 3) 211-245 388-422 PTAMI.sub.-- POVMC MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN A2) 192-226 369-403 PTASM.sub.-- POVBO MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS 192-226 369-403 (STRAIN CRAWFORD SMALL-PLAQUE) PTASM.sub.-- POVLY SMALL T ANTIGEN BOVINE POLYOMAVIRUS 41-85 PTATR.sub.-- NPVAC SMALL T ANTIGEN LYMPHOTROPIC POLYOMAVIRUS 3-41 PTATR.sub.-- NPVBM TRANS-ACTIVATING TRANSCRIPTIONAL AUTOGRAPHA CALIFORNICA NUCLEAR 408-442 46-480 489-523 REGULAT POLYHEDROSIS VIRUS PTATR.sub.-- NPVOP TRANS-ACTIVATING TRANSCRIPTIONAL BOMBYX MORI NUCLEAR POLYHEDROSIS 413-447 451-485 494-528 REGULAT VIRUS PTAT.sub.-- SIVA1 TRANS-ACTIVATING TRANSCRIPTIONAL ORGYIA PSEUDOTSUGATA MULTICAPSID 391-455 511-554 REGULAT POLYHEDROSIS VIRUS PTAT.sub.-- SIVAI TAT PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 73-109 (AGM155 ISOLATE) PTAT.sub.-- VILV TAT PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 137-185 (ISOLATE AGM/CLONE GR1 PTAT.sub.-- VILV1 TRANS-ACTIVATING TRANSCRIPTIONAL VISNA LENTIVIRUS (STRAIN 1514) 28-74 REGULAT PTAT.sub.-- VILV2 TRANS-ACTIVATING TRANSCRIPTIONAL VISNA LENTIVIRUS 40-74 REGULAT (STRAIN 1514/CLONE LV1-1KS1) PTCB.sub.-- FLV TRANS-ACTIVATING TRANSCRIPTIONAL VISNA LENTIVIRUS 40-74 REGULAT (STRAIN 1514/CLONE LV1-1KS2) PTEGP.sub.-- HSV11 T-CELL RECEPTOR BETA CHAIN PRECURSOR FELINE LEUKEMIA VIRUS 279-321 PTEGP.sub.-- HSVEA TEGUMENT PHOSPHOPROTEIN US9 HERPES SIMPLEX VIRUS 27-61 (TYPE 1/STRAIN 17) PTEGP.sub.-- HSVEB NONSENSE PTEGP.sub.-- HSVEK NONSENSE PTEGP.sub.-- HSVSB NONSENSE PTEGU.sub.-- EBV NONSENSE PTEGU.sub.-- HCMVA LARGE TEGUMENT PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 768-802 821-855 938-972 1101- 1208- 1479- 1700- 1809- 1138 1242 1516 1753 1867 1870- 1920- 3108- 1916 1954 3149 PTEGU.sub.-- HSV11 PROBABLE LARGE TEGUMENT PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 34-71 215-249 543-581 700-738 868-909 936-977 1004- 1163- 1038 1200 1237- 2200- 1296 2235 PTEGU.sub.-- HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 731-765 801-842 1022- 1223- 1275- 1315- 1520- 1609- (TYPE 1/STRAIN 17) 1059 1269 1309 1370 1531 1669 1673- 1749- 1820- 2670- 1714 1783 1854 2704 PTEGU.sub.-- HSVEB LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 30-71 224-262 567-608 712-757 951- 1091- 1192- 1357- (TYPE 6/STRAIN GS) 1000 1181 1233 1400 PTEGU.sub.-- HSVSA LARGE TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 560-597 635-683 794-848 908-956 1108- 1155- 1399- 1487- (STRAIN AB4P) 1151 1246 1458 1549 1619- 1661- 1702- 1806- 1947- 1657 1695 1736 1843 1981 PTEGU.sub.-- VZVD PROBABLE LARGE TEGUMENT PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 520-558 560-598 615-652 672-710 777-822 846-898 948-986 1287- 1332 1434- 1502 PTERM.sub.-- ADE02 LARGE TEGUMENT PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 657-696 713-747 804-841 933-972 1117- 1415- 1528- 1572- 1158 1471 1562 1620 1633- 1719- 1945- 2727- 1705 1756 1986 2761 PTERM.sub.-- ADE05 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 2 490-572 PTERM.sub.-- ADE07 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 5 490-592 PTERM.sub.-- ADE12 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 7 491-559 PTJUN.sub.-- AVIS1 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 12 443-491 497-538 PTMAF.sub.-- AVIS4 TRANSFORMING PROTEIN JUN AVIAN SARCOMA VIRUS (STRAIN 17) 210-284 PTOP1.sub.-- SFVKA TRANSFORMING PROTEIN MAF AVIAN MUSCULOAPONEUROTIC 247-288 295-340 FIBROSARCOMA VIRUS AS42 PTOP2.sub.-- ASFB7 DNA TOPOISOMERASE SHOPE FIBROMA VIRUS (STRAIN KASZA) 127-183 269-310 PTOP2.sub.-- ASFM2 DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 146-180 481-515 601-642 945-979 1038- 1123- 1093 1162 PTSIS.sub.-- SMSAV DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS 146-180 480-514 600-641 902-936 944-978 1038- 1122- (ISOLATE MALAWI LIL 20/1) 1091 1161 PTYSY.sub.-- VZVD PDGF-RELATED TRANSFORMING SIMIAN SARCOMA VIRUS 16-71 PROTEIN P28-SIS PUBIL.sub.-- NPVOP THYMIDYLATE SYNTHASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 215-260 PUL01.sub.-- HCMVA UBIQUITIN-LIKE PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 43-80 POLYHEDROSIS VIRUS PUL03.sub.-- HSV11 HYPOTHETICAL PROTEIN UL1 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 169-203 PUL03.sub.-- HSV2H PROTEIN UL3 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 94-128 PUL03.sub.-- HSVEB PROTEIN UL3 HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 92-126 PUL04.sub.-- HSV11 GENE 60 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 70-104 PUL06.sub.-- EBV PROTEIN UL4 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 102-136 PUL06.sub.-- HCMVA VIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 104-145 313-347 376-410 PUL06.sub.-- HSV11 HYPOTHETICAL PROTEIN UL6 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 216-250 PUL06.sub.-- HSVEB VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 36-94 103-141 294-329 337-371 416-479 PUL06.sub.-- HSVSA VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 62-170 357-413 448-503 PUL06.sub.-- VZVD VIRION GENE 43 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 90-140 151-194 302-336 364-405 PUL08.sub.-- HCMVA VIRION GENE 54 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 87-131 350-409 704-738 PUL09.sub.-- HSVEB HYPOTHETICAL PROTEIN UL8 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 6-50 PUL09.sub.-- VZVD ORIGIN OF REPLICATION BINDING PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 174-208 PUL11.sub.-- HCMVA ORIGIN OF REPLICATION BINDING PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 122-163 PUL13.sub.-- HCMVA NONSENSE PUL14.sub.-- HCMVA HYPOTHETICAL PROTEIN UL13 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 47-81 185-227 PUL14.sub.-- HSVEB HYPOTHETICAL PROTEIN UL14 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 305-343 PUL14.sub.-- PRVN3 HYPOTHETICAL GENE 48 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 52-96 246-283 PUL14.sub.-- VZVD UL14 PROTEIN HOMOLOG PSEUDORABIES VIRUS (STRAIN NIA-3) 43-95 PUL16.sub.-- HSVEB HYPOTHETICAL GENE 46 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 61-103 PUL17.sub.-- HSV6U GENE 46 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 266-300 PUL21.sub.-- HSVEB PROTEIN 10R HERPES SIMPLEX VIRUS 239-280 (TYPE 6/STRAIN UGANDA-1102) PUL23.sub.-- HCMVA GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 44-78 421-474 PUL24.sub.-- HCMVA HYPOTHETICAL PROTEIN UL23 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 213-253 PUL24.sub.-- ILTVT HYPOTHETICAL PROTEIN UL24 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 5-39 PUL25.sub.-- HCMVA PROTEIN UL24 HOMOLOG INFECTIOUS LARYNGOTRACHEITIS VIRUS 161-195 (STRAIN THORNE V88 PUL25.sub.-- HSV11 HYPOTHETICAL PROTEIN UL25 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 255-341 351-399 PUL25.sub.-- HSVEB VIRION PROTEIN UL25 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 370-411 PUL25.sub.-- HSVSA VIRION PROTEIN UL25 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 364-413 PUL25.sub.-- ILTVT VIRION GENE 19 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 29-92 183-231 365-406 PUL25.sub.-- VZVD 64.1 KD VIRION PROTEIN INFECTIOUS LARYNGOTRACHEITIS VIRUS 38-84 165-206 (STRAIN THORNE V88 PUL31.sub.-- HCMVA VIRION GENE 34 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 340-388 PUL31.sub.-- HSVEB HYPOTHETICAL PROTEIN UL31 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 244-285 PUL31.sub.-- VZVD GENE 29 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 153-187 PUL32.sub.-- HSVEB GENE 27 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 163-197 PUL32.sub.-- VZVD MAJOR ENVELOPE GLYCOPROTEIN 300 EQUINE HERPESVIRUS TYPE 1 342-376 (STRAIN AB4P) (STRAIN AB1) PUL33.sub.-- HCMVA PROBABLE MAJOR ENVELOPE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 72-106 296-344 GLYCOPROTEIN 26 PUL33.sub.-- VZVD G-PROTEIN COUPLED RECEPTOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 94-135 309-352 HOMOLOG UL33 PUL34.sub.-- EBV GENE 25 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 29-63 PUL34.sub.-- HCMVA BFRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 159-200 PUL34.sub.-- HSV11 HYPOTHETICAL PROTEIN UL34 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 113-147 PUL35.sub.-- HCMVA VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 187-221 PUL37.sub.-- EBV HYPOTHETICAL PROTEIN UL35 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 231-268 PUL37.sub.-- HSV11 PROTEIN BOLF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 708-742 PUL37.sub.-- HSVEB PROTEIN UL37 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 853-891 PUL37.sub.-- HSVSA GENE 23 PROTEIN EQUINEHERPES VIRUS TYPE 1 (STRAIN AB4P) 82-137 311-345 614-648 715-750 781-822 PUL37.sub.-- VZVD GENE 63 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 6-65 682-741 PUL38.sub.-- HCMVA GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 719-753 786-827 PUL41.sub.-- VZVD HYPOTHETICAL PROTEIN UL38 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 10-51 PUL42.sub.-- HSV11 HOST SHUTOFF VIRION PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 330-366 PUL42.sub.-- HSVEB DNA-BINDING PROTEIN UL42 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 134-168 221-263 PUL43.sub.-- HCMVA DNA-BINDING GENE 18 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 138-172 PUL43.sub.-- HSVE4 HYPOTHETICAL PROTEIN UL43 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 72-109 PUL43.sub.-- VZVD MEMBRANE PROTEIN UL43 HOMOLOG EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 27-68 PUL45.sub.-- HSV1K GENE 15 MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 312-363 PUL45.sub.-- HSV1M PROTEIN UL45 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 96-137 PUL47.sub.-- HCMVA PROTEIN UL45 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN MP) 96-137 PUL47.sub.-- HSV11 PROTEIN UL47 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 114-165 448-485 745-856 PUL47.sub.-- HSV1F VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 473-518 PUL47.sub.-- HSVBP VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F 473-518 PUL47.sub.-- HSVE4 80.7 KD ALPHA TRANS-INDUCING PROTEIN BOVINE HERPESVIRUS TYPE 1 (STRAIN P8-2) 561-612 PUL47.sub.-- HSVEB 97 KD ALPHA TRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 183-246 582-620 825-866 PUL47.sub.-- VZVD 97 KD ALPHA TRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 219-253 371-412 817-866 PUL50.sub.-- HCMVA ALPHA TRANS-INDUCING FACTOR 91.8 KD VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 84-135 156-209 664-701 PROTEIN PUL51.sub.-- HSV11 PROTEIN UL50 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 155-189 PUL51.sub.-- HSVE4 PROTEIN UL51 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 118-169 PUL51.sub.-- HSVEB GENE 8 PROTEIN EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 121-162 PUL51.sub.-- VZVD GENE 8 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 120-161 PUL52.sub.-- EBV GENE 7 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 122-163 PUL52.sub.-- HSV11 PROBABLE DNA REPLICATION EPSTEIN-BARR VIRUS (STRAIN B95-8) 188-255 PROTEIN BSLF1 PUL52.sub.-- HSVEB DNA REPLICATION PROTEIN UL52 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 189-223 PUL52.sub.-- HSVSA DNA REPLICATION PROTEIN UL52 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 141-182 929-970 PUL52.sub.-- VZVD PROBABLE DNA REPLICATION GENE 56 HERPESVIRUS SAIMIRI (STRAIN 11) 445-483 PROTEIN PUL53.sub.-- HCMVA PROBABLE DNA REPLICATION GENE 6 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 301-342 PROTEIN PUL55.sub.-- HSV2H PROTEIN UL53 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 12-48 PUL64.sub.-- HCMVA PROTEIN UL55 HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 151-185 PUL70.sub.-- HCMVA HYPOTHETICAL PROTEIN UL64 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 32-73 PUL74.sub.-- HCMVA PROBABLE DNA REPLICATION PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 39-99 UL70 PUL87.sub.-- HSV6U HYPOTHETICAL PROTEIN UL74 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 43-79 PUL87.sub.-- HSVSA HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS 729-770 (TYPE 6/STRAIN UGANDA-1102) PUL88.sub.-- HCMVA HYPOTHETICAL GENE 24 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 366-400 582-616 PUL91.sub.-- HSVSA HYPOTHETICAL PROTEIN UL88 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 357-391 PUL92.sub.-- EBV HYPOTHETICAL GENE 30 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 24-58 PUL92.sub.-- HCMVA HYPOTHETICAL PROTEIN BDLF4 EPSTEIN-BARR VIRUS (STRAIN B95-8) 107-144 188-222 PUL92.sub.-- HSV6U HYPOTHETICAL PROTEIN UL92 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 79-116 PUL92.sub.-- HSVSA HYPOTHETICAL PROTEIN 9R HERPES SIMPLEX VIRUS 101-145 174-216 (TYPE 6/STRAIN UGANDA-1102) PUL93.sub.-- HCMVA HYPOTHETICAL GENE 31 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 88-122 PUL95.sub.- - HCMVA PROTEIN UL93 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 23-57 299-384 PUL95.sub.-- HSV6U HYPOTHETICAL PROTEIN UL95 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 34-71 259-293 PUL96.sub.-- HCMVA HYPOTHETICAL PROTEIN 13R HERPES SIMPLEX VIRUS 73-151 233-270 (TYPE 6/STRAIN UGANDA-1102) PUL96.sub.-- HSV6U HYPOTHETICAL PROTEIN UL96 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 51-103 PUL96.sub.-- HSVSA HYPOTHETICAL PROTEIN 14R HERPES SIMPLEX VIRUS 53-113 (TYPE 6/STRAIN UGANDA-1102) PULA2.sub.-- HCMVA HYPOTHETICAL GENE 35 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 45-100 PULA4.sub.- - HCMVA HYPOTHETICAL PROTEIN UL102 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 6-40 758-792 PULD0.sub.-- HCMVA VIRION PROTEIN UL104 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 1-56 130-171 330-364 439-492 541-575 PUNG.sub.-- HSV11 HYPOTHETICAL PROTEIN UL130 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 84-125 PUNG.sub.-- HSV23 URACIL-DNA GLYCOSYLASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 227-268 PUNG.sub.-- HSV2H URACIL-DNA GLYCOSYLASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333) 188-229 PUNG.sub.-- HSVSA URACIL-DNA GLYCOSYLASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52 148-189 PUNG.sub.-- SFVKA URACIL-DNA GLYCOSYLASE HERPESVIRUS SAIMIRI (STRAIN 11) 135-176 PUS02.sub.-- HSVEB URACIL-DNA GLYCOSYLASE SHOPE FIBROMA VIRUS (STRAIN KASZA) 81-115 PUS02.sub.-- HSVEK GENE 68 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 79-120 PUS07.sub.-- HCMVA US1 PROTEIN EQUINE HERPESVIRUS TYPE 1 86-120 (STRAIN KENTUCKY A) PUS11.sub.-- HCMVA HYPOTHETICAL PROTEIN HXLF5 2-36 PUS14.sub.-- HCMVA HYPOTHETICAL PROTEIN HXLF1 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) PUS18.sub.-- HCMVA HYPOTHETICAL PROTEIN HVLF4 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 3-51 PUS23.sub.-- HCMVA MEMBRANE PROTEIN HWLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 187-225 PUS24.sub.-- HCMVA HYPOTHETICAL PROTEIN HHLF7 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 294-335 535-578 PUS26.sub.-- HCMVA HYPOTHETICAL PROTEIN HHLF6 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 135-172 PUS27.sub.-- HCMVA HYPOTHETICAL PROTEIN HHLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 535-584 PUS30.sub.-- HCMVA G-PROTEIN COUPLED RECEPTOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 6-40 HOMOLOG US27 PV125.sub.-- AMVLE HYPOTHETICAL PROTEIN HHRF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 135-169 274-312 PV143.sub.-- NPVAC 125 KD PROTEIN ALFALFA MOSAIC VIRUS 18-52 326-367 591-649 (STRAIN 425/ISOLATE LEIDEN PV16K.sub.-- TRVPS HELICASE AUTOGRAPHA CALIFORNICA NUCLEAR 313-350 1114- 1179- POLYHEDROSIS VIRUS 1150 1213 PV16K.sub.-- TRVSY 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PSG) 75-117 PV1A.sub.-- BBMV 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN SYM) 75-117 PV1A.sub.-- BMV 1A PROTEIN BROAD BEAN MOTTLE VIRUS 21-55 349-405 492-526 710-751 837-884 890-924 PV1A.sub.-- CCMV 1A PROTEIN BROME MOSAIC VIRUS 4-66 348-411 PV1A.sub.-- CMVFN 1A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 4-53 242-276 348-389 487-526 PV1A.sub.-- CMVO 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 11-66 393-434 584-619 868-916 PV1A.sub.-- CMVQ 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN O) 11-66 393-434 584-619 868-916 PV1A.sub.-- PSVJ 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Q) 11-66 393-434 PV1A.sub.-- TAV 1A PROTEIN PEANUT STUNT VIRUS (STRAIN J) 4-66 PV23K.sub.-- HSVTH 1A PROTEIN TOMATO ASPERMY VIRUS 11-59 392-433 857-923 PV24K.sub.-- BDV 23.5 KD PROTEIN TURKEY HERPESVIRUS (STRAIN H2) 177-211 PV25K.sub.-- NPVAC 24 KD ANTIGEN BORNA DISEASE VIRUS 63-121 130-171 PV28K.sub.-- PLRV1 25 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 4-50 POLYHEDROSIS VIRUS PV28K.sub.-- PLRVW 28 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 116-150 PV290.sub.-- ASFL5 28 KD PROTEIN POTATO LEAFROLL VIRUS 116-150 (STRAIN WAGENINGEN) PV29K.sub.-- PEBV LIS 290 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN LIS57) 138-183 PV29K.sub.-- TRVSY 29.6 KD PROTEIN EARLY BROWNING VIRUS 115-192 PV29K.sub.-- TRVTC 29 KD PROTEIN TOBACCO RATTLE VIRUS 167-201 (STRAIN SYM), AND (STRAIN PSG) PV2A.sub.-- CCMV 29 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 45-79 PV2A.sub.-- CMVFN 2A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 768-806 PV2A.sub.-- PSVJ 2A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 386-420 PV2A.sub.-- TAV 2A PROTEIN PEANUT STUNT VIRUS (STRAIN J) 717-751 PV30K.sub.-- TRVTC 2A PROTEIN TOMATO ASPERMY VIRUS 722-756 PV360.sub.-- ASFB7 29.1 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 105-218 PV362.sub.-- ASFB7 K'360 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 53-87 151-192 PV363.sub.-- ASFB7 K'362 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 54-102 161-212 290-324 PV3A.sub.-- BMV D'363 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 153-199 PV3A.sub.-- CMVFN 3A PROTEIN BROME MOSAIC VIRUS 11-45 PV3A.sub.-- CMVM 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 215-255 PV3A.sub.-- CMVO 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN M) 215-255 PV3A.sub.-- CMVY 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN O) 215-255 PV51K.sub.-- ACLSV 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Y) 215-255 PV51K.sub.-- BWYVF 50.8 KD PROTEIN APPLE CHLOROTIC LEAF SPOT VIRUS 72-106 PV51K.sub.-- BWYVG 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 113-147 196-233 404-451 PV56K.sub.-- PLRV1 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE GB1) 113-147 196-233 407-451 PV56K.sub.-- PLRVW 56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 47-81 438-472 PV58K.sub.-- BSMV 56 KD PROTEIN POTATO LEAFROLL VIRUS 47-81 438-475 (STRAIN WAGENINGEN) PV66K.sub.-- BWYVF 58 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS 128-162 323-371 PV70K.sub.-- PLRV1 66.2 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 480-521 PV70K.sub.-- PLRVW 69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 98-144 514-548 PV90K.sub.-- AMVLE 69.7 KD PROTEIN POTATO LEAFROLL VIRUS 98-144 409-443 514-548 (STRAIN WAGENINGEN) PVA04.sub.-- VACCC 90 KD PROTEIN ALFALFA MOSAIC VIRUS 107-141 (STRAIN 425/ISOLATE LEIDEN) PVA04.sub.-- VACCV PROTEIN A4 VACCINIA VIRUS (STRAIN COPENHAGEN) 32-66 231-275 PVA04.sub.-- VARV PROTEIN A4 VACCINIA VIRUS (STRAIN WR) 32-66 231-275 PVA06.sub.-- VACCC PROTEIN A4 VARIOLA VIRUS 22-66 210-265 PVA06.sub.-- VACCV PROTEIN A6 VACCINIA VIRUS (STRAIN COPENHAGEN) 97-213 314-355 PVA06.sub.-- VARV PROTEIN A6 VACCINIA VIRUS (STRAIN WR) 96-212 313-354 PVA08.sub.-- VACCC PROTEIN A6 VARIOLA VIRUS 97-213 313-358 PVA08.sub.-- VARV PROTEIN A8 VACCINIA VIRUS (STRAIN COPENHAGEN) 176-236 PVA09.sub.-- VACCC PROTEIN A8 VARIOLA VIRUS 176-236 PVA09.sub.-- VARV PROTEIN A9 VACCINIA VIRUS (STRAIN COPENHAGEN) 46-81 PVA11.sub.-- VACCC PROTEIN A9 VARIOLA VIRUS 46-95 PVA11.sub.-- VARV PROTEIN A11 VACCINIA VIRUS (STRAIN COPENHAGEN) 97-134 141-175 219-283 PVA12.sub.-- VACCC PROTEIN A11 VARIOLA VIRUS 98-176 220-284 PVA12.sub.-- VARV PROTEIN A12 VACCINIA VIRUS (STRAIN COPENHAGEN) 114-148 PVA18.sub.-- VACCC PROTEIN A12 VARIOLA VIRUS 111-152 PVA18.sub.-- VACCV 56 KD ABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN 433-467 PVA18.sub.-- VARV 56 KD ABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAIN WR) 307-341 433-467 PVA20.sub.-- VACCC 56 KD ABORTIVE LATE PROTEIN VARIOLA VIRUS 307-341 433-467 PVA20.sub.-- VARV PROTEIN A20 VACCINIA VIRUS (STRAIN COPENHAGEN) 1-67 PVA22.sub.-- VACCC PROTEIN A20 VARIOLA VIRUS 1-67 PVA22.sub.-- VARV PROTEIN A22 VACCINIA VIRUS (STRAIN COPENHAGEN) 28-69 PVA23.sub.-- VACCC PROTEIN A22 VARIOLA VIRUS 39-80 PVA23.sub.-- VARV PROTEIN A23 VACCINIA VIRUS (STRAIN COPENHAGEN) 95-143 173-207 255-289 344-382 PVA31.sub.-- VARV PROTEIN A23 VARIOLA VIRUS 95-143 173-207 255-289 344-382 PVA32.sub.-- VACCV PROTEIN A31 VARIOLA VIRUS 88-126 PVA32.sub.-- VARV PROTEIN A32 VACCINIA VIRUS (STRAIN WR), AND (STRAIN COPENHAGEN PVA33.sub.-- VARV PROTEIN A32 VARIOLA VIRUS 217-251 PVA36.sub.-- VACCV PROTEIN A33 VARIOLA VIRUS 63-97 PVA36.sub.-- VARV PROTEIN A36 PRECURSOR VACCINIA VIRUS 26-67 109-155 (STRAIN WR), AND (STRAIN COPENHAGEN) PVA37.sub.-- VACCC PROTEIN A36 PRECURSOR VARIOLA VIRUS 26-67 PVA37.sub.-- VACCV PROTEIN A37 VACCINIA VIRUS (STRAIN COPENHAGEN) 24-65 PVA38.sub.-- VACCC PROTEIN A37 VACCINIA VIRUS (STRAIN WR) 24-65 PVA38.sub.-- VACCV PROTEIN A38 VACCINIA VIRUS (STRAIN COPENHAGEN) 44-91 PVA38.sub.-- VARV PROTEIN A38 VACCINIA VIRUS (STRAIN WR) 44-91 PVA39.sub.-- VACCC PROTEIN A38 VARIOLA VIRUS 44-91 PVA39.sub.-- VACCV PROTEIN A39 VACCINIA VIRUS (STRAIN COPENHAGEN) 37-71 PVA46.sub.-- VACCC PROTEIN A39 VACCINIA VIRUS (STRAIN WR) 75-109 PVA46.sub.-- VACCV PROTEIN A46 VACCINIA VIRUS (STRAIN COPENHAGEN) 81-126 PVA46.sub.-- VARV PROTEIN A46 VACCINIA VIRUS (STRAIN WR) 81-126 PVA47.sub.-- VACCC PROTEIN A46 VARIOLA VIRUS 81-126 PVA47.sub.-- VACCV PROTEIN A47 VACCINIA VIRUS (STRAIN COPENHAGEN) 62-96 143-184 PVA47.sub.-- VARV PROTEIN A47 VACCINIA VIRUS (STRAIN WR) 62-96 143-184 PVA49.sub.-- VACCC PROTEIN A47 VARIOLA VIRUS 62-96 143-184 PVA49.sub.-- VACCV PROTEIN A49 VACCINIA VIRUS (STRAIN COPENHAGEN) 3-40 126-160 PVA49.sub.-- VARV PROTEIN A49 VACCINIA VIRUS (STRAIN WR) 3-40 126-160 PVA52.sub.-- VACCC PROTEIN A49 VARIOLA VIRUS 3-40 126-160 PVA52.sub.-- VACCV PROTEIN A52 VACCINIA VIRUS (STRAIN COPENHAGEN) 91-132 PVA57.sub.-- VACCC PROTEIN A52 VACCINIA VIRUS (STRAIN WR) 91-132 PVA57.sub.-- VACCV GUANYLATE KINASE HOMOLOG VACCINIA VIRUS (STRAIN COPENHAGEN) 134-168 PVAL1.sub.-- MSVK GUANYLATE KINASE HOMOLOG VACCINIA VIRUS (STRAIN WR) 134-168 PVAL1.sub.-- MSVN AL1 PROTEIN MAIZE STREAK VIRUS (KENYAN ISOLATE) 230-269 PVAL1.sub.-- MSVS AL1 PROTEIN MAIZE STREAK VIRUS (NIGERIAN ISOLATE) 228-262 PVAL1.sub.-- SLCV AL1 PROTEIN MAIZE STREAK VIRUS 228-262 (SOUTH-AFRI CAN ISOLATE) PVAL1.sub.-- TYDVA AL1 PROTEIN SQUASH LEAF CURL VIRUS 117-151 PVAL3.sub.-- ABMVW AL1 PROTEIN TOBACCO YELLOW DWARF VIRUS 191-225 (STRAIN AUSTRALIA) PVAL3.sub.-- BGMV AL3 PROTEIN ABUTILON MOSAIC VIRUS 44-78 83-124 (ISOLATE WEST INDIA) PVAL3.sub.-- PYMVV AL3 PROTEIN BEAN GOLDEN MOSAIC VIRUS 44-78 83-124 PVAL3.sub.-- SLCV AL3 PROTEIN POTATO YELLOW MOSAIC VIRUS 30-78 87-121 (ISOLATE VENEZUELA) PVAL3.sub.-- TGMV AL3 PROTEIN SQUASH LEAF CURL VIRUS 46-80 91-125 PVAT.sub.-- CAMVC AL3 PROTEIN TOMATO GOLDEN MOSAIC VIRUS 44-78 PVAT.sub.-- CAMVD APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70 84-127 (STRAIN CM-1841) PVAT.sub.-- CAMVE APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70 (STRAIN D/H) PVAT.sub.-- CAMVN APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70 93-127 (STRAIN BBC) PVAT.sub.-- CAMVP APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70 93-127 (STRAIN NY8153) PVAT.sub.-- CAMVS APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70 93-127 (STRAIN PV147) PVAT.sub.-- CAMVW APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70 93-130 (STRAIN STRASBOURG) PVAT.sub.-- CERV APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 36-70 (STRAIN W260) PVB03.sub.-- VACCV APHID TRANSMISSION PROTEIN CARNATION ETCHED RING VIRUS 99-138 PVB04.sub.-- VACCC PROTEIN B3 VACCINIA VIRUS (STRAIN WR) 108-142 PVB04.sub.-- VACCV PROTEIN B4 VACCINIA VIRUS (STRAIN COPENHAGEN) 89-123 321-372 496-530 PVB04.sub.-- VARV PROTEIN B4 VACCINIA VIRUS (STRAIN WR) 89-123 321-372 PVB05.sub.-- VACC0 PROTEIN B4 VARIOLA VIRUS 89-123 321-372 496-530 PVB05.sub.-- VACCC PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN LC16MO) 254-298 PRECURSOR PVB05.sub.-- VACCL PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 254-298 PRECURSOR PVB05.sub.-- VACCV PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN LISTER) 254-298 PRECURSOR PVB07.sub.-- VACCV PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN WR) 254-298 PRECURSOR PVB08.sub.-- VACCC PROTEIN B7 PRECURSOR VACCINIA VIRUS 28-62 (STRAIN WR), AND (STRAIN COPENHAGEN) PVB08.sub.-- VACCV PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 26-60 PVB18.sub.-- VACCC PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN WR) 26-60 PVB18.sub.-- VACCV PROTEIN B18 VACCINIA VIRUS (STRAIN COPENHAGEN) 337-375 491-532 PVB18.sub.-- VARV PROTEIN B18 VACCINIA VIRUS (STRAIN WR) 337-375 491-532 PVB19.sub.-- VACCC PROTEIN B18 VACCINIA VIRUS 337-378 491-532 PVB19.sub.-- VACCD SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 87-121 PVB19.sub.-- VACCV SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN DAIREN I) 85-119 PVB20.sub .-- VACCC SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN WR) 85-119 PVB21.sub.-- VACCV PROTEIN B20 VACCINIA VIRUS (STRAIN COPENHAGEN) 48-85 PVBL1.sub.-- BGMV PROTEIN B21 VACCINIA VIRUS (STRAIN WR) 61-95 PVBL1.sub.-- SLCV BL1 PROTEIN BEAN GOLDEN MOSAIC VIRUS 159-193 PVBL1.sub.-- TGMV BL1 PROTEIN SQUASH LEAF CURL VIRUS 159-193 PVBR1.sub.-- BGMV BL1 PROTEIN TOMATO GOLDEN MOSAIC VIRUS 159-193 PVBR1.sub.-- SLCV BR1 PROTEIN BEAN GOLDEN MOSAIC VIRUS 172-206 PVBR1.sub.-- TGMV BR1 PROTEIN SQUASH LEAF CURL VIRUS 20-61 PVC02.sub.-- VACCC BR1 PROTEIN TOMATO GOLDEN MOSAIC VIRUS 25-59 PVC02.sub.-- VACCV PROTEIN C2 VACCINIA VIRUS (STRAIN COPENHAGEN) 37-82 262-302 391-442 PVC04.sub.-- SFVKA PROTEIN C2 VACCINIA VIRUS (STRAIN WR) 37-82 262-302 391-442 PVC04.sub.-- VACCC PROTEIN C4 SHOPE FIBROMA VIRUS (STRAIN KASZA) 175-223 374-408 PVC04.sub.-- VACCV PROTEIN C4 VACCINIA VIRUS (STRAIN COPENHAGEN) 12-46 PVC04.sub.-- VARV PROTEIN C4 VACCINIA VIRUS (STRAIN WR) 12-46 PVC05.sub.-- SFVKA PROTEIN C4 VARIOLA VIRUS 12-46 PVC05.sub.-- VACCC HYPOTHETICAL PROTEIN C5 SHOPE FIBROMA VIRUS (STRAIN KASZA) 82-125 PVC05.sub.-- VACCV PROTEIN C5 VACCINIA VIRUS (STRAIN COPENHAGEN) 31-68 PVC05.sub.-- VARV PROTEIN C5 VACCINIA VIRUS (STRAIN WR) 31-68 PVC08.sub.-- SFVKA PROTEIN C5 VARIOLA VIRUS 32-70 73-121 PVC09.sub.-- SFVKA HYPOTHETICAL PROTEIN C8 SHOPE FIBROMA VIRUS (STRAIN KASZA) 45-86 PVC09.sub.-- VACCC HYPOTHETICAL PROTEIN C9 SHOPE FIBROMA VIRUS (STRAIN KASZA) 63-106 PVC09.sub.-- VACCV PROTEIN C9 VACCINIA VIRUS (STRAIN COPENHAGEN) 82-116 168-226 289-325 575-612 PVC10.sub.-- VACCC PROTEIN C9 VACCINIA VIRUS (STRAIN WR) 82-116 168-226 289-323 575-612 PVC10.sub.-- VACCV PROTEIN C10 VACCINIA VIRUS (STRAIN COPENHAGEN) 136-180 PVC10.sub.-- VARV PROTEIN C10 VACCINIA VIRUS (STRAIN WR) 136-176 PVC12.sub.-- SFVKA PROTEIN C10 VARIOLA VIRUS 136-170 PVC13.sub.-- SFVKA HYPOTHETICAL PROTEIN C12 SHOPE FIBROMA VIRUS (STRAIN KASZA) 2-36 PVC16.sub.-- VACCC PROTEIN C13 SHOPE FIBROMA VIRUS (STRAIN KASZA) 3-66 137-182 189-240 PVC17.sub.-- VACCC PROTEIN C16/B22 VACCINIA VIRUS (STRAIN COPENHAGEN) 142-176 PVC18.sub.-- VACCC PROTEIN C17/B23 VACCINIA VIRUS (STRAIN COPENHAGEN) 100-155 325-359 PVC19.sub.-- SFVKA PROTEIN C18/B24 VACCINIA VIRUS (STRAIN COPENHAGEN) 40-98 PVC19.sub.-- VACCC PROTEIN C19 SHOPE FIBROMA VIRUS (STRAIN KASZA) 56-97 PVCAP.sub.-- EBV PROTEIN C19/B25 VACCINIA VIRUS (STRAIN COPENHAGEN) 218-252 PVCAP.sub.-- HCMVA MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 150-184 670-709 PVCAP.sub.-- HSV11 MAJOR CAPSID PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 136-174 191-225 260-294 PVCAP.sub.-- HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 116-175 308-356 PVCAP.sub.-- HSVEB MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS 136-174 230-266 311-382 PVCAP.sub.-- HSVSA MAJOR CAPSID PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 150-184 304-352 PVCAP.sub.-- PRVIS MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 479-520 673-714 755-799 PVCAP.sub.-- VZVD MAJOR CAPSID PROTEIN PSEUDORABIES VIRUS (STRAIN INDIANA S) 105-160 292-326 PVCG3.sub.-- NPVAC MAJOR CAPSID PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 128-198 316-350 PVD05.sub.-- FOWP1 DNA-BINDING PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 110-248 POLYHEDROSIS VIRUS PVD05.sub.-- VACCC 92.6 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 145-181 PVD05.sub.-- VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN COPENHAGEN) 123-157 PVD05.sub.-- VARV PROTEIN D5 VACCINIA VIRUS (STRAIN WR) 123-157 PVD09.sub.-- VACCC PROTEIN D5 VARIOLA VIRUS 123-157 PVD09.sub.-- VACCV PROTEIN D9 VACCINIA VIRUS (STRAIN COPENHAGEN) 126-160 PVD09.sub.-- VARV PROTEIN D9 VACCINIA VIRUS (STRAIN WR) 126-160 PVD10.sub.-- FOWP1 PROTEIN D9 VARIOLA VIRUS 126-160 PVD10.sub.-- SFVKA PROTEIN D10 FOWLPOX VIRUS (STRAIN FP-1) 65-99 188-222 PVD10.sub.-- VARV PROTEIN D10 SHOPE FIBROMA VIRUS (STRAIN KASZA) 4-52 PVDBP.sub.-- CAMVC PROTEIN D10 VARIOLA VIRUS 67-105 PVDBP.sub.-- CAMVD DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841) 1-35 PVDBP.sub.-- CAMVE DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 1-35 PVDBP.sub.-- CAMVN DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC) 1-35 PVDBP.sub.-- CAMVS DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 1-35 PVE02.sub.-- VACCC DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS 1-35 (STRAIN STRASBOURG) PVE02.sub.-- VACCV PROTEIN E2 VACCINIA VIRUS (STRAIN COPENHAGEN) 282-336 PVE02.sub.-- VARV PROTEIN E2 VACCINIA VIRUS (STRAIN WR) 282-336 PVE03.sub.-- VACCC PROTEIN E2 VARIOLA VIRUS 282-336 PVE03.sub.-- VACCV PROTEIN E3 VACCINIA VIRUS (STRAIN COPENHAGEN) 17-61 PVE03.sub.-- VARV PROTEIN E3 VACCINIA VIRUS (STRAIN WR) 17-61 PVE05.sub.-- VACCC PROTEIN E3 VARIOLA VIRUS 17-61 PVE05.sub.-- VACCD PROTEIN E5 VACCINIA VIRUS (STRAIN COPENHAGEN) 28-93 PVE05.sub.-- VACCV PROTEIN E5 VACCINIA VIRUS (STRAIN DAIREN 1) 38-103 PVE05.sub.-- VARV PROTEIN E5 VACCINIA VIRUS (STRAIN WR) 38-103 PVE06.sub.-- VACCC PROTEIN E5 VARIOLA VIRUS 38-103 PVE06.sub.-- VACCV PROTEIN E6 VACCINIA VIRUS (STRAIN COPENHAGEN) 105-139 232-266 PVE06.sub.-- VARV PROTEIN E6 VACCINIA VIRUS (STRAIN WR) 105-139 232-266 PVE18.sub.-- NPVAC PROTEIN E6 VARIOLA VIRUS 105-139 367-401 PVE1.sub.-- HPV1A EARLY 18.5 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 112-163 POLYHEDROSIS VIRUS PVE1.sub.-- HPV31 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 137-171 PVE1.sub.-- HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 56-90 PVE1.sub.-- HPV35 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 33-67 133-167 PVE1.sub.-- HPV39 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 56-90 PVE1.sub.-- HPV41 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 59-96 PVE1.sub.-- HPV42 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 55-89 312-346 PVE1.sub.-- HPV58 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 42 25-87 PVE1.sub.-- HPV6B E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 33-67 119-174 PVE1.sub.-- PAPVE E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 265-299 PVE26.sub.-- NPVAC E1 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS 176-210 PVE2.sub.-- CRPVK EARLY 25.9 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 72-117 POLYHEDROSIS VIRUS PVE2.sub.-- HPV05 PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE) 3-44 PAPILLOMAVIRUS (STRAIN KANS PVE2.sub.-- HPV08 PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 5-57 276-310 342-383 437-471 PVE2.sub.-- HPV16 PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 5-55 148-182 PVE2.sub.-- HPV18 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16 61-105 315-349 PVE2.sub.-- HPV1A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 65-100 PVE2.sub.-- HPV2A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 3-37 159-193 PVE2.sub.-- HPV31 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 2A 13-47 159-193 PVE2.sub.-- HPV33 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 61-105 PVE2.sub.-- HPV35 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 63-101 297-331 PVE2.sub.-- HPV39 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 62-106 158-192 PVE2.sub.-- HPV41 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 74-110 323-357 PVE2.sub.-- HPV47 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 6-54 PVE2.sub.-- HPV51 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 5-55 148-182 PVE2.sub.-- HPV57 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 154-191 PVE2.sub.-- HPV58 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 13-47 179-213 PVE2.sub.-- HPV5B E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 2-36 PVE2.sub.-- PAPVD PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 5-57 PVE2.sub.-- PAPVE PROBABLE E2 PROTEIN DEER PAPILLOMAVIRUS 107-141 PVE2.sub.-- PCPV1 PROBABLE E2 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS 113-150 PVE2.sub.-- RHPV1 E2 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS TYPE 1 318-361 PVE39.sub.-- NPVAC E2 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1 62-106 307-341 PVE39.sub.-- NPVOP EARLY 39 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 20-57 POLYHEDROSIS VIRUS PVE4.sub.-- HPV18 EARLY 39 KD PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 119-156 POLYHEDROSIS VIRUS PVE4.sub.-- HPV41 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 42-86 PVE5.sub.-- HPV5B PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 63-97 PVEF.sub.-- GVTN PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 3-40 96-130 PVENV.sub.-- BEV VIRAL ENHANCING FACTOR (VEF) TRICHOPLUSIA NI GRANULOSIS VIRUS (TNGV) 681-719 (104 KD GLYCOP PVENV.sub.-- DHVI1 ENVELOPE PROTEIN BERNE VIRUS (BEV) 195-229 PVENV.sub.-- MCV1 ENVELOPE GLYCOPROTEIN PRECURSOR DHORI VIRUS (STRAIN INDIAN/1313/61 ) (DHO) 318-366 PVENV.sub.-- MCV2 MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM VIRUS SUBTYPE 1 252-286 (43 KD PROTEIN) (P43K) (MCVI) PVENV.sub.-- THOGV MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM VIRUS SUBTYPE 2 252-286 (43 KD PROTEIN) (P43K) (MCVII) PVENV.sub.-- VACCC ENVELOPE GLYCOPROTEIN PRECURSOR THOGOTO VIRUS (THO) 313-354 (SURFACE PVENV.sub.-- VACCI MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 257-295 (37 KD PROTEIN) (P37K) PVENV.sub.-- VACCP MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN 1HD-J) 257-295 (37 KD PROTEIN) (P37K) PVENV.sub.-- VACCV MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN L-IVP) 257-295 (37 KD PROTEIN) (P37K) PVENV.sub.-- VARV MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN WR) 257-295 (37 KD PROTEIN) (P37K) PVETS.sub.-- NPVAC MAJOR ENVELOPE PROTEIN VARIOLA VIRUS 257-295 (37 KD PROTEIN) (P37K) PVF01.sub.-- VACCC ECORI-T SITE PROTEIN ETS AUTOGRAPHA CALIFORNICA NUCLEAR 1-53 POLYHEDROSIS VIRUS ( PVF01.sub.-- VACCV PROTEIN F1 VACCINIA VIRUS (STRAIN COPENHAGEN), 46-80 124-158 AND VACCINIA VIRUS PVF03.sub.-- VACCC PROTEIN F1 (FRAGMENT) VACCINIA VIRUS (STRAIN WR) 46-80 124-158 PVF03.sub.-- VACCV PROTEIN F3 VACCINIA VIRUS (STRAIN COPENHAGEN) 71-110 PVF05.sub.-- VACCC PROTEIN F3 VACCINIA VIRUS (STRAIN WR) 71-110 PVF05.sub.-- VACCP 36 KD MAJOR MEMBRANE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 81-129 282-320 PRECURSOR PVF05.sub.-- VACCV 36 KD MAJOR MEMBRANE PROTEIN VACCINIA VIRUS (STRAIN L-IVP) 81-129 282-320 PRECURSOR PVF05.sub.-- VARV 36 KD MAJOR MEMBRANE PROTEIN VACCINIA VIRUS (STRAIN WR) 81-129 283-321 PRECURSOR PVF06.sub.-- VARV 36 KD MAJOR MEMBRANE PROTEIN VARIOLA VIRUS 81-122 281-322 PRECURSOR PVF11.sub.-- VACCC PROTEIN F6 VARIOLA VIRUS 8-44 PVF11.sub.-- VACCP PROTEIN F11 VACCINIA VIRUS (STRAIN COPENHAGEN) 217-258 269-315 PVF11.sub.-- VARV PROTEIN F11 VACCINIA VIRUS (STRAIN L-IVP) 213-254 265-311 PVF12.sub.-- VACCC PROTEIN F11 VARIOLA VIRUS 41-75 269-315 PVF12.sub.-- VACCP PROTEIN F12 VACCINIA VIRUS (STRAIN COPENHAGEN) 1-67 102-143 199-236 350-388 544-581 PVF12.sub.-- VARV PROTEIN F12 VACCINIA VIRUS (STRAIN L-IVP) 1-67 102-143 199-236 350-388 544-581 PVF16.sub.-- VACCC PROTEIN F12 VARIOLA VIRUS 1-67 199-236 350-388 547-581 PVF16.sub.-- VACCP PROTEIN F16 VACCINIA VIRUS (STRAIN COPENHAGEN) 155-194 PVF16.sub.-- VARV PROTEIN F16 VACCINIA VIRUS (STRAIN L-IVP) 155-194 PVFP3.sub.-- FOWPV PROTEIN F16 VARIOLA VIRUS 155-194 PVFP4.sub.-- FOWPV PROTEIN FP3 FOWLPOX VIRUS 1-43 PVFP7.sub.-- FOWPV PROTEIN FP4 FOWLPOX VIRUS 139-173 239-273 PVFPL.sub.-- FOWP1 PROTEIN FP7 FOWLPOX VIRUS 23-57 PVFUS.sub.-- VACCC FPLEET PROTEIN (FRAGMENT) FOWLPOX VIRUS (STRAIN FP-1) 77-111 PVFUS.sub.-- VACCV 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 30-64 PVG01.sub.-- HSVI1 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN WR) 30-64 PVG01.sub.-- VACCC HYPOTHETICAL GENE 1 PROTEIN ICTALURID HERPESVIRUS 1 271-306 512-563 591-647 730-764 (CHANNEL CATFISH VIRUS) (CCV) PVG01.sub.-- VACCV PROTEIN G1 VACCINIA VIRUS (STRAIN COPENHAGEN) 301-339 PVG01.sub.-- VARV PROTEIN G1 (FRAGMENT) VACCINIA VIRUS (STRAIN WR) 240-278 PVG03.sub.-- HSVEB PROTEIN G1 VARIOLA VIRUS 301-339 PVG03.sub.-- HSVEK GENE 3 PROTEIN EQUINE HERPESVIRUS TYPE 1 143-177 (STRAIN AB4P) (EHV-1) PVG03.sub.-- VARV GENE 3 PROTEIN (ORF L1) EQUINE HERPESVIRUS TYPE 1 143-177 (STRAIN KENTUCKY A) (EHV-1) PVG05.sub.-- VACCC PROTEIN G3 VARIOLA VIRUS 64-98 PVG05.sub.-- VARV PROTEIN G5 VACCINIA VIRUS (STRAIN COPENHAGEN) 117-158 255-289 355-389 PVG06.sub.-- HSVI1 PROTEIN G5 VARIOLA VIRUS 117-158 255-289 355-389 PVG07.sub.-- HSVI1 HYPOTHETICAL GENE 6 MEMBRANE ICTALURID HERPESVIRUS 1 61-109 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG07.sub.-- VACCC HYPOTHETICAL GENE 7 MEMBRANE ICTALURID HERPESVIRUS 1 69-103 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG07.sub.-- VARV PROTEIN G7 VACCINIA VIRUS (STRAIN COPENHAGEN) 114-175 324-358 PVG09.sub.-- VACCC PROTEIN G7 VARIOLA VIRUS 114-175 324-358 PVG09.sub.-- VACCV PROTEIN F1 (PROTEIN G9) VACCINIA VIRUS (STRAIN COPENHAGEN) 304-338 PVG09.sub.-- VARV PROTEIN F1 (PROTEIN G9) VACCINIA VIRUS (STRAIN WR) 304-338 (FRAGMENT) PVG10.sub.-- HSVI1 PROTEIN F1 (PROTEIN G9) VARIOLA VIRUS 304-338 PVG12.sub.-- SPV1R HYPOTHETICAL GENE 10 MEMBRANE ICTALURID HERPESVIRUS 1 63-97 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG16.sub.-- HSVSA GENE 12 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 11-45 PVG17.sub.-- HSVI1 HYPOTHETICAL GENE 16 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 58-95 PVG18.sub.-- HSVI1 HYPOTHETICAL GENE 17 PROTEIN ICTALURID HERPESVIRUS 1 92-129 177-211 (CHANNEL CATFISH VIRUS) (CCV) PVG1L.sub.-- AMEPV HYPOTHETICAL GENE 18 PROTEIN ICTALURID HERPESVIRUS 1 174-208 215-256 (CHANNEL CATFISH VIRUS) (CCV) PVG1.sub.-- SPV1R G1L PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 407-441 PVG1.sub.-- SPV4 CAPSID PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 136-170 256-297 320-357 PVG22.sub.-- HSVI1 CAPSID PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 287-321 PVG24.sub.-- HSVI1 HYPOTHETICAL GENE 22 PROTEIN ICTALURID HERPESVIRUS 1 117-158 437-629 660-892 899- (CHANNEL CATFISH VIRUS) (CCV) 1055 PVG27.sub.-- HSVI1 HYPOTHETICAL GENE 24 PROTEIN ICTALURID HERPESVIRUS 1 7-72 74-108 (CHANNEL CATFISH VIRUS) (CCV) PVG28.sub.-- HSVI1 HYPOTHETICAL GENE 27 PROTEIN ICTALURID HERPESVIRUS 1 164-219 (CHANNEL CATFISH VIRUS) (CCV) PVG2R.sub.-- AMEPV HYPOTHETICAL GENE 28 PROTEIN ICTALURID HERPESVIRUS 1 253-290 (CHANNEL CATFISH VIRUS) (CCV) PVG2.sub.-- SPV1R HYPOTHETICAL G2R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 29-63 184-218 PVG2.sub.-- SPV4 GENE 2 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 222-256 285-326 PVG33.sub.-- HSVI1 GENE 2 PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 255-310 PVG34.sub.-- HSVI1 HYPOTHETICAL GENE 33 PROTEIN ICTALURID HERPESVIRUS 1 149-183 (CHANNEL CATFISH VIRUS) (CCV) PVG35.sub.-- HSVI1 HYPOTHETICAL GENE 34 PROTEIN ICTALURID HERPESVIRUS 1 345-379 (CHANNEL CATFISH VIRUS) (CCV) PVG37.sub.-- HSVI1 HYPOTHETICAL GENE 35 PROTEIN ICTALURID HERPESVIRUS 1 17-90 (CHANNEL CATFISH VIRUS) (CCV) PVG38.sub.-- HSVI1 HYPOTHETICAL GENE 37 PROTEIN ICTALURID HERPESVIRUS 1 435-472 (CHANNEL CATFISH VIRUS) (CCV) PVG39.sub.-- HSVI1 HYPOTHETICAL GENE 38 PROTEIN ICTALURID HERPESVIRUS 1 84-118 (CHANNEL CATFISH VIRUS) (CCV) PVG3.sub.-- SPV1R HYPOTHETICAL GENE 39 PROTEIN ICTALURID HERPESVIRUS 1 124-158 266-300 (CHANNEL CATFISH VIRUS) (CCV) PVG3.sub.-- SPV4 GENE 3 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 8-49 162-196 203-244 PVG43.sub.-- HSVI1 GENE 3 PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 6-54 87-121 PVG45.sub.-- HSVSA HYPOTHETICAL GENE 43 PROTEIN ICTALURID HERPESVIRUS 1 116-150 262-296 324-361 643-677 (CHANNEL CATFISH VIRUS) (CCV) PVG46.sub.-- HSVI1 HYPOTHETICAL GENE 45 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 121-162 PVG48.sub.-- HSVI1 PROBABLE MAJOR GLYCOPROTEIN ICTALURID HERPESVIRUS 1 45-86 939- 1251- (CHANNEL CATFISH VIRUS) (CCV) 1078 1321 PVG48.sub.-- HSVSA HYPOTHETICAL GENE 48 PROTEIN ICTALURID HERPESVIRUS 1 169-207 (CHANNEL CATFISH VIRUS) (CCV) PVG49.sub.-- HSVSA HYPOTHETICAL GENE 48 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 360-417 611-666 733-767 PVG4R.sub.-- AMEPV HYPOTHETICAL GENE 49 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 68-102 PVG4.sub.-- SPV4 G4R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 4-38 PVG51.sub.-- HSVI1 GENE 4 PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 89-130 PVG51.sub.-- HSVSA HYPOTHETICAL GENE 51 MEMBRANE ICTALURID HERPESVIRUS 1 34-73 89-123 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG53.sub.-- HSVI1 GENE 51 GLYCOPROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 29-70 123-157 162-196 PVG54.sub.-- HSVI1 HYPOTHETICAL GENE 53 PROTEIN ICTALURID HERPESVIRUS 1 67-127 (CHANNEL CATFISH VIRUS) (CCV) PVG55.sub.-- HSVI1 HYPOTHETICAL GENE 54 PROTEIN ICTALURID HERPESVIRUS 1 355-396 (CHANNEL CATFISH VIRUS) (CCV) PVG55.sub.-- HSVSA HYPOTHETICAL GENE 55 PROTEIN ICTALURID HERPESVIRUS 1 101-135 (CHANNEL CATFISH VIRUS) (CCV) PVG56.sub.-- HSVI1 HYPOTHETICAL GENE 55 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 126-178 PVG59.sub.-- HSVI1 HYPOTHETICAL GENE 56 PROTEIN ICTALURID HERPESVIRUS 1 151-192 578-612 644-678 750-784 846-880 1111- (CHANNEL CATFISH VIRUS) (CCV) 1145 PVG59.sub.-- HSVSA HYPOTHETICAL GENE 59 MEMBRANE ICTALURID HERPESVIRUS 1 10-72 89-123 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG5.sub.-- SPV1R GENE 59 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 169-209 PVG61.sub.-- HSVI1 GENE 5 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 65-103 PVG63.sub.-- HSVI1 HYPOTHETICAL GENE 61 PROTEIN ICTALURID HERPESVIRUS 1 265-299 (CHANNEL CATFISH VIRUS) (CCV) PVG65.sub.-- HSVI1 HYPOTHETICAL GENE 63 PROTEIN ICTALURID HERPESVIRUS 1 546-584 (CHANNEL CATFISH VIRUS) (CCV) PVG66.sub.-- HSVI1 HYPOTHETICAL GENE 65 PROTEIN ICTALURID HERPESVIRUS 1 805-839 1213- (CHANNEL CATFISH VIRUS) (CCV) 1254 PVG67.sub.-- HSVI1 HYPOTHETICAL GENE 66 PROTEIN ICTALURID HERPESVIRUS 1 154-188 328-410 (CHANNEL CATFISH VIRUS) (CCV) PVG68.sub.-- HSVI1 HYPOTHETICAL GENE 67 PROTEIN ICTALURID HERPESVIRUS 1 379-413 501-546 1321- 1478- (CHANNEL CATFISH VIRUS) (CCV) 1369 1541 PVG72.sub.-- HSVI1 HYPOTHETICAL GENE 68 PROTEIN ICTALURID HERPESVIRUS 1 245-288 (CHANNEL CATFISH VIRUS) (CCV) PVG75.sub.-- HSVI1 HYPOTHETICAL GENE 72 PROTEIN ICTALURID HERPESVIRUS 1 447-484 723-757 912-949 (CHANNEL CATFISH VIRUS) (CCV) PVG8.sub.-- SPV1R HYPOTHETICAL GENE 75 PROTEIN ICTALURID HERPESVIRUS 1 217-305 388-422 (CHANNEL CATFISH VIRUS) (CCV) PVGF1.sub.-- 1BVB GENE 8 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 5-51 PVGH3.sub.-- HCMVA F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 142-179 1233- 2119- 3388- 3475- 3517- 3761- (STRAIN BEAUDETTE) (I 1267 2156 3424 3513 3556 3795 PVGL1.sub.-- CVPR8 GLYCOPROTEIN H301 PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) PVGL2.sub.-- CVBF E1 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 212-257 (MATRIX GLYCOP (STRAIN 86/137004/BRI PVGL2.sub.-- CVBL9 E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN F15 642-676 850-885 993- 1263- (SPIKE GLYCOPRO 1088 1305 PVGL2.sub.-- CVBLY E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN L9) 850-885 993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2.sub.-- CVBM E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138) 642-676 850-885 993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2.sub.-- CVBQ E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS 642-676 850-885 993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2.sub.-- CVBV E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN QUEBEC) 642-676 850-885 993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2.sub.-- CVH22 E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN VACCINE) 642-676 850-885 993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2.sub.-- CVM4 E2 GLYCOPROTEIN PRECURSOR HUMAN CORONAVIRUS (STRAIN 229E) 770-916 1055- (SPIKE GLYCOPRO 1112 PVGL2.sub.-- CVMA5 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 643-684 1001- 1270- (SPIKE GLYCOPRO (STRAIN WILD TYPE 4) (MHV-4) 1117 1315 PVGL2.sub.-- CVMJC E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 591-632 949- 1218- (SPIKE GLYCOPRO (STRAIN A59) 1079 1263 PVGL2.sub.-- CVMJH E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 643-684 1001- 1270- (SPIKE GLYCOPRO (STRAIN JHMV/VARIANT CL-2) 1117 1315 PVGL2.sub.-- CVPFS E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 503-543 860-976 1129- (SPIKE GLYCOPRO (STRAIN JHM) 1174 PVGL2.sub.-- CVPMI E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 448-482 692-733 889-923 1040- 1352- (SPIKE GLYCOPRO CORONAVIRUS (S 1186 1389 PVGL2.sub.-- CVPPR E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 448-482 692-733 889-923 1040- 1352- (SPIKE GLYCOPRO CORONAVIRUS (S 1186 1389 PVGL2.sub.-- CVPPU E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 70-110 446-480 690-731 887-921 1038- 1350- (SPIKE GLYCOPRO CORONAVIRUS (S 1184 1387 PVGL2.sub.-- CVPR8 E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 446-480 690-731 887-921 1038- 1350- (SPIKE GLYCOPRO CORONAVIRUS (S 1184 1387 PVGL2.sub.-- CVPRM E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 224-258 468-509 665-699 816-962 1128- (SPIKE GLYCOPRO (STRAIN 86/1370004/BRIT 1165 PVGL2.sub.-- CVPRT E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 224-258 468-509 665-699 816-962 1128- (SPIKE GLYCOPRO (STRAIN RM4) (PRCV) 1165 PVGL2.sub.-- EBV E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 446-480 690-731 887-921 1038- 1350- (SPIKE GLYCOPRO CORONAVIRUS (S 1184 1387 PVGL2.sub.-- FIPV PROBABLE MEMBRANE GLYCOPROTEIN 68-102 PVGL2.sub.-- IBV6 E2 GLYCOPROTEIN PRECURSOR FELINE INFECTIOUS PERITONITIS VIRUS 189-245 451-485 695-736 892-926 1043- 1355- (STRAIN 79-1146) 1189 1392 PVGL2.sub.-- IBVB E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 791-905 1057- (STRAIN 6/82) 1091 PVGL2.sub.-- IBVD2 E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 437-478 772-904 1056- (STRAIN BEAUDETTE) 1090 PVGL2.sub.-- IBVK E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 773-905 1057- (STRAIN D274) 1091 PVGL2.sub.-- IBVM E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 437-478 772-904 1056- (STRAIN KB8523) 1090 PVGLB.sub.-- HCMVA E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 437-478 772-904 1056- (STRAIN M41) 1090 PVGLB.sub.-- HCMVT GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 43-88 128-162 436-484 844-878 PVGLB.sub.-- HSV11 GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 22-88 128-162 437-478 451-485 845-879 PVGLB.sub.-- HSV1F GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 828-890 PVGLB.sub.-- HSV1K GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F)] 827-889 PVGLB.sub.-- HSV1P GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 827-889 PVGLB.sub.-- HSV23 GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS 828-890 (TYPE 1/STRAIN PATTON) PVGLB.sub.-- HSV2H GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333) 828-890 PVGLB.sub.-- HSV2S GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 828-890 PVGLB.sub.-- HSV6U GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN SA8) 817-871 PVGLB.sub.-- HSVB1 GLYCOPROTEIN B HERPES SIMPLEX VIRUS 37-71 185-223 (TYPE 6/STRAIN UGANDA-1102) PVGLB.sub.-- HSVB2 GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 859-913 PVGLB.sub.-- HSVBC GLYCOPROTEIN B-1 PRECURSOR BOVINE HERPESVIRUS TYPE 2 (STRAIN BMV) 440-474 848-902 PVGLB.sub.-- HSVE1 GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN COOPER) 863-900 PVGLB.sub.-- HSVE4 GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (ISOLATE HVS25A) 542-576 911-961 PVGLB.sub.-- HSVEA GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 474-515 847-900 PVGLB.sub.-- HSVEB GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB1) 542-576 911-961 PVGLB.sub.-- HSVEL GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 542-576 911-961 PVGLB.sub.-- HSVMD GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 542-576 910-960 (STRAIN KENTUCKY D) PVGLB.sub.-- HSVSA GLYCOPROTEIN B PRECURSOR MAREK'S DISEASE HERPESVIRUS 390-435 649-683 787-845 (STRAIN RB-1B) PVGLB.sub.-- MCMVS GLYCOPROTEIN B PRECURSOR HERPESVIRUS SAIMIRI (STRAIN 11) 240-288 406-447 PVGLB.sub.-- PRVIF GLYCOPROTEIN B PRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 206-260 427-475 693-734 744-778 860-894 PVGLB.sub.-- VZVD GLYCOPROTEIN GII PRECURSOR PSEUDORABIES VIRUS 847-881 (STRAIN INDIANA-FUNKHAUSER/BECKE PVGLC.sub.-- HSV11 GLYCOPROTEIN B PRECURSOR VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 92-133 596-630 809-867 PVGLC.sub.-- HSV1K GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 469-510 PVGLC.sub.-- HSV2 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 469-510 PVGLC.sub.-- HSV23 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2) 442-476 PVGLC.sub.-- HSVBC GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333) 443-477 PVGLC.sub.-- HSVEB GLYCOPROTEIN GIII PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN COOPER) 235-269 PVGLC.sub.-- HSVMB GLYCOPROTEIN C PRECURSOR EQUINE HERPESVIRUS TYPE 1 182-218 (STRAIN AB4P) AND (STRAIN KEN PVGLC.sub.-- HSVMD SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS 63-97 PRECURSOR (STRAIN BC-1) PVGLC.sub.-- HSVMG SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS 63-97 PRECURSOR (STRAIN RB-1B) PVGLC.sub.-- HSVMM SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS 62-96 PRECURSOR (STRAIN GA) PVGLC.sub.-- PRVIF SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS 63-97 PRECURSOR (STRAIN MD5) PVGLC.sub.-- VZVD GLYCOPROTEIN G111 PRECURSOR PSEUDORABIES VIRUS 183-235 (STRAIN INDIANA-FUNKHAUSER/BECKE PVGLC.sub.-- VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 280-321 PVGLD.sub.-- HSVEA GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN SCOTT) 280-321 PVGLD.sub.-- HSVEB GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 89-123 (STRAIN AB1) PVGLD.sub.-- HSVEK GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 139-173 (STRAIN AB4P) AND (STRAIN KEN PVGLE.sub.-- HSV11 GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 139-173 (STRAIN KENTUCKY A) PVGLE.sub.-- HSV2 GLYCOPROTEIN E PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 111-145 PVGLF.sub.-- BRSVA GLYCOPROTEIN E PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2) 111-159 PVGLF.sub.-- BRSVC FUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIAL VIRUS 146-202 504-545 (STRAIN A51908) PVGLF.sub.-- BRSVR FUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIAL VIRUS 146-202 267-302 506-547 (STRAIN COPENHAGE PVGLF.sub.-- CDVO FUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIAL VIRUS 146-202 267-302 506-554 (STRAIN RB94) PVGLF.sub.-- HRSV1 FUSION GLYCOPROTEIN PRECURSOR CANINE DISTEMPER VIRUS 228-297 340-381 568-602 (STRAIN ONDERSTEPOORT) PVGLF.sub.-- HRSVA FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 116-203 267-302 506-549 (SUBGROUP B/STRAI PVGLF.sub.-- HRSVL FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 116-202 267-302 506-549 (STRAIN A2 PVGLF.sub.-- HRSVR FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 116-202 267-302 506-547 (SUBGROUP A/STRAI PVGLF.sub.-- MEASE FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 116-202 267-302 506-549 (STRAIN RSS-2) PVGLF.sub.-- MEASI FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS 116-184 228-269 452-500 (STRAIN EDMONSTON) AND (STRAIN HALLE) PVGLF.sub.-- MEASY FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS (STRAIN IP-3-CA) 119-187 231-272 455-503 PVGLF.sub.-- MUMP1 FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS (STRAIN YAMAGATA-1) 116-184 228-269 452-500 PVGLF.sub.-- MUMPM FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN SBL-1) 20-54 103-179 235-272 447-502 PVGLF.sub.-- MUMPR FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 20-54 103-179 235-272 447-502 PVGLF.sub.-- MUMPS FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN RW) 20-54 103-179 235-272 447-502 PVGLF.sub.-- NDVA FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN SBL) 20-54 103-179 235-272 447-502 PVGLF.sub.-- NDVB FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-512 (STRAIN AUSTRALIA-VICTORIA/32) PVGLF.sub.-- NDVH3 FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 426-517 (STRAIN BEAUDETTE C/45) PVGLF.sub.-- NDVH4 FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-517 (STRAIN HER/33) PVGLF.sub.-- NDVI FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 426-517 (STRAIN B1-HITCHNER/47) PVGLF.sub.-- NDVL FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 133-182 238-272 426-517 (STRAIN ITALIEN/45) PVGLF.sub.-- NDVM FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 133-182 231-272 426-517 (STRAIN LAS/46) PVGLF.sub.-- NDVQ FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-512 (STRAIN MIYADERA/51) PVGLF.sub.-- NDVT FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 433-512 (STRAIN QUEENSLAND/66) PVGLF.sub.-- NDVTG FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-517 (STRAIN TEXAS) PVGLF.sub.-- NDVU FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 426-517 (STRAIN TEXAS G.B./48) PVGLF.sub.-- PHODV FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272 426-512 (STRAIN ULSTER/67) PVGLF.sub.-- PI1HC FUSION GLYCOPROTEIN PRECURSOR PHOCINE DISTEMPER VIRUS 29-63 197-266 309-350 533-581 PVGLF.sub.-- PI2H FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 1 VIRUS 123-174 207-267 459-503 (STRAIN C39) PVGLF.sub.-- PI2HG FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 2 VIRUS 93-183 477-528 PVGLF.sub.-- PI2HT FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 2 VIRUS 93-183 477-528 (STRAIN GREER) PVGLF.sub.-- PI3B FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 2 VIRUS 93-185 477-528 (STRAIN TOSHIBA) PVGLF.sub.-- PI3H4 FUSION GLYCOPROTEIN PRECURSOR BOVINE PARAINFLUENZA 3 VIRUS 117-182 207-241 456-518 PVGLF.sub.-- RINDK FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 3 VIRUS 117-182 207-241 462-532 (STRAIN NIH 47885) PVGLF.sub.-- RINDL FUSION GLYCOPROTEIN PRECURSOR RINDERPEST VIRUS 112-180 224-265 448-493 (STRAIN KABETE O) PVGLF.sub.-- SEND5 FUSION GLYCOPROTEIN PRECURSOR RINDERPEST VIRUS 112-180 224-265 448-506 (STRAIN L) PVGLF.sub.-- SENDF FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 127-188 211-271 463-533 PVGLF.sub.-- SENDH FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN FUSHIMI) 127-188 211-271 463-533 PVGLF.sub.-- SENDJ FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN HARRIS) 127-188 218-271 463-533 PVGLF.sub.-- SENDZ FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN HVJ) 177-188 211-271 463-533 PVGLF.sub.-- SV41 FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN Z) 127-188 211-271 463-533 PVGLF.sub.-- SV5 FUSION GLYCOPROTEIN PRECURSOR SIMIAN VIRUS 41 96-186 454-508 PVGLF.sub.-- TRTV FUSION GLYCOPROTEIN PRECURSOR SIMIAN VIRUS (STRAIN W3) 103-171 241-275 451-487 PVGLG.sub.-- BEFV FUSION GLYCOPROTEIN PRECURSOR TURKEY RHINOTRACHEITIS VIRUS ( 105-161 190-224 457-498 PVGLG.sub.-- BRSVC SPIKE GLYCOPROTEIN PRECURSOR BOVINE EPHEMERAL FEVER VIRUS 506-612 PVGLG.sub.-- HRSV1 MAJOR SURFACE GLYCOPROTEIN G BOVINE RESPIRATORY SYNCYTIAL VIRUS 30-70 104-138 (STRAIN COPENHAGE PVGLG.sub.-- HRSV2 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-81 (SUBGROUP B/STRAI PVGLG.sub.-- HRSV3 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB642 PVGLG.sub.-- HRSV4 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB1734 PVGLG.sub.-- HRSV5 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-107 (STRAIN RSB5857) PVGLG.sub.-- HRSV6 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB6190) PVGLG.sub.-- HRSV7 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB6256) PVGLG.sub.-- HRSV8 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB6614) PVGLG.sub.-- HRSVA MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-81 (SUBGROUP B/STRAI PVGLG.sub.-- HRSVL MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-67 (STRAIN A2) PVGLG.sub.-- HSVE4 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 25-85 (SUBGROUP A/STRAI PVGLG.sub.-- SIGMA GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 271-305 PVGLG.sub.-- SYNV SPIKE GLYCOPROTEIN PRECURSOR SIGMA VIRUS 344-381 464-498 PVGLG.sub.-- VHSV0 SPIKE GLYCOPROTEIN PRECURSOR SONCHUS YELLOW NET VIRUS 488-523 PVGLG.sub.-- VSVIG SPIKE GLYCOPROTEIN PRECURSOR VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 363-397 (STRAIN 07-71) PVGLH.sub.-- EBV SPIKE GLYCOPROTEIN PRECURSOR VESICULAR STOMATITIS VIRUS 476-510 (SEROTYPE INDIANA/STRAIN G PVGLH.sub.-- HCMVA GLYCOPROTEIN GP85 PRECURSOR EPSTEIN-BARR VIRUS (STRAIN B95-8) 53-87 160-201 336-380 653-694 PVGLH.sub.-- HCMVT GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 103-137 270-311 693-741 PVGLH.sub.-- HSV11 GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 102-136 692-740 PVGLH.sub.-- HSV1E GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 447-481 PVGLH.sub.-- HSV6G GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN HFEM) 447-481 PVGLH.sub.-- HSVBC GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 357-406 PVGLH.sub.-- HSVE4 GLYCOPROTEIN H PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN COOPER) 364-416 PVGLH.sub.-- HSVEB GLYCOPROTEIN H PRECURSOR EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 334-379 414-455 PVGLH.sub.-- HSVSA GLYCOPROTEIN H PRECURSOR EQUINE HERPESVIRUS TYPE 1 327-372 407-448 (STRAIN AB4P) AND (ISOLATE HV PVGLH.sub.-- MCMVS GLYCOPROTEIN H PRECURSOR HERPESVIRUS SAIMIRI (STRAIN 11) 32-66 374-453 664-712 PVGLH.sub.-- PRVKA GLYCOPROTEIN H PRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN SMITH 440-474 PVGLH.sub.-- PRVN3 GLYCOPROTEIN H PRECURSOR PSEUDORABIES VIRUS (STRAIN KAPLAN) 226-260 PVGLH.sub.-- PRVRI GLYCOPROTEIN H PRECURSOR PSEUDORABIES VIRUS (STRAIN NIA-3) 226-260 PVGLH.sub.-- VZVD GLYCOPROTEIN H PRECURSOR PSEUDORABIES VIRUS (STRAIN RICE) 226-260 PVGLI.sub.-- HCMVA PROBABLE GLYCOPROTEIN H PRECURSOR VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 455-506 PVGLM.sub.-- BUNGE IMMEDIATE EARLY GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 47-111 323-359 PRECURSOR PVGLM.sub.-- BUNL7 M POLYPROTEIN PRECURSOR BUNYAVIRUS GERMISTON 512-567 685-737 1228- 1262 PVGLM.sub.-- BUNSH M POLYPROTEIN PRECURSOR BUNYAVIRUS LA CROSSE (ISOLATE L74) 643-677 916-950 PVGLM.sub.-- BUNYW M POLYPROTEIN PRECURSOR BUNYAVIRUS SNOWSHOW HARE 643-677 PVGLM.sub.-- DUGBV M POLYPROTEIN PRECURSOR BUNYAMWERA VIRUS 340-374 504-563 905-939 PVGLM.sub.-- HANTB M POLYPROTEIN PRECURSOR DUGBE VIRUS 937-989 1239- 1300 PVGLM.sub.-- HANTH M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN B-1) 693-727 PVGLM.sub.-- HANTL M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN HOJO) 72-106 PVGLM.sub.-- HANTV M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN LEE) 72-106 PVGLM.sub.-- INSV M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN 76-118) 72-106 PVGLM.sub.-- PHV M POLYPROTEIN PRECURSOR IMPATIENS NECROTIC SPOT VIRUS 1067- 1101 PVGLM.sub.-- PTPV M POLYPROTEIN PRECURSOR PROSPECT HILL VIRUS 73-111 PVGLM.sub.-- SEOU8 M POLYPROTEIN PRECURSOR PUNTA TORO PHLEBOVIRUS 149-251 PVGLM.sub.-- SEOUR M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN 80-39) 693-727 PVGLM.sub.-- SEOUS M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN R22) 694-728 PVGLN.sub.-- BEFV M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN SR-11) 693-730 PVGLP.sub.-- BEV NONSTRUCTURAL GLYCOPROTEIN BOVINE EPHEMERAL FEVER VIRUS 377-414 513-569 GNS PRECURSO PVGLX.sub.-- PRVRI PEPLOMER GLYCOPROTEIN PRECURSOR BERNE VIRUS 43-82 90-124 622-656 1128- 1236 PVGLY.sub.-- JUNIN SECRETED GLYCOPROTEIN GX PSEUDORABIES VIRUS (STRAIN RICE) 420-461 PVGLY.sub.-- LASSG GLYCOPROTEIN POLYPROTEIN PRECURSOR JUNIN ARENAVIRUS 301-349 PVGLY.sub.-- LASSJ GLYCOPROTEIN POLYPROTEIN PRECURSOR LASSA VIRUS (STRAIN GA391) 317-360 388-422 PVGLY.sub.-- LYCVA GLYCOPROTEIN POLYPROTEIN PRECURSOR LASSA VIRUS (STRAIN JOSIAH) 318-361 389-423 PVGLY.sub.-- LYCVW GLYCOPROTEIN POLYPROTEIN PRECURSOR LYMPHOCYTIC CHORIOMENINGITIS VIRUS 333-367 395-432 (STRAIN ARMSTRON PVGLY.sub.-- MOPEI GLYCOPROTEIN POLYPROTEIN PRECURSOR LYMPHOCYTIC CHORIOMENINGITIS VIRUS 124-158 333-367 395-432 (STRAIN WE) PVGLY.sub.-- PIARV GLYCOPROTEIN POLYPROTEIN PRECURSOR MOPEIA VIRUS 316-359 PVGLY.sub.-- TACV GLYCOPROTEIN POLYPROTEIN PRECURSOR PICHINDE ARENAVIRUS 334-375 PVGLY.sub.-- TACV5 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS 315-363 PVGLY.sub.-- TACV7 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAIN V5) 303-351 382-416 PVGLY.sub.-- TACVT GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAIN V7) 302-350 381-415 PVGNB.sub.-- CPMV GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAIN TRVL 11598) 303-351 382-416 PVGNM.sub.-- CPMV GENOME POLYPROTEIN B COWPEA MOSAIC VIRUS 835-869 PVGNM.sub.-- CPSMV GENOME POLYPROTEIN M COWPEA MOSAIC VIRUS 160-201 PVGNM.sub.-- RCMV GENOME POLYPROTEIN M COWPEA SEVERE MOSAIC VIRUS (STRAIN DG) 192-226 758-792 874-915 PVGP8.sub.-- EBV GENOME POLYPROTEIN M RED CLOVER MOTTLE VIRUS 837-871 912-946 PVGP.sub.-- EBOV PROBABLE MEMBRANE ANTIGEN GP85 EPSTEIN-BARR VIRUS (STRAIN B95-8) 94-149 PVGP.sub.-- MABVM STRUCTURAL GLYCOPROTEIN PRECURSOR EBOLA VIRUS 280-321 334-368 469-503 PVGP.sub.-- MABVP STRUCTURAL GLYCOPROTEIN PRECURSOR MARBURG VIRUS (STRAIN MUSOKE) 562-596 PVH02.sub.-- VACCC STRUCTURAL GLYCOPROTEIN PRECURSOR MARBURG VIRUS (STRAIN POPP) 562-596 PVH02.sub.-- VACCV LATE PROTEIN H2 VACCINIA VIRUS (STRAIN COPENHAGEN) 58-92 PVH02.sub.-- VARV LATE PROTEIN H2 VACCINIA VIRUS (STRAIN WR) 58-94 PVH05.sub.-- VACCC LATE PROTEIN H2 VARIOLA VIRUS 58-92 PVH05.sub.-- VACCV PROTEIN H5 VACCINIA VIRUS (STRAIN COPENHAGEN) 118-185 PVH05.sub.-- VARV PROTEIN H5 VACCINIA VIRUS (STRAIN WR) 118-185 PVHEL.sub.-- LSV PROTEIN H5 VARIOLA VIRUS 136-203 PVHRP.sub.-- VACCC PROBABLE HELICASE LILY SYMPTOMLESS VIRUS 126-160 PVHRP.sub.-- VACCV HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 216-279 PVI03.sub.-- VACCC HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN WR) 216-279 PVI03.sub.-- VACCV PROTEIN I3 VACCINIA VIRUS (STRAIN COPENHAGEN) 150-193 210-244 PVI03.sub.-- VARV PROTEIN I3 VACCINIA VIRUS (STRAIN WR) 150-193 210-244 PVI06.sub.-- VACCV PROTEIN I3 VARIOLA VIRUS 150-193 210-244 PVI06.sub.-- VARV PROTEIN I6 VACCINIA VIRUS (STRAIN WR) 58-92 PVI07.sub.-- VARV PROTEIN I6 VARIOLA VIRUS 58-92 PVI08.sub.-- VACCC PROTEIN I7 VARIOLA VIRUS 373-407 PVI08.sub.-- VACCV PUTATIVE RNA HELICASE I8 VACCINIA VIRUS (STRAIN COPENHAGEN) 548-589 PVI08.sub.-- VARV PUTATIVE RNA HELICASE I8 VACCINIA VIRUS (STRAIN WR) 548-589 PVIE1.sub.-- HCMVA PUTATIVE RNA HELICASE I8 VARIOLA VIRUS 548-589 PVIE1.sub.-- HCMVT 55 KD IMMEDIATE-EARLY PROTEIN 1 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 78-112 171-205 368-402 416-450 PVIE1.sub.-- MCMVS 55 KD IMMEDIATE-EARLY PROTEIN 1 HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 78-112 171-205 368-402 416-450 PVIE2.sub.-- NPVOP IMMEDIATE-EARLY PROTEIN 1 MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 244-297 PVIEN.sub.-- NPVAC IMMEDIATE-EARLY PROTEIN IE-2 ORGYIA PSEUDOTSUGATA MULTICAPSID 94-128 305-395 POLYHEDRO SIS VIRUS PVIF.sub.-- CAEVC IMMEDIATE-EARLY REGULATORY AUTOGRAPHA CALIFORNICA NUCLEAR 277-407 PROTEIN IE-N POLYHEDROSIS VIRUS PVIF.sub.-- FIVPE VIRION INFECTIVITY FACTOR CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 23-92 (STRAIN CORK) PVIF.sub.-- FIVSD VIRION INFECTIVITY FACTOR FELINE IMMUNODEFICIENCY VIRUS 53-94 (ISOLATE PETALUMA) PVIF.sub.-- HC1A2 VIRION INFECTIVITY FACTOR FELINE IMMUNODEFICIENCY VIRUS 32-80 (ISOLATE SAN DIEGO) PVIF.sub.-- HV1B1 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (ARV2/SF2 ISOLATE PVIF.sub.-- HC1B5 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (BH10, BRU, HXB2, PV PVIF.sub.-- HV1EL VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (BHS ISOLATE) PVIF.sub.-- HV1JR VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (ELI ISOLATE) PVIF.sub.-- HV1MA VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (JRCSF ISOLATE) PVIF.sub.-- HV1MN VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 2-36 (MAL ISOLATE) PVIF.sub.-- HV1N5 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (MN ISOLATE) PVIF.sub.-- HV1NA VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (NEW YORK-5 ISOL PVIF.sub.-- HVIND VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (ISOLATE NIT-A) PVIF.sub.-- HV1OY VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (NDK ISOLATE) PVIF.sub.-- HV1RH VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (OYI ISOLATE) PVIF.sub.-- HV1U4 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (RF/HAT ISOLATE) PVIF.sub.-- HV1Z2 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 (STRAIN UGANDAN PVIF.sub.-- HV1Z6 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (Z2/CDC-Z3 4 ISOLAT PVIF.sub.-- HV2D2 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (ZAIRE 6 ISOLATE) PVIF.sub.-- HV2NZ VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 147-195 (ISOLATE D205,7) PVIF.sub.-- HV2RO VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 152-193 (ISOLATE NIH-Z) PVIF.sub.-- OMVVS VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 163-197 (ISOLATE ROD) PVIF.sub.-- SIVAI VIRION INFECTIVITY FACTOR OVINE LENTIVIRUS (STRAIN SA-OMVV) 44-114 PVIF.sub.-- SIVAG VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 2-58 150-202 (AGM155 ISOLATE) PVIF.sub.-- SIVA1 VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 17-58 (AGM3 ISOLATE) PVIF.sub.-- SIVAT VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 2-36 143-187 (ISOLATE AGM/CLONE GR1 PVIF.sub.-- SIVCZ VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 20-58 150-195 (TYO-1 ISOLATE) PVIF.sub.-- SIVGB VIRION INFECTIVITY FACTOR CHIMPANZEE IMMUNODEFICIENCY VIRUS 1-42 PVIMP.sub.-- HSV11 VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 1-39 (ISOLATE GB1) PVIMP.sub.-- HSVEB PROBABLE INTEGRAL MEMBRANE PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 85-134 PVIMP.sub.-- HSVSA PROBABLE INTEGRAL MEMBRANE PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 148-182 335-369 PVIMP.sub.-- VZVD INTEGRAL MEMBRANE PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 80-129 PVINT.sub.- - SSV1 PROBABLE INTEGRAL MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 107-151 155-189 267-301 PVJ01.sub.-- VACCC PROBABLE INTEGRASE SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 85-130 138-172 PVJ01.sub.-- VACCV PROTEIN J1 VACCINIA VIRUS (STRAIN COPENHAGEN) 22-56 PVJ01.sub.-- VARV PROTEIN J1 VACCINIA VIRUS (STRAIN WR) 22-56 PVK03.sub.-- VACCC PROTEIN J1 VARIOLA VIRUS 22-56 PVK03.sub.-- VACCV PROTEIN K3 VACCINIA VIRUS (STRAIN COPENHAGEN) 38-82 PVK07.sub.-- VACCV PROTEIN K3 VACCINIA VIRUS (STRAIN WR) 38-82 PVL02.sub.-- VACCC PROTEIN K7 VACCINIA VIRUS 115-149 (STRAIN WR), AND (STRAIN COPENHAGEN) PVL02.sub.-- VACCV PROTEIN L2 VACCINIA VIRUS (STRAIN COPENHAGEN) 47-81 PVL02.sub.-- VARV PROTEIN L2 VACCINIA VIRUS (STRAIN WR) 47-92 PVL1.sub.-- CRPVK PROTEIN L2 VARIOLA VIRUS 47-81 PVL1.sub.-- FPVL PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) 261-295 331-383 PAPILLOMAVIRUS (STRAIN KANS PVL1.sub.-- HPV05 PROBABLE L1 PROTEIN AVIAN PAPILLOMAVIRUS FPV-L 38-90 PVL1.sub.-- HPV08 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 355-393 PVL1.sub.-- HPV1A PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 354-392 PVL1.sub.-- HPV47 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 345-379 PVL1.sub.-- PAPVD PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 353-391 PVL1.sub.-- REOVD PROBABLE L1 PROTEIN DEER PAPILLOMAVIRUS 23-57 PVL2.sub.-- HPV05 MAJOR CORE PROTEIN LAMBDA 1 REOVIRUS (TYPE 3/STRAIN DEARING) 94-142 437-471 PVL2.sub.-- HPV08 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 341-375 PVL2.sub.-- HPV16 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 354-392 PVL2.sub.-- HPV1A PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16 295-333 PVL2.sub.-- HPV31 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 345-379 PVL2.sub.-- HPV35 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 288-326 PVL2.sub.-- HPV47 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 292-333 PVL2.sub.-- HPV58 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 341-375 PVL2.sub.-- HPV5B PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 293-327 PVL3.sub.-- REOVD PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 341-375 PVL3.sub.-- REOVJ MINOR CORE PROTEIN LAMBDA 3 REOVIRUS (TYPE 3/STRAIN DEARING) 107-148 1112- 1178 PVL3.sub.-- REOVL MINOR CORE PROTEIN LAMBDA 3 REOVIRUS (TYPE 2/STRAIN D5/JONES) 1112- 1178 PVL96.sub.-- IRV1 MINOR CORE PROTEIN LAMBDA 3 REOVIRUS (TYPE 1/STRAIN LANG) 107-148 331-365 1112- 1178 PVM01.sub.-- VACCC L96 PROTEIN TIPULA IRIDESCENT VIRUS 146-180 198-236 PVM1.sub.-- REOVL PROTEIN M1 VACCINIA VIRUS (STRAIN COPENHAGEN) 5-56 PVM21.sub.-- REOVD MINOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 287-321 PROTEIN MU-2 PVM22.sub.-- REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING) 416-450 619-663 PROTEIN MU-1/MU-1C PVM2.sub.-- REOVJ MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING) 416-450 618-662 PROTEIN MU-1/MU-1C PVM2.sub.-- REOVL MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 2/STRAIN D5/JONES) 416-450 618-662 PROTEIN MU-1/MU-1C PVM3.sub.-- REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 416-450 618-662 PROTEIN MU-1/MU-1C PVMA2.sub.-- BRSVA MAJOR NONSTRUCTURAL PROTEIN MU-NS REOVIRUS (TYPE 3/STRAIN DEARING) 135-190 337-371 523-558 618-690 PVMA2.sub.-- HRSVA MATRIX GLYCOPROTEIN M2 BOVINE RESPIRATORY SYNCYTIAL VIRUS 42-90 (STRAIN A51908) PVMA2.sub.-- TRTV MATRIX GLYCOPROTEIN M2 HUMAN RESPIRATORY SYNCYTIAL VIRUS 42-90 (STRAIN A2) PVMAT.sub.-- CDVO MATRIX GLYCOPROTEIN M2 TURKEY RHINOTRACHEITIS VIRUS 36-70 PVMAT.sub.-- INCJJ MATRIX PROTEIN CANINE DISTEMPER VIRUS 193-234 (STRAIN ONDERSTEPOORT) PVMAT.sub.-- NDVA MATRIX (M) PROTEIN INFLUENZA C VIRUS (STRAIN C/JJ/50) 73-114 151-208 PVMAT.sub.-- NDVB MATRIX PROTEIN NEWCASTLE DISEASE VIRUS 310-358 (STRAIN AUSTRALIA-VICTORIA/32) PVMAT.sub.-- PI3B MATRIX PROTEIN NEWCASTLE DISEASE VIRUS 324-358 (STRAIN BEAUDETTE C/45) PVMAT.sub.-- PI3H4 MATRIX PROTEIN BOVINE PARAINFLUENZA 3 VIRUS 99-133 204-252 PVMAT.sub.-- RABVA MATRIX PROTEIN HUMAN PARAINFLUENZA 3 VIRUS 99-133 204-252 (STRAIN NIH 47885) PVMAT.sub.-- RABVC MATRIX PROTEIN RABIES VIRUS (STRAIN AVO1) 69-103 PVMAT.sub.-- RABVE MATRIX PROTEIN RABIES VIRUS (STRAIN CVS-11) 69-103 PVMAT.sub.-- RABVN MATRIX PROTEIN RABIES VIRUS (STRAIN ERA) 69-103 PVMAT.sub.-- RABVP MATRIX PROTEIN RABIES VIRUS (STRAIN NISHIGAHARA RCEH) 69-103 PVMAT.sub.-- RABVS MATRIX PROTEIN RABIES VIRUS (STRAIN PV) 69-103 PVMAT.sub.-- SYNV MATRIX PROTEIN RABIES VIRUS (STRAIN SAD B19) 69-103 PVMAT.sub.-- VSVIG MATRIX PROTEIN SONCHUS YELLOW NET VIRUS 246-280 PVME1.sub.-- CVBM MATRIX PROTEIN VESICULAR STOMATITIS VIRUS 198-232 (SEROTYPE INDIANA/STRAIN G PVME1.sub.-- CVPFS E1 GLYCOPROTEIN BOVINE CORONAVIRUS (STRAIN MEBUS) 175-209 PVME1.sub.-- CVPPU E1 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 98-146 212-257 CORONAVIRUS (S PVME1.sub.-- CVPRM E1 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 212-257 CORONAVIRUS (S PVME1.sub.-- CVTKE E1 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 212-257 (STRAIN RM4) PVME1.sub.-- FIPV E1 GLYCOPROTEIN TURKEY ENTERIC CORONAVIRUS 28-62 175-209 PVME1.sub.-- IBV6 E1 GLYCOPROTEIN PRECURSOR FELINE INFECTIOUS PERITONITIS VIRUS 212-257 (STRAIN 79-1146) PVME1.sub.-- IBVB E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-55 177-218 (STRAIN 6/82) PVME1.sub.-- IBVB2 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-55 177-218 (STRAIN BEAUDETTE) PVME1.sub.-- IBVK E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-55 177-218 (STRAIN BEAUDETTE M4 PVMEM.sub.-- EBV E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 177-218 (STRAIN KB8523) PVMP.sub.-- CAMVC PROBABLE MEMBRANE PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 36-94 PVMP.sub.-- CAMVD MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN CM-1841) PVMP.sub.-- CAMVE MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN D/H) PVMP.sub.-- CAMVN MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN BBC) PVMP.sub.-- CAMVS MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN NY8153) PVMP.sub.-- CAMVW MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN STRASBOURG) PVMP.sub.-- CERV MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN W260) PVMP.sub.-- FMVD MOVEMENT PROTEIN CARNATION ETCHED RING VIRUS 212-246 PVMP.sub.-- SOCMV MOVEMENT PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 217-251 PVMSA.sub.-- HPBDB MOVEMENT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 76-118 PVMSA.sub.-- HPBDC MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS 272-313 324-361 (BROWN SHANGHAI DUCK ISOLATE S PVMSA.sub.-- HPBDU MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS 271-312 323-360 (STRAIN CHINA) PVMSA.sub.-- HPBDW MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS 234-275 289-323 PVMSA.sub.-- HPBGS MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS 272-313 324-361 (WHITE SHANGHAI DUCK ISOLATE S3 PVMSA.sub.-- HPBHE MAJOR SURFACE ANTIGEN PRECURSOR GROUND SQUIRREL HEPATITIS VIRUS 210-244 PVMSA.sub.-- WHV1 MAJOR SURFACE ANTIGEN PRECURSOR HERON HEPATITIS B VIRUS 294-328 PVMSA.sub.-- WHV59 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITIS VIRUS 1 208-242 PVMSA.sub.-- WHV7 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITIS VIRUS 59 213-247 PVMSA.sub.-- WHV81 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITIS VIRUS 7 213-247 PVMT1.sub.-- DHVI1 PROBABLE MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8 213-247 PRECURSOR (INFECTIOUS CLONE) PVMT1.sub.-- IAANN MATRIX PROTEIN 1 DHORI VIRUS (STRAIN INDIAN/1313/61) 201-235 PVMT1.sub.-- IABAN MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/ANN ARBOR/6/60) PVMT1.sub.-- IACAO MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/BANGKOK/1/79) PVMT1.sub.-- IAFOW MATRIX (M1) PROTEIN INFLUENZA A VIRUS 31-79 (STRAIN A/CAMEL/MONGOLIA/82) PVMT1.sub.-- IAFPR MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/FORT WARREN/1/50), AND (STR PVMT1.sub.-- IAFPW MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PVMT1.sub.-- IALE1 MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/FOWL PLAGUE VIRUS/WEYBRID PVMT1.sub.-- IALE2 MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/LENINGRAD/134/57) PVMT1.sub.-- IAMAN MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/LENINGRAD/134/17/57) PVMT1.sub.-- IAPOC MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/MALLARD/NEW YORK/6750/78) PVMT1.sub.-- IAPUE MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/PORT CHALMERS/1/73) PVMT1.sub.-- IAUDO MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/PUERTO RICO/8/34) PVMT1.sub.-- IAW1L MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/UDORN/307/72) PVMT1.sub.-- IAZI1 MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/WILSON-SMITH/33 PVMT1.sub.-- INBAC MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/SWINE/IOWA/15/30 PVMT1.sub.-- INBAD MATRIX (M1) PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PVMT1.sub.-- INBLE MATRIX (M1) PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PVMT1.sub.-- INBSI MATRIX (M1) PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/LEE/40) PVMT2.sub.-- INBAC MATRIX (M1) PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/SINGAPORE/222/79) PVMT2.sub.-- INBAD PROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PVMT2.sub.-- INBLE PROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PVMT2.sub.-- INBSI PROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184 (STRAIN B/LEE/40) PVMT8.sub.-- MYXVL PROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184 (STRAIN B/SINGAPORE/222/79) PVN01.sub.-- VACCC M-T8 PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE) 46-80 145-197 PVN01.sub.-- VACCV PROTEIN N1 VACCINIA VIRUS (STRAIN COPENHAGEN) 64-112 PVN34.sub.-- ROTBS PROTEIN N1 VACCINIA VIRUS (STRAIN WR) 64-112 PVN34.sub.-- ROTPC NONSTRUCTURAL PROTEIN NS34 BOVINE ROTAVIRUS 64-169 (GROUP C/STRAIN SHINTOKU) PVNCA.sub.-- AAV2 NONSTRUCTURAL PROTEIN NS34 PORCINE ROTAVIRUS 64-117 121-169 (GROUP C/STRAIN COWDEN) PVNCA.sub.-- RSV DNA REPLICATION PROTEIN ADENO-ASSOCIATED VIRUS 2 91-125 217-251 PVNCN.sub.-- PAVBO MAJOR NONCAPSID PROTEIN RICE STRIPE VIRUS 129-163 PVNCS.sub.-- ADVG PROBABLE NONCAPSID PROTEIN NP1 BOVINE PARVOVIRUS 221-255 PVNCS.sub.-- AEDEV NONCAPSID PROTEIN NS-1 ALEUTIAN MINK DISEASE PARVOVIRUS 19-60 270-304 (STRAIN G) PVNCS.sub.-- FPV19 NONCAPSID PROTEIN NS-1 AEDES DENSONUCLEOSIS VIRUS 276-339 521-571 585-640 715-760 780-849 (STRAIN GKV 002 002) PVNCS.sub.-- MEVA NONCAPSID PROTEIN NS-1 FELINE PANLEUKOPENIA VIRUS 53-98 (STRAIN 193) PVNCS.sub.-- MUMIM NONCAPSID PROTEIN NS-1 MINK ENTERITIS VIRUS 53-98 (STRAIN ABASHIRI) PVNCS.sub.-- MUMIV NONCAPSID PROTEIN NS-1 MURINE MINUTE VIRUS (STRAIN MVMI) 35-91 261-297 PVNCS.sub.-- PAVBO NONCAPSID PROTEIN NS-1 MURINE MINUTE VIRUS 35-87 259-297 PVNCS.sub.-- PAVCN PROBABLE NONCAPSID PROTEIN NS1 BOVINE PARVOVIRUS 181-222 PVNCS.sub.-- PAVHB NONCAPSID PROTEIN NS-1 CANINE PARVOVIRUS (STRAIN N) 53-98 PVNCS.sub.-- PAVHH NONCAPSID PROTEIN NS-1 HUMAN PARVOVIRUS B19 236-270 PVNCS.sub.-- PAVPN NONCAPSID PROTEIN NS-1 HAMSTER PARVOVIRUS H1 35-76 259-297 PVNS1.sub.-- BTV10 NONCAPSID PROTEIN NS-1 PORCINE PARVOVIRUS (STRAIN NADL-2) 24-77 169-210 309-346 PVNS1.sub.-- BTV17 NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 10/ISOLATE USA) PVNS1.sub.-- BTV1A NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 17/ISOLATE USA) PVNS1.sub.-- BTV1S NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 1/ISOLATE AUSTRALIA) PVNS1.sub.-- BTV20 NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVNS1.sub.-- EHDV2 NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 20/ISOLATE AUSTRALIA) PVNS1.sub.-- IAANN NONSTRUCTURAL PROTEIN NS1 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 401-454 (SEROTYPE 2/STRAI PVNS1.sub.-- IACAO NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/ANN ARBOR/6/60) PVNS1.sub.-- IACKG NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 37-71 (STRAIN A/CAMEL/MONGOLIA/82 PVNS1.sub.-- IACKJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/CHICKEN/GERMANY/N/49) PVNS1.sub.-- IADA2 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/CHICKEN/JAPAN/24) PVNS1.sub.-- IADE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/DUCK/ALBERTA/60/76) PVNS1.sub.-- IADU3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/DUCK/ENGLAND/1/56) PVNS1.sub.-- IAFOM NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/DUCK/UKRAINE/1/63) PVNS1.sub.-- IAFOW NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/FORT MONMOUTH/1/47) PVNS1.sub.-- IAFPR NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/FORT WARREN/1/50, AND (STRA PVNS1.sub.-- IALE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PVNS1.sub.-- IALEN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/LENINGRAD/134/57) PVNS1.sub.-- IAMA6 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/LENINGRAD/54/1) PVNS1.sub.-- IAMAN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/MALLARD/ALBERTA/88/76 PVNS1.sub.-- IAMAO NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNS1.sub.-- IAMYN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/MALLARD/NEW YORK/6874/78 PVNS1.sub.-- IAPI0 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/MYNAH/HANEDA-THAI/76) PVNS1.sub.-- IAPI1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/119/79 PVNS1.sub.-- IAPI2 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/121/79) PVNS1.sub.-- IAPI3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/268/78 PVNS1.sub.-- IAPUE NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/358/79) PVNS1.sub.-- IATKB NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PUERTO RICO/8/34) PVNS1.sub.-- IATKC NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/TURKEY/BETHLEHEM-GLILIT/14 PVNS1.sub.-- IATKR NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/TURKEY/CANADA/63) PVNS1.sub.-- IATRS NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/TURKEY/OREGON/71) PVNS1.sub.-- IATRT NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/TERN/SOUTH AFRICA/61 PVNS1.sub.-- IAZI1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/TERN/TURKMENIA/18/72) PVNS1.sub.-- INBAC NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/SWINE/IOWA/15/30) PVNS1.sub.-- INBGA NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/ANN ARBOR/1/66[COLD-ADAPTE PVNS1.sub.-- INBHK NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/GA/86) PVNS1.sub.-- INBHT NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/HONG KONG/8/73), AND (STRAIN PVNS1.sub.-- INBID NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/HT/84) PVNS1.sub.-- INBLE NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/ID/86) PVNS1.sub.-- INBMD NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/LEE/40) PVNS1.sub.-- INBPA NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/MARYLAND/59) PVNS1.sub.-- INBRU NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 277-337 (STRAIN B/PA/79) PVNS1.sub.-- INBSI NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 139-173 (STRAIN B/RU/69) PVNS1.sub.-- INBSJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/SINGAPORE/222/79) PVNS1.sub.-- INBVJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/SINGAPORE/64) PVNS1.sub.-- INBYA NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/VICTORIA/87) PVNS2.sub.-- AHSV9 NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/YAMAGATA/1/73) PVNS2.sub.-- BTV17 NONSTRUCTURAL PROTEIN NS2 AFRICAN HORSE SICKNESS VIRUS 67-101 (SEROTYPE 9) PVNS2.sub.-- BTV1X NONSTRUCTURAL PROTEIN NS2 BLUETONGUE VIRUS 203-237 (SEROTYPE 17/ISOLATE USA) PVNS2.sub.-- CVMJH NONSTRUCTURAL PROTEIN NS2 BLUETONGUE VIRUS (SEROTYPE 10) 203-237 PVNS2.sub.-- EHDV2 NONSTRUCTURAL PROTEIN NS2 MURINE CORONAVIRUS MHV (STRAIN JHM) 71-105 PVNS2.sub.-- IAALA NONSTRUCTURAL PROTEIN NS2 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 206-272 276-311 (SEROTYPE 2/STRAI PVNS2.sub.-- IAANA NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/ALASKA/6/77), AND (STRAIN A/U PVNS2.sub.-- IAANN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/ANAS ACUTA/PRIMORJE/695/76) PVNS2.sub.-- IACHI NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/ANN ARBOR/6/60), AND (STRAIN PVNS2.sub.-- IACKG NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/CHILE/1/83) PVNS2.sub.-- IACKJ NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/CHICKEN/GERMANY/N/49) PVNS2.sub.-- IADA2 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-90 (STRAIN A/CHICKEN/JAPAN/24) PVNS2.sub.-- IADE1 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/DUCK/ALBERTA/60/76) PVNS2.sub.-- IADU3 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-90 (STRAIN A/DUCK/ENGLAND/1/56) PVNS2.sub.-- IAFOM NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-90 (STRAIN A/DUCK/UKRAINE/1/63) PVNS2.sub.-- IAFOW NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/FORT MONMOUTH/1/47) PVNS2.sub.-- IAFPR NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/FORT WARREN/1/50) PVNS2.sub.-- IALE2 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PVNS2.sub.-- IALEN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/LENINGRAD/134/17/57) PVNS2.sub.-- IAMA6 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/LENINGRAD/54/1) PVNS2.sub.-- IAMA8 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/MALLARD/ALBERTA/88/76) PVNS2.sub.-- IAMAN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/MALLARD/ALBERTA/827/78) PVNS2.sub.-- IAMAO NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNS2.sub.-- IAMYN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/MALLARD/NEW YORK/6874/78) PVNS2.sub.-- IAPI0 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-90 (STRAIN A/MYNAH/HANEDA-THAI/76) PVNS2.sub.-- IAPI1 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/PINTAIL/ALBERTA/119/79) PVNS2.sub.-- IAPI2 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/PINTAIL/ALBERTA/121/79) PVNS2.sub.-- IAPUE NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/PINTAIL/ALBERTA/268/78) PVNS2.sub.-- IATKB NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/PUERTO RICO/8/34) PVNS2.sub.-- IATKR NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/TURKEY/BETHLEHEM-GLILIT/14 PVNS2.sub.-- IATRS NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAIN A/TURKEY/OREGON/71 PVNS2.sub.-- IAUSS NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-52 (STRAIN A/TERN/SOUTH AFRICA/61) PVNS2.sub.-- INBLE NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/USSR/90/77) PVNS2.sub.-- INBYA NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS 2-43 59-119 (STRAIN B/LEE/40 PVNS2.sub.-- INCJJ NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS 2-43 59-119 (STRAIN B/YAMAGATA/1/73) PVNS2.sub.-- PVM NONSTRUCTURAL PROTEIN NS2 INFLUENZA C VIRUS 57-98 (STRAIN C/JJ/50) PVNS3.sub.-- AHSV3 NONSTRUCTURAL PROTEIN 2 PNEUMONIA VIRUS OF MICE 70-104 PVNS3.sub.-- AHSV9 NONSTRUCTURAL PROTEIN NS3 AFRICAN HORSE SICKNESS VIRUS 44-78 166-215 (SEROTYPE 3) PVNS3.sub.-- BRD NONSTRUCTURAL PROTEIN NS3 AFRICAN HORSE SICKNESS VIRUS 37-78 88-122 166-215 (SEROTYPE 9) PVNS3.sub.-- CVPFS NONSTRUCTURAL PROTEIN NS3 BROADHAVEN VIRUS 26-98 102-147 PVNS4.sub.-- CVH22 NONSTRUCTURAL PROTEIN 3-1 PORCINE TRANSMISSIBLE GASTROENTERITIS 13-51 CORONAVIRUS (S PVNS4.sub.-- RSV NONSTRUCTURAL PROTEIN 4 HUMAN CORONAVIRUS (STRAIN 229E) 11-52 PVNS7.sub.-- CVCAE NONSTRUCTURAL PROTEIN NS4 RICE STRIPE VIRUS 2-40 PVNS7.sub.-- CVFE3 NONSTRUCTURAL PROTEIN 7 CANINE ENTERIC CORONAVIRUS (STRAIN K378) 11-47 PVNS7.sub.-- FIPV NONSTRUCTURAL PROTEIN 7 FELINE ENTERIC CORONAVIRUS (STRAIN 79-1683) 1-42 PVNSC.sub.-- CDVO NONSTRUCTURAL PROTEIN 7 FELINE INFECTIOUS PERITONITIS VIRUS 1-42 (STRAIN 79-1146) PVNSC.sub.-- MEASE NONSTRUCTURAL PROTEIN C CANINE DISTEMPER VIRUS 50-84 95-152 (STRAIN ONDERSTEPOORT) PVNSC.sub.-- MEASI NONSTRUCTURAL PROTEIN C MEASLES VIRUS (STRAIN EDMONSTON) 43-84 PVNSC.sub.-- MEASY NONSTRUCTURAL PROTEIN C MEASLES VIRUS (STRAIN IP-3-CA) 43-84 PVNSC.sub.-- PI1HB NONSTRUCTURAL PROTEIN C MEASLES VIRUS (STRAIN YAMAGATA-1) 43-84 PVNSC.sub.-- PI1HC NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 133-167 (STRAIN C35) PVNSC.sub.-- PI1HD NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 133-167 (STRAIN C39) PVNSC.sub.-- PI1HE NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 133-167 (STRAIN C1-5/73) PVNSC.sub.-- PI3H4 NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 40-75 133-167 (STRAIN C1-14/83) PVNSC.sub.-- SEND6 NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 3 VIRUS 58-133 161-199 (STRAIN NIH 47885) PVNSC.sub.-- SENDH NONSTRUCTURAL PROTEIN C SENDAI VIRUS (STRAIN 6/94) 133-167 PVNSC.sub.-- SENDZ NONSTRUCTURAL PROTEIN C SENDAI VIRUS (STRAIN HARRIS) 133-167 PVNSM.sub.-- INSV NONSTRUCTURAL PROTEIN C SENDAI VIRUS (STRAIN Z) 133-167 PVNST.sub.-- BUNGE NONSTRUCTURAL PROTEIN NS-M IMPATIENS NECROTIC SPOT VIRUS (INSV) 44-102 262-296 PVNST.sub.-- BUNL7 NONSTRUCTURAL PROTEIN NS-S BUNYAVIRUS GERMISTON 34-75 PVNST.sub.-- BUNLC NONSTRUCTURAL PROTEIN NS-S BUNYAVIRUS LA CROSSE (ISOLATE L74) 5-39 PVNST.sub.-- MAGV NONSTRUCTURAL PROTEIN NS-S BUNYAVIRUS LA CROSSE 5-39 PVNST.sub.-- TOSV NONSTRUCTURAL PROTEIN NS-S MAGUARI VIRUS 35-69 PVNST.sub.-- UUK NONSTRUCTURAL PROTEIN NS-S TOSCANA VIRUS (TOS) 144-183 PVNUA.sub.-- PRVKA NONSTRUCTURAL PROTEIN NS-S UUKUNIEMI VIRUS (UUK) 139-173 PVNUC.sub.-- DHVI 1 PROBABLE NUCLEAR ANTIGEN PSEUDORABIES VIRUS (STRAIN KAPLAN) (PRV) 1134- 1175 PVNUC.sub.-- EBOV NUCLEOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/61) (DHO) 209-243 PVNUC.sub.-- IAANA NUCLEOPROTEIN EBOLA VIRUS 191-225 227-261 329-369 PVNUC.sub.-- IAANN NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/ANAS ACUTA/PRIMORJE/695/76) PVNUC.sub.-- IABRA NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-408 (STRAIN A/ANN ARBOR/6/60) PVNUC.sub.-- IABUD NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-408 (STRAIN A/BRAZIL/11/78) PVNUC.sub.-- IACAL NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PVNUC.sub.-- IACKG NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/CALIFORNIA/10/78) PVNUC.sub.-- IACKP NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/CHICKEN/GERMANY/N/49) PVNUC.sub.-- IADAU NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/CHICKEN/PENNSYLVANIA/1/83) PVNUC.sub.-- IADBE NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/DUCK/AUSTRALIA/749/80) PVNUC.sub.-- IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/DUCK/BEIJING/1/78) PVNUC.sub.-- IADE1 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 360-408 (STRAIN A/DUCK/CZECHOSLOVAKIA/56) PVNUC.sub.-- IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/DUCK/ENGLAND/1/56) PVNUC.sub.-- IADHK NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/DUCK/ENGLAND/1/62) PVNUC.sub.-- IADM2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/DUCK/HONG KONG/7/75) PVNUC.sub.-- IADMA NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/DUCK/MEMPHIS/928/74 PVNUC.sub.-- IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/DUCK/MANITOBA/1/53) PVNUC.sub.-- IADU2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/DUCK/NEW ZEALAND/31/76) PVNUC.sub.-- IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS 96-154 357-408 (STRAIN A/DUCK/UKRAINE/2/60) PVNUC.sub.-- IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/ENGLAND/19/55) PVNUC.sub.-- IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/FORT MONMOUTH/1/47) PVNUC.sub.-- IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS 357-408 (STRAIN A/FORT WARREN/1/50) PVNUC.sub.-- IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/FOWL PLAGUE VIRUS/DOBSONA PVNUC.sub.-- IAGRE NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 360-408 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCK PVNUC.sub.-- IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 113-154 357-408 (STRAIN A/GREY TEAL/AUSTRALIA/2/79) PVNUC.sub.-- IAGU2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-408 (STRAIN A/GULL/MARYLAND/5/77) PVNUC.sub.-- IAGU3 NUCLEOPROTEIN INFLUENZA A VIRUS 96-154 357-409 (STRAIN A/GULL/MARYLAND/704/77) PVNUC.sub.-- IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-409 (STRAIN A/GULL/MARYLAND/1824/78) PVNUC.sub.-- IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-409 (STRAIN A/GULL/MARYLAND/1815/79) PVNUC.sub.-- IAGUM NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-409 (STRAIN A/GULL/ASTRAKHAN/227/84) PVNUC.sub.-- IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-409 (STRAIN A/GULL/MASSACHUSETTS/26/80) PVNUC.sub.-- IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-409 (STRAIN A/GULL/MINNESOTA/945/80) PVNUC.sub.-- IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/HICKOX/40) PVNUC.sub.-- IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/EQUINE/JILLIN/1/89) PVNUC.sub.-- IAHMI NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/EQUINE/LONDON/1416/73) PVNUC.sub.-- IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 (STRAIN A/EQUINE/MIAMI/1/63) PVNUC.sub.-- IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/HONG KONG/1/68) PVNUC.sub.-- IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/HONG/KONG/5/83) PVNUC.sub.-- IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS 96-154 357-408 (STRAIN A/EQUINE/PRAGUE/1/56) PVNUC.sub.-- IAKIE NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 PVNUC.sub.-- IALEN NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/KIEV/59/79) PVNUC.sub.-- IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/LENINGRAD/54/1) PVNUC.sub.-- IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 PVNUC.sub.-- IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNUC.sub.-- IANEJ NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/MINK/SWEDEN/84) PVNUC.sub.-- IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/NEW JERSEY/8/76) PVNUC.sub.-- IAOHI NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/NT/60/68) PVNUC.sub.-- IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/OHIO/4/83) PVNUC.sub.-- IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/PARROT/ULSTER/73) PVNUC.sub.-- IARUD NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/PUERTO RICO/8/34) PVNUC.sub.-- IASE0 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/RUDDY TURNSTONE/NEW JERSE PVNUC.sub.-- IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SEAL/MASSACHUSETTS/1/80) PVNUC.sub.-- IASIN NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-408 (STRAIN A/SHEARWATER/AUSTRALIA/72) PVNUC.sub.-- IATEI NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/SINGAPORE/1/57) PVNUC.sub.-- IATKN NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/TEAL/ICELAND/29/80) PVNUC.sub.-- IATKO NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/TURKEY/MINNESOTA/1661/81) PVNUC.sub.-- IATRS NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/TURKEY/ONTARIO/7732/66) PVNUC.sub.-- IATRT NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 360-408 (STRAIN A/TERN/SOUTH AFRICA/61) PVNUC.sub.-- IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-405 (STRAIN A/TERN/TURKMENIA/18/72) PVNUC.sub.-- IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/TEXAS/1/77) PVNUC.sub.-- IAUSS NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/UDORN/307/72) PVNUC.sub.-- IAV16 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-408 (STRAIN A/USSR/90/77) PVNUC.sub.-- IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS 357-408 (STRAIN A/VICTORIA/5/68) PVNUC.sub.-- IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-409 (STRAIN A/WHALE/MAINE/328/84) PVNUC.sub.-- IAWIL NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/WHALE/PACIFIC OCEAN/19/76) PVNUC.sub.-- IAWIS NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/WILSON-SMITH/33) PVNUC.sub.-- IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/WISCONSIN/3523/88) PVNUC.sub.-- IAZ41 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/29/37) PVNUC.sub.-- IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/41/49) PVNUC.sub.-- IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/SWINE/CAMBRIDGE/1/35) PVNUC.sub.-- IAZGE NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/SWINE/DANDONG/9/83) PVNUC.sub.-- IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/GERMANY/2/81) PVNUC.sub.-- IAZH3 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/SWINE/HONG KONG/6/76) PVNUC.sub.-- IAZH4 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/HONG KONG/126/82) PVNUC.sub.-- IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/HONG KONG/127/82) PVNUC.sub.-- IAZI2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/IOWA/15/30) PVNUC.sub.-- IAZI3 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/IOWA/1976/31) PVNUC.sub.-- IAZJ1 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/IOWA/46) PVNUC.sub.-- IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/ITALY/437/76) PVNUC.sub.-- IAZJ3 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/ITALY/2/79) PVNUC.sub.-- IAZJ4 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/ITALY/141/81) PVNUC.sub.-- IAZJA NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/ITALY/839/89) PVNUC.sub.-- IAZMA NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/JAMESBURG/42) PVNUC.sub.-- IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/MAY/54) PVNUC.sub.-- IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/NETHERLANDS/12/85) PVNUC.sub.-- IAZON NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/OHIO/23/35) PVNUC.sub.-- IAZTE NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/ONTARIO/2/81) PVNUC.sub.-- IAZW1 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/TENNESSEE/24/77) PVNUC.sub.-- IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/WISCONSIN/1/57) PVNUC.sub.-- INBAA NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 96-154 357-408 (STRAIN A/SWINE/WISCONSIN/1/61) PVNUC.sub.-- INBAC NUCLEOPROTEIN INFLUENZA B VIRUS 75-142 480-514 (STRAIN B/ANN ARBOR/1/86) PVNUC.sub.-- INBAD NUCLEOPROTEIN INFLUENZA B VIRUS 75-142 480-514 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PVNUC.sub.-- INBLE NUCLEOPROTEIN INFLUENZA B VIRUS 75-145 480-514 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE]) PVNUC.sub.-- INBSI NUCLEOPROTEIN INFLUENZA B VIRUS 75-146 480-514 (STRAIN B/LEE/40) PVNUC.sub.-- INCCA NUCLEOPROTEIN INFLUENZA B VIRUS 75-142 480-514 (STRAIN B/SINGAPORE/222/79) PVNUC.sub.-- MABVM NUCLEOPROTEIN INFLUENZA C VIRUS 92-203 406-447 (STRAIN C/CALIFORNIA/78) PVNUC.sub.-- MABVP NUCLEOPROTEIN MARBURG VIRUS (STRAIN MUSOKE) 173-207 322-407 PVO01.sub.-- VACCC NUCLEOPROTEIN MARBURG VIRUS (STRAIN POPP) 173-207 322-407 PVO01.sub.-- VARV PROTEIN O1 VACCINIA VIRUS (STRAIN COPENHAGEN) 102-145 245-279 341-382 581-615 PVOR1.sub.-- FXMV PROTEIN O1 VARIOLA VIRUS 102-145 245-279 341-382 581-615 PVOR1.sub.-- NMV 152 KD PROTEIN FOXTAIL MOSAIC VIRUS 293-327 PVOR1.sub.-- PMV 186 KD PROTEIN NARCISSUS MOSAIC VIRUS (NMV) 1519- 1575 PVOR1.sub.-- PVMR 176 KD PROTEIN PAPAYA MOSAIC POTEXVIRUS (PMV) 1-39 299-337 1474- 1532 PVOR1.sub.-- PVX 223 KD PROTEIN POTATO VIRUS M (STRAIN RUSSIAN) (PVM) 597-638 682-759 PVOR1.sub.-- PVXCP 165 KD PROTEIN POTATO VIRUS X (PVX) 516-550 PVOR1.sub.-- SMYEA 165 KD PROTEIN POTATO VIRUS X (STRAIN CP) (PVX) 510-547 PVOR1.sub.-- WCMVM 150 KD PROTEIN STRAWBERRY MILD YELLOW EDGE- 308-342 931-965 ASSOCIATED VIRUS (SMYE PVOR1.sub.-- WCMVO 147 KD PROTEIN WHITE CLOVER MOSAIC VIRUS 1240- (STRAIN M) (WCMV) 1289 PVP10.sub.-- NPVAC 147 KD PROTEIN WHITE CLOVER MOSAIC VIRUS 1240- (STRAIN O) (WCMV) 1289 PVP10.sub.-- NPVOP P10 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 7-41 POLYHEDROSIS VIRUS ( PVP10.sub.-- RBSDV P10 PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 7-50 POLYHEDROSIS VIRUS PVP10.sub.-- RGDV PROTEIN S10 RICE BLACK STREAKED DWARF VIRUS 339-382 395-429 506-556 (RBSDV) PVP10.sub.-- WTV NONSTRUCTURAL PROTEIN PNS10 RICE GALL DWARF VIRUS (RGDV) 186-273 PVP11.sub.-- RDV NONSTRUCTURAL PROTEIN PNS10 WOUND TUMOR VIRUS (WTV) 220-254 PVP11.sub.-- WTV NONSTRUCTURAL PROTEIN PNS11 RICE DWARF VIRUS (RDV) 25-80 273-314 PVP12.sub.-- RDV NONSTRUCTURAL PROTEIN PNS11 WOUND TUMOR VIRUS (WTV) 16-74 PVP12.sub.-- WTV NONSTRUCTURAL PROTEIN P11 RICE DWARF VIRUS (RDV)) 140-181 PVP18.sub.-- WTVNJ NONSTRUCTURAL PROTEIN PNS12 WOUND TUMOR VIRUS (WTV) 68-108 PVP19.sub.-- HSVEB NONSTRUCTURAL PROTEIN PNS12 WOUND TUMOR VIRUS (STRAIN NJ) 68-108 (WTV) PVP23.sub.-- HCMVA CAPSID ASSEMBLY AND DNA MATURATION EQUINE HERPESVIRUS TYPE 1 189-231 PROTE (STRAIN AB4P) (EHV-1) PVP23.sub.-- HSV6U PROBABLE CAPSID PROTEIN VP23 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 41-82 146-180 PVP24.sub.-- EBOV PROBABLE CAPSID PROTEIN VP23 HERPES SIMPLEX VIRUS 47-81 (TYPE 6/STRAIN UGANDA-1102) PVP26.sub.-- HSVEB MEMBRANE-ASSOCIATED STRUCTURAL EBOLA VIRUS 166-200 PROTEIN V PVP26.sub.-- HSVSA CAPSID PROTEIN VP26 EQUINE HERPESVIRUS TYPE 1 36-77 (STRAIN AB4P) (EHV-1) PVP26.sub.-- NPVOP CAPSID PROTEIN VP26 HERPESVIRUS SAIMIRI (STRAIN 11) 41-78 PVP26.sub.-- VZVD P26 PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 118-159 POLYHEDROSIS VIRUS PVP2.sub.-- AHSV4 CAPSID PROTEIN VP26 VARICELLA-ZOSTER VIRUS 47-81 (STRAIN DUMAS) (VZV) PVP2.sub.-- BTV10 OUTER CAPSID PROTEIN VP2 AFRICAN HORSE SICKNESS VIRUS 136-188 270-304 410-465 614-662 684-720 976- (SEROTYPE 4/STRAIN VACCI 1056 PVP2.sub.-- BTV11 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS 168-225 (SEROTYPE 10/ISOLATE USA) PVP2.sub.-- BTV17 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS 77-111 559-593 (SEROTYPE 11/ISOLATE USA) PVP2.sub.-- BTV1S OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS 77-111 168-209 (SEROTYPE 17/ISOLATE USA) PVP2.sub.-- EHDV1 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS 119-153 576-610 668-702 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP2.sub.-- ROTBR OUTER CAPSID PROTEIN VP2 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 72-106 247-301 405-453 461-495 895-929 (SEROTYPE 1) (EHDV PVP2.sub.-- ROTBU RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN RF) 2-94 482-516 523-557 607-655 675-754 PVP2.sub.-- ROTHW RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN UK) 2-94 483-517 524-558 608-656 676-755 PVP2.sub.-- ROTPC RNA-BINDING PROTEIN VP2 HUMAN ROTAVIRUS 17-97 492-526 533-567 617-658 685-764 (SEROTYPE 1/STRAIN WA) PVP2.sub.-- ROTS1 RNA-BINDING PROTEIN VP2 PORCINE ROTAVIRUS 1-50 52-99 194-228 515-551 599-643 705-746 (GROUP C/STRAIN COWDEN) PVP30.sub.-- ASFE7 RNA-BINDING PROTEIN VP2 SIMIAN 11 ROTAVIRUS 36-96 483-517 608-656 680-755 (STRAIN SA11) PVP31.sub.-- FRG3V PHOSPHOPROTEIN P30 AFRICAN SWINE FEVER VIRUS 29-89 (STRAIN E-75) (ASFV) PVP32.sub.-- ASFB7 EARLY 31 KD PROTEIN FROG VIRUS 3 (FV3) 227-261 PVP35.sub.-- EBOV PHOSPHOPROTEIN P32 AFRICAN SWINE FEVER VIRUS 29-89 (STRAIN BA71V) (ASFV) PVP35.sub.-- NPVAC POLYMERASE COMPLEX PROTEIN VP35 EBOLA VIRUS 80-119 PVP35.sub.-- NPVBM EARLY 35 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 54-102 POLYHEDROSIS VIRUS PVP35.sub.-- VACCC EARLY 35 KD PROTEIN BOMBYX MORI NUCLEAR POLYHEDROSIS 54-102 224-258 VIRUS (BMNPV) PVP35.sub.-- VACCP IMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN COPENHAGEN) 140-181 PROTEIN P35 PVP35.sub.-- VACCV IMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN L-IVP) 17-51 PROTEIN P35 PVP35.sub.-- VARV IMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN WR) 140-181 PROTEIN P35 PVP3.sub.-- AHSV4 IMMUNODOMINANT ENVELOPE VARIOLA VIRUS 141-182 PROTEIN P35 PVP3.sub.-- BTV10 VP3 CORE PROTEIN AFRICAN HORSE SICKNESS VIRUS 173-214 240-274 667-704 (SEROTYPE 4/STRAIN VACCI PVP3.sub.-- BTV17 VP3 CORE PROTEIN BLUETONGUE VIRUS 214-255 853-894 (SEROTYPE 10/ISOLATE USA) PVP3.sub.-- BTV1A VP3 CORE PROTEIN BLUETONGUE VIRUS 214-255 853-894 (SEROTYPE 17/ISOLATE USA) PVP3.sub.-- EHDV1 VP3 CORE PROTEIN BLUETONGUE VIRUS 214-255 853-894 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP3.sub.-- EHDVA VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 208-246 798-832 851-892 (SEROTYPE 1) (EHDV PVP3.sub.-- GFLV VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 208-246 735-770 798-832 851-892 PVP3.sub.-- RDV P3 PROTEIN GRAPEVINE FANLEAF VIRUS (GFLV) 96-133 PVP3.sub.-- ROTPC MAJOR 114 KD STRUCTURAL PROTEIN RICE DWARF VIRUS (RDV) 299-337 817-872 PVP3.sub.-- ROTS1 INNER CORE PROTEIN VP3 PORCINE ROTAVIRUS 24-58 229-263 329-395 406-446 640-688 (GROUP C/STRAIN COWDEN) PVP40.sub.-- EBV INNER CORE PROTEIN VP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 26-76 244-278 331-365 415-492 662-696 PVP40.sub.-- HSV11 CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS 433-467 (STRAIN B95-8) (HUMAN HERPESVIRUS 4) PVP40.sub.-- HSVEB CAPSID PROTEIN P40 HERPES SIMPLEX VIRUS 206-257 599-633 (TYPE 1/STRAIN 17) PVP40.sub.-- ILTVT CAPSID PROTEIN P40 EQUINE HERPESVIRUS TYPE 1 180-245 (STRAIN AB4P) (EHV-1) PVP40.sub.-- SCMVC CAPSID PROTEIN P40 INFECTIOUS LARYNGOTRACHEITIS VIRUS 1-35 509-557 (STRAIN THORNE V88 PVP40.sub.-- VZVD CAPSID PROTEIN P40 SIMIAN CYTOMEGALOVIRUS 457-498 (STRAIN COLBURN) PVP41.sub.-- NPVAC CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS 167-246 486-522 (STRAIN DUMAS) (VZV) PVP41.sub.-- ROTS1 STRUCTURAL GLYCOPROTEIN GP41 AUTOGRAPHA CALIFORNICA NUCLEAR 132-166 POLYHEDROSIS VIRUS ( PVP42.sub.-- ROTS1 OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 1-35 484-518 528-630 PVP4A.sub.-- VACCC OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 1-35 237-518 531-646 PVP4A.sub.-- VACCV MAJOR CORE PROTEIN P4A PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 355-359 718-763 794-828 857-891 PVP4A.sub.-- VARV MAJOR CORE PROTEIN P4A PRECURSOR VACCINIA VIRUS (STRAIN WR) 262-296 355-359 718-763 794-828 857-891 PVP4B.sub.-- FOWPV MAJOR CORE PROTEIN P4A PRECURSOR VARIOLA VIRUS 355-389 719-764 795-829 858-892 PVP4B.sub.-- VACCC MAJOR CORE PROTEIN P4B PRECURSOR FOWLPOX VIRUS 131-172 296-330 PVP4B.sub.-- VACCV MAJOR CORE PROTEIN P4B PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 3-37 125-163 249-283 PVP4B.sub.-- VARV MAJOR CORE PROTEIN P4B PRECURSOR VACCINIA VIRUS (STRAIN WR) 3-37 125-163 249-283 PVP4.sub.-- BTV10 MAJOR CORE PROTEIN P4B PRECURSOR VARIOLA VIRUS 3-37 125-163 249-283 PVP4.sub.-- BTV11 VP4 CORE PROTEIN BLUETONGUE VIRUS 579-617 619-653 (SEROTYPE 10/ISOLATE USA) PVP4.sub.-- BTV13 VP4 CORE PROTEIN BLUETONGUE VIRUS 569-607 609-643 (SEROTYPE 11/ISOLATE USA) PVP4.sub.-- BTV2A VP4 CORE PROTEIN BLUETONGUE VIRUS 569-607 609-643 (SEROTYPE 13/ISOLATE USA) PVP4.sub.-- NCDV VP4 CORE PROTEIN BLUETONGUE VIRUS 569-607 609-643 (SEROTYPE 2/ISOLATE USA) PVP4.sub.-- RDV OUTER CAPSID PROTEIN VP4 NEBRASKA CALF DIARRHEA VIRUS 484-518 528-630 (STRAIN NCDV-LINCOLN) PVP4.sub.-- ROTB4 NONSTRUCTURAL PROTEIN PNS4 RICE DWARF VIRUS (RDV) 388-437 444-478 627-679 PVP4.sub.-- ROTBC OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS 1-35 112-146 338-379 484-518 528-653 (SEROTYPE 6/STRAIN B641) PVP4.sub.-- ROTBU OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS 1-35 484-518 528-630 (STRAIN C486) PVP4.sub.-- ROTEH OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS 1-35 112-146 338-379 484-518 528-653 (STRAIN UK) PVP4.sub.-- ROTG1 OUTER CAPSID PROTEIN VP4 EQUINE ROTAVIRUS 1-35 112-146 227-274 345-379 484-518 528-653 (STRAIN H-2) PVP4.sub.-- ROTH1 OUTER CAPSID PROTEIN VP4 ROTAVIRUS (GROUP B/STRAIN IDIR) 117-151 476-519 PVP4.sub.-- ROTH5 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 236-273 337-378 483-517 530-645 (SEROTYPE 1/STRAIN 1076) PVP4.sub.-- ROTH6 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 236-273 337-378 483-517 527-652 (SEROTYPE 2/STRAIN RV-5) PVP4.sub.-- ROTHD OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 112-146 237-274 338-379 484-518 531-646 (SEROTYPE 1/STRAIN 69M) PVP4.sub.-- ROTHJ OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 236-273 337-378 483-517 527-652 (SEROTYPE 2/STRAIN DS1) PVP4.sub.-- ROTHK OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 237-274 345-379 484-518 528-588 (STRAIN K8) PVP4.sub.-- ROTHL OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 337-378 483-517 527-652 (STRAIN KU) PVP4.sub.-- ROTHM OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 236-273 337-378 483-517 527-652 (STRAIN L26) PVP4.sub.-- ROTHN OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 337-378 483-517 530-645 (SEROTYPE 1/STRAIN M37) PVP4.sub.-- ROTHP OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 237-274 338-379 484-518 531-645 (SEROTYPE 3/STRAIN MCN13) PVP4.sub.-- ROTHR OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 236-273 337-378 483-517 527-652 (SEROTYPE 3/STRAIN P) PVP4.sub.-- ROTHT OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-38 91-146 227-274 (SEROTYPE 3/STRAIN RRV) PVP4.sub.-- ROTHV OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 236-273 337-378 483-517 530-644 (SEROTYPE 4/STRAIN ST. THOMAS 3) PVP4.sub.-- ROTHW OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 237-273 344-378 483-517 527-652 (SEROTYPE 4/STRAIN VA70 PVP4.sub.-- ROTP5 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 237-273 344-378 483-517 527-652 (SEROTYPE 1/STRAIN WA) PVP4.sub.-- ROTPC OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS 112-146 484-518 528-629 (SEROTYPE 5/STRAIN OSU) PVP4.sub.-- ROTPG OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS 6-40 127-161 241-278 293-334 580-614 (GROUP C/STRAIN COWDEN) PVP4.sub.-- ROTPY OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS 1-35 236-273 337-378 483-517 530-564 569-638 (STRAIN GOTTFRIED) PVP4.sub.-- ROTRH OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS 1-35 112-146 237-274 484-518 528-629 (STRAIN YM) PVP4.sub.-- RPTSF OUTER CAPSID PROTEIN VP4 RHESUS ROTAVIRUS 1-38 112-146 237-274 338-379 484-522 531-646 PVP4.sub.-- ROTSS OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS 1-35 484-518 528-630 (STRAIN SA11-FEM) PVP4.sub.-- WTV DE OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS 1-35 237-274 345-379 484-518 531-646 (STRAIN SA11-SEM) PVP5.sub.-- AHSV4 NONSTRUCTURAL PROTEIN PNS4 WOUND TUMOR VIRUS (WTV) 28-62 565-621 PVP5.sub.-- BRD OUTER CAPSID PROTEIN VP5 AFRICAN HORSE SICKNESS VIRUS 7-58 113-229 (SEROTYPE 4/STRAIN VACCI PVP5.sub.-- BTV10 OUTER CAPSID PROTEIN VP5 BROADHAVEN VIRUS (BRD) 45-86 98-226 PVP5.sub.-- BTV11 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58 92-150 154-222 404-438 (SEROTYPE 10/ISOLATE USA) PVP5.sub.-- BTV13 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58 92-150 154-222 404-445 (SEROTYPE 11/ISOLATE USA) PVP5.sub.-- BTV1A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58 154-222 404-438 (SEROTYPE 13/ISOLATE USA) PVP5.sub.-- BTV1S OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58 92-143 148-222 404-438 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP5.sub.-- BTV2A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58 92-143 148-222 404-438 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP5.sub.-- EHDV1 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58 92-222 404-438 (SEROTYPE 2/ISOLATE USA) PVP5.sub.-- RDV OUTER CAPSID PROTEIN VP5 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 24-58 92-126 163-233 291-325 399-433 (SEROTYPE 1) (EHDV PVP5.sub.-- WTV OUTER COAT PROTEIN P5 RICE DWARF VIRUS (RDV) 38-86 95-136 505-594 PVP61.sub.-- BTV10 OUTER COAT PROTEIN P5 WOUND TUMOR VIRUS (WTV) 434-503 547-581 751-798 PVP61.sub.-- MRDV VP6 PROTEIN BLUETONGUE VIRUS 163-215 (SEROTYPE 10/ISOLATE USA) PVP61.sub.-- NPVAC PROBABLE NONSTRUCTURAL 41.0 KD MAIZE ROUGH DWARF VIRUS (MRDV) 128-202 PROTEIN PVP62.sub.-- BTV10 61 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 29-96 351-386 POLYHEDROSIS VIRUS ( PVP64.sub.-- NPVOP VP6 PROTEIN BLUETONGUE VIRUS 47-88 159-207 214-251 (SEROTYPE 10/ISOLATE USA) PVP67.sub.-- NPVAC MAJOR ENVELOPE GLYCOPROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 296-361 431-479 PRECURSOR POLYHEDROSIS VIRUS PVP67.sub.-- NPVGM MAJOR ENVELOPE GLYCOPROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 44-78 289-364 443-477 PRECURSOR POLYHEDROSIS VIRUS ( PVP6.sub.-- BTV11 MAJOR ENVELOPE GLYCOPROTEIN GALLERIA MELLONELLA NUCLEAR 206-281 POLYHEDROSIS VIRUS (GMN PVP6.sub.-- BTV13 VP6 PROTEIN BLUETONGUE VIRUS 159-211 (SEROTYPE 11/ISOLATE USA) PVP6.sub.-- BTV17 VP6 PROTEIN BLUETONGUE VIRUS 159-211 (SEROTYPE 13/ISOLATE USA) PVP6.sub.-- BTV1S VP6 PROTEIN BLUETONGUE VIRUS 68-102 159-211 (SEROTYPE 17/ISOLATE USA) PVP6.sub.-- BTV2A VP6 PROTEIN BLUETONGUE VIRUS 12-78 163-211 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP6.sub.-- RDV VP6 PROTEIN BLUETONGUE VIRUS 44-78 135-187 (SEROTYPE 2/ISOLATE USA) PVP6.sub.-- WTV STRUCTURAL PROTEIN P6 RICE DWARF VIRUS (RDV) 150-191 296-344 360-401 PVP6.sub.-- WTVNJ STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS (WTV) 144-178 286-334 400-434 PVP74.sub.-- NPVAC STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS 144-178 286-334 (STRAIN NJ) (WTV) PVP74.sub.-- NPVCF P74 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 387-456 POLYHEDROSIS VIRUS ( PVP75.sub.-- HSVSA P74 PROTEIN CHORISTONEURA FUMIFERANA NUCLEAR 385-453 POLYHEDROSIS VIRU PVP79.sub.-- NPVAC PROBABLE MEMBRANE ANTIGEN 75 HERPESVIRUS SAIMIRI (STRAIN 11) 50-99 163-211 931-984 PVP7.sub.-- BTV10 79 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 44-78 363-397 406-440 POLYHEDROSIS VIRUS ( PVP7.sub.-- BTV13 VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 10/ISOLATE USA), (SEROTYPE - PVP7.sub.-- BTV17 VP7 CORE PROTEIN BLUETONGUE VIRUS 201-235 (SEROTYPE 13/ISOLATE USA) PVP7.sub.-- BTV1A VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 17/ISOLATE USA) PVP7.sub.-- BTV1S VP7 CORE PROTEIN BLUETONGUE VIRUS 184-235 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP7.sub.-- BTV2A VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP7.sub.-- EHDV1 VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 2/ISOLATE USA) PVP7.sub.-- RDV VP7 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 16-50 134-178 (SEROTYPE 1) (EHDV PVP7.sub.-- WTV NONSTRUCTURAL PROTEIN PNS7 RICE DWARF VIRUS (RDV) 47-95 172-255 PVP80.sub.-- NPVAC NONSTRUCTURAL PROTEIN PNS7 WOUND TUMOR VIRUS (WTV) 47-84 195-243 458-495 PVP87.sub.-- NPVOP CAPSID PROTEIN P80 AUTOGRAPHA CALIFORNICA NUCLEAR 7-51 99-142 156-204 221-298 POLYHEDROSIS VIRUS ( PVP8.sub.-- BTV10 CAPSID PROTEIN P87 ORGYIA PSEUDOTSUGATA MULTICAPSID 80-162 410-451 POLYHEDROSIS VIRUS PVP8.sub.-- BTV11 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 54-102 185-219 (SEROTYPE 10/ISOLATE USA) PVP8.sub.-- BTV13 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 54-102 185-219 (SEROTYPE 11/ISOLATE USA) PVP8.sub.-- BTV17 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 54-102 185-219 (SEROTYPE 13/ISOLATE USA) PVP8.sub.-- BTV1A NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 54-102 185-219 (SEROTYPE 17/ISOLATE USA) PVP8.sub.-- BTV1S NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 54-102 185-219 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP8.sub.-- BTV2A NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 54-102 185-219 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP8.sub.-- FOWPV NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 54-102 185-219 (SEROTYPE 2/ISOLATE USA) PVP9.sub.-- RDV STRUCTURAL PROTEIN VP8 PRECURSOR FOWLPOX VIRUS 193-245 PVP9.sub.-- WTV NONSTRUCTURAL PROTEIN PNS9 RICE DWARF VIRUS (RDV) 13-47 186-226 PVP9.sub.-- WTVNJ STRUCTURAL PROTEIN P9 WOUND TUMOR VIRUS (WTV) 140-212 PVPG.sub.-- BYDV1 STRUCTURAL PROTEIN P9 WOUND TUMOR VIRUS 140-212 (STRAIN NJ) (WTV) PVPHE.sub.-- NPVAC PUTATIVE GENOME-LINKED PROTEIN BARLEY YELLOW DWARF VIRUS 25-59 PRECURSOR (ISOLATE MAV-PS1) (BYDV) PVPHE.sub.-- NPVOP 29 KD POLYHEDRAL ENVELOPE PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 146-223 POLYHEDROSIS VIRUS ( PVPR.sub.-- SIVML 32 KD POLYHEDRAL ENVELOPE PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 131-201 206-265 POLYHEDROSIS VIRUS PVPU.sub.-- HV1A2 VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 78-115 (K78 ISOLATE) (SIV-MAC) PVPU.sub.-- HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-38 (ARV2/SF2 ISOLATE PVPU.sub.-- HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 4-72 (BH10 ISOLATE) (HI PVPU.sub.-- HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-72 (BH8 ISOLATE) (HIV - PVPU.sub.-- HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 4-59 (BRAIN ISOLATE) (H PVPU.sub.-- HV1C4 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 4-72 (BRU ISOLATE) (HIV PVPU.sub.-- HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 3-40 (CDC-451 ISOLATE) PVPU.sub.-- HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 6-40 (ELI ISOLATE) (HIV- PVPU.sub.-- HV1J3 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-72 (HXB2 ISOLATE) (HI PVPU.sub.-- HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 2-50 (JH3 ISOLATE) (HIV- PVPU.sub.-- HV1MA VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 4-59 (JRCSF ISOLATE) (H PVPU.sub.-- HV1ND VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-50 (MAL ISOLATE) (HI PVPU.sub.-- HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 4-40 (NDK ISOLATE) (HI PVPU.sub.-- HV1RH VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 4-72 (PV22 ISOLATE) (HI PVPU.sub.-- HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-39 (RF/HAT ISOLATE) ( PVPU.sub.-- HV1Z2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 4-59 (SF162 ISOLATE) (HI PVPU.sub.-- SIVCZ VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 6-40 (Z2/CDC-Z34 ISOLAT PVPX.sub.-- HV2D2 VPU PROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 21-78 (SIV(CPZ)) (CIV) PVRNA.sub.-- BSMV VPX PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 42-85 (ISOLATE D205,7) (H PVS05.sub.-- ROTS1 ALPHA-A PROTEIN BARLEY STRIPE MOSAIC VIRUS (BSMV) 40-74 857-898 PVS06.sub.-- ROTBS NONSTRUCTURAL PROTEIN NCVP2 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 248-287 PVS06.sub.-- ROTGA VP6 PROTEIN BOVINE ROTAVIRUS 6-44 (GROUP C/STRAIN SHINTOKU) PVS06.sub.-- ROTGI VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV) 69-144 (ADULT DIARRHEA ROTA PVS06.sub.-- ROTHC VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN IDIR) 24-58 64-103 PVS06.sub.-- ROTPC VP6 PROTEIN HUMAN ROTAVIRUS 9-43 (GROUP C/STRAIN BRISTOL) PVS07.sub.-- ROTBJ VP6 PROTEIN PORCINE ROTAVIRUS 9-43 (GROUP C/STRAIN COWDEN) PVS07.sub.-- ROTBU GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN KN-4) 2-36 282-320 PVS07.sub.-- ROTP5 NONSTRUCTURAL PROTEIN NCVP3 BOVINE ROTAVIRUS (STRAIN UK) 88-153 199-236 PVS07.sub.- - ROTS1 NONSTRUCTURAL PROTEIN NCVP3 PORCINE ROTAVIRUS 88-162 202-236 (SEROTYPE 5/STRAIN OSU) PVS08.sub.-- ROTBU NONSTRUCTURAL PROTEIN NCVP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 88-153 199-236 PVS08.sub.-- ROTS1 NONSTRUCTURAL PROTEIN NS2/VP9 BOVINE ROTAVIRUS (STRAIN UK) 2-70 75-119 160-226 PVS09.sub.-- ROTB4 NONSTRUCTURAL PROTEIN NCVP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 2-46 144-212 217-255 PVS09.sub.-- ROTB5 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS 2-54 282-320 (SEROTYPE 6/STRAIN B641) PVS09.sub.-- ROTB6 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN A5) 2-43 282-320 PVS09.sub.-- ROTBA GLYCOPROTEIN VP7 BOVINE ROTAVIRUS 2-54 282-320 (SEROTYPE 6/STRAIN 61A) PVS09.sub.-- ROTBB GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN A44) 2-54 282-320 PVS09.sub.-- ROTBK GLYCOPROTEIN VP7 BOVINE ROTAVIRUS 2-54 282-320 (SEROTYPE 10/STRAIN B223) PVS09.sub.-- ROTBN GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN KK3) 2-54 282-320 PVS09.sub.-- ROTBT GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN NCDV) 2-54 282-320 PVS09.sub.-- ROTBU GLYCOPROTEIN VP7 BOVINE ROTAVIRUS 2-43 282-320 (SEROTYPE 1/STRAIN T449) PVS09.sub.-- ROTC7 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN UK) 2-54 282-320 PVS09.sub.-- ROTEL GLYCOPROTEIN VP7 CHICKEN ROTAVIRUS A 285-326 (SEROTYPE 7/STRAIN CH2) PVS09.sub.-- ROTGA GLYCOPROTEIN VP7 EQUINE ROTAVIRUS (STRAIN L338) 282-320 PVS09.sub.-- ROTGI GLYCOPROTEIN VP7 PRECURSOR ROTAVIRUS (GROUP B/STRAIN ADRV) 43-77 (ADULT DIARRHEA ROTA PVS09.sub.-- ROTH4 GLYCOPROTEIN VP7 PRECURSOR ROTAVIRUS (GROUP B/STRAIN IDIR) 45-79 PVS09.sub.-- ROTH9 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 2-43 282-320 (SEROTYPE 4/STRAIN RV-4) PVS09.sub.-- ROTHA GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE G/STRAIN RK9) PVS09.sub.-- ROTHB GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN HU5) PVS09.sub.-- ROTHD GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 2-43 282-320 (SEROTYPE G/STRAIN B37) PVS09.sub.-- ROTHH GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN DS1) PVS09.sub.-- ROTHL GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN HN126) PVS09.sub.-- ROTHM GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (STRAIN L26) 1-35 282-320 PVS09.sub.-- ROTHO GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 2-43 282-320 (SEROTYPE 1/STRAIN M37) PVS09.sub.-- ROTHP GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 2-43 282-320 (SEROTYPE 1/STRAIN MO AND STRAIN D) PVS09.sub.-- ROTHR GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN P) PVS09.sub.-- ROTHS GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN RRV) PVS09.sub.-- ROTHT GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN S2) PVS09.sub.-- ROTHV GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 18-56 208-242 282-320 (SEROTYPE 4/STRAIN ST. THOMAS 3) PVS09.sub.-- ROTHW GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 18-56 208-242 282-320 (SEROTYPE 4/STRAIN VA70) PVS09.sub.-- ROTP2 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 2-43 282-320 (SEROTYPE 1/STRAIN WA) PVS09.sub.-- ROTP3 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN AT/76) PVS09.sub.-- ROTP4 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN CRW-8) PVS09.sub.-- ROTP5 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 2-56 208-242 282-320 (SEROTYPE 4/STRAIN OSU) PVS09.sub.-- ROTP6 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 5/STRAIN OSU) PVS09.sub.-- ROTPB GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 5/STRAIN TFR-41) PVS09.sub.-- ROTPK GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 18-56 208-242 282-320 (SEROTYPE 4/STRAIN BEN-144) PVS09.sub.-- ROTPM GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (STRAIN K) 18-56 282-320 PVS09.sub.-- ROTPY GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 18-56 208-242 282-320 (SEROTYPE 4/STRAIN BMI-1) PVS09.sub.-- ROTRH GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (STRAIN YM) 1-35 282-320 PVS09.sub.-- ROTS1 GLYCOPROTEIN VP7 RHESUS ROTAVIRUS 282-320 PVS10.sub.-- ROTBN GLYCOPROTEIN VP7 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 282-320 PVS10.sub.-- ROTBS NONSTRUCTURAL GLYCOPROTEIN NCVP5 BOVINE ROTAVIRUS (STRAIN NCDV) 73-161 PVS10.sub.-- ROTBU MINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS 17-58 (GROUP C/STRAIN SHINTOKU) PVS10.sub.-- ROTH2 NONSTRUCTURAL GLYCOPROTEIN NCVP5 BOVINE ROTAVIRUS (STRAIN UK) 73-161 PVS10.sub.- - ROTH7 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAIN A28) 73-162 PVS10.sub.-- ROTH8 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAIN A64/CLONE 2) 73-162 PVS10.sub.-- ROTHC NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAIN A64/CLONE 6) 73-162 PVS10.sub.-- ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 121-158 (GROUP C/STRAIN BRISTOL) PVS10.sub.-- ROTS1 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS 73-136 (SEROTYPE 1/STRAIN WA) PVS11.sub.-- ROTGA NONSTRUCTURAL GLYCOPROTEIN NCVP5 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 73-162 PVS11.sub.-- ROTGI NONSTRUCTURAL PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV) 24-65 96-130 (ADULT DIARRHEA ROTA PVS11.sub.-- ROTH5 NONSTRUCTURAL PROTEIN ROTAVIRUS (GROUP B/STRAIN IDIR) 9-68 PVS11.sub.-- ROTH6 MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 100-145 (SEROTYPE 2/STRAIN RV-5) PVS11.sub.-- ROTHB MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 107-144 (SEROTYPE 1/STRAIN 69M) PVS11.sub.-- ROTHD MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 107-144 (SEROTYPE G/STRAIN B37) PVS11.sub.-- ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 111-145 (SEROTYPE 2/STRAIN DS1) PVS11.sub.-- ROTS1 MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 111-145 (SEROTYPE 1/STRAIN WA) PVS48.sub.-- TBRVC MINOR OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 111-145 PVSH.sub.-- MUMP1 SATELLITE RNA 48 KD PROTEIN TOMATO BLACK RING VIRUS 217-265 (STRAIN C) (TBRV) PVSH.sub.-- MUMP2 SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN SBL-1), 9-46 AND MUMPS VIRUS (STRAIN SBL) PVSH.sub.-- MUMP4 SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN EDINGBURGH 2), 13-47 AND (STRAIN EDINGB PVSH.sub.-- MUMPA SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN EDINGBURGH 4) 13-47 PVSH.sub.-- MUMPB SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MATSUYAMA) 13-51 PVSH.sub.-- MUMPE SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BELFAST) 13-52 PVSH.sub.-- MUMPJ SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN ENDERS) 9-46 PVSH.sub.-- MUMPK SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN JERYL-LYNN) 9-46 PVSH.sub.-- MUMPL SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN KILHAM) 9-51 PVSH.sub.-- MUMPM SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BRISTOL 1) 13-55 PVSH.sub.-- MUMPT SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 17-51 PVSH.sub.-- MUMPU SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN TAKAHASHI) 13-47 PVSI1.sub.-- REOVD SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS 13-47 (STRAIN URABE VACCINE AM9) PVSI1.sub.-- REOVJ SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 3/STRAIN DEARING) 8-122 127-175 222-259 PVSI1.sub.-- REOVL SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 2/STRAIN D5/JONES) 1-178 PVSI2.sub .-- REOVD SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 1/STRAIN LANG) 3-107 112-198 PVSI2.sub.-- REOVL SIGMA 2 PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 350-384 PVSIS.sub.-- REOVD SIGMA 2 PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 350-384 PVSIS.sub.-- REOVJ SIGMA 1-S PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 85-119 PVST2.sub.-- HEVBU SIGMA 1-S PROTEIN REOVIRUS (TYPE 2/STRAIN D5/JONES) 7-45 PVST2.sub.-- HEVME STRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS (STRAIN BURMA) (HEV) 318-352 PVST2.sub.-- HEVMY STRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS (STRAIN MEXICO) (HEV) 317-351 PVST2.sub.-- HEVPA STRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS (STRAIN MYANMAR) (HEV) 318-352 PVST2.sub.-- HEVRH STRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS (STRAIN PAKISTAN) (HEV) 318-352 PVT3A.sub.-- CAPVI STRUCTURAL PROTEIN 2 HEPATITIS E VIRUS (ISOLATE RHESUS) (HEV) 186-220 PVT4.sub.-- CAPVI PROTEIN T3A CAPRIPOXVIRUS (STRAIN INS-1) 120-158 PVT4.sub.-- CAPVK T4 PROTEIN CAPRIPOXVIRUS (STRAIN INS-1) 86-120 PVTER.sub.-- EBV T4 PROTEIN CAPRIPOXVIRUS (STRAIN KS-1) 86-120 PVTER.sub.-- HCMVA PROBABLE DNA PACKAGING PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 235-290 595-629 (HUMAN HERPESVIRUS 4) PVTER.sub.-- HSV6U PROBABLE DNA PACKAGING PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 417-451 617-658 PVTER.sub.-- HSVEB PROBABLE DNA PACKAGING PROTEIN HERPES SIMPLEX VIRUS 468-502 (TYPE 6/STRAIN UGANDA-1102) PVTER.sub.-- HSVI1 PROBABLE DNA PACKAGING PROTEIN EQUINE HERPESVIRUS TYPE 1 11-45 (STRAIN AB4P) (EHV-1) PVTER.sub.-- HSVSA PROBABLE DNA PACKAGING PROTEIN ICTALURID HERPESVIRUS 1 98-136 698-744 (CHANNEL CATFISH VIRUS) (CCV) PVTER.sub.-- VZVD PROBABLE DNA PACKAGING PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 226-267 PVV.sub.-- PI4HA PROBABLE DNA PACKAGING PROTEIN VARICELLA-ZOSTER VIRUS 588-622 (STRAIN DUMAS) (VZV) PVY1.sub.-- SEND6 V PROTEIN HUMAN PARAINFLUENZA 4A VIRUS 4-38 (STRAIN TOSHIBA) (PIV-4A) PY101.sub.-- SSV1 Y1 PROTEIN SENDAI VIRUS (STRAIN 6/94) 104-138 PY108.sub.-- SSV1 HYPOTHETICAL 10.1 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLE SSV1 16-80 PY110.sub.-- SSV1 HYPOTHETICAL 10.8 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLE SSV1 4-65 PY119.sub.-- SSV1 HYPOTHETICAL 11.0 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLE SSV1 55-59 PY11K.sub.-- TYDVA HYPOTHETICAL 11.9 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLE SSV1 30-96 PY12K.sub.-- FCVC6 HYPOTHETICAL 11.2 KD PROTEIN TOBACCO YELLOW DWARF VIRUS 53-87 (STRAIN AUSTRALIA) (TYDV) PY12K.sub.-- FCVF9 HYPOTHETICAL 12.2 KD PROTEIN FELINE CALICIVIRUS 4-38 IN COAT PROTEIN (STRAIN CF1/68 FIV) (FCV) PY12K.sub.-- RHDV HYPOTHETICAL 12.1 KD PROTEIN FELINE CALICIVIRUS 4-38 IN COAT PROTEIN (STRAIN F9) (FCV) PY12K.sub.-- RHDV3 HYPOTHETICAL 12.7 KD PROTEIN RABBIT HEMORRHAGIC DISEASE VIRUS 13-50 IN COAT PROTEI (RHDV) PY13K.sub.-- CLVK HYPOTHETICAL 12.7 KD PROTEIN RABBIT HEMORRHAGIC DISEASE VIRUS 13-50 IN COAT PROTEIN (STRAIN V-351) (RHDV) PY13K.sub.-- CLVN HYPOTHETICAL 13.1 KD PROTEIN CASSAVA LATENT VIRUS 40-77 (STRAIN WEST KENYAN 844) PY13K.sub.-- NPVOP HYPOTHETICAL 13.1 KD PROTEIN CASSAVA LATENT VIRUS 43-77 (STRAIN NIGERIAN) PY13K.sub.-- SSV1 HYPOTHETICAL 14.5 KD PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 16-67 IN 39 KD PROTEIN POLYHEDROSIS VIRUS PY14K.sub.-- SSV1 HYPOTHETICAL 13.2 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 2-36 62-96 PY168.sub.-- ADE02 HYPOTHETICAL 13.7 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 5-39 PY16K.sub.-- SSV1 HYPOTHETICAL PROTEIN C-168 HUMAN ADENOVIRUS TYPE 2 119-166 PY17K.sub.-- SSV1 HYPOTHETICAL 15.6 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 1-35 77-111 PY18K.sub.-- SSV1 HYPOTHETICAL 17.8 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 1-45 119-153 PY20K.sub.-- SSV1 HYPOTHETICAL 18.0 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 102-136 PY28K.sub.-- SSV1 HYPOTHETICAL 20.4 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 73-107 PY2.sub.-- SOCMV HYPOTHETICAL 28.5 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 127-180 PY31K.sub.-- SSV1 HYPOTHETICAL PROTEIN 2 SOYBEAN CHLOROTIC MOTTLE VIRUS 117-154 PY32K.sub.-- SSV1 HYPOTHETICAL 31.5 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 7-97 100-141 PY38K.sub.-- NPVAC HYPOTHETICAL 31.7 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 230-278 PY3.sub.-- SOCMV HYPOTHETICAL 37.7 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 133-241 POLYHEDROSIS VIRUS ( PY5K9.sub.-- SSV1 HYPOTHETICAL PROTEIN 3 SOYBEAN CHLOROTIC MOTTLE VIRUS 115-149 PY7.sub.-- SOCMV HYPOTHETICAL 5.9 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 1-51 PY85K.sub.-- SSV1 HYPOTHETICAL PROTEIN 7 SOYBEAN CHLOROTIC MOTTLE VIRUS 56-94 PY8.sub.-- SOCMV HYPOTHETICAL 85.7 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 81-125 503-537 546-587 658-700 PYB01.sub.-- FOWPM HYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE VIRUS 46-83 PYB04.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF1 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 74-115 184-221 PYB05.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF4 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 29-70 PYB06.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF5 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 3-37 61-95 PYB07.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF6 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 115-149 PYB10.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF7 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 344-378 PYB12.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF10 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 162-253 PYB13.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF12 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 4-47 117-153 PYBL2.sub.-- EBV HYPOTHETICAL BAMHI-ORF13 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 122-163 PYDH1.sub.-- HSVS7 HYPOTHETICAL BBLF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 458-506 (HUMAN HERPESVIRUS 4) PYF30.sub.-- FOWP1 HYPOTHETICAL 24.1 KD PROTEIN IN HERPESVIRUS SAIMIRI (STRAIN 484-77) 147-188 DHFR 3'REGION PYGA1.sub.-- HSVMB HYPOTHETICAL 30.9 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 160-204 PYGA1.sub.-- HSVMM HYPOTHETICAL 23.6 KD PROTEIN MAREK'S DISEASE HERPESVIRUS 176-211 IN GLYCOPROTEI (STRAIN BC-1) (MDHV) PYH22.sub.-- VACCV HYPOTHETICAL 23.6 KD PROTEIN MAREK'S DISEASE HERPESVIRUS 176-211 IN GLYCOPROTEI (STRAIN MD5) (MDHV) PYHR3.sub.-- VACCV HYPOTHETICAL 21.7 KD HINDIII-C VACCINIA VIRUS (STRAIN WR) 34-78 95-139 PROTEIN PYKR4.sub.-- EBV HYPOTHETICAL HOST RANGE 27.4 KD VACCINIA VIRUS (STRAIN WR) 24-58 181-222 PROTEIN PYL15.sub.-- ADE41 HYPOTHETICAL BKRF4 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 16-58 (HUMAN HERPESVIRUS 4) PYLR2.sub.-- EBV HYPOTHETICAL 12.4 KD PROTEIN IN HUMAN ADENOVIRUS TYPE 41 39-81 33 KD PROTEIN PYOR1.sub.-- COYMV HYPOTHETICAL BLRF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 64-125 (HUMAN HERPESVIRUS 4) PYOR2.sub.-- COYMV HYPOTHETICAL 23 KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS 94-147 (COYMV) PYOR2.sub.-- LELV HYPOTHETICAL 15 KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS 33-77 (COYMV) PYOR3.sub.-- TTV1 HYPOTHETICAL 28.4 KD PROTEIN LELYSTAD VIRUS (LV) 100-134 PYOR5.sub.-- ADEG1 HYPOTHETICAL 6.9 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 14-54 (STRAIN KRA1) (TTV1) PYORA.sub.-- TTV1 HYPOTHETICAL 31.5 KD PROTEIN AVIAN ADENOVIRUS GAL1 70-127 (STRAIN PHELPS) (FOWL ADENOVIRU PYORD.sub.-- TTV1 HYPOTHETICAL 8.1 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 21-67 (STRAIN KRA1) (TTV1) PYORE.sub.-- TTV1 HYPOTHETICAL 15.4 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 6-51 89-130 (STRAIN KRA1) (TTV1) PYORL.sub.-- TTV1 HYPOTHETICAL 15.3 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 78-122 (STRAIN KRA1) (TTV1) PYORQ.sub.-- TTV1 HYPOTHETICAL 26.8 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 1-45 (STRAIN KRA1) (TTV1) PYORT.sub.-- TTV1 HYPOTHETICAL 7.3 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 1-43 (STRAIN KRA1) (TTV1) PYORW.sub.-- TTV1 HYPOTHETICAL 38.7 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 4-38 281-315 (STRAIN KRA1) (TTV1) PYP12.sub.-- RTBV HYPOTHETICAL 12.1 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 4-89 (STRAIN KRA1) (TTV1) PYP12.sub.-- RTBVP HYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS (RTBV) 33-72 PYP24.sub.-- RTBV HYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 33-72 (ISOLATE PHILIPPINES) (RTE PYP24.sub.-- RTBVP HYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS (RTBV) 51-101 106-157 PYP46.sub.-- RTBV HYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 51-101 106-157 (ISOLATE PHILIPPINES) (RT PYP46.sub.-- RTBVP HYPOTHETICAL P46 PROTEIN RICE TUNGRO BACILLIFORM VIRUS (RTBV) 49-111 197-231 PYP63.sub.-- NPVAC HYPOTHETICAL P46 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 49-111 197-231 (ISOLATE PHILIPPINES) (RT PYP7A.sub.-- TNVA HYPOTHETICAL PROTEIN IN P6.5 5'REGION AUTOGRAPHA CALIFORNICA NUCLEAR 32-73 POLYHEDROSIS VIRUS ( PYPOH.sub.-- NPVAC HYPOTHETICAL P7A PROTEIN TOBACCO NECROSIS VIRUS (STRAIN A) (TNV) 1-65 PYPOL.sub.-- IPNVJ HYPOTHETICAL 23.6 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 116-153 IN POLYHEDRIN 5 POLYHEDROSIS VIRUS ( PYQ1.sub.-- AMEPV HYPOTHETICAL 17.3 KD PROTEIN INFECTIOUS PANCREATIC NECROSIS VIRUS 25-66 (SEROTYPE JASPER) PYQ3.sub.-- AMEPV HYPOTHETICAL 7.6 KD PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 9-61 IN TK 5'REGION PYRF2.sub.-- HSV6G HYPOTHETICAL PROTEIN IN TK 3'REGION AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 1-57 62-96 149-183 PYRF3.sub.-- HSV6G HYPOTHETICAL PROTEIN RF2 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 193-264 PYRF4.sub.-- HSV6G HYPOTHETICAL PROTEIN RF3 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 134-175 PYRP2.sub.-- IRV6 HYPOTHETICAL PROTEIN RF4 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 252-286 404-442 PYRR1.sub.-- EBV REPETITIVE PROTEIN ORF2 CHILO IRIDESCENT VIRUS (CIV) 1-45 (INSECT IRIDESCENT VIRUS TYP PYSR1.sub.-- EBV HYPOTHETICAL BRRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 96-130 (HUMAN HERPESVIRUS 4) PYTR1.sub.-- EBV HYPOTHETICAL BSRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 98-177 (HUMAN HERPESVIRUS 4) PYUB2.sub.-- NPVOP HYPOTHETICAL BTRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 390-424 (HUMAN HERPESVIRUS 4) PYVAC.sub.-- VACCC HYPOTHETICAL 24.0 KD PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 25-69 170-204 IN UBIQUITIN 3'RE POLYHEDROSIS VIRUS PYVAG.sub.-- VACCC HYPOTHETICAL 14.4 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 29-63 PYVAH.sub.-- VACCC HYPOTHETICAL 9.3 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 3-37 PYVAN.sub.- - VACCC HYPOTHETICAL 14.5 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 78-112 PYVBH.sub.-- VACCC HYPOTHETICAL 7.9 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 23-57 PYVCC.sub.-- VACCC HYPOTHETICAL 7.4 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 5-39 PYVDB.sub.- - VACCC HYPOTHETICAL 9.2 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 11-48 PYVDB.sub.-- VACCV HYPOTHETICAL 8.5 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 29-80 PYVDC.sub.-- VACCV HYPOTHETICAL 8.5 KD PROTEIN VACCINIA VIRUS (STRAIN WR) 46-80 PYVGB.sub.-- VACCC HYPOTHETICAL 7.3 KD PROTEIN VACCINIA VIRUS (STRAIN WR) 7-41 PYVHA.sub.-- VACCC HYPOTHETICAL 8.4 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 10-51 HYPOTHETICAL 8.1 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 9-53 - 107 X 178 X 4 SEARCH MOTIF RESULTS SUMMARY (PREFERRED VIRAL SEQUENCES) PCGENE 107x178x4 All Viruses (no bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 P194K.sub.-- TRVSY POT 194 KD PRO TOBACCO RATTLE VIRUS (STRAIN SYM) 387-414 1087- 1142- 1114 1169 PAANT.sub.-- HDVAM DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAANT.sub.-- HDVD3 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAANT.sub.-- HDVTT DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAANT.sub.-- HDVM2 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAANT.sub.-- HDVS1 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 16-43 106-133 PAANT.sub.-- HDVS2 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 16-43 106-133 PAANT.sub.-- HDVWO DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAT3H.sub.-- FOWPM ANTITHROMBIN-III HOMOLOG FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 72-106 PAT11.sub.-- VACCV 94 KD A-TYPE INCLUSION PRO VACCINIA VIRUS (STRAIN WR) 14-56 67-94 424-472 570-625 PAT11.sub.-- VARV 81 KD A-TYPE INCLUSION PRO VARIOLA VIRUS 67-94 425-504 571-605 PAT12.sub.-- HSV11 ALPHA TRANS-IND FACTOR 78 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 308-335 KD PRO PAT12.sub.-- HSVIF ALPHA TRANS-IND FACTOR 77 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F) 308-335 KD PRO PAT12.sub.-- HSVEB ALPHA TRANS-IND FACTOR 82 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 294-321 KD PRO PATIN.sub.-- HSVEB ALPHA TRANS-IND PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 255-289 PATI.sub.-- COWPX A-TYPE INCLUSION PROTEIN COWPOX VIRUS 14-56 67-94 426-498 572-620 837-841 934-990 1234- 1261 PBZLF.sub.-- EBV BZLF1 TRANS-ACTIVATOR EPSTEIN-BARR VIRUS (STRAIN B95-8) 193-220 PROTEIN PCAHH.sub.-- VACCC CELL SURFACE-BINDING VACCINIA VIRUS (STRAIN COPENHAGEN) 84-111 117-144 PROTEIN PCAHH.sub.-- VACCV CELL SURFACE-BINDING VACCINIA VIRUS (STRAIN WR) 84-111 117-144 PROTEIN PCAHH.sub.-- VARV CELL SURFACE-BINDING VARIOLA VIRUS 84-111 117-144 PROTEIN PCELF.sub.-- HSVEB CELL FUSION PROTEIN EQUINE HERPESVIRUS TYPE 1 312-339 PRECURSOR (STRAINS AB4P and Ky A) PCGH2.sub.-- HSVSA CYCLIN HOMOLOG HERPESVIRUS SAIMIRI (STRAIN 11) 127-154 PCOA1.sub.-- POVHA COAT PROTEIN VP1 HAMSTER POLYOMAVIRUS 159-186 PCOA2.sub.-- BFDV COAT PROTEIN VP2 BUDGERIGAR FLEDGLING DISEASE VIRUS 160-187 PCOA2.sub.-- POVBO COAT PROTEIN VP2 BOVINE POLYOMAVIRUS 49-76 PCOA2-POVJC COAT PROTEIN VP2 POLYOMAVIRUS JC 37-64 PCOA2.sub.-- POVLY COAT PROTEIN VP2 LYMPHOTROPIC POLYOMAVIRUS 170-204 PCOA2.sub.-- POVMK COAT PROTEIN VP2 MOUSE POLYOMAVIRUS (STRAIN KILHAM) 22-49 PCOA2.sub.-- SV40 COAT PROTEIN VP2 SIMIAN VIRUS 40 178-205 PCOA3.sub.-- AAV2 PROBABLE COAT PROTEIN 3 ADENO-ASSOCIATED VIRUS 2 120-147 PCOA3-TTV1 COAT PROTEIN TP3 THERMOPROTEUS TENAS VIRUS 1 (STRAIN KRA1) 3-30 PCOAT.sub.-- ADVG COAT PROTEIN VP1 ALEUTIAN MINK DISEASE PARVOVIRUS 194-221 (STRAIN G) PCOAT.sub.-- BLRV COAT PROTEIN BEAN LEAFROLL VIRUS 96-123 PCOAT.sub.-- CAMVC COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-184) 63-90 193-220 461-488 PCOAT.sub.-- CAMVD COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 64-91 194-221 PCOAT.sub.-- CAMVE COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC) 63-90 193-220 PCOAT.sub.-- CAMVN COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 63-90 192-219 461-488 PCOAT.sub.-- CAMVS COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN 64-91 194-221 STRASBOURG) PCOAT.sub.-- CARMV COAT PROTEIN CARNATION MOTTLE VIRUS 16-43 PCOAT.sub.-- CHVP1 MAJOR CAPSID PROTEIN PARAMECIUM BURSARIA CHLORELLA VIRUS 1 41-86 PCOAT.sub.-- CNV COAT PROTEIN CUCUMBER NECROSIS VIRUS 328-362 PCOAT.sub.-- CSMV COAT PROTEIN CHLORIS STRIATE MOSAIC VIRUS 62-89 PCOAT.sub.-- CYMV COAT PROTEIN CLOVER YELLWO MOSAIC VIRUS 170-200 PCOAT.sub.-- FCVC6 COAT PROTEIN FELINE CALICIVIRUS (STRAIN CFI/68 FIV) 566-600 PCOAT.sub.-- FCVF4 COAT PROTEIN FELINE CALICIVIRUS (STRAIN JAPANESE F4) 516-543 566-600 PCOAT.sub.-- FCVF9 COAT PROTEIN FELINE CALICIVIRUS (STRAIN F9) 519-546 569-603 PCOAT.sub.-- FMVD PROBABLE COAT PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 220-247 358-385 PCOAT.sub.-- LSV COAT PROTEIN LILY SYMPTOMLESS VIRUS 32-700 246-273 PCOAT.sub.-- MISV COAT PROTEIN MISCANTHUS STREAK VIRUS 139-166 PCOAT.sub.-- ORSV COAT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 106-133 PCOAT.sub.-- PAVHB PROBABLE COAT PROTEIN VP1 HUMAN PARVOVIRUS B19 524-551 569-596 PCOAT.sub.-- POPMV COAT PROTEIN POPLAR MOSAIC VIRUS (ISOLATE ATCC PV275) 46-73 PCOAT.sub.-- SOCMV COAT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 128-162 PCOAT.sub.-- TAMV GENOME POLYPROTEIN TAMARILLO MOSAIC VIRUS 21-48 PCOAT.sub.-- TAB COAT PROTEIN TOMATO ASPERMY VIRUS 23-50 PCOAT.sub.-- TBSVB COAT PROTEIN TOMATO BUSHY STUNT VIRUS (STRAIN BS-3) 3-30 41-68 PCOAT.sub.-- TBSVC COAT PROTEIN TOMATO BUSHY STUNT VIRUS (STRAIN CHERRY) 97-134 PCOAT.sub.-- TCV COAT PROTEIN TURNIP CRINKLE VIRUS 232-259 PCOAT.sub.-- TMGMV COAT PROTEIN TOBACCO MILD GREEN MOSAIC VIRUS 104-131 PCOAT.sub.-- TMV COAT PROTEIN TOBACCO MOSAIC VIRUS (VULGARE) 104-131 PCOAT.sub.-- TMVCO COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN COWPEA) 78-132 PCOAT.sub.-- TMVDA COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN DAHLEMENSE) 104-131 PCOAT.sub.-- TMVER COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN ER) 104-131 PCOAT.sub.-- TMVO COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN O AND KOKUBU) 104-131 PCOAT.sub.-- TMVOM COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN OM) 104-131 PCOAT.sub.-- TMVTO COAT PROTEIN TOBACCO MOSAIC VIRUS (STRAIN TOMATOE/L) 104-131 PCOAT.sub.-- TNVA COAT PROTEIN TOBACCO NECROSIS VIRUS (STRAIN A) 90-117 PCOAT.sub.-- TRVPS COAT PROTEIN TOBACCO RATTLE VIRUS (STRAINS PSG and PLB) 118-145 PCOAT.sub.-- TYDVA COAT PROTEIN TOBACCO YELLOW DWARF VIRUS (STRAIN 10-37 AUSTRALIA) PCOAT.sub.-- TYMV COAT PROTEIN TURNIP YELLOW MOSAIC VIRUS 41-68 PCOAT.sub.-- TYMVA COAT PROTEIN TURNIP YELLOW MOSAIC VIRUS (AUSTRALIAN 41-68 ISOLATE) PDNB2.sub.-- ADE07 EARLY E2A DNA-BINDING HUMAN ADENOVIRUS TYPE 7 46-73 PROTEIN PDNB1.sub.-- EBV MAJOR DNA-BINDING PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 997-1004 1041- 1068 PDNB1.sub.-- HCMVA MAJOR DNA-BINDING PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 437-464 PDNB1.sub.-- HSVSA MAJOR DNA-BINDING PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 333-368 512-539 PDNB1.sub.-- MCMVS MAJOR DNA-BINDING PROTEIN MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 584-618 PDNB1.sub.-- POVJC DNA-BINDING PROTEIN POLYOMAVIRUS JC 2-29 PDNB1.sub.-- SCMVC MAJOR DNA-BINDING PROTEIN SIMIAN CYTOMEGALOVIRUS (STRAIN COLBURN) 435-462 532-559 PDNL1.sub.-- VACCC DNA LIGASE VACCINIA VIRUS (STRAIN COPENHAGEN) 104-131 172-199 358-385 PDNL1.sub.-- VACCV DNA LIGASE VACCINIA VIRUS (STRAIN WR) 104-131 172-199 358-385 PDNL1.sub.-- VARV DNA LIGASE VARIOLA VIRUS 104-131 172-199 358-385 PDPOL.sub.-- ADE12 DNA POLYMERASE HUMA ADENOVIRUS TYPE 12 403-431 PDPOL.sub.-- CBEPV DNA POLYMERASE CHORISTONEURA BIENNIS ENTOMOPOXVIRUS 23-64 202-240 PDPOL.sub.-- CHVN2 DNA POLYMERASE CHLORELLA VIRUS NY-2A 338-365 PDPOL.sub.-- CHVP1 DNA POLYMERASE PARAMECIUM BURSARIA CHLORELLA VIRUS 1 338-365 PDPOL.sub.-- FOWPV DNA POLYMERASE FOWLPOX VIRUS 17-51 370-416 621-655 772-799 PDPOL.sub.-- HCMVA DNA POLYMERASE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 753-780 PDPOL.sub.-- HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS (BROWN SHANGHAI 5-39 DUCK ISOLATE S5) PDPOL.sub.-- HPBDC DNA POLYMERASE DUCK HEPATITIS B VIRUS (STRAIN CHINA) 5-39 PDPOL.sub.-- HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS (WHITE SHANGHAI 5-39 304-331 DUCK ISOLATE S31) PDPOL.sub.-- HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS VIRUS 271-325 PDPOL.sub.-- HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS 5-39 PDPOL.sub.-- HPBVP DNA POLYMERASE HEPATITIS B VIRUS 456-483 (SUBTYPE ADW/STRAIN PHILIPPINO/PFDW294) PDPOL.sub.-- HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE ADYW) 443-470 PDPOL.sub.-- HSVI1 DNA POLYMERASE ICTALURID HERPESVIRUS 1 328-366 710-737 PDPOL.sub.-- HSVSA DNA POLYMERASE HERPESVIRUS SAIMIRI (STRAIN 11) 625-652 PDPOL.sub.-- NPVAC DNA POLYMERASE AUTOGRAPHA CALIFONICA NUCLEAR 598-643 POLYHEDROSIS VIRUS PDPOL.sub.-- NPVLD DNA POLYMERASE LYMANTRIA DISPAR MULTICAPSID NUCLEAR 357-384 POLYHEDROSIS VIRUS PDPOL.sub.-- VACCC DNA POLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN) 770-797 PDPOL.sub.-- VACCV DNA POLYMERASE VACCINIA VIRUS (STRAIN WR) 770-797 PDPOL.sub.-- VARV DNA POLYMERASE VARIOLA VIRUS 769-796 PDPOL.sub.-- WHV1 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 1 285-326 PDPOL.sub.-- WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 59 290-331 PDPOL.sub.-- WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 7 212-242 290-331 PDPOL.sub.-- WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 211-241 289-330 PDPOL.sub.-- WHV81 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 212-242 290-331 PDTXH.sub.-- CORBE DIPHTH TOXIN HOMOLOG CORYNEPHAGE BETA 516-533 CRM228 PREC PDTX.sub.-- CORBE DIPHTHERIA TOXIN PRECURSOR CORYNEPHAGE BETA 523-560 PDTX.sub.-- COROM DIPHTHERIA TOXIN PRECURSOR CORYNEPHAGE OMEGA 516-533 PDUT.sub.-- HSVE4 DEOXYU 5'-TRIPHOSPH EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 90-117 NUCHYDROLASE PDUT.sub.-- HSVSA DEOXYU 5'-TRIPHOSPH HERPESVIRUS SAIMIRI (STRAIN 11) 179-213 NUCHYDROLASE PE1BL.sub.-- ADE07 E1B PROTEIN, LARGE HUMAN ADENOVIRUS TYPE 7 126-153 T-ANTIGEN PE1BL.sub.-- ADE40 E1B PROTEIN, LARGE HUMAN ADENOVIRUS TYPE 40 136-163 T-ANTIGEN PE1BS.sub.-- ADE12 E1B PROTEIN, SMALL HUMAN ADENOVIRUS TYPE 12 3-30 T-ANTIGEN PE1BS.sub.-- ADEM1 E1B PROTEIN, SMALL MOUSE ADENOVIRUS TYPE 1 122-173 T-ANTIGEN PE314.sub.-- ADE02 EARLY E3B 14 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 2-29 PE314.sub.-- ADE07 EARYL E3 15.3 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 21-48 PE320.sub.-- ADE03 EARLY E3 20.1 KD HUMAN ADENOVIRUS TYPE 3 5-32 70-100 GLYCOPROTEIN PE320.sub.-- ADE35 EARLY E3 20.3 KD HUMAN ADENOVIRUS TYPE 35 70-107 GLYCOPROTEIN PE321.sub.-- ADE35 EARLY E3 20.6 KD HUMAN ADENOVIRUS TYPE 35 125-161 GLYCOPROTEIN PE3GL.sub.-- ADEM1 EARLY E3 17.7 KD MOUSE ADENOVIRUS TYPE1 38-66 GLYCOPROTEIN PEAR.sub.-- EBV EARLY ANTIGEN PROTEIN R EPSTEIN-BARR VIRUS (STRAIN B95-8) 55-82 PEFT1.sub.-- VARV EARLY TRANS FACTOR 70 KD VARIOLA VIRUS 307-341 470-497 SUBUNIT PENV.sub.-- AVIRE ENV POLYPROTEIN AVIAN RETICULOENDOTHELIOSIS VIRUS 420-468 PENV.sub.-- AVISN ENV POLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 6-33 426-474 PENV.sub.-- BAEVM ENV POLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 395-452 PENV.sub.-- BIV06 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 17-44 544-603 631-695 (ISOLATE 106) PENV.sub.-- BIV27 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 17-44 573-632 660-724 (ISOLATE 127) PENV.sub.-- BLVAF ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (AMERICAN 304-377 ISOLATE FLK) PENV.sub.-- BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (AUSTRALIAN 304-377 ISOLATE) PENV.sub.-- BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (AMERICAN) 304-377 ISOLATE VDM) PENV.sub.-- BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (BELGIUM 311-377 ISOLATE LB285) PENV.sub.-- BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (BELGIUM 304-377 ISOLATE LB59) PENV.sub.-- BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (JAPANESE 304-377 ISOLATE BLV-1) PENV.sub.-- CAEVG ENV POLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 165-192 (STRAIN G63) PENV.sub.-- EIAV1 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONE P3.2-1) PENV.sub.-- EIAV2 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-695 (CLONE P3.2-2) PENV.sub.-- EIAV3 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONE P3.2-3) PENV.sub.-- EIAV5 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 669-696 (CLONE P3.2-5) PENV.sub.-- EIAV9 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONE 1369) PENV.sub.-- EIAVC ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONE CL22) PENV.sub.-- EIAVW ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (STRAIN WSU5) PENV.sub.-- EIAVY ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (ISOLATE WYOMING) PENV.sub.-- FENV1 ENV POLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1 33-60 517-544 PENV.sub.-- FIVPE ENV POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS (ISOLATE 650-680 722-749 PETALUMA) PENV.sub.-- FIVSD ENV POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS (ISOLATE 639-668 720-747 SAN DIEGO) PENV.sub.-- FIVT2 ENV POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS (ISOLATE 640-679 721-748 TM2) PENV.sub.-- FLVC6 ENV POLYPROTEIN FELINE LEUKEMIA PROVIRUS (CLONE CFE-6) 509-538 PENV.sub.-- FLVGL ENV POLYPROTEIN FELINE LEUKEMIA VIRUS (STRAIN A/GLASGOW-1) 490-519 PENV.sub.-- FLVLB ENV POLYPROTEIN FELINE LEUKEMIA VIRUS (STRAIN LAMBDA-B1) 510-539 PENV.sub.-- FLVSA ENV POLYPROTEIN FELINE LEUKEMIA VIRUS (STRAIN SARMA) 487-516 PENV.sub.-- FOAMV ENV POLYPROTEIN HUMAN SPUMARETROVIRUS 14-41 318-355 866-893 PENV.sub.-- FSVGA ENV POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN 510-539 GARDNER-ARNSTEIN) PENV.sub.-- FSYGB ENV POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN GA) 490-519 PENV.sub.-- FSVSM ENV POLYPROTEIN FELINE SARCOMA VIRUS (STRAIN SM) 493-522 PENV.sub.-- GALV ENV POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 176-203 523-564 PENV.sub.-- HTL1A ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 342-376 (STRAIN ATK) PENV.sub.-- HTL1C ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 342-376 (CARIBBEAN ISOLATE) PENV.sub.-- HTL1M ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 342-376 (ISOLATE MT-2) PENV.sub.-- HTLV2 ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE II 336-370 PENV.sub.-- HV1A2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 544-592 630-682 790-825 (ARV2/SF2 ISOLATE) PENV.sub.-- HV1B1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818 (HB10 ISOLATE) PENV.sub.-- HV1B8 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 540-589 626-678 786-813 (BH8 ISOLATE) PENV.sub.-- HV1BN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 267-294 338-365 562-590 628-679 787-815 (BRAIN ISOLATE) PENV.sub.-- HV1BR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 550-599 636-688 796-823 (BRU ISOLATE) PENV.sub.-- HV1C4 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 397-424 557-606 643-695 803-835 (CDC-451 ISOLATE) PENV.sub.-- HV1EL ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 386-413 543-591 628-680 (ELI ISOLATE) PENV.sub.-- HV1H2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818 (HXB2 ISOLATE) PENV.sub.-- HV1H3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818 (HXB3 ISOLATE) PENV.sub.-- HV1J3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 350-377 556-605 642-694 802-829 (JH3 ISOLATE) PENV.sub.-- HV1JR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 336-363 622-675 783-811 (JRCSF ISOLATE) PENV.sub.-- HV1KB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 274-301 555-596 637-677 776-824 (STRAIN KB-1-GP32) PENV.sub.-- HV1MA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 547-595 633-707 794-826 (MAL ISOLATE) PENV.sub.-- HV1MF ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 543-592 629-681 789-816 (MFA ISOLATE) PENV.sub.-- HV1MN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-370 567-595 632-684 791-819 (MN ISOLATE) PENV.sub.-- HV1N5 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 326-360 (NEW YORK-5 ISOLATE) PENV.sub.-- HV1ND ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 249-290 536-583 621-673 783-813 (NDK ISOLATE) PENV.sub.-- HV1OY ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 544-593 630-704 789-820 (OYI ISOLATE) PENV.sub.-- HV1PV ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818 (PV22 ISOLATE) PENV.sub.-- HV1RH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 280-307 351-378 554-602 640-692 800-832 (RF/HAT ISOLATE) PENV.sub.-- HV1S1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 333-363 536-585 622-674 782-809 (SF162 ISOLATE) PENV.sub.-- HV1S3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 541-589 627-679 787-815 (SF33 ISOLATE) PENV.sub.-- HV1SC ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 338-365 545-593 631-683 (SC ISOLATE) PENV.sub.-- HV1W1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 338-365 545-593 631-683 791-818 (WMJ1 ISOLATE) PENV.sub.-- HV1W2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 334-361 536-584 622-674 782-809 (WMJ2 ISOLATE) PENV.sub.-- HV1Z2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 542-591 628-680 790-820 (Z2/CDC-Z34 ISOLATE) PENV.sub.-- HV1Z3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 251-292 (ZAIRE 3 ISOLATE) PENV.sub.-- HV1Z6 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 256-297 545-593 630-682 792-822 (ZAIRE 6 ISOLATE) PENV.sub.-- HV1Z8 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 266-307 573-601 634-678 797-828 (Z-84 ISOLATE) PENV.sub.-- HV1ZH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 627-666 791-823 (ZAIRE HZ321 ISOLATE) PENV.sub.-- HV2BE ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 61-88 532-591 621-648 653-697 (ISOLATE BEN) PENV.sub.-- HV2CA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 534-593 623-650 655-699 (ISOLATE CAM2) PENV.sub.-- HV2D1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 61-88 523-550 555-582 644-688 (ISOLATE D194) PENV.sub.-- HV2G1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 60-87 524-551 556-583 613-640 645-693 9SOLATE GHANA-1) PENV.sub.-- HV2NZ ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 61-88 524-551 556-583 613-640 662-689 (ISOLATE N1H-Z) PENV.sub.-- HV2RO ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 58-85 533-592 622-698 (ISOLATE ROD) PENV.sub.-- HV2S2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 442-476 527-554 559-586 648-682 (ISOLATE ST/24 1C#2) PENV.sub.-- HV2SB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 557-584 614-673 (ISOLATE SBL1SY) PENV.sub.-- HV2ST ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 442-476 527--554 559-586 648-692 (ISOLATE ST) PENV.sub.-- MCFF ENV POLYPROTEIN MINK CELL FOCUS-FORMING MURINE LEUKEMIA 473-512 VIRUS PENV.sub.-- MCFF3 ENV POLYPROTEIN MINK CELL FOCUS-FORMING MURINE LEUKEMIA 488-515 VIRUS (ISOLATE C1-3) PENV.sub.-- MLVAV ENV POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 517-544 PENV.sub.-- MLVCB ENV POLYPROTEIN CAS-BR-E MURINE LEUKEMIA VIRUS 510-539 PENV.sub.-- MLVF5 ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS (ISOLATE 57) 523-553 PENV.sub.-- MLVFF ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS (ISOLATE FB29) 523-553 PENV.sub.-- MLVFP ENV POLYPROTEIN FRIEND MURINE LEUKEMIA VIRUS (ISOLATE 523-553 PVC-211) PENV.sub.-- MLVHO ENV POLYPROTEIN HOMULV MURINE LEUKEMIA VIRUS 510-540 PENV.sub.-- MLVK1 ENV POLYPROTEIN KIRSTEN MURINE LEUKEMIA VIRUS 40-81 PENV.sub.-- MLVMO ENV POLYPROTEIN MOLONEY MURINE LEUKEMIA VIRUS 502-543 PENV.sub.-- MLVRD ENV POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 497-538 PENV.sub.-- MLVRK ENV POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS (STRAIN 497-538 KAPLAN) PENV.sub.-- MMTVB ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 458-485 562-589 PENV.sub.-- MMTVG ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 458-485 562-589 PENV.sub.-- MPMV ENV POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 422-470 PENV.sub.-- MSVFB ENV POLYPROTEIN FBJ MURINE OSTEOSARCOMA VIRUS 57-84 PENV.sub.-- OMVVS ENV POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV) 42-69 196-223 780-807 PENV.sub.-- RMCFV ENV POLYPROTEIN RAUSCHER MINK CELL FOCUS-INDUCING VIRUS 487-517 PENV.sub.-- SFV1 ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 14-41 866-901 PENV.sub.-- SFV3L ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/STRAIN LK3) 18-45 319-357 673-700 863-898 PENV.sub.-- SIVA1 ENV POLYPROTEIN SIMIAN IMMUNOFEFICIENCY VIRUS (AGM155 269-310 561-588 592-619 642-679 697-724 ISOLATE) PENV.sub.-- SIVAG ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS (AGM3) 270-301 566-593 597-624 658-685 703-730 ISOLATE) PENV.sub.-- SIVAI ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 257-291 336-372 548-603 634-708 (ISOLATE AGM/CLONE GR1-1) PENV.sub.-- SIVAT ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 3-30 268-298 590-617 651-678 (TYO-1 ISOLATE) PENV.sub.-- SIVCZ ENV POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 160-187 253-289 336-366 526-584 627-654 PENV.sub.-- SIVGB ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 8-35 158-185 589-650 784-816 (ISOLATE GB1) PENV.sub.-- SIVM1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 120-150 550-609 671-715 (MM142-83 ISOLATE) PENV.sub.-- SIVM2 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 156-215 277-289 (MM251 ISOLATE) PENV.sub.-- SIVMK ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 553-608 (K6W ISOLATE) PENV.sub.-- SIVML ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 549-608 (K78 ISOLATE) PENV.sub.-- SIVS4 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 281-308 553-612 642-669 691-718 (F236/SMH4 ISOLATE) PENV.sub.-- SIVSP ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 286-313 554-595 646-722 (PBJ/BC13 ISOLATE) PENV.sub.-- SMRVH ENV POLYPROTEIN SQUIRREL MONKEY RETROVIRUS (SMRV-H) 400-462 PENV.sub.-- SRV1 ENV POLYPROTEIN SIMIAN RETROVIRUS SRV-1 409-471 PENV.sub.-- VILV ENV POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514) 22-62 773-800 PENV.sub.-- VILV1 ENV POLYPROTEIN VISNA LENTIVIRUS 22-62 780-807 (STRAIN 1514/CLONE LV1-1KS1) PENV.sub.-- VILV2 ENV POLYPROTEIN VISNA LENTIVIRUS 22-62 782-809 (STRAIN 1514/CLONE LV1-1KS2) PETF1.sub.-- FOWP1 EARLY TRANS FACTOR FOWLPOX VIRUS (STRAIN FP-1) 190-224 70 KD SUBUNIT PETF1.sub.-- SFVKA EARLY TRANS FACTOR SHOPE FIBROMA VIRUS (STRAIN KASZA) 306-340 469-496 550-587 70 KD SUBUNIT PETF1.sub.-- VACCC EARLY TRANS FACTOR VACCINIA VIRUS (STRAIN COPENHAGEN) 307-341 470-497 70 KD SUBUNIT PETF1.sub.-- VACCV EARLY TRANS FACTOR VACCINIA VIRUS (STRAIN WR) 307-341 470-497 70 KD SUBUNIT PETF2.sub.-- VACCC EARLY TRANSCRIPTION VACCINIA VIRUS (STRAIN COPENHAGEN) 66-97 174-210 302-33 FACTOR 82 PETF2.sub.-- VARV EARLY TRANSCRIPTION VARIOLA VIRUS 66-97 174-210 302-332 FACTOR 82 PEXON.sub.-- V2VD ALKALINE EXONUCLEASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 109-139 PFIB2.sub.-- ADE40 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 179-237 PFIB2.sub.-- ADE41 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 178-216 PFIBP.sub.-- ADE02 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 2 308-335 PFIBP.sub.-- ADE40 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 324-351 446-473 PFIBP.sub.-- ADE31 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 339-366 461-488 PFIBP.sub.-- ADEB3 FIBER PROTEIN BOVINE ADENOVIRUS TYPE 3 118-145 164-191 PFIBP.sub.-- ADEM1 FIBER PROTEIN MOUSE ADENOVIRUS TYPE 1 275-305 325-352 PFOSX.sub.-- MSVFR V-FOS/FOX TRANSFORMING FBR MURINE OSTEOSARCOMA VIRUS 138-169 PROTEIN PFOS.sub.-- AVINK P55-V-FOS TRANSFORMING AVIAN RETROVIRUS NK24 116-147 PROTEIN - PFOS.sub.-- MSVFB P55-V-FOS TRANSFORMING FBJ MURINE OSTEOSARCOMA VIRUS 162-193 PROTEIN PGAG.sub.-- AVISN GAG POOLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 270-297 PGAG.sub.-- EIAVY GAG POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 144-171 (ISOLATE WYOMING) PGAG.sub.-- FOAMV GAG POLYPROTEIN HUMAN SPUMARETROVIRUS 621-648 PGAG.sub.-- GALV GAG POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 396-442 447-474 PGAG.sub.-- HV1A2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 91-118 (ARV2/SF2 ISOLATE) PGAG.sub.-- HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 91-118 (JH3 ISOLATE) PGAG.sub.-- HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-118 (MN ISOLATE) PGAG.sub.-- HV2BE GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 88-115 (ISOLATE BEN) PGAG.sub.-- HV2D1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 88-115 (ISOLATE D194) PGAG.sub.-- HV2NZ GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 88-115 (ISOLATE NIH-Z) PGAG.sub.-- HV2ST GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 88-115 (ISOLATE ST) PGAG.sub.-- IPHA RETROVIRUS-RELATED GAG HAMSTER INTRACISTERNAL A-PARTICLE 270-297 POLYPROTEI PGAG.sub.-- IPMA RETROVIRUS-RELATED GAG MOUSE INTRACISTERNAL A-PARTICLE 33-60 69-103 232-259 POLYPROTEI PGAG.sub.-- IPMAE RETROVIRUS-RELATED GAG MOUSE INTRACISTERNAL A-PARTICLE 96-130 POLYPROTEI PGAG.sub.-- MMTVB GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 84-151 156-187 PGAG.sub.-- MMTVC GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN C3H) 84-116 PGAG.sub.-- MMTVG GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 84-151 156-187 PGAG.sub.-- MPMV GAG POLYPROTEIN SIMIAN MASON-PFIZER VIRUS (MPMV) 222-260 PGAG.sub.-- SCVLA MAFOR COAT PROTEIN SACCHAROMYCES CEREVISIAE VIRUS L-A 497-531 624-651 PGAG.sub.-- SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 473-507 (ISOLATE AGM/CLONE GR1-1) PGAG.sub.-- SIVMK GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115 (K6W ISOLATE) PGAG.sub.-- SIVMS GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115 (STM ISOLATE) PGAG.sub.-- SIVS4 GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115 (F236/SMH4 ISOLATE) PGAG.sub.-- SIVSP GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115 (PBJ/BC13 ISOLATE) PGAG.sub.-- SMSAV GAG POLYPROTEIN SIMIAN SARCOMA VIRUS 397-443 PGAG.sub.-- SRV1 GAG POLYPROTEIN SIMIAN RETROVIRUS SRV-1 223-261 PHELI.sub.-- HSVEB PROBABLE HELICASE EQUINE HEPRESVIRUS TYPE 1 (STRAIN AB4P) 184-211 321-348 PHELI.sub.-- HSVSA PROBABLE HELICASE HERPESVIRUS SAIMIRI (STRAIN 11) 418-449 PHELI.sub.-- VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 490-517 701-728 PHEMA.sub.-- CVBF HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN F15) 208-242 PRECURSOR PHEMA.sub.-- CVBLY HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN LY-138) 208-242 PRECURSOR PHEMA.sub.-- CVBM HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN MEBUS) 208-242 PRECURSOR PHEMA.sub.-- CVBQ HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN QUEBEC) 208-242 PRECURSOR PHEMA.sub.-- CVHOC HEMAGGLUTININ-ESTERASE HUMAN CORONAVIRUS (STRAIN OC43) 208-242 PRECURSOR PHEMA.sub.-- IAA1C HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/A1CH1/2/68) 387-453 PHEMA.sub.-- IABAN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 24-51 371-437 A/BANGKOK/1/79 PHEMA.sub.-- IABUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/BUDGERIGAR/HOKKAIDO/1/77) PHEMA.sub.-- IACAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 9-36 A/CAMEL/MONGOLIA/82) PHEMA.sub.-- IACKA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/CHICKEN/ALABAMA/1/75) PHEMA.sub.-- IACKG HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 31-58 382-441 494-528 A/CHICKEN/GERMANY/N/49) PHEMA.sub.-- IACKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 395-426 A/CHICKEN/PENNSYLVANIA/1/83) PHEMA.sub.-- IACKQ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 396-426 A/CHICKEN/PENNSYLVANIA/1370/83) PHEMA.sub.-- IACKV HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 119-146 384-443 A/CHICKEN/VICTORIA/1/85) PHEMA.sub.-- IADA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/DUCK/ALBERTA/28/76) PHEMA.sub.-- IADA2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 423-453 499-543 A/DUCK/ALBERTA/60/76) PHEMA.sub.-- IADA3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/DUCK/ALBERTA/78/76) PHEMA.sub.-- IADA4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 418-478 A/DUCK/ALBERTA/35/76) PHEMA.sub.-- IADCZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/DUCK/CZECHOSLOVAKIA/56) PHEMA.sub.-- IADE1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-55 402-453 506-533 A/DUCK/ENGLAND/1/56) PHEMA.sub.-- IADH1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HORKKAIDO/5/77) PHEMA.sub.-- IADH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/8/80) PHEMA.sub.-- IADH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/33/80) PHEMA.sub.-- IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/7/82) PHEMA.sub.-- IADH5 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/21/82) PHEMA.sub.-- IADH6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/9/85) PHEMA.sub.-- IADH7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/10/85) PHEMA.sub.-- IADIR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 415-445 A/DUCK/IRELAND/113/83) PHEMA.sub.-- IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-56 A/DUCK/MEMPHIS/546/76) PHEMA.sub.-- IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/DUCK/MEMPHIS/928/74) PHEMA.sub.-- IADMA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 31-58 A/DUCK/MANITOBA/1/53) PHEMA.sub.-- IADNY HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-55 A/DUCK/NEW YORK/12/78) PHEMA.sub.-- LDNZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/DUCK/NEW ZEALAND/31/76) PHEMA.sub.-- IADU1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-55 A/DUCK/UKRAINE/1/60) PHEMA.sub.-- IADU3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/DUCK/UKRAINE/1/63) PHEMA.sub.-- IAEN6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 24-51 A/ENGLAND/878/69) PHEMA.sub.-- IAEN7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/ENGLAND/321/77) PHEMA.sub.-- IAFPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 177-221 384-442 A/FOWL PLAGUE VIRUS/ROSTOCK/34) PHEMA.sub.-- IAGRE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/GREY TEAL/AUSTRALIA/2/79) PHEMA.sub.-- IAGU2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 505-432 A/GULL/MARYLAND/704/77) PHEMA.sub.-- IAGUA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 504-531 A/GULL/ASTRAKHAN/227/84) PHEMA.sub.-- IAHAL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/ALGIERS/72) PHEMA.sub.-- IAHAR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/HARBIN/1/88) 29-56 PHEMA.sub.-- IAHC6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/CAMBRIDGE/1/63) PHEMA.sub.-- IAHC7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/CAMBRIDGE/1/73) PHEMA.sub.-- IAHCD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/C.DETROIT/1/64) PHEMA.sub.-- IAHDE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/DETROIT/1/64) PHEMA.sub.-- IAHFO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/FONTAINEBLEAU/76) PHEMA.sub.-- IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/KENTUCKY/2/86) PHEMA.sub.-- IAHK7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/KENTUCKY/1/87) PHEMA.sub.-- IAHLE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/LEXINGTON/1/66) PHEMA.sub.-- IAHLO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/LONDON/1416/73) PHEMA.sub.-- IAHMI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/MIAMI/1/63) PHEMA.sub.-- IAHNM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/NEW MARKET/76) PHEMA.sub.-- IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/NEW MARKET/1/77) PHEMA.sub.-- IAHPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/PRAGUE/1/56) PHEMA.sub.-- IAHRO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/ROMANIA/80) PHEMA.sub.-- IAHSA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/SANTIAGO/1/85) PHEMA.sub.-- IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/SAO PAULO/1/76) PHEMA.sub.-- IAHSW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN) 29-56 194-221 388-457 A/EQUINE/SWITZERLAND/137/72 PHEMA.sub.-- IAHTE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/TENNESSEE/5/86) PHEMA.sub.-- IAHTO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/TOKYO/71) PHEMA.sub.-- IAHUR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/URUGUAY/1/63) PHEMA.sub.-- IAJAP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 196-223 A/JAPAN/305/57) PHEMA.sub.-- IAKIE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 425-478 A/KIEV/59/79) PHEMA.sub.-- IALEN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29.56 425-478 A/LENINRAD/54/1) PHEMA.sub.-- IAMAA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 380-450 A/MALLARD/ASTRAKHAN/244/82) PHEMA.sub.-- IAMAB HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 385-455 A/MALLARD/ASTRAKHAN/263/82) PHEMA.sub.-- IAMAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/MALLARD/NEW YORK/6874/78) PHEMA.sub.-- IAME1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/MEMPHIS/1/71) PHEMA.sub.-- IAME2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/MEMPHIS/102/72) PHEMA.sub.-- IAME6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 24-51 371-437 A/MEMPHIS/6/86) PHEMA.sub.-- IAMIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 31-58 382-441 A/MINK/SWEDEN/84) PHEMA.sub.-- IANT6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/NT/60/68) PHEMA.sub.-- IAP1L HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 505-534 A/PILOT WHALE/MAINE/328/84) PHEMA.sub.-- IAPUE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 425-478 A/PUETRO RICO/8/34) PHEMA.sub.-- IAQU7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 24-51 A/QU/7/70) PHEMA.sub.-- IARUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/RUDDY TURNSTONE/NEW JERSEY/47/85) PHEMA.sub.-- IASE2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/SEAL/MASSACHUSETTS/133/82) PHEMA.sub.-- IASH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 28-56 150-187 506-547 A/SHEARWATER/AUSTRALIA/72) PHEMA.sub.-- IASTA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 119-146 384-443 A/STARLING/VICTORIA/5156/85) PHEMA.sub.-- IATA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 A/TAIWAN/1/86) PHEMA.sub.-- IATK1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 415-445 A/TURKEY/IRELAND/1378/83) PHEMA.sub.-- IATKM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/TURKEY/MINNESOTA/833/80) PHEMA.sub.-- IATKO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 507-534 A/TURKEY/ONTARIO/7732/66) PHEMA.sub.-- IATKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 424-454 493-539 A/TURKEY/ONTARIO/6118/68) PHEMA.sub.-- IATKR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 32-62 194-221 381-422 A/TURKEY/OREGON/71) PHEMA.sub.-- IATKW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 419-449 500-536 A/TURKEY/WISCONSIN/1/66) PHEMA.sub.-- IATRA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-55 A/TERN/AUSTRALIA/G70C/75) PHEMA.sub.-- IAUDO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/UDORN/307/72) PHEMA.sub.-- IAUSS HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 29-56 425-478 PHEMA.sub.-- IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 41-68 388-454 A/VICOTRIA/3/75) PHEMA.sub.-- IAWIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 424-477 A/WILSON-SMITH/33) PHEMA.sub.-- IAXIA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 A/XIANFENG/3/89) PHEMA.sub.-- IAZCO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453 A/SWINE/COLORADO/1/77) PHEMA.sub.-- IAZH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/SWINE/HONG KONG/81/78) PHEMA.sub.-- IAZH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/SWINE/HONG KONG/126/82) PHEMA.sub.-- IAZIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 418-4787 506-547 A/SWINE/INDIANA/1726/88) PHEMA.sub.-- IAZNJ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 418-478 506-547 A/SWINE/NEW JERSEY/11/76) PHEMA.sub.-- IAZUK HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/SWINE/UKKEL/1/84) PHEMA.sub.-- INBBE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/BEIJING/1/87) 400-431 439-483 PHEMA.sub.-- INBBO HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAINB/BONN/43) 390-421 429-473 PHEMA.sub.-- INBEN HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 398-429 437-481 B/ENGLAND/222/82) PHEMA.sub.-- INBHK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 391-418 429-473 B/HONG KONG/8/73) PHEMA.sub.-- INBLE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/LEE/40) 399-430 438-482 PHEMA.sub.-- INBMD HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 389-420 428-472 B/MARYLAND/59) PHEMA.sub.-- INBME HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 393-424 432-476 B/MEMPHIS/6/86) PHEMA.sub.-- INBOR HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 398-429 437-481 B/OREGON/5/80) PHEMA.sub.-- ONBS1 HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 398-429 437-481 B/SINGAPORE/222/79) PHEMA.sub.-- INBUS HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 391-422 430-474 B/USSR/100/83) PHEMA.sub.-- INBV1 HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 393-424 432-476 B/VICTORIA/3/85) PHEMA.sub.-- INBVK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 400-431 439-483 B/VICTORIA/2/87) PHEMA.sub.-- INCCA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 495-571 C/CALIFORNIA/78) PHEMA.sub.-- INCEN HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 483-559 C/ENGLAND/892/83) PHEMA.sub.-- INCGL HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 483-559 C/GREAT LAKES/1167/54) PHEMA.sub.-- INCHY HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 482-558 C/HYOGO/1/83) PHEMA.sub.-- INCJH HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 496-572 C/JOHANNESBURG/1/66) PHEMA.sub.-- INCKY HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 482-558 (STRAIN C/KYOTO/41/82) PHEMA.sub.-- INCM1 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 482-558 (STRAIN C/MISSISSIPPI/80) PHEMA.sub.-- INCNA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 482-558 (STRAIN C/NARA/82) PHEMA.sub.-- INCP1 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/PIG/BEIJING/10/81) PHEMA.sub.-- INCP2 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/PIG/BEIJING/115/81) PHEMA.sub.-- INCP3 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/PIG/BEIJING/439/82) PHEMA.sub.-- INCTA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/TAYLOR/1233/47) PHEMA.sub.-- INCYA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/YAMAGATA/1081) PHEMA.sub.-- NDVA HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN AUSTRALIA-VICTORIA/32) PHEMA.sub.-- NDVB HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN BEAUDETTE C/45) PHEMA.sub.-- NDVD HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN D26/76) PHEMA.sub.-- NDVH HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN B1-HITCHNER/47) PHEMA.sub.-- NDVI HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN ITLAIEN/45) PHEMA.sub.-- NDVM HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN MIYADERA/51) PHEMA.sub.-- NDVQ HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN QUEENSLAND/66) PHEMA.sub.-- NDVTG HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN TEXAS B.B./48) PHEMA.sub.-- NDVU HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN ULSTER/67) PHEMA.sub.-- PHODV HEMAGGLUTININ- PHOCINE DISTEMPER VIRUS 39-66 46-73 NEURAMINIDASE PHEMA.sub.-- PI1HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 1 VIRUS 79-110 366-393 NEURAMINIDASE (STRAIN WASHINGTON/1957) PHEMA.sub.-- PI3B HEMAGGLUTININ- BOVINE PARAINFLUENZA 3 VIRUS 66-93 NEURAMINIDASE PHEMA.sub.-- PI3H4 HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN NIH 47885) PHEMA.sub.-- PI3HA HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN AUS/124854/74) PHEMA.sub.-- PI3HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-76 NEURAMINIDASE (STRAIN TEX/545/80) PHEMA.sub.-- PI3HU HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 23-70 NEURAMINIDASE (STRAIN TEX/9305/82) PHEMA.sub.-- PI3HV HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN TEX/12677/83) PHEMA.sub.-- PI3HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN WASH/641/79) PHEMA.sub.-- PI3HX HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN WASH/1511/73) PHEMA.sub.-- RACVI HEMAGGLUTININ PRECURSOR RACCOON POXVIRUS 166-214 256-283 PHEMA.sub.-- SEND5 HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 79-106 NEURAMINIDASE PHEMA.sub.-- SENDF HEMAGGLUTININ- SENDAI VIRUS (STRAIN FUSHIMI) 79-106 NEURAMINIDASE PHEMA.sub.-- SENDH HEMAGGLUTININ- SENDAI VIRUS (STRAIN HARRIS) 79-106 NEURAMINIDASE PHEMA.sub.-- SENDJ HEMAGGLUTININ- SENDAI VIRUS (STRAIN HVJ) 79-106 NEURAMINIDASE PHEMA.sub.-- SENDZ HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z) 79-106 NEURAMINIDASE PHEMA.sub.-- SV41 HEMAGGLUTININ- SIMIAN VIRUS 41 22-52 394-421 NEURAMINIDASE PHEMA.sub.-- VACCC HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 119-146 175-202 216-243 PHEMA.sub.-- VACCI HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN IHD-J) 109-146 175-202 216-243 PHEMA.sub.-- VACCT HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN TIAN TAN) 119-146 175-202 216-243 PHEMA.sub.-- VACCV HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN WR) 109-146 175-202 215-242 PHEMA.sub.-- VARV HEMAGGLUTININ PRECURSOR VARIOLA VIRUS 111-148 177-211 213-244 PHEX9.sub.-- ADE02 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 2 100-134 PHEX9.sub.-- ADE05 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 5 100-134 PHEX9.sub.-- ADE07 HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPES 3 and 7 97-127 PHEX9.sub.-- ADE02 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 2 146-173 359-386 433-460 PHEX9.sub.-- ADE05 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 5 348-375 PHEX9.sub.-- ADE40 HEXON PROTEIN HUMAN ADENOVIRUS TYPE 40 396-423 PHEX9.sub.-- ADEB3 HEXON PROTEIN BOVINE ADENOVIRUS TYPE 3 305-338 PHI38.sub.-- COWPX HEMORRHAGE-INDUCING COWPOX VIRUS 28-55 38 KD PROTEIN PHRG.sub.-- COWPX HOST RANGE PROTEIN COWPOX VIRUS 462-489 PI196.sub.-- ASFB7 LATE PROTEIN I196L AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 12-43 PI226.sub.-- ASFB7 LATE PROTEIN I226R AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 113-147 PIBMP.sub.-- CAMV4 INCLUSION BODY MATRIX CAULIFLOWER MOSAIC VIRUS (STRAIN D4) 17-44 PROTEIN PIBMP.sub.-- CMAVD INCLUSION BODY MATRIX CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 17-44 PROTEIN PIBMP.sub.-- CAMVP INCLUSION BODY MATRIX CAULIFLOWER MOSAIC VIRUS (STRAIN PV147) 38-410 PROTEIN PIBMP.sub.-- CERV INCLUSION BODY MATRIX CARNATION ETCHED RING VIRUS 6-33 PROTEIN PIBMP.sub.-- FMVD INCLUSION BODY MATRIX FIGWORT MOSAIC VIRUS (STRAIN DXS)/ 372-407 PROTEIN PIBMP.sub.-- SOCMV INCLUSION BODY MATRIX SOYBEAN CHLOROTIC MOTTLE VIRUS 3-48 331-358 PROTEIN PIC18.sub.-- HCMVA PROB PROC & TRANSPORT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 294-324 PRO UL56 PIC18.sub.-- HSVSA PROBABLE PROC & TRANSPORT HERPESVIRUS SAIMIRI (STRAIN 11) 58-85 482-522 PRO PIC18.sub.-- MCMVS PROB PROC & TRANSPORT MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 661-691 PRO PIE63.sub.-- HSV11 TRANSCRIPTIONAL REGULATOR HERPES SIMPLEX VIRUS (TYPE 1/STAIN 17) 248-275 IE63 PIE68.sub.-- HSV11 IMMEDIATE-EARLY PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 40-67 IE68 PIE68.sub.-- HSVSA IMMEDIATE-EARLY PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 48-78 PIR05.sub.-- HCMVA HYPOTHETICAL PROTEIN IRL5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 22-49 PIR12.sub.-- HCMVA HYPOTHETICAL PROTEIN IRL12 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 74-162 PIR13.sub.-- HCMVA HYPOTHETICAL PROTEIN IRL13 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 31-62 PKFES.sub.-- FSVGA TYROSINE KINASE TRANSF FELINE SARCOMA VIRUS (STRAIN 106-150 PROTEIN FES GARDNER-ARNSTEIN) PKFGR.sub.-- FSVGR TYROSINE KINASE TRANSF FELINE SARCOMA VIRUS (STRAIN 218-252 PROTEIN FGR GRADNER-RASHEED) PKFMS.sub.-- FSVMD FMS TYROSINE KINASE TRANSF FILINE SARCOMA VIRUS (STRAIN 327-362 PROTEIN MCDONOUGH) PKFPS.sub.-- FUJSV TYROSINE KINASE TRANSF FUJINAMI SARCOMA VIRUS 155-243 149-397 PROTEIN FPS PKITH.sub.-- AMEPV THYMIDINE KINASE AMSACTA MOOREI ENTOMOPOXVIRUS 47-84 PKITH.sub.-- CAPVK THYMIDINE KINASE CAPRIPOXVIRUS (STRAIN KS-1) 41-68 PKITH.sub.-- HSVSA THYMIDINE KINASE HERPESVIRUS SAIMIRI (STRAIN 11) 340-386 PKITH.sub.-- ILTVT THYMIDINE KINASE INFECTIOUS LARYNGOTRACHEITIS VIRUS 334-361 (STRAIN THORNE V882) PKR74.sub.-- HSVI1 GENE 74 PROTEIN KINASE ICTALURID HERPESVIRUS 1 491-518 PKRB1.sub.-- VACCC 30 KD PROTEIN KINASE VACCINIA VIRUS (STRAIN COPENHAGEN) 141-168 HOMOLOG PKRB1.sub.-- VACCV 30 KD PROTEIN KINASE VACCINIA VIRUS (STRAIN WR) 141-168 HOMOLOG PKRB2.sub.-- VACCC POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STRAIN COPENHAGEN) 147-174 PKRB2.sub.-- VACCV POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STAIN WR) 147-174 PKRF1.sub.-- VARV POSSIBLE PROTEIN KINASE F10 VARIOLA VIRUS 47-74 PKROS.sub.-- AVISU ROS TYROSINE KINASE AVIAN SARCOMA VIRUS (STRAIN UR2) 111-138 TRANSF PROTEIN PKRYK.sub.-- AVIR3 TYROSINE KINASE TRANSF AVIAN RETROVIRUS RPL30 22-49 PROTEIN RYK PKYES.sub.-- AVISY TYROSINE KINASE TRANSF AVIAN SARCOMA VIRUS (STRAIN Y73) 199-233 PROTEIN YES PL100.sub.-- ADE02 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 386-413 PL100.sub.-- ADE05 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 386-413 PL100.sub.-- ADE40 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 40 191-231 PL100.sub.-- ADE41 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 41 206-233 PLMP1.sub.-- EBV LATENT MEMBRANE PROTEIN 1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 148-175 PLMP1.sub.-- EBVC LATENT MEMBRANE PROTEIN 1 EPSTEIN-BARR VIRUS (STRAIN CAO) 148-175 PLMP1.sub.-- EBVR LATENT MEMBRANE PROTEIN 1 EPSTEIN-BARR VIRUS (STRAIN RAJI) 148-175 PLMP2.sub.-- EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 294-321 PMCEL.sub.-- SFVKA MRNA CAPPING ENZYME, SHOPE FIBROMA VIRUS (STRAIN KASZA) 54-156 289-316 497-524 622-656 LARGE SUBUNI PMCEL.sub.-- VCCC MRNA CAPPING ENZYME, VACCINIA VIRUS (STRAIN COPENHAGEN) 85-112 291-318 630-657 LARGE SUBUNI PMCEL.sub.-- VACCV MRNA CAPPING ENZYME, VACCINIA VIRUS (STRAIN WR) 85-112 291-318 630-657 LARGE SUBUNI PMCEL.sub.-- VARV MRNA CAPPING ENZYME, VARIOLA VIRUS 85-112 291-318 630-657 LARGE SUBUNI PMCE.sub.-- ASFB7 MRNA CAPPING ENZYME AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 379-313 PMOVP.sub.-- CGMVS MOVEMENT PROTEIN CUCUMBER GREEN MOTTLE MOSAIC VIRUS 170-197 (WATERMELON STRAIN W) PMOVP.sub.-- CGMVW MOVEMENT PROTEIN CUCUMBER GREEN MOTTLE MOSAIC VIRUS 170-197 (WATERMELON STRAIN SH) PMOVP.sub.-- ORSV MOVEMENT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 53-90 PMOVP.sub.-- TOMVA MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LIIA) 46-80 PMOVP.sub.-- TOMVL MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LII) 46-80 PMTC1.sub.-- CHVN1 MODIFICATION METHYLASE CHLORELLA VIRUS NC-1A 143-170 229-256 CVIBI PMTC2.sub.-- CHVP1 MODIFICATION METHYLASE PARAMECIUM BURSARIA CHLORELLA VIRUS 1 4-31 130-172 CVIAII PMYC.sub.-- AVIM2 MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS CMII 232-266 375-402 PMYC.sub.-- AVIMC MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS MC29 232-267 376-403 PMYC.sub.-- AVIMD MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS HBI 232-267 376-403 PMYC.sub.-- AVIME MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS MH2E21 239-268 377-404 PMYC.sub.-- AVIOK MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS OK10 227-261 370-397 PMYC.sub.-- FLV MYC TRANSFORMING PROTEIN FELINE LEUKEMIA VIRUS 393-420 PMYC.sub.-- FLVTT MYC TRANSFORMING PROTEIN FELINE LEUKEMIA PROVIRUS FTT 393-420 PNCAP.sub.-- BEV NUCLEOCAPSID PROTEIN BERNE VIRUS 49-76 129-156 PNCAP.sub.-- BUNLC NUCLEOCAPSID PROTEIN BUNYAVIRUS LA CROSSE 85-112 PNCAP.sub.-- BUNSH NUCLEOCAPSID PROTEIN BUNYAVIRUS SNOWSHOE HARE 96-123 PNCAP.sub.-- BUNYW NUCLEOCAPSID PROTEIN BUNYAMWERA VIRUS 48-75 189-220 PNCAP.sub.-- CCHFV NUCLEOCAPSID PROTEIN CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS 223-271 (ISOLATE C68031) PNCAP.sub.-- CDVO NUCLEOCAPSID PROTEIN CANINE DISTEMPER VIRUS (STRAIN 140-174 ONDERSTEPOORT) PNCAP.sub.-- CHAV NUCLEOCAPSID PROTEIN CHANDIPURA VIRUS (STRAIN 1653514) 40-74 PNCAP.sub.-- CVCAE NUCLEOCAPSID PROTEIN CANINE ENTERIC CORONA VIRUS (STRAIN K378) 191-227 PNCAP.sub.-- CVPPU NUCLEOCAPSID PROTEIN PORCINE TRANSMISSIBLE GASTROENTERITIS 191-227 CORONAVIRUS (STRAIN PURD PNCAP.sub.-- CVPR8 NUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 191-227 (STRAIN 86/137004/BRITISH ISOLAT PNCAP.sub.-- CVPRM NUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 191-227 (STRAIN RM4) PNCAP.sub.-- DUGBV NUCLEOCAPSID PROTEIN DUGBE VIRUS 238-265 PNCAP.sub.-- FIPV NUCLEOCAPSID PROTEIN FELINE INFECTIOUS PERITONITIS VIRUS 182-209 (STRAIN 79-1146) PNCAP.sub.-- HAZVJ NUCLEOCAPSID PROTEIN HAZARA VIRUS (ISOLATE JC280) 6-33 256-283 PNCAP.sub.-- HRSV1 NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 4-31 74-108 112-141 (SUBGROUP B/STRAIN 18537) PNCAP.sub.-- HRSVA NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 4-31 (STRAIN A2) PNCAP.sub.-- LASSG NUCLEOCAPSID PROTEIN LASSA VIRUS (STRAIN GA391) 64-99 147-174 PNCAP.sub.-- LASSJ NUCLEOCAPSID PROTEIN LASSA VIRUS (STRAIN JOSIAH) 64-99 467-504 PNCAP.sub.-- LYCVA NUCLEOCAPSID PROTEIN LYMPHOCYTIC CHORIOMENINGITIS VIRUS 64-97 (STRAIN ARMSTRONG) PNCAP.sub.-- MAGV NUCLEOCAPSID PROTEIN MAGUARI VIRUS 41-68 192-219 PNCAP.sub.-- MOPEI NUCLEOCAPSID PROTEIN MOPEIA VIRUS 64-99 PNCAP.sub.-- PI1HC NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 377-404 455-482 PNCAP.sub.-- PI1HW NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 377-404 444-488 (STRAIN WASHINGTON/1957) PNCAP.sub.-- PI3H4 NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 3 VIRUS 376-403 (STRAIN N1H) 47885 PNCAP.sub.-- PTPV NUCLEOCAPSID PROTEIN PUNTA TORO PHLEBOVIRUS 3-30 PNCAP.sub.-- PUUMH NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN HALLNAS B1) 2-29 PNCAP.sub.-- PUUMS NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN SOTKAMO) 2-29 PNCAP.sub.-- PVM NUCLEOCAPSID PROTEIN PNEUMONIA VIRUS OF MICE 93-120 PNCAP.sub.-- RABVA NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN AVO1) 133-167 PNCAP.sub.-- RABVP NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN PV) 133-167 PNCAP.sub.-- RABVS NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN SAD B19) 133-167 PNCAP.sub.-- SEND5 NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 363-404 PNCAP.sub.-- SENDE NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN ENDERS) 363-404 PNCAP.sub.-- SENDZ NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z) 363-404 PNCAP.sub.-- SFSV NUCLEOCAPSID PROTEIN SANDFLY FEVER SICILIAN VIRUS 4-31 PNCAP.sub.-- SV41 NUCLEOCAPSID PROTEIN SIMIAN VIRUS 41 507-534 PNCAP.sub.-- TACV NUCLEOCAPSID PROTEIN TACARIBE VIRUS 50-77 PNCAP.sub.-- TOSV NUCLEOCAPSID PROTEIN TOSCANA VIRU 6-33 PNCAP.sub.-- UUK NUCLEOCAPSID PROTEIN UUKUNIEMI VIRUS 68-102 PNCAP.sub.-- VHSV0 NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 284-314 (STRAIN 07-71) PNCAP.sub.-- VHSVM NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA VIRUS 149-176 284-314 (STRAIN MAKAH) PNCAP.sub.-- VSVIG NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS (SEROTYPE) 56-83 INDIANA/STRAIN GLASGOW PNCAP.sub.-- VSVJO NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS (SEROTYPE 67-94 338-365 NEW) JERSEY/STRAIN OGDEN PNCAP.sub.-- VSVSJ NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS 56-83 (STRAIN SAN JUAN) PNEF.sub.-- HV1EL NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 81-119 (ELLI ISOLATE) PNEF.sub.-- HV1ND NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 81-119 (NDK ISOLATE) PNEF.sub.-- HV1Z6 NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 82-124 (ZAIRE 6 ISOLATE) PNEF.sub.-- SIVAI NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 96-137 (ISOLATE AGM/CLONE GRI-1) PNRAM.sub.-- IABDA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 47-81 A/BLACK DUCK/AUSTRALIA/702/78) PNRAM.sub.-- IACAONEURAMINIDASE INFLUENZA A VIRUS (STRAIN 33-64 A/CAMEL/MONGOLIA/82 PNRAM.sub.-- IACHI NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/CHILE/1/83) 16-43 50-91 PNRAM.sub.-- IADA1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 51-81 A/DUCK/ALBERTA/28/76) PNRAM.sub.-- IADGE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 21-48 A/CUCK/GERMANY/49) PNRAM.sub.-- IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 10-48 52-80 197-224 A/FOWL PLAGUE VIRUS/WEYBRIDGE) PNRAM.sub.-- IAHCO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 197-224 386-412 A/EQUINE/COR/16/74) PNRAM.sub.-- IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 5-44 46-76 364-400 A/EQUINE/KENTUCKY/1/81) PNRAM.sub.-- IAKIE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/KIEV/59/79) 50-81 PNRAM.sub.-- IALEN NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 50-81 A/LENINGRAD/54/1) PNRAM.sub.-- IAME1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 16-43 50-81 A/MEMPHIS/1/71H-A/BELLAMY/42N) PNRAM.sub.-- IAPAR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 15-43 50-81 A/PARROT/ULSTER/73) PNRAM.sub.-- IAPUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 16-43 A/PUERTO RICO/8/34) PNRAM.sub.-- IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49-88 A/RUDDY TURNSTONE/NEW JERSEY/60/85) PNRAM.sub.-- IATRA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49-82 A/TERN/AUSTRALIA/G70C/75) PNRAM.sub.-- IAUSS NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 50-81 PNRAM.sub.-- IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49-88 A/WHALE/MAINE/1/84) PNRAM.sub.-- IAWIL NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 16-43 A/WILSON-SMITH/33) PNRAM.sub.-- INBLE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/LEE/40) 4-35 PNS1.sub.-- SIDEV PROB NONSTRUC PRO BOMBYX DENSONUCLEOSIS VIRUS 283-310 PRECURSOR PNS2.sub.-- SIDEV PROB NONSTRUC PRO BOMBYX DENSONUCLEOSIS VIRUS 42-69 PRECURSOR PNSS.sub.-- INSVN NON-STRUCTURAL PROTEIN IMPATIENS NECROTIC SPOT VIRUS 95-122 (STRAIN NL-07) PNAA.sub.-- RAQCV NON-STUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS 5-32 432-462 (BRAZILIAN ISOLATE CPNH1/BR-01) PNSS.sub.-- TSWVL NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS (STRAIN L3) 5-32 PNTP1.sub.-- AMEPV NUCLEOSIDE TRIPHOS- AMSACTA MOOREI ENTOMOPOXVIRUS 28-69 PHATASE I PNTP1.sub.-- CBEPV NUCLEOSIDE TRIPHOS- CHORISTONEURA BIENNIS ENTOMOPOXVIRUS 122-166 347-374 524-551 PHATASE I PNTP1.sub.-- VACCC NUCLEOSIDE TRIPHOS- VACCINIA VIRUS (STRAIN COPENHAGEN) 65-92 394-421 514-587 PHATASE I PNTP1.sub.-- VACCV NUCLEOSIDE TRIPHOS- VACCINIA VIRUS (STRAIN WR) 65-92 394-421 514-587 PHATASE I PNTP1.sub.-- VARV NUCLEOSIDE TRIPHOS- VARIOLA VIRUS 300-327 420-447 455-493 PHATASE I PP100.sub.-- HSV6U MAJOR ANTIGENIC STRUCTL HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 81-108 189-216 688-715 785-812 PROTEIN UGANDA-1102) PPAP1.sub.-- VACCC POLY(A) POL CATALYTIC VACCINIA VIRUS (STRAIN COPENHAGEN) 88-115 SUBUNIT PPAP1.sub.-- VACCV POLY(A) POL CATALYTIC VACCINIA VIRUS (STRAIN WR) 88-115 SUBUNIT PPAP1.sub.-- VARV POLY(A) POL CATALYTIC VARIOLA VIRUS 88-115 SUBUNIT PPAP2.sub.-- CAPVK POLY(A) POL REG SUBUNIT CARPRIPOXVIRUS (STAIN KS-1) 118-145 PPAP2.sub.-- FOWPV POLY(A) POL REG SUBUNIT FOWLPOX VIRUS 27-54 PPE12.sub.-- NPVAC 12.1 KD PROTEIN IN PE AUTOGRAPHA CALIFORNICA NUCLEAR 61-105 5'REGION POLYHEDROSIS VIRUS PPE12.sub.-- NPVOP 11.5 KD PROTEIN IN P26 ORGYIA PSEUDOTSUGATA MULTICAPSID 61-95 5'REGION POLYHEDROSIS VIRUS PPE38.sub.-- INPVAC MAJOR IMMEDIATE EARLY AUTOGRAPHA CALIFORNICA NUCLEAR 204-248 PROTEIN POLYHEDROSIS VIRUS 204-248 PPE48.sub.-- NPVAC 48.3 KD IN PE-P26 AUTOGRAPHA CALIFORNICA NUCLEAR 4-38 51-78 INTERGENIC REGION POLYHEDROSIS VIRUS PPEN3.sub.-- ADEGX PENTON PROTEIN AVIAN ADENOVIRUS GAL10 (STRAIN SA2) 96-123 PPOL1.sub.-- BAYMG GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 1272- 1775- 2236- (GERMAN ISOLATE) 1299 1802 2263 PPOL1.sub.-- BAYMJ GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 1774- 2234- (JAPANESE STRAIN II-1) 1801 2261 PPOL1.sub.-- GCMV RNA1 POLYPROTEIN HUNGARIAN GRAPEVINE CHROME 481-508 1909- MOSAIC VIRUS 1941 PPOL1.sub.-- GFLV RNA1 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 180-197 636-677 958-985 1161- 1195 PPOL1.sub.-- TBRVS RNA1 POLYPROTEIN TOMATO BLACK RING VIRUS (STRAIN S) 1096- 1123 PPOL2.sub.-- BAYMG GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 240-281 801-828 (GERMAN ISOLATE) PPOL2.sub.-- BAYMJ GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 240-267 801-828 (JAPANESE STRAIN II-1) PPOL2.sub.-- GCMV RNA2 POLYPROTEIN HUNGARIAN GRAPEVINE CHROME MOSAIC VIRUS 11-38 PPOL2.sub.-- GFLV RNA2 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 549-576 PPOL2.sub.-- TRSVR RNA2 POLYPROTEIN TOMATO RINGSPOT VIRUS 982- (ISOLATE RASPBERRY) 1009 PPOLG.sub.-- BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS (STRAIN VG-5-27) 17-44 1030- 1145- 1057 1172 PPOLG.sub.-- BVDVN GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS (ISOLATE NADL) 629-660 1082- 1303- 2233- 2476- 2609- 3613- 1112 1330 2261 2503 2636 3642 PPOLG.sub.-- BVDVS GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS (STRAIN SD-1) 1303- 2143- 2519- 2802- 3523- 1333 2171 2546 2829 3550 PPOLG.sub.-- BYMV GENOME POLYPROTEIN BEAN YELLOW MOSAIC VIRUS 96-123 PPOLG.sub.-- COXA2 GENOME POLYPROTEIN COXSACKIE VIRUS A21 (STRAIN COE) 7-43 664-694 1062- 1900- 1099 1930 PPOLG.sub.-- COXA9 GENOME POLYPROTEIN COXSACKIE VIRUS A9 (STRAIN GR1GGS) 1040- 1076 PPOLG.sub.-- COXB1 GENOME POLYPROTEIN COXSACKIE VIRUS B1 645-672 841-868 1021- 1057 PPOLG.sub.-- COXB3 GENOME POLYPROTEIN COXSACKIE VIRUS B3 1024- 1881 1060 1908 PPOLG.sub.-- COXB4 GENOME POLYPROTEIN COXSACKIE VIRUS B4 644-673 1022- 1058 PPOLG.sub.-- COXB5 GENOME POLYPROTEIN COXSACKIE VIRUS B5 1024- 1060 PPOLG.sub.-- CYVV GENOME POLYPROTEIN CLOVER YELLOW VEIN VIRUS 120-154 PPOLG.sub.-- DEN1S GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN SINGAPORE S275/90) 1858- 2890- 2989- 1885 2935 3016 PPOLG.sub.-- DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681) 1544- 1858- 2908- 2982- 3117- 1571 1885 2935 3016 3147 PPOLG.sub.-- DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681-PDK53) 1544- 1858- 2485- 2908- 2982- 3117- 1571 1885 2519 2935 3016 3147 PPOLG.sub.-- DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN JAMAICA) 1544- 1858- 2908- 3117- 3346- 1571 1885 2935 3147 3373 PPOLG.sub.-- DEN2P GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PR159/S1) 1544-1858- 2905- 2979- 3114- 3343- 1571 1885 2932 3013 3144 3370 PPOLG.sub.-- DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TONGA 1974) 1134- 1448- 1161 1475 PPOLG.sub.-- DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 837-864 1542- 1857- 2994- 2980- 3345- 1569 1884 2521 3014 3372 PPOLG.sub.-- DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 2885- 2977- 3342- 2930 3011 3369 PPOLG.sub.-- EC11G GENOME POLYPROTEIN ECHOVIRUS 11 (STRAIN GREGORY) 213-249 PPOLG.sub.-- EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 70-018 1484- 1522- 1518 1563 PPOLG.sub.-- EMCVB GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 70-97 1486- 1524- (STRAIN EMC-B NONDIABETOGENIC) 1520 1565 PPOLG.sub.-- EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 70-97 1486- 1524- (STRAIN EMC-D DIABETOGENIC) 1520 1565 PPOLG.sub.-- ENMG3 GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 70-108 (STRAIN 37A) PPOLG.sub.-- ENMGO GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 3-41 PPOLG.sub.-- FMDV1 GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 302-329 1119- (STRAIN A10-61) 1146 PPOLG.sub.-- FMDVA GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 301-328 1119- (STRAIN A12) 1146 PPOLG.sub.-- FMDVO GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 1119- (STRAINS O1K AND O1BFS) 1146 PPOLG.sub.-- FMDVS GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 101-128 (STRAIN C1-SANTA PAU [C-58]) PPOLG.sub.-- HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 702-729 PPOLG.sub.-- HCVA GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN ALFORT) 699-726 1195- 1303- 1434- 3068- 3406- 1232 1333 1461 3095 3440 PPOLG.sub.-- HCVB GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN BRESCIA) 699-726 1195- 3068- 3406- 3532- 1232 3095 3440 3559 PPOLG.sub.-- HCVBK GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE BK) 702-729 1045- 1072 PPOLG.sub.-- HCVH GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) 702-729 1045- 1072 PPOLG.sub.-- HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J6) 374-401 2089- 2116 PPOLG.sub.-- HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J8) 1049- 2089- 1076 2116 PPOLG.sub.-- HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE JAPANESE) 378-405 702-729 1045- 1072 PPOLG.sub.-- HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-JT) 702-729 1045- 1072 PPOLG.sub.-- HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE TAIWAN) 702-729 1045- 1072 PPOLG.sub.-- HPAV2 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 24A) 203-237 1021- 1117- 1454- 1048 1149 1481 PPOLG.sub.-- HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 43C) 203-237 1021- 1117- 1454- 1048 1149 1481 PPOLG.sub.-- HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 18F) 203-237 1021- 1117- 1454- 1048 1149 1481 PPOLG.sub.-- HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN CR326) 203-237 PPOLG.sub.-- HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN GA76) 182-216 PPOLG.sub.-- HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN HM-175) 203-237 1021- 1103- 1048 1149 PPOLG.sub.-- HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN LA) 203-237 1021- 1103- 1048 1149 PPOLG.sub.-- HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN MBB) 203-237 1021- 1103- 1048 1149 PPOLG.sub.-- HPAVS GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS (STRAIN AGM-27) 207-241 1025- 1115- 1052 1192 PPOLG.sub.-- HPAVT GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS (STRAIN CY-145) 203-237 PPOLG.sub.-- HRV14 GENOME POLYPROTEIN HUMAN RHINOVIRUS 14 17-44 559-586 652-679 1877- 1904 PPOLG.sub.-- HRV1B GENOME POLYPROTEIN HUMAN RHINOVIRUS 1B 1132- 1855- 1159 1882 PPOLG.sub.-- HRV2 GENOME POLYPROTEIN HUMAN RHINOVIRUS 2 1125- 1552- 1152 1593 PPOLG.sub.-- HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS 89 883-910 1141- 1566- 1862- 1168 1607 1889 PPOLG.sub.-- HUEV7 GENOME POLYPROTEIN HUMAN ENTEROVIRUS 70 (STRAIN J670/71) 876-910 PPOLG.sub.-- IBDVO STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-277 (STRAIN OH) PPOLG.sub.-- JAEV1 GENOME PPOLYPROTEIN JAPANESE ENCEPHALITIS VIRUS (STRAIN SA-14) 214-248 983- 2796- 1010 2823 PPOLG.sub.-- JAEV5 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS (STRAIN SA(V) 214-248 983- 2796- 1010 2823 PPOLG.sub.-- JAEVJ GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS (STRAIN 214-248 983- 2796- JAOARS982) 1010 2823 PPOLG.sub.-- JAEVN GENOME POLYPROTEIN JAPANESE ENCEPHALAITS VIRUS (STRAIN 141-175 911-938 NAKAYAMA) PPOLG.sub.-- KUNJM GENOME POLYPROTEIN KUNJIN VIRUS (STRAIN MRM61C) 980-1007 PPOLG.sub.-- LANVT GENOME POLYPROTEIN LANGAT VIRUS (STRAIN TP21) 431-465 1634- 1661 PPOLG.sub.-- LANVY GENOME POLYPROTEIN LANGAT VIRUS (STRAIN YELANTSEV) 431-465 PPOLG.sub.-- LIV GENOME POLYPROTEIN LOUPING ILL VIRUS 431-465 PPOLG.sub.-- LIVSB GENOME POLYPROTEIN LOUPING ILL VIRUS (STRAIN SB 526) 151-185 PPOLG.sub.-- MCFA GENOME POLYPROTEIN MOSQUITO CELL FUSING AGENT 671-698 3056- 3303- 3083 3330 PPOLG.sub.-- MDMV GENOME POLYPROTEIN MAIZE DWARF MOSAIC VIRUS 10-37 PPOLG.sub.-- MVEV GENOME POLYPROTEIN MURRAY VALLEY ENCEPHALITIS VIRUS 212-256 PPOLG.sub.-- OMV GENOME POLYPROTEIN ORNITHOGALUM MOSAIC VIRUS 24-51 946-973 PPOLG.sub.-- PEMVC GENOME POLYPROTEIN PEPPER MOTTLE VIRUS (CALIFORNIA ISOLATE) 377-404 704-738 831-858 900-927 1167- 1485- 1787- 2433- 1201 1512 1814 2464 PPOLG.sub.-- POL1M GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY) 1060- 1901- 1100 1931 PPOLG.sub.-- POL1S GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN SABIN) 670-697 1063- 1903- 1101 1933 PPOLG.sub.-- POL2L GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN LANSING) 1061- 1901- 1099 1931 PPOLG.sub.-- POL2W GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN W-2) 1061- 1901- 1099 1931 PPOLG.sub.-- POL32 GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAIN 23127) 1060- 1900- 1098 1930 PPOLG.sub.-- POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAINS P3/LEON/37 1060- 1900- AND P3/LEON N12A[1]B) 1098 1930 PPOLG.sub.-- PPVD GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN D) 921-948 1498- 2771- 948 1525 2798 PPOLG.sub.-- PPVEA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN EL AMAR) 1146- 1187 PPOLG.sub.-- PPVNA GENOME POLYPROTEIN PLUM POX POTYVIRUS (SIOLATE NAT) 920-947 1497- 2770- 1524 2800 PPOLG.sub.-- PPVRA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN RANKOVIC) 920-947 1497- 2770- 1524 2797 PPOLG.sub.-- PRSVH GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS (STRAIN P/MUTANT HA) 500-527 PPOLG.sub.-- PRSVP GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS (STRAIN P/MUTANT HA 5-1) 391-418 PPOLG.sub.-- PRSVW GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS (STRAIN W) 489-516 PPOLG.sub.-- PSBMV GENOME POLYPROTEIN PEA SEED-BORNE MOSAIC VIRUS (STRAIN DPD1) 271-315 1132- 1510- 1177 1537 PPOLG.sub.-- PVYC GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN C) (PVY) 433-460 701-735 PPOLG.sub.-- PVYHU GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN HUNGARIAN) 218-245 433-460 701-735 1486- 1777- 1513 1811 PPOLG.sub.-- PVYN GENOME POLYPROTEIN POTATA VIRUS Y (STRAIN N) 433-460 701-735 1486- 1777- 1513 1811 PPOLG.sub.-- PVYO GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN G) 433-460 701-735 PPOLG.sub.-- PYFV1 GENOME POLYPROTEIN PARSNIP YELLOW BLECK VIRUS (ISOLATE P-121) 1124- 2707- 1151 2734 PPOLG.sub.-- SUMVS GENOME POLYPROTEIN SUGARCANE MOSAIC VIRUS (STRAIN SC) 10-37 PPOLG.sub.-- SVDVH GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS 1024- (STRAIN H/3 '76) 1060 PPOLG.sub.-- SVDVU GENOME POLYPROTEIN 1024-1060 PPOLG.sub.-- TBEVS GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 87-121 214-272 1632- 2265- 29090- (STRAIN SOFJIN) 1661 2292 2936 PPOLG.sub.-- TBEVW GENOME POLYPROTEIN BORNE ENCEPHALATIS VIRUS 1632- (WESTERN SUBTYPE) 1659 PPOLG.sub.-- TEV GENOME POLYPROTEIN TOBACCO ETCH VIRUS 845-872 1148- 1416- 1773- 1175 1443 1800 PPOLG.sub.-- TMEVB GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS VIRUS 79-117 200-227 (STRAIN BEAN 8386) PPOLG.sub.-- TMEVD GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS VIRUS 90-117 200-227 (STRAIN DA) PPOLG.sub.-- TMEVG GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS VIRUS 90-117 200-227 (STRAIN GDVII) - PPOLG.sub.-- TUMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS 232-262 773-800 PPOLG.sub.-- TVMV GENOME POLYPROTEIN TOBACCO VEIN MOTTLING VIRUS 406-433 670-704 2708- 2742 PPOLG.sub.-- WMV2 GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II 202-229 PPOLG.sub.-- WNV GENOME POLYPROTEIN WEST NILE VIRUS 210-254 3385- 3412 PPOLG.sub.-- YEFV1 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN 17D) 436-463 PPOLG.sub.-- YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN PASTEUR 17D-204) 436-463 PPOLG.sub.-- ZYMV GENOME POLYPROTEIN ZUCCHINI YELLOW MOSAIC VIRUS 69-96 PPOLG.sub.-- POL1M GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY) 1063- 1903- 1101 1933 PPOLN.sub.-- EEVT NON-STRUCTURAL VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1402- 1894- POLYPROTEIN (STRAIN TRINIDAD DONKEY) 1467 1921 PPOLN.sub.-- FCVC6 NON-STRUCTURAL FELINE CALICIVRUS (STRAIN CFI/68 FIV) 445-472 POLYPROTEIN PPOLN.sub.-- FCVF9 NON-STRUCTURAL FELINE CALICIVIRUS (STRAIN F9) 1034- POLYPROTEIN 1061 PPOLN.sub.-- HEVBU NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN BURMA) 219-246 349-376 POLYPROTEIN PPOLN.sub.-- HEVME NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN MEXICO) 219-246 349-376 POLYPROTEIN PPOLN.sub.-- HEVMY N-STRUCTURAL HEPATITIS E VIRUS (STRAIN MYANMAR) 219-246 349-376 POLYPROTEIN PPOLN.sub.-- HEVPA NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN PAKISTAN) 218-245 348-375 POLYPROTEIN PPOLN.sub.-- MIDDV NON-STRUCTURAL MIDDELBURG VIRUS 955-982 POLYPROTEIN PPOLN.sub.-- ONNVG NON-STRUCTURAL O'NYONG-NYONG VIRUS (STRAIN GULU) 2453- POLYPROTEIN 2480 PPOLN.sub.-- RHDV NON-STRUCTURAL RABBIT HEMORRHAGIC DISEASE VIRUS 313-347 1657- POLYPROTEIN 1684 PPOLN.sub.-- RRVN NON-STRUCTURAL ROSS RIVER VIRUS (STRAIN NB5092) 1057- 1477- 2418- POLYPROTEIN 1084 1504 2445 PPOLN.sub.-- RRVT NON-STRUCTURAL ROSS RIVER VIRUS (STRAIN T48) 146-173 1087- POLYPROTEIN 1114 PPOLN.sub.-- RUBVT NON-STRUCTURAL RUBELLA VIRUS (STRAIN THERIEN) 2060- POLYPROTEIN 2087 PPOLN.sub.-- SFV NON-STRUCTURAL SEMLIKI FOREST VIRUS 1154- POLYPROTEIN 1181 PPOLN.sub.-- SINDO NON-STRUCTURAL SINDBIS VIRUS (SUBTYPE OCKELBO/STRAIN 936-970 POLYPROTEIN EDSBYN 82-5) PPOLN.sub.-- WEEV NON-STRUCTURAL WESTERN EQUINE ENCEPHALITIS VIRUS 4-31 POLYPROTEIN PPOLS.sub.-- IBDV5 STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN 52/70) PPOLS.sub.-- IBDVA STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN AUSTRALIAN 002-73) PPOLS.sub.-- IBDVC STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN CU-1) PPOLS.sub.-- IBDVE STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN E) PPOLS.sub.-- IBDVP STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 212-239 (STRAIN PBG-98) PPOLS.sub.-- IBDVS STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN STC) PPOLS.sub.-- ONNVG STRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS (STRAIN GULU) 356-383 PPOLS.sub.-- RRVN STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) 939-973 PPOLS.sub.-- RRVT STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) 939-973 PPOLS.sub.-- SINDO STRUCTURAL POLYPROTEIN SINDBIS VIRUS (SUBTYPE OCKELBO/STRAIN 1138- EDSBYN 82-5) 1165 PPOLS.sub.-- SINDV STRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAINS HRSP AND HRLP) 1138- 1165 PPOLS.sub.-- WEEV STRUCTURAL POLYPROTEIN WESTERN EQUINE ENCEPHALITIS VIRUS 920-947 PPOL.sub.-- BAEVM POL POLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 675-706 715-742 PPOL.sub.-- CAEVC POL POLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 886-924 (STRAIN CORK) PPOL.sub.-- COYMV PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS 333-360 838-865 1075- 1178- 1313- 1102 1205 1347 PPOL.sub.-- EIAV9 POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS (CLONE 1369) 472-505 826-853 PPOL.sub.-- EIAVC POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS (CLONE CL22) 472-505 826-853 PPOL.sub.-- EIAVY POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 471-504 825-852 (ISOLATE WYOMING) PPOL.sub.-- FENV1 POL POLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1 532-599 627-654 PPOL.sub.-- FIVPE POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 442-473 (ISOLATE PETALUMA) PPOL.sub.-- FMVD ENZYMATIC POLYPROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 403-430 PPOL.sub.-- GALV POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 535-562 676-703 PPOL.sub.-- HTL1A POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 (STRAIN ATK) 674-712 PPOL.sub.-- HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 (CARIBBEAN ISOLATE) 674-712 PPOL.sub.-- HV1A2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245 620-661 (ARV2/SF2 ISOLATE) PPOL.sub.-- HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 637-673 (BH10 ISOLATE) PPOL.sub.-- HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 632-673 (BH5 ISOLATE) PPOL.sub.-- HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 632-673 (BRU ISOLATE) PPOL.sub.-- HV1EL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 624-660 (ELI ISOLATE) PPOL.sub.-- HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245 620-661 921-951 (HXB2 ISOLATE) PPOL.sub.-- HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 222-249 624-665 (JRCSF ISOLATE) PPOL.sub.-- HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 476-510 619-660 (MAL ISOLATE) PPOL.sub.-- HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 221-248 623-664 (MN ISOLATE) PPOL.sub.-- HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245 625-661 (NEW YORK-5 ISOLATE) PPOL.sub.-- HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 624-660 (NDK ISOLATE) PPOL.sub.-- HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245 620-661 (OYI ISOLATE) PPOL.sub.-- HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 637-673 (PV22 ISOLATE) PPOL.sub.-- HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 619-660 (RF/HAT ISOLATE) PPOL.sub.-- HV1U4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 613-540 619-660 (STRAIN UGANDAN/IOSLATE U PPOL.sub.-- HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 619-660 (Z2/CDC-Z34 ISOLATE) PPOL.sub.-- HV2BE POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 491-582 (ISOLATE BEN) PPOL.sub.-- HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 471-562 (ISOLATE CAM2) PPOL.sub.-- HV2D1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 509-600 (ISOLATE D194) PPOL.sub.-- HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 491-568 (ISOLATE D205,7) PPOL.sub.-- HV2G1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 471-562 (ISOLATE GHANA-1) PPOL.sub.-- HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 471-529 (ISOLATE NIH-Z) PPOL.sub.-- HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 472-563 (ISOLATE ROD) PPOL.sub.-- HV2SB POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 473-562 (ISOLATE SBLISY) PPOL.sub.-- HV2ST POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 491-582 (ISOLATE ST) PPOL.sub.-- IPHA PUTATIVE POL PROTEIN HAMSTER INTRACISTERNAL A-PARTICLE 200-227 354-381 461-499 PPOL.sub.-- IPMA PUTATIVE POL PROTEIN MOUSE INTRACISTERNAL A-PARTICLE 211-238 302-329 400-427 PPOL.sub.-- IPMAI PROBABLE POL POLYPROTEIN MOUSE INTRACISTERNAL A-PARTICLE 130-157 221-248 PPOL.sub.-- JSRV POL POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 204-231 PPOL.sub.-- MLVAK POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 453-480 PPOL.sub.-- MLVAV POL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 805-832 PPOL.sub.-- MLVRD POL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 716-743 805-832 PPOL.sub.-- MLVRK POL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 101-128 190-217 (STRAIN KAPLAN) PPOL.sub.-- MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 574-612 670-697 PPOL.sub.-- OMVVS POL POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV) 67-94 471-505 873-900 PPOL.sub.-- RSVP POL POLYPROTEIN ROUS SARCOMA VIRUS (STRAIN PRAGUE C) 797-824 PPOL.sub.-- RTBV POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 7-44 59-93 176-203 202-229 410-437 447-476 1022- 1049 PPOL.sub.-- RTBVP POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 7-44 59-93 176-203 202-229 410-437 447-476 1022- (ISOLATE PHILIPPINES) 1049 PPOL.sub.-- SFV1 POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 427-454 PPOL.sub.-- SIVA1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 431-458 547-574 637-671 (AGM155 ISOLATE) PPOL.sub.-- SIVA2 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 45-72 (AGM266 ISOLATE) PPOL.sub.-- SIVA3 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 71-98 (AGM385 ISOLATE) PPOL.sub.-- SIVAG POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 436-463 482-516 642-669 (AGM3 ISOLATE) PPOL.sub.-- SIVAI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 478-515 (ISOLATE AGM/CLONE GR1-1) PPOL.sub.-- SIVAT POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 657-691 (TYO-1 ISOLATE) PPOL.sub.-- SIVCZ POL POLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 242-269 626-685 (SIV(CPZ)) PPOL.sub.-- SIVGB POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 227-254 636-670 (ISOLATE GB1) PPOL.sub.-- SIVM1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 533-560 (MM142-83 ISOLATE) PPOL.sub.-- SIVMK POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 533-560 (K6W ISOLATE) PPOL.sub.-- SIVS4 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 496-523 (F236/SMH4 ISOLATE) PPOL.sub.-- SIVSP POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 499-526 (PBJ/BC13 ISOLATE) PPOL.sub.-- SMRVH POL POLYPROTEIN SQUIRREL MONKEY RETROVIRUS (SMRV-H) 601-628 PPOL.sub.-- SOCMV ENZYMATIC POLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 268-295 348-419 PPOL.sub.-- SRV1 POL POLYPROTEIN SIMIAN RETROVIRUS SRV-1 578-612 670-697 PPOL.sub.-- VILV POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514) 490-524 881-919 PPOL.sub.-- VILV1 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/CLONE LV1-1KS1 89-116 490-524 881-919 PPOL.sub.-- VILV2 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/CLONE LV1-1KS2) 490-524 881-919 PPR73.sub.-- MMTVB PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 288-315 PPR73.sub.-- MMTVC PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN C3H) 45-79 PPR73.sub.-- MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 167-201 PPYHD.sub.CPVBM POLYHEDRIN PRECURSOR BOMBYX MORI CYTOPLASMIC POLYHEDROS IS 37-71 VIRUS PPYHD.sub.-- NPVAC POLYHEDRIN AUTOGRAPHA CALIFORNICA NUCLEAR 13-47 POLYHEDROSIS VIRUS PPYHD.sub.-- NPVAS POLYHEDRIN AGROTIS SEGETUM NUCLEAR POLYHEDROSIS 14-48 201-228 VIRUS PPYHD.sub.-- NPVBM POLYHEDRIN BOMBYX MORI NUCLEAR POLYDEDROSIS VIRUS 12-46 PPYHD.sub.-- NPVBS POLYHEDRIN BUZURA SUPPRESSARIA NUCLEAR POLYHEDROSIS 14-48 VIRUS PPYHD.sub.-- NPVHC POLYHEDRIN HYPHANTRIA CUNEA NUCLEAR POLYHEDROSIS 13-40 VIRUS PPYHD.sub.-- NPVLD POLYHEDRIN LYMANTRIA DISPAR MULTICAPSID NUCLEAR 14-48 POLYHEDROSIS VIRUS PPYHD.sub.-- NPVMB POLYHEDRIN MAMESTRA BRASSICAE NUCLEAR POLYHEDROSIS 14-48 VIRUS PPYHD.sub.-- NPVOP POLYHEDRIN ORGYIA PSEUDOTSUGATA MULTICAPSID 13-47 POLYHEDROSIS VIRUS PPYHD.sub.-- NPVOS POLYHEDRIN ORGYIA PSEUDOTSUGATA SINGLE CAPSID 14-48 NUCLEAR POLYHEDROSIS VIRUS PPYHD.sub.-- NPVPF POLYHEDRIN PANOLIS FLAMMEA MULTIPLE NUCLEOCAPSID 14-48 POLYHEDROSIS VIRUS PPYHD.sub.-- NPVSE POLYHEDRIN SPODOPTERA EXIGUA NUCLEAR POLYHEDROSIS 14-48 VIRUS (STRAIN US) PPYHD.sub.-- NPVSF POLYHEDRIN SPODOPTERA FRUGIPERDA NUCLEAR 14-48 POLYHEDROSIS VIRUS PREV.sub.-- SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 41-68 (TYO-1 ISOLATE) PREV.sub.-- VILV REV PROTEIN VISNA LENTIVIRUS (STRAIN 1514) 22-62 PRIR1.sub.-- ASFM2 RIBONUC-DIPHOSPH REDUCT AFRICAN SWINE FEVER VIRUS (ISOLATE MALAWI 7-41 88-119 363-390 LARGE CHA LIL 20/1) PRIR1.sub.-- HCMVA RIBONUC-DIPHOSPH REDUCT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 622-649 LARGE CHA PRIR1.sub.-- HSVEB RIBONUC-DIPHOSPH REDUCT EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 75-102 LARGE CHA PRIR1.sub.-- HSVSA RIBONUC-DIPHOSPH REDUCT HERPESVIRUS SAIMIRI (STRAIN 11) 324-351 LARGE CHA PRIR1.sub.-- VACCC RIBONUC-DIPHOSPH REDUCT VACCINIA VIRUS (STRAIN COPENHAGEN) 367-401 LARGE CHA PRIR1.sub.-- VACCV RIBONUC-DIPHOSPH REDUCT VACCINIA VIRUS (STRAIN WR) 367-401 LARGE CHA PRIR1.sub.-- VARV RIBONUC-DIPHOSPH REDUCT VARIOLA VIRUS 367-401 LARGE CHA PRIR1.sub.-- VZVD RIBONUC-DIPHOSPH REDUCT VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 119-146 LARGE CHA PRIR1.sub.-- HSVB3 RIBONUC-DIPHOSPH REDUCT BOVINE HERPESVIRUS TYPE 1 (STRAIN 34) 90-117 SMALL CHA PRP94.sub.-- VACCV RNA-POL-ASSOC TRANS SPEC VACCINIA VIRUS (STRAIN WR) 41-68 513-540 FACTOR PRP94.sub.-- VARV RNA-POL-ASSOC TRANS SPEC VARIOLA VIRUS 41-75 77-104 513-540 FACTOR PRPO1.sub.-- VACCC DNA-DIRECTED RNA POL VACCINIA VIRUS (STRAIN COPENHAGEN) 237-264 587-616 810-837 961-992 147 KD PRPO1.sub.-- VACCV DNA-DIRECTED RNA POL VACCINIA VIRUS (STRAIN WR) 237-264 587-616 810-837 961-992 1011- 147 KD 1038 PRPO1.sub.-- VARV DNA-DIRECTED RNA POL VARIOLA VIRUS 237-264 587-616 810-837 961-992 147 KD PROPO2.sub.-- CAPVK DNA-DIRECTED RNA POL CAPRIPOXVIRUS (STRAIN KS-1) 19-65 114-155 132 KD PRPO2.sub.-- COWPX DNA-DIRECTED RNA POL COWPOX VIRUS 211-241 481-509 132 KD PRPO2.sub.-- VACCV DNA-DIRECTED RNA POL VACCINIA VIRUS (STRAIN WR) 211-241 481-509 132 KD PRPO2.sub.-- VARV DNA-DIRECTED RNA POL VARIOLA VIRUS 211-241 481-509 132 KD PRPO4.sub.-- CAPVK DNA-DIRECTED RNA POL 35 KD CAPRIPOXVIRUS (STRAIN KS-1) 36-63 PRPO7.sub.-- VACCV DNA-DIRECTED RNA POL 19 KD VACCINIA VIRUS (STRAIN WR) 8-35 43-70 PRPO7.sub.-- VARV DNA-DIRECTED RNA POL 19 KD VARIOLA VIRUS 43-70 PRPOA.sub.-- LELV RNA-DIRECTED RNA LELYSTAD VIRUS 1533- POLYMERASE 1560 PRPOL.sub.-- EAV RNA-DIRECTED RNA EQUINE ARTERITIS VIRUS 888-915 1639- POLYMERASE 1673 PRRP1.sub.-- IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN A/KOREA/426/68) 575-602 POL SUB P1 PRRP2.sub.-- IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN A/ANN ARBOR/6/60) 119-146 POL SUB P2 PRRP2.sub.-- IADH2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 119-146 POL SUB P2 A/DUCK/HOKKAIDO/8/80) PRRP2.sub.-- IAFPR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN A/FOWL 119-146 POL SUB P2 PLAGUE VIRUS/ROSTOCK/34) PRRP2.sub.-- IAGU2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 119-146 POL SUB P2 A/GULL/MARYLAND/704/77) PRRP2.sub.-- IAHLO RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/EQUINE/LONDON/1416/73) PRRP2.sub.-- IAHTE RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/EQUINE/TENNESSEE/5/86) PRRP2.sub.-- IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/KOREA/426/68) PRRP2.sub.-- IALE1 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/LENINGRAD/134/57) PRRP2.sub.-- IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/LENINGRAD/134/17/57) PRRP2.sub.-- IAMAN RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP2.sub.-- IANT6 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/NT/60/68) PRRP2.sub.-- IAP10 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/PINTAIL/ALBERTA/119/79) PRRP2.sub.-- IAPUE RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/PUERTO RICO/8/34) PRRP2.sub.-- IARUD RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/RUDDY TURNSTONE/NEW JERSEY/47/85) PRRP2.sub.-- IASIN RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SINGAPORE/1/57) PRRP2.sub.-- IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/TURKEY/MINNESOTA/833/80) PRRP2.sub.-- IAVI7 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 327-354 POL SUB P2 (STRAIN A/VICTORIA/3/75) PRRP2.sub.-- IAWIL RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/WILSON-SMITH/33) PRRP2.sub.-- IAZH2 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SWINE/HONG KONG/81/78) PRRP2.sub.-- IAZH3 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SWINE/HONG KONG/126/82) PRRP2.sub.-- IAZI1 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SWINE/IOWA/15/30) PRRP2.sub.-- IAZTF RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SWINE/TENNESSEE/26/77) PRRP2.sub.-- INBAC RNA-DIRECTED RNA INFLUENZA A VIRUS 157-194 POL SUB P2 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP2.sub.-- INBAD RNA-DIRECTED RNA INFLUENZA A VIRUS 164-194 POL SUB P2 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE) PRRP2.sub.-- INBS1 RNA-DIRECTED RNA INFLUENZA A VIRUS 157-194 POL SUB P2 (STRAIN B/SINGAPORE/222/79) PRRP3.sub.-- IABUD RNA-DIRECTED RNA INFLUENZA A VIRUS 537-567 POL SUB P3 (STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PRRP3.sub.-- IACH1 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN A/CHILE/1/83 331-358 POL SUB P3 PRRP3.sub.-- IAHPR RNA-DIRECTED RNA INFLUENZA A VIRUS 331-361 480-507 POL SUB P3 (STRAIN A/EQUINE/PRAGUE/1/56) PRRP3.sub.-- IAZTE RNA-DIRECTED RNA INFLUENZA A VIRUS 487-514 POL SUB P3 (STRAIN A/SWINE/TENNESSEE/24/77) PRRP3.sub.-- INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS 2-33 472-509 POL SUB P3 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP3.sub.-- INBAD RNA-DIRECTED RNA INFLUENZA B VIRUS 2-33 472-509 POL SUB P3 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE) PRRP3.sub.-- INCBE RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN C/BERLIN/1/85) 509-536 POL SUB P3 PRRP3.sub.-- INCJJ RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN C/JJ/50) 509-536 POL SUB P3 PRRP3.sub.-- THOGV RNA-DIRECTED RNA THOGOTO VIRUS 149-176 358-385 POL SUB P3 PRRPA.sub.-- CVH22 RNA-DIRECTED RNA HUMAN CORONA VIRUS (STRAIN 229E) 516-543 724-751 1971- 3781- POLYMERASE 2008 3811 PRRPA.sub.-- CVMJH RNA-DIRECTED RNA MURINE CORONAVIRUS MHV (STRAIN JHM) 624-651 4326- POLYMERASE 4353 PRRPB.sub.-- BEV RNA-DIRECTED RNA BERNE VIRUS 27-54 557-584 943-984 POLYMERASE PRRPB.sub.-- CVMA5 RNA-DIRECTED RNA MURINE CORONAVIRUS MHV (STRAIN A59) 885-915 1129- POLYMERASE 1170 PRRPB.sub.-- CVMJH RNA-DIRECTED RNA MURINE CORONAVIRUS MHV (STRAIN JHM) 885-915 1129- POLYMERASE 1170 PRRPB.sub.-- CVPFS RNA-DIRECTED RNA PORCINE TRANSMISSIBLE GASTROENTERITIS 20-47 353-380 385-412 POLYMERASE CORONAVIRUS (STRAIN FS722 PRRPB.sub.-- IBVB RNA-DIRECTED RNA AVIAN INFECTIOUS BRONCHITIS VIRUS 1510- 2296- 2547- POLYMERASE (STRAIN BEAUDETTE) 1547 2331 2574 PRRPB.sub.-- IBVK RNA-DIRECTED RNA AVIAN INFECTIOUS BRONCHITIS VIRUS 165-200 416-443 POLYMERASE (STRAIN KB8523) PRRPL.sub.-- BTV10 RNA-DIRECTED RNA BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 1032- POLYMERASE 1059 PRRPL.sub.-- BUNYW RNA POLYMERASE BUNYAMWERA VIRUS 80-114 317-350 1802- 1892- 1861 1919 PRRPL.sub.-- CDVO RNA POLYMERASE BETA CANINE DISTEMPER VIRUS (STRAIN 24-51 SUBUNIT ONDERSTEPOORT) PRRPL.sub.-- HANTV RNA POLYMERASE HANTANN VIRUS (STRAIN 76-118) 404-433 461-510 564-591 738-765 905-946 1993- 2020 PRRPL.sub.-- HRSVA RNA POLYMERASE BETA HUMAN RESPIRTAORY SYNCYTIAL VIRUS 103-192 210-237 667-694 788-815 1007- 1138- 1453- 1775- 2062- SUBUNIT (STRAIN A2) 1034 1165 1480 1803 2089 PRRPL.sub.-- RNA-DIRECTED RNA MARBURG VIRUS (STRAIN MUSOKE) 991-1018 1143- 1490- 1811- 2029- 2216- POLYMERASE 1170 1524 1838 2067 2266 PRRPL.sub.-- MABVP RNA-DIRECTED RNA MARBURG VIRUS (STRAIN POPP) 991-1018 1490- 2239- POLYMERASE 1524 2267 PRRPL.sub.-- MEASE RNA POLYMERASE BETA MEASLES VIRUS (STRAIN EDMONSTON) 95-122 196-223 2121- SUBUNIT 2148 PRRPL.sub.-- MUMPM RNA POLYMERASE BETA MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 111-142 780-807 1602- SUBUNIT 1632 PRRPL.sub.-- NDVB RNA POLYMERASE BETA NEWCASTLE DISEASE VIRUS (STRAIN 250-284 477-504 1979- SUBUNIT BEAUDETTE C/45) 2013 PRRPL.sub.-- PI2HT RNA POLYMERASE BETA HUMAN PARAINFLUENZA 2 VIRUS (STRAIN 322-349 1564- 1687- 1901- SUBUNIT TOSHIBA) 1598 1721 1946 PRRPL.sub.-- PI3H4 RNA POLYMERASE BETA HUMAN PARAINFLUENZA 3 VIRUS (STRAIN 52-86 136-163 608-638 1081- 1994-2115- SUBUNIT NIH 47885) 1123 2036 2142 PRRPL.sub.-- PUUMH RNA-DIRECTED RNA PUUMALA VIRUS (STRAIN HALLNAS V1) 388-415 557-591 731-758 864-891 926-953 1940- 1998- POLYMERASE 1971 2025 PRRPL.sub.-- RABVP RNA POLYMERASE BETA RABIES VIRUS (STRAIN PV) 204-231 605-632 2068- SUBUNIT 2123 PRRPL.sub.-- RABVS RNA POLYMERASE BETA RABIES VIRUS (STRAIN SAD B19) 204-231 605-632 2068- SUBUNIT 2123 PRRPL.sub.-- RDV RNA-DIRECTED RNA RICE DWARF VIRUS 855-882 POLYMERASE PRRPL.sub.-- RVFVZ RNA-DIRECTED RNA RIFT VALLEY FEVER VIRUS (STRAIN ZH-548 M12) 1536- 1653- POLYMERASE 1563 1687 PRRPL.sub.-- SEND5 RNA POLYMERASE BETA SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 629-656 1082- 1729- 2145- SUBUNIT 1116 1756 2180 PRRPL.sub.-- SENDE RNA POLYMERASE BETA SENDAI VIRUS (STRAIN ENDERS) 449-476 902-936 1549- 1965- SUBUNIT 1576 2000 PRRPL.sub.-- RNA POLYMERASE BETA SENDAI VIRUS (STRAIN 2) 629-656 1082- 1729- 2145- SUBUNIT 1116 1756 2180 PRRPL.sub.-- SEOU8 RNA-DIRECTED RNA SEOUL VIRUS (STRAIN 80-39) 461-488 564-591 731-758 905-932 POLYMERASE PRRPL.sub.-- SV5WR RNA POLYMERASE BETA SIMIAN VIRUS 5 (STRAIN 21004-WR) 1096- 1250- 1680- 2120- SUBUNIT 1123 1277 1710 2147 PRRPL.sub.-- SYNV RNA POLYMERASE BETA SONCHUS YELLOW NET VIRUS 825-859 1092- 1490- 1973- 2080- SUBUNIT 1119 1520 2000 2107 PRRPL.sub.-- TSWVB RNA-DIRECTEED RNA TOMATO SPOTTED WILT VIRUS (BRAZILIAN ISOLATE 477-504 542-573 1119- 1195- 1330- 1415- 1671- 1857- 2083- POLYMERASE CPNH1/BR-01) 1150 1229 1357 1442 1698 1884 2110 2166-2193 2324-2368 2771-2798 PRRPL.sub.-- UUK RNA POLYMERASE UUKUNIEMI VIRUS 142-187 1037- 1304- 1071 1331 PRRPL.sub.-- VSVJH RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS (SEROTYPE 1530- 1809- SUBUNIT NEW JERSEY/STRAIN HAZELHU 1557 1836 PRRPL.sub.-- VSVJO RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS (SEROTYPE 1205- 1809- SUBUNIT NEWE JERSEY/STRAIN OGDEN) 1232 1836 PRRPL.sub.-- VSVSJ RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS 1540- 1768- SUBUNIT (STRAIN SAN JUAN) 1567 1798 PRRPO.sub.-- ACLSV RNA-DIRECTED RNA APPLE HLOROTIC LEAF SPOT VIRUS 228-264 564-591 POLYMERASE PRRPO.sub.-- BWYVF PUTATIVE RNA-DIR RNA POL BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 356-383 PRRPO.sub.-- BYDV1 PUTATIVE RNA-DIR RNA POL BARLEY YELLOW DWARF VIRUS 772-799 (ISOLATE MAV-PS1) PRRPO.sub.-- BYDVP PUTATIVE RNA-DIR RNA POL BARLEY YELLOW DWARF VIRUS (ISOLATE PAV) 772-799 PRRPO.sub.-- BYDVR PUTATIVE RNA-DIR RNA POL BARLEY YELLOW DWARF VIRUS (ISOLATE P-PAV) 772-799 PRRPO.sub.-- CARMV PUTATIVE RNA-DIR RNA POL CARNATION MOTTLE VIRUS 93-127 277-304 667-694 PRRPO.sub.-- CGMVS PUTATIVE RNA-DIR RNA POL CUCUMBER GREEN MOTTLE MOSAIC VIRUS 387-414 1040- (WATERMELON STRAIN SH) 1067 PRRPO.sub.-- IBDV5 PUTATIVE RNA-DIR RNA POL AVIAN INFECTIOUS BURSAL DISEASE VIRUS 336-363 392-419 (STRAIN 52/70) PRRPO.sub.-- IBDVA PUTATIVE RNA-DIR RNA POL AVIAN INFECTIOUS BURSAL DISEASE VIRUS 661-688 717-744 (STRAIN AUSTRALIAN 002-73) PRRPO.sub.-- IPNVJ PUTATIVE RNA-DIR RNA POL INFECTIOUS PANCREATIC NECROSIS VIRUS 773-800 (SEROTYPE JASPER) PRRPO.sub.-- IPNVS PUTATIVE RNA-DIR RNA POL INFECTIOUS PANCREATIC NECROSIS VIRUS 773-800 (SEROTYPE SP) PRRPO.sub.-- LYCVA RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 834-886 1052- (STRAIN ARMSTRONG) 1079 PRRPO.sub.-- PPMVS PUTATIVE RNA-DIR RNA POL PEPPER MILD MOTTLE VIRUS (STRAIN SPAIN) 402-429 709-736 1072- 1099 PRRPO.sub.-- REOVD RNA-DIRECTED RNA REOVIRUS (TYPE 3/STRAIN DEARING) 61-88 POLYMERASE PRRPO.sub.-- REOVL RNA-DIRECTED RNA REOVIRUS (TYPE 1/STRAIN LANG) 61-88 POLYMERASE PRRPO.sub.-- ROTBR RNA-DIR RNA POL BOVINE ROTAVIRUS (STRAIN RF) 68-95 218-245 791-818 SUBUNIT VP1 PRRPO.sub.-- ROTBU RNA-DIR RNA POL BOVINE ROTAVIRUS (STRAIN UK) 65.95 218-245 791-841 975-1002 SUBUNIT VP1 PRRPO.sub.-- ROTPC RNA-DIR RNA POL PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 3-44 75-102 363-390 543-585 SUBUNIT VP1 PRRPO.sub.-- ROTPG RNA-DIR RNA POL PORCINE ROTAVIRUS (STRAIN GOTTFRIED 65-95 102-129 791-839 973-1002 SUBUNIT VP1 PRRPO.sub.-- ROTS1 RNA-DIR RNA POL SIMIAN 11 ROTAVIRUS (STRAIN SA11) 65-95 791-839 975-1002 SUBUNIT VP1 PRRPO.sub.-- SCVLA RNA-DIRECTED RNA SACCHAROMYCES CEREVISIAE VIRUS L-A 147-188 POLYMERASE PRRPO.sub.-- TACV RNA POLYMERASE TACARIBE VIRUS 163-204 241-271 1107- 1978- 1134 2008 PRRPO.sub.-- TMGMV PUTATAIVE RNA-DIR RNA POL TOBACCO MILD GREEN MOSAIC VIRUS 230-257 1316- 1397- (TMV STRAIN U2) 1343 1424 PRRPP.sub.-- BRSVA RNA POLYMERASE ALPHA BOVINE RESPIRATORY SYNCYTIAL VIRUS 99-133 SUBUNIT (STRAIN A51908) PRRPP.sub.-- CDVO RNA POLYMERASE ALPHA CANINE DISTEMPER VIRUS (STRAIN 315-370 SUBUNIT ONDERSTEPOORT) PRRPP.sub.-- HRSV RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNIT PRRPP.sub.-- HRSV1 RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNIT (SUBGROUP B/STRAIN 18537) PRRPP.sub.-- HRSVA RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNIT (STRAIN A2) PRRPP.sub.-- HRSVL RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNIT (SUBGROUP A/STRAIN LONG) PRRPP.sub.-- MEASE RNA POLYMERASE ALPHA MEASLES VIRUS (STRAIN EDMONSTON) 315-370 SUBUNIT PRRPP.sub.-- MEASI RNA POLYMERASE ALPHA MEASLES VIRUS (STRAIN IP-3-CA) 315-370 SUBUNIT PRRPP.sub.-- MEASY RNA POLYMERASE ALPHA MEASELS VIRUS (STRAIN YAMAGATA-1) 315-370 SUBUNIT PRRPP.sub.-- PI1HB RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C35) 84-111 234-261 375-416 SUBUNIT PRRPP.sub.-- PI1HC RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 84-111 234-261 375-416 SUBUNIT PRRPP.sub.-- PI1HD RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN 84-111 232-262 375-416 SUBUNIT CI-5/73) PRRPP.sub.-- PI1HE RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN 84-111 232-262 375-416 SUBUNIT CI-14/83) PRRPP.sub.-- PI2H RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 167-194 222-256 SUBUNIT PRRPP.sub.-- PI2HT RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 167-194 222-256 SUBUNIT (STRAIN TOSHIBA) PRRPP.sub.-- PI3B RNA POLYMERASE ALPHA BOVINE PARAINFLUENZA 3 VIRUS 34-91 255-282 285-314 SUBUNIT PRRPP.sub.-- PI3H4 RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 3 VIRUS 114-144 269-299 SUBUNIT (STRAIN NIH 47885) PRRPP.sub.-- PI4HA RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4A VIRUS 4-38 SUBUNIT (STRAIN TOSHIBA) PRRPP.sub.-- RABVP RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN PV) 93-127 SUBUNIT PRRPP.sub.-- SEND5 RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 330-357 379-420 SUBUNIT PRRPP.sub.-- SEND6 RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN 6/94) 330-357 379-420 SUBUNIT PRRPP.sub.-- SENDF RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN FUSHIMI) 330-357 379-420 SUBUNIT PRRPP.sub.-- SENDH RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN HARIS) 330-357 379-420 SUBUNIT PRRPP.sub.-- SENDZ RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN 2) 330-357 379-420 SUBUNIT PRRP.sub.-- SV5 RNA POLYMERASE ALPHA SIMIAN VIRUS 5 (STRAIN W3) 205-232 236-263 SUBUNIT PSODC.sub.-- VACCV SUPEROXIDE DISMUTASE VACCINIA VIRUS (STRAIN WR) 72-99 LIKE PROTEIN PSODC.sub.-- VARV SUPEROXIDE DISMUTASE VARIOLA VIRUS 72-99 LIKE PROTEIN PSPHR.sub.-- AMEPV SPHEROIDIN AMSACTA MOOREI ENTOMOPOXVIRUS 91-118 140-167 227-261 361-390 PSPI1.sub.-- MYXVL SERPIN 1 MYXOMA VIRUS (STRAIN LAUSANNE) 286-313 PSPI2.sub.-- VACCV SERIN PROTEINASE VACCINIA VIRUS (STRAIN WR) 59-86 INHIBITOR 2 PSPIA.sub.-- VACCC SERIN PROTEASE INH 2 VACCINIA VIRUS (STRAIN COPENHAGEN) 18-65 HOMOLOG PT2C2.sub.-- CHVP1 TYPE II RESTRICTION ENZYME PARAMECIUM BURSARIA CHLORELLA VIRUS 1 16-43 CVIAII PTAA2.sub.-- VACCV TRANS-ACTIVATOR VACCINIA VIRUS 95-133 PROTEIN A2 PTAG8.sub.-- FOWPV TRAN-ACTIVATOR FOWLPOX VIRUS 3-51 PROTEIN FP0 PTAG8.sub.-- VACCV TRANS-ACTIVATOR VACCINIA VIRUS 3-30 PROTEIN GK1 PTAG8.sub.-- VARV TRANS-ACTIVATOR VARIOLA VIRUS 3-30 PROTEIN GK-1 PTALA.sub.-- BFDV LARGE T ANTIGEN BUDGERIGAR FLEDGLING DISEASE VIRUS 291-318 PTALA.sub.-- POVBO LARGE T ANTIGEN BOVINE POLYOMAVIRUS 502-537 PTALA.sub.-- POVHA LARGE T ANTIGEN HAMSTER POLYOMAVIRUS 587-621 PTALA.sub.-- POVLY LARGE T ANTIGEN LYMPHOTROPIC POLYOMAVIRUS 224-258 616-684 PTALA.sub.-- POVM3 LARGE T ANTIGEN MOUSE POLYOMA VIRUS (STRAIN 3) 513-540 PTALA.sub.-- POVMA LARGE T ANTIGEN MOUSE POLYOMA VIRUS (STRAIN A2) 511-538 PTALA.sub.-- POVMC LARGE T ANTIGEN MOUSE POLYOMA VIRUS (STRAIN CRAWFORD 508-535 SMALL-PLAQUE) PTATR.sub.-- NPVAC TRANS-ACT TRANS REG AUTOGRAPHA CALIFORNICA NUCLEAR 407-434 489-523 532-559 PROTEIN POLYHEDROSIS VIRUS PTATR.sub.-- NPVBM TRANS-ACT TRANS REG BOMBYX MORI NUCLEAR POLYHEDROSIS VIRUS 412-439 494-528 537-564 PROTEIN PTATR.sub.-- NPVOP TRANS-ACT TRANS REG ORGYIA PSEUDOTSUGATA MULTICAPSID 512-554 PROTEIN POLYHEDROSIS VIRUS PTEGU.sub.-- EBV LARGE TEGUMENT PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 145-172 1215- 1344- 1876- 1242 1371 1903 PTEGU.sub.-- HCMVA PROBABLE LARGE TEGUMENT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 1251- 2202- PROTEIN 1281 2229 PTEGU.sub.-- HSV11 LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 667-694 1673- 1710 PTEGU.sub.-- HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 10-129 228-262 567-611 962-993 1098- 1661- 1884- 1181 1688 1911 PTEGU.sub.-- HSVEB LARGE TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 229-256 566-593 1205- 1232 PTEGU.sub.-- HSVSA PROBABLE LARGE TEGUMENT HERPESVIRUS SAIMIRI (STRAIN 11) 524-607 672-700 777-814 846-898 949-986 990-1017 1467- 2102- PROTEIN 1497 2135 PTEGU.sub.-- VZVD LARGE TEGUMENT PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 1121- 1579- 1158 1609 PTERM.sub.-- ADE07 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 7 375-413 PTMAF.sub.-- AVIS4 TRANSFORMING PROTEIN MAF AVIAN MUSCULOAPONEUROTIC FIBROSARCOMA 302-336 VIRUS AS42 PTOP1.sub.-- SFVKA DNA TOPOISOMERASE I SHOPE FIBROMA VIRUS (STRAIN KASZA) 38-65 132-176 PTOP1.sub.-- VACCV DNA TOPOISOMERASE I VACCINIA VIRUS 38-65 PTOP1.sub.-- VARV DNA TOPOISOMERASE I VARIOLA VIRUS 38.65 PTOP2.sub.-- ASFM2 DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS (ISOLATE MALAWI 902-936 LIL 20/1) PTYSY.sub.-- HSVAT THYMIDYLATE SYNTHASE HERPESVIRUS ATELES 116-143 PTYSY.sub.-- HSVSA THYMIDYLATE SYNTHASE HERPESVIRUS SAIMIRI (STRAIN 11) 120-147 PUL06.sub.-- EBV VIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 115-142 313-340 542-569 PUL06.sub.-- HSV11 VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 586-613 PUL06.sub.-- HSVEB VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 640-667 PUL06.sub.-- HSVSA VIRION GENE 43 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 15-42 302-358 368-402 PUL08.sub.-- HCMVA HYPOTHETICAL PROTEIN UL8 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 6-47 PUL11.sub.-- EBV HYPOTHETICAL PROTEIN BBLF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 15-42 PUL13.sub.-- HCMVA HYPOTHETICAL PROTEIN UL13 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 347-374 PUL14.sub.-- HSVEB HYPOTHETICAL GENE 48 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 247-286 PROTEIN PUL14.sub.-- VZVD HYPOTHETICAL GENE 46 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 64-101 PROTEIN PUL16.sub.-- HCMVA HYPOTHETICAL PROTEIN UL16 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 81-112 PUL20.sub.-- HCMVA HYPOTH PRO UL20 PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 34-61 PUL21.sub.-- HSVEB GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 44-71 PUL21.sub.-- VZVD GENE 38 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 380-407 PUL25.sub.-- HSVSA VIRION GENE 19 PROTEIN HERPESVIRUS SAIMIRI (STAIN 11) 34-61 204-231 362-389 PUL31.sub.-- HCMVA HYPOTHETICAL PROTEIN UL31 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 167-194 254-284 PUL32.sub.-- HSVEB MAJOR ENVELOPE GLYCOPROTEIN 300 EQUINE HERPESVIRUS TYPE 1 345-375 PUL34.sub.-- HSV11 VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 116-143 PUL34.sub.-- HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 208-235 PUL34.sub.-- VZVD VIRION GENE 34 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 112-139 PUL35.sub.-- HCMVA HYPOTHETICAL PROTEIN UL35 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 535-562 PUL37.sub.-- HSV11 PROTEIN UL37 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 470-497 853-884 PUL37.sub.-- HSVEB GENE 23 PROTEIN EQUIEN HERPESVIRUS TYPE 1 (STRAIN AB4P) 715-749 987-1014 PUL37.sub.-- HSVSA GENE 63 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 31-65 685-737 PUL37.sub.-- VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 107-134 485-512 719-746 976-1003 PUL41.sub.-- VZVD HOST SHUTOFF VIRION VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 330-364 PROTEIN PUL42.sub.-- HSV11 DNA-BINDING PROTEIN UL42 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 231-258 PUL43.sub.-- VZVD GENE 15 MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 129-156 312-349 PUL47.sub.-- HCMVA PROTEIN UL47 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 114-148 448-485 763-790 802-853 PUL47.sub.-- HSV11 VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 448-515 PUL47.sub.-- HSV1F VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F) 488-515 PUL47.sub.-- HSVE4 97 KD ALPHA TRANS- EQUINE HERPESVIRUS TYPE 4 190-217 INDUCING PROTEIN PUL50.sub.-- HCMVA PROTEIN UL50 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 159-186 PUL52.sub.-- EBV PROB DNA REPLICATION EPSTEIN-BARR VIRUS (STRAIN B95-8) 185-212 787-814 PUL52.sub.-- HSVEB DNA REPLICATION EQUINE HERPESVIRUS TYPE 1 (STRAIN AB41') 193-220 943-970 PROTEIN UL52 PUL52.sub.-- HSVSA PROB DNA REP GENE 56 HERPESVIRUS SAIMIRI (STRAIN 11) 130-157 PROTEIN PUL52.sub.-- VZVD PROB DNA REP GENE 6 VARICELLA-ZOSTER VIRUS 301-337 PROTEIN (STRAIN DUMAS) PUL59.sub.-- HCMVA HYPOTHETICAL PROTEIN UL59 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 74-101 PUL70.sub.-- HCMVA PROB DNA REP PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 65-92 UL70 PUL73.sub.-- HCMVA UL73 GLYCOPROTEIN PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 5-73 PUL73.sub.-- HSVSA HYPOTHETICAL GENE 53 HERPESVIRUS SAIMIRI (STRAIN 11) 9-36 PROTEIN PUL74.sub.-- HCMVA HYPOTHETICAL PROTEIN UL74 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 45-79 PROTEIN BSLF1 PUL87.sub.-- EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 409-436 B(C)RF1 PUL87.sub.-- HSV6U HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 536-563 729-768 UGANDA-1102) PUL87.sub.-- HSVSA HYPOTHETICAL GENE 24 HERPRESVIRUS SAIMIRI (STRAIN 11) 582-609 PROTEIN PUL92.sub.-- EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 107-144 168-196 BDLF4 PUL92.sub.-- HSVSA HYPOTHETICAL GENE 31 HERPESVIRUS SAIMIRI (STRAIN 11) 92-122 PROTEIN PUL93.sub.-- HCMVA PROTEIN UL93 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 26-53 314-381 PUL95.sub.-- HCMVA HYPOTHETICAL PROTEIN UL95 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 37-71 PUL95.sub.-- HSV6U HYPOTHETICAL PROTEIN 13R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 73-100 105-134 UGANDA-1102) PULA4.sub.-- HCMVA VIRION PROTEIN UL104 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 4-31 443-477 PULB9.sub.-- HCMVA HYPOTHETICAL PROTEIN UL119 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 33-78 PULD0.sub.-- HCMVA HYPOTHETICAL PROTEIN UL130 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 90-124 PUNG.sub.-- HSVSA URACIL-DNA GLYCOSYLASE HERPESVIRUS SAIMIRI (STRAIN 11) 135-176 PUNG.sub.-- SFVKA URACIL-DNA GLYCOSYLASE SHOPE FIBROMA VIRUS (STRAIN KASZA) 81-115 PUNG.sub.-- VACCC URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN COPENHAGEN) 85-116 129-156 PUNG.sub.-- VACCV URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN WR) 85-116 129-156 PUNG.sub.-- VARV URACIL-DNA GLYCOSYLASE VARIOLA VIRUS 85-116 PUS09.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 20-47 HXLF3 PUS14.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 277-308 HVLF4 PUS18.sub.-- HCMVA MEMBRANE PROTEIN HWLF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 191-218 PV121.sub.-- ASFL5 LIS 121-1 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN LIS57) 2-29 PV125.sub.-- AMVLE 125 KD PROTEIN ALFALFA MOSAIC VIRUS (STRAIN 425/ISOLATE 702-729 LEIDEN) PV137.sub.-- ASFL5 LIS 137 PROTEIN AFRICAN SWINEN FEVER VIRUS (STRAIN LIS57) 2-29 PV134K.sub.-- TRVPL 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PLB) 59-86 PV143.sub.-- NPVAC HELICASE AUTOGRAPHA CALIFORNICA NUCLEAR 496-560 945-972 POLYHEDROSIS VIRUS PV16K.sub.-- TRVPS 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PSG) 79-113 PV1A.sub.-- BBMV 1A PROTEIN BROAD BEAN MOTTLE VIRUS 23-54 710-737 840-868 PV1A.sub.-- BMV 1A PROTEIN BROME MOSAIC VIRUS 22-58 384-411 836-863 982-919 PV1A.sub.-- CCMV 1A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 249-276 PV1A.sub.-- CMVFN 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 11-38 PV1A.sub.-- CMVO 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN O) 11-38 864-902 PV1A.sub.-- CMVQ 1A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Q) 11-38 PV1A.sub.-- PSVJ 1A PROTEIN PEANUT STUNT VIRUS (STRAIN J) 4-38 372-399 PV1A.sub.-- TAV 1A PROTEIN TOMATO ASPERMY VIRUS 11-38 271-298 376-403 857-884 PV25K.sub.-- NPVAC 25 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR POLYHEDROSIS VIRUS 4-31 PV29K.sub.-- PEBV 29.6 KD PROTEIN PEA EARLY BROWNING VIRUS 140-170 PV29K.sub.-- TRVSY 29 KD PROTEIN TOBACCO RATTLE VIRUS 170-197 PV29K.sub.-- TRVTC 29 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 48-75 PV2A.sub.-- BBMV 2A PROTEIN BROAD BEAN MOTTLE VIRUS 301-328 PV2A.sub.-- CCMV 2A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 178-205 PV2A.sub.-- CMVFN 2A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 792-819 PV2A.sub.-- PSVJ 2A PROTEIN PEANUT STUNT VIRUS (STRAIN J) 325-352 717-751 PV2A.sub.-- TAV 2A PROTEIN TOMATO ASPERMY VIRUS 313-340 722-756 PV30K.sub.-- HCMVE 30 KD MAJOR EARLY PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN 194-221 EISENHARDT) PV30K.sub.-- TRVTC 29.1 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 130-160 PV33P.sub.-- ADE41 33 KD PHOSPHOPROTEIN HUMAN ADENOVIRUS TYPE 41 15-42 PV362.sub.-- ASFB7 K'362 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 75-102 PV363.sub.-- ASFB7 D'363 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 3-30 172-199 PV3A.sub.-- BMV 3A PROTEIN BROME MOSAIC VIRUS 11-38 PV3A.sub.-- CMVFN 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 222-252 PV3A.sub.-- CMVM 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN M) 2171.varies.252 PV3A.sub.-- CMVO 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN O) 222-253 PV3A.sub.-- CMVY 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Y) 222-253 PV3A.sub.-- IBVB 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 25-57 (STRAIN BEAUDETTE) PV3A.sub.-- IBVU5 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 29-56 (STRAIN UK/183/66) PV3A.sub.-- IBVB 3B PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 6-33 (STRAIN BEAUDETTE) PV50K.sub.-- BYDVP 50 KD PROTEIN BARLEY YELLOW DWARF VIRUS (ISOLATE PAV) 119-146 PV51K.sub.-- BWYVF 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 113-147 424-451 PV51K.sub.-- BWYVG 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE GB1) 113-147 424-451 PV56K.sub.-- PLRV1 56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 124-151 438-472 PV56K.sub.-- PLRVW 56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN WAGENINGEN) 124-151 438-472 PV58K.sub.-- BSMV 58 KD PROTEIN BARLEY STRIPE MOSAIC VIRUS 128-155 PV70K.sub.-- PLRV1 69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1) 110-140 PV70K.sub.-- PLRVW 69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN WAGENINGEN) 110-140 PV90K.sub.-- AMVLE 90 KD PROTEIN ALFALFA MOSAIC VIRUS (STRAIN 425/ISOLATE LEIDEN) 107-134 PVA06.sub.-- VACCC PROTEIN A6 VACCINIA VIRUS (STRAIN COPENHAGEN) 157-216 250-277 283-310 314-355 PVA06.sub.-- VACCV PROTEIN A6 VACCINIA VIRUS (STRAIN WR) 157-216 250-277 283-310 314-355 PVA06.sub.-- VARV PROTEIN A6 VARIOLA VIRUS 157-216 250-277 283-310 314-355 PVA08.sub.-- VACCC PROTEIN A8 VACCINIA VIRUS (STRAIN COPENHAGEN) 176-206 PVA08.sub.-- VARV PROTEIN A8 VARIOLA VIRUS 176-206 PVA09.sub.-- VARV PROTEIN A9 VARIOLA VIRUS 60-95 PVA11.sub.-- VACCC PROTEIN A11 VACCINIA VIRUS (STRAIN COPENHAGEN) 219-283 PVA11.sub.-- VARV PROTEIN A11 VARIOLA VIRUS 220-284 PVA18.sub.-- VARV 56 KD ABORTIVE LATE PROTEIN VARIOLA VIRUS 440-467 PVA20.sub.-- VACCC PROTEIN A20 VACCINIA VIRUS (STRAIN COPENHAGEN) 8-67 330-357 PVA20.sub.-- VARV PROTEIN A20 VARIOLA VIRUS 8-67 330-357 PVA22.sub.-- VACCC PROTEIN A22 VACCINIA VIRUS (STRAIN COPENHAGEN) 45-72 PVA22.sub.-- VARV PROTEIN A22 VARIOLA VIRUS 56-83 PVA23.sub.-- VACCC PROTEIN A23 VACCINIA VIRUS (STRAIN COPENHAGEN) 95-144 PVA23.sub.-- VARV PROTEIN A23 VARIOLA VIRUS 95-144 PVA28.sub.-- VACCC PROTEIN A28 VACCINIA VIRUS (STRAIN WR) 22-49 PVA28.sub.-- VARV PROTEIN A28 VARIOLA VIRUS 22-49 PVA30.sub.-- VACCC PROTEIN A30 VACCINIA VIRUS (STRAIN WR) 12-55 PVA31.sub.-- VACCC PROTEIN A31 VACCINIA VIRUS (STRAIN COPENHAGEN) 88-115 PVA31.sub.-- VARV PROTEIN A31 VARIOLA VIRUS 88-122 PVA34.sub.-- VACCC PROTEIN A34 VACCINIA VIRUS (STRAIN COPENHAGEN) 87-114 PVA34.sub.-- VACCV PROTEIN A34 VACCINIA VIRUS (STRAIN WR) 87-114 PVA34.sub.-- VARV PROTEIN A34 VARIOLA VIRUS 87-114 PVA36.sub.-- VACCV PROTEIN A36 PRECURSOR VACCINIA VIRUS (STRAIN WR) 120-155 PVA36.sub.-- VARV PROTEIN A36 PRECURSOR VARIOLA VIRUS 127-154 PVA38.sub.-- VACCC PROTEIN A38 VACCINIA VIRUS (STRAIN COPENHAGEN) 44-81 PVA38.sub.-- VACCV PROTEIN A38 VACCINIA VIRUS (STRAIN WR) 44-81 PVA38.sub.-- VARV PROTEIN A38 VARIOLA VIRUS 44-91 PVA39.sub.-- VACCC PROTEIN A39 VACCINIA VIRUS (STRAIN COPENHAGEN) 37-71 155-182 PVA39.sub.-- VACCV PROTEIN A39 VACCINIA VIRUS (STRAIN WR) 75-109 193-220 PVA43.sub.-- VACCC PROTEIN A43 VACCINIA VIRUS (STRAIN COPENHAGEN) 145-172 PVA43.sub.-- VACCV PROTEIN A43 VACCINIA VIRUS (STRAIN WR) 145-172 PVA43.sub.-- VARV PROTEIN A43 VARIOLA VIRUS 146-173 PVA47.sub.-- VACCC PROTEIN A47 VACCINIA VIRUS (STRAIN COPENHAGEN) 143-184 PVA47.sub.-- VACCV PROTEIN A47 VACCINIA VIRUS (STRAIN WR) 143-184 PVA47.sub.-- VARV PROTEIN A47 VARIOLA VIRUS 142-184 PVA49.sub.-- VACCC PROTEIN A49 VACCINIA VIRUS (STRAIN COPENHAGEN) 61-91 PVA49.sub.-- VACCV PROTEIN A49 VACCINIA VIRUS (STRAIN WR) 61-91 PVA49.sub.-- VARV PROTEIN A49 VARIOLA VIRUS 61-91 PVA55.sub.-- VACCC PROTEIN A55 VACCINIA VIRUS (STRAIN COPENHAGEN) 55-82 126-156 435-462 PVA55.sub.-- VACCV PROTEIN A55 VACCINIA VIRUS (STRAIN WR) 55-82 126-156 435-462 PVAL1.sub.-- BCTV AL1 PROTEIN BEET CURLY TOP VIRUS 22-49 PVAL3.sub.-- CLVK AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN WEST 79-106 KENYAN 844) PVAL3.sub.-- CLVN AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN NIGERIAN) 79-106 PVAL3.sub.-- SLCV AL3 PROTEIN SQUASH LEAF CURL VIRUS 101-128 PVAL3.sub.-- TYLCV AL3 PROTEIN TOMATO YELLOW LEAF CURL VIRUS 79-129 PVAT.sub.-- CAMVC APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841) 22-70 93-129 PVAT.sub.-- CAMVD APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 22-70 PVAT.sub.-- CAMVE APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC) 22-70 93-129 PVAT.sub.-- CAMVN APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 22-70 93-129 PVAT.sub.-- CAMVP APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN PV147) 22-70 93-129 PVAT.sub.-- CAMVS APHID TRANSMISSION PROTEIN 22-70 93-130 PVAT.sub.-- CAMVW APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN W260) 36-70 PVAT.sub.-- CERV APHID TRANSMISSION PROTEIN CARNATION ETCHED RING VIRUS 102-138 PVAT.sub.-- FMVD APHID TRANSMISSION PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 52-82 103-130 PVB03.sub.-- VACCV PROTEIN B3 VACCINIA VIRUS (STRAIN WR) 108-135 PVB04.sub.-- VACCC PROTEIN B4 VACCINIA VIRUS (STRAIN COPENHAGEN) 92-123 182-211 286-313 324-361 PVB04.sub.-- VACCV PROTEIN B4 VACCINIA VIRUS (STRAIN WR) 92-123 182-211 286-313 324-361 PVB04.sub.-- VARV PROTEIN B4 VARIOLA VIRUS 89-127 182-211 286-313 324-361 PVB05.sub.-- VACC0 PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN LC16MO) 254-284 PRO PREC PVB05.sub.-- VACCC PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN COPENHAGEN) 254-284 PRO PREC PVB05.sub.-- VACCL PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN LISTER) 254-284 PRO PREC PVB05.sub.-- VACCV PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN WR) 254-284 PRO PREC PVB07.sub.-- VACCV PROTEIN B7 PRECURSOR VACCINIA VIRUS (STRAIN WR) 28-62 PVB08.sub.-- VACCC PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN) 26-53 PVB08.sub.-- VACCV PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN WR) 26-53 PVB11.sub.-- VACCC PROTEIN B11 VACCINIA VIRUS (STRAIN COPENHAGEN) 21-54 PVB11.sub.-- VACCV PROTEIN B11 VACCINIA VIRUS (STRAIN WR) 5-38 PVB16.sub.-- COWPX IL-1 BIND PRO PRECURSOR COWPOX VIRUS 113-140 PVB17.sub.-- VACCC PROTEIN B17 VACCINIA VIRUS (STRAIN COPENHAGEN) 258-285 PVB17.sub.-- VACCV PROTEIN B17 VACCINIA VIRUS (STRAIN WR) 258-285 PVB18.sub.-- VACCC PROTEIN B18 VACCINIA VIRUS (STRAIN COPENHAGEN) 337-375 PVB18.sub.-- VACCV PROTEIN B18 VACCINIA VIRUS (STRAIN WR) 337-375 PVB18.sub.-- VARV PROTEIN B18 VARIOLA VIRUS 337-378 PVB19.sub.-- VACCC SURFACE ANTIGEN S VACCINIA VIRUS (STRAIN COPENHAGEN) 182-212 PRECURSOR PVB19.sub.-- VACCD SURFACE ANTIGEN S VACCINIA VIRUS (STRAIN DAIREN I) 180-210 PRECURSOR PVB19.sub.-- VACCV SURFACE ANTIGEN S VACCINIA VIRUS (STRAIN WR) 180-210 PRECURSOR PVB19.sub.-- VARV SURFACE ANTIGEN S VARIOLA VIRUS 180-210 PRECURSOR PVB20.sub.-- VACCC PROTEIN B20 VACCINIA VIRUS (STRAIN COPENHAGEN) 48-82 PVB21.sub.-- VACCV PROTEIN B21 VACCINIA VIRUS (STRAIN WR) 64-91 PVBL1.sub.-- BGMV BL1 PROTEIN BEAN GOLDEN MOSAIC VIRUS 120-147 248-275 PVBL1.sub.-- CLVK BL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN WEST 118-145 KENYAN 844) PVBL1.sub.-- CLVN BL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN NIGERIAN) 118-145 PVBL1.sub.-- PYMVV BL1 PROTEIN POTATO YELLOW MOSIAC VIRUS (ISOLATE 120-147 VENEZUELA) PVC02.sub.-- VACCC PROTEIN C2 VACCINIA VIRUS (STRAIN COPENHAGEN) 405-432 PVC02.sub.-- VACCV PROTEIN C2 VACCINIA VIRUS (STRAIN WR) 41-71 405-432 PVC04.sub.-- SFVKA PROTEIN C4 SHOPE FIBROMA VIRUS (STRAIN KASZA) 209-236 484-515 PVC04.sub.-- VACCC PROTEIN C4 VACCINIA VIRUS (STRAIN COPENHAGEN) 12-46 PVC04.sub.-- VACCV PROTEIN C4 VACCINIA VIRUS (STRAIN WR) 12-16 PVC04.sub.-- VARV PROTEIN C4 VARIOLA VIRUS 12-46 PVC05.sub.-- SFVKA HYPOTHETICAL PROTEIN C5 SHOPE FIBROMA VIRUS (STRAIN KASZA) 85-125 152-179 PVC05.sub.-- VACCC PROTEIN C5 VACCINIA VIRUS (STRAIN COPENHAGEN) 38-65 PVC05.sub.-- VACCV PROTEIN C5 VACCINIA VIRUS (STRAIN WR) 38-65 PVC05.sub.-- VARV PROTEIN C5 VARIOLA VIRUS 36-66 PVC07.sub.-- VACCV PROTEIN C7 VACCINIA VIRUS (STRAIN WR) 80-111 PVC07.sub.-- VARV PROTEIN C7 VARIOLA VIRUS 80-111 PVC09.sub.-- VACCC PROTEIN C9 VACCINIA VIRUS (STRAIN COPENHAGEN) 42-69 82-116 178-205 252-279 289-325 575-605 PVC09.sub.-- VACCV PROTEIN C9 VACCINIA VIRUS (STRAIN WR) 42-69 82-116 178-205 252-279 289-325 575-605 PVC10.sub.-- VACCC PROTEIN C10 VACCINIA VIRUS (STRAIN COPENHAGEN) 136-180 PVC10.sub.-- VACCV PROTEIN C10 VACCINIA VIRUS (STRAIN WR) 136-163 PVC10.sub.-- VARV PROTEIN C10 VARIOLA VIRUS 136-163 PVC13.sub.-- SFVKA PROTEIN C13 SHOPE FIBROMA VIRUS (STRAIN KASZA) 3-30 39-66 137-182 206-240 PVC17.sub.-- VACCC PROTEIN C17/B23 VACCINIA VIRUS (STRAIN COPENHAGEN) 111-152 PVC18.sub.-- VACCC PROTEIN C18/B24 VACCINIA VIRUS (STRAIN COPENHAGEN) 40-74 PVC19.sub.-- SFVKA PROTEIN C19 VACCINIA VIRUS (STRAIN KASZA) 56-97 PVC20.sub.-- VACCC PROTEIN C20/B26 VACCINIA VIRUS (STRAIN COPENHAGEN) 72-99 PVC22.sub.-- VARV PROTEIN C22/B28 HOMOLOG VARIOLA VIRUS 299-326 PVCAP.sub.-- EBV MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 847-874 PVCAP.sub.-- HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 136-170 355-382 UGANDA-1102) PVCAP.sub.-- HSVSA MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 769-799 PVCG3.sub.-- NPVAC DNA-BINDING PROTIEN AUTOGRAPHA CALIFORNICA NUCLEAR 133-165 199-248 POLYHEDROSIS VIRUS PVCOM.sub.-- ADE02 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE 2 88-115 PVCOM.sub.-- ADE05 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE 5 87-114 PVD05.sub.-- FOWP1 92.6 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 6-33 184-211 321-348 PVD05.sub.-- VACCC PROTEIN D5 VACCINIA VIRUS (STRAIN COPENHAGEN) 240-267 333-360 PVD05.sub.-- VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN WR) 240-267 PVD05.sub.-- VARV PROTEIN D5 VARIOLA VIRUS 240-267 PVD09.sub.-- VACCC PROTEIN D9 VACCINIA VIRUS (STRAIN COPENHAGEN) 123-150 PVD09.sub.-- VACCV PROTEIN D9 VACCINIA VIRUS (STRAIN WR) 123-150 PVD09.sub.-- VARV PROTEIN D9 VARIOLA VIRUS 123-160 PVD10.sub.-- SFVKA PROTEIN D10 SHOPE FIBROMA VIRUS (STRAIN KASZA) 18-52 PVDBP.sub.-- CERV DNA-BINDING PROTEIN CARNATION ETCHED RING VIRUS 2-35 PVE02.sub.-- VARV PROTEIN E2 VARIOLA VIRUS 282-322 PVE06.sub.-- VACCC PROTEIN E6 VACCINIA VIRUS (STRAIN COPENHAGEN) 89-116 437-464 PVE06.sub.-- VACCV PROTEIN E6 VACCINIA VIRUS (STRAIN WR) 89-116 437-464 PVE06.sub.-- VARV PROTEIN E6 VARIOLA VIRUS 89-116 367-394 437-464 PVE1.sub.-- HPV18 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 60-87 PVE1.sub.-- HPV2A E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 2A 21-48 PVE1.sub.-- HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 180-207 PVE1.sub.-- HPV39 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 103-130 PVE1.sub.-- HPV41 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 55-89 PVE1.sub.-- HPV42 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 42 25-59 PVE1.sub.-- HPV47 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 146-173 PVE1.sub.-- HPV57 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 21-48 PVE26.sub.-- NPVAC EARLY 25.9 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 72-113 POLYHEDROSIS VIRUS PVE2.sub.-- CRPVK PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE) PAPILLOMA VIRUS 5-34 (STRAIN KANSAS) PVE2.sub.-- HPV05 PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 17-51 PVE2.sub.-- HPV13 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 13 157-184 334-361 PVE2.sub.-- HPV16 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16 61-105 312-342 PVE2.sub.-- HPV18 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 313-340 PVE2.sub.-- HPV1A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 159-186 PVE2.sub.-- HPV2A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 2A 159-193 PVE2.sub.-- HPV33 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 304-331 PVE2.sub.-- HPV35 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 158-192 327-354 PVE2.sub.-- HPV39 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 7-34 323-357 PVE2.sub.-- HPV47 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 17-51 148-175 276-303 PVE2.sub.-- HPV51 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 137-184 PVE2.sub.-- HPV57 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 166-193 PVE2.sub.-- HPV58 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 2-36 309-336 PVE2.sub.-- HPV5B PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 17-51 PVE2.sub.-- PAPVE PROBABLE E2 PROTEIN EUROPEAN ELK PAPILLOMA VIRUS 120-150 PVE2.sub.-- PCPV1 E2 PROTEIN PYGMY CHIMPANZEE PAPILLOMA VIRUS TYPE 1 267-294 327-361 PVE4.sub.-- HPV05 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 202-229 PVE4.sub.-- HPV11 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 81-108 PVE4.sub.-- HPV16 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16 66-93 PVE4.sub.-- HPV18 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 59-86 PVE4.sub.-- HPV31 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 75-102 PVE4.sub.-- HPV41 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 63-97 PVE4.sub.-- HPV5B PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 202-229 PVE5A.sub.-- HPV11 PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 30-60 PVE5A.sub.-- HPV6B PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 30-60 PVE5A.sub.-- HPV6C PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6C 30-60 PVE5.sub.-- HPV35 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 35 27-54 PVE5.sub.-- HPV5B PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B 11-41 PVE5.sub.-- PCPV1 PROBABLE E5 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS TYPE 1 35-62 PVE6.sub.-- HPV18 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 75-102 PVE6.sub.-- HPV31 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 69-96 PVE6.sub.-- HPV39 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 71-102 PVE6.sub.-- HPV41 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 119-146 PVE6.sub.-- HPV45 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 45 75-102 PVE6.sub.-- HPV51 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 72-99 PVE6.sub.-- HPVME E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE ME180 71-102 PVE94.sub.-- NPVAC EARLY 94 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 620-647 POLYHEDROSIS VIRUS PVEF.sub.-- GVTN VIRAL ENHANCING FACTOR TRICHOPLUSIA NI GRANULOSIS VIRUS 411-438 PVENV.sub.-- DHV11 ENVELOPE GLYCOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/61) 318-366 PRECURSOR PVENV.sub.-- EAV PROBABLE ENVELOPE PROTEIN EQUINE ARTERITIS VIRUS 120-147 PVENV.sub.-- THOGV ENVELOPE GLYCOPROTEIN THOGOTO VIRUS 313-347 PRECURSOR PVF03.sub.-- VACCC PROTEIN F3 VACCINIA VIRUS (STRAIN COPENHAGEN) 71-110 185-212 PVF03.sub.-- VACCV PROTEIN F3 VACCINIA VIRUS (STRAIN WR) 71-110 185-212 PVF05.sub.-- VACCP 36 KD MAJOR MEMBRAND VACCINIA VIRUS (STRAIN L-IVP) 33-60 PRO PRECURSO PVF05.sub.-- VACCV 36 KD MAJOR MEMBRAND VACCINIA VIRUS (STRAIN WR) 33-60 PRO PRECURSO PVF06.sub.-- VARV PROTEIN F6 VARIOLA VIRUS 10-44 PVF11.sub.-- VACCC PROTEIN F11 VACCINIA VIRUS (STRAIN COPENHAGEN) 274-321 PVF11.sub.-- VACCP PROTEIN F11 VACCINIA VIRUS (STRAIN L-IVP) 270-317 PVF11.sub.-- VARV PROTEIN F11 VARIOLA VIRUS 274-321 PVF12.sub.-- VACCC PROTEIN F12 VACCINIA VIRUS (STRAIN COPENHAGEN) 10-37 113-140 554-581 PVF12.sub.-- VACCP PROTEIN F12 VACCINIA VIRUS (STRAIN L-IVP) 10-37 113-140 554-581 PVF12.sub.-- VARV PROTEIN F12 VARIOLA VIRUS 10-37 113-140 554-581 10-37 113-140 554-581 PVF16.sub.-- VACCC PROTEIN F16 VACCINIA VIRUS (STRAIN COPENHAGEN) 35-62 152-179 PVF16.sub.-- VACCP PROTEIN F16 VACCINIA VIRUS (STRAIN L-IVP) 35-62 152-179 PVF16.sub.-- VARV PROTEIN F16 VARIOLA VIRUS 35-62 149-179 PVFP4.sub.-- FOWPV PROTEIN FP4 FOWLPOX VIRUS 146-173 PVFUS.sub.-- ORNFNZ 10 KD FUSION PROTEIN ORF VIRUS (STRAIN NZ2) 59-86 PVFUS.sub.-- VACCC 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 37-64 PVFUS.sub.-- VACCV KD FUSION PROTEIN VACCINIA VIRUS (STRAIN WR) 37-64 PVG01.sub.-- VACCC PROTEIN G1 VACCINIA VIRUS (STRAIN COPENHAGEN) 225-252 301-335 PVG01.sub.-- VACCV PROTEIN G1 VACCINIA VIRUS (STRAIN WR) 164-191 240-274 PVG01.sub.-- VACCC PROTEIN G1 VARIOLA VIRUS 225-252 301-335 PVG02.sub.-- VACCV ISATIN-B-TSC DEP PROTEIN VACCINIA VIRUS (STRAIN WR) 96-123 PVG02.sub.-- VACCV ISATIN-B-TSC DEP PROTEIN VARIOLA VIRUS 96-123 PVG03.sub.-- HSVEB GENE 3 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 146-176 PVG03.sub.-- HSVEK GENE 3 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN 146-176 KENTUCKY A) PVG05.sub.-- VACCC PROTEIN G5 VACCINIA VIRUS (STRAIN COPENHAGEN) 48-75 131-161 225-289 355-389 PVG05.sub.-- VARV PROTEIN G5 VARIOLA VIRUS 48-75 131-161 225-289 355-389 PVG07.sub.-- HSV11 HYPOTH GENE 7 MEMB PRO ICTALURID HERPES VIRUS 1 71-98 PVG09.sub.-- VACCC PROTEIN F1 VACCINIA VIRUS (STRAIN COPENHAGEN) 308-338 PVG09.sub.-- VACCV PROTEIN F1 VACCINIA VIRUS (STRAIN WR) 271-301 PVG09.sub.-- VACCC PROTEIN F1 VARIOLA VIRUS 308-338 PVG12.sub.-- SPVIR GENE 12 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 11-45 PVG17.sub.-- HSV11 HYPOTHETICAL GENE 17 ICTALURID HERPESVIRUS 1 177-204 PROTEIN PVG18.sub.-- HSV11 HYPOTHETICAL GENE 18 ICTALURID HERPESVIRUS 1 174-208 PROTEIN PVG1.sub.-- SPVIR CAPSID PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 260-287 PVG1.sub.-- SPV4 CAPSID PROTEIN SPIROPLASMA VIRUS 4 287-314 383-410 PVG22.sub.-- HSV11 HYPOTHETICAL GENE 22 ICTALURID HERPESVIRUS 1 373-400 581-622 668-705 766-824 PROTEIN PVG24.sub.-- HSV11 HYPOTHETICAL GENE 24 ICTALURID HERPESVIRUS 1 31-58 PROTEIN PVG28.sub.-- HSV11 HYPOTHETICAL GENE 28 ICTALURID HERPESVIRUS 1 253-290 497-528 PROTEIN PVG2R.sub.-- AMEPV HYPOTHETICAL G2R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 33-64 91-118 PVG2.sub.-- SPV1R GENE 2 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 285-326 PVG2.sub.-- SPV4 GENE 2 PROTEIN SPIROPLASMA VIRUS 4 146-173 175-205 262-310 PVG34.sub.-- HSV11 HYPOTHETICAL GENE 34 ICTALURID HERPESVIRUS 1 95-122 PROTEIN PVG37.sub.-- HSV11 HYPOTHETICAL GENE 37 ICTALURID HERPESVIRUS 1 442-469 PROTEIN PVG39.sub.-- HSV11 HYPOTHETICAL GENE 39 ICTALURID HERPESVIRUS 1 651-678 1088- PROTEIN 1115 PVG3L.sub.-- AMEPV HYPOTHETICAL G3L PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 2-29 PVG3.sub.-- SPVIR GENE 3 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 15-49 PVG3.sub.-- SPV4 GENE 3 PROTEIN SPIROPLASMA VIRUS 4 18-52 87-148 PVG45.sub.-- HSVSA HYPOTHETICAL GENE 45 HERPESVIRUS SAIMIRI (STRAIN 11) 138-165 PROTEIN PVG46.sub.-- HSV11 PROBABLE MAJOR ICTALURID HERPESVIRUS 1 142-169 346-373 897-924 973-1007 GLYCOPROTEIN PVG48.sub.-- HSVSA HYPOTHETICAL GENE 48 HERPESVIRUS SAIMIRI (STRAIN 11) 360-394 PROTEIN PVG4R.sub.-- AMEPV G4R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 4-31 PVG4.sub.-- SPV1R GENE 4 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 116-146 PVG51.sub.-- HSV11 HYPOTH GENE 51 MEMBRANE ICTALURID HERPESVIRUS 1 34-61 87-114 PROTEIN PVG52.sub.-- HSVSA HYPOTHETICAL GENE 52 HERPESVIRUS SAIMIRI (STRAIN 11) 47-74 PROTEIN PVG56.sub.-- HSV11 HYPOTHETICAL GENE 56 ICTALURID HERPESVIRUS 1 582-609 PROTEIN PVG5.sub.-- SPV1R GENE 5 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 65-92 PVG5.sub.-- SPV4 GENE 5 PROTEIN SPIROPLASMA VIRUS 4 56-83 PVG63.sub.-- HSV11 HYPOTHETICAL GENE 63 ICTALURID HERPESVIRUS 1 550-584 PROTEIN PVG64.sub.-- HSV11 HYPOTHETICAL GENE 64 ICTALURID HERPESVIRUS 1 447-504 PROTEIN PVG65.sub.-- HSV11 HYPOTHETICAL GENE 65 ICTALURID HERPESVIRUS 1 1213- PROTEIN 1254 PVG66.sub.-- HSV11 HYPOTHETICAL GENE 66 ICTALURID HERPESVIRUS 1 362-406 PROTEIN PVG67.sub.-- HSV11 HYPOTHETICAL GENE 67 ICTALURID HERPESVIRUS 1 1342- PROTEIN 1369 PVG68.sub.-- HSV11 HYPOTHETICAL GENE 68 ICTALURID HERPESVIRUS 1 261-288 PROTEIN PVG72.sub.-- HSV11 HYPOTHETICAL GENE 72 ICTALURID HERPESVIRUS 1 447-481 PROTEIN PVG75.sub.-- HSV11 HYPOTHETICAL GENE 75 ICTALURID HERPESVIRUS 1 388-422 PROTEIN PVG76.sub.-- HSV11 HYPOTHETICAL GENE 76 ICTALURID HERPESVIRUS 1 200-227 PROTEIN PVG7.sub.-- SPV4 GENE 7 PROTEIN SPIROPLASMA VIRUS 4 14-44 PVGF1.sub.-- IBVB F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 1230- 2408- 1260 2435 PVGL2.sub.-- CVBF E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN F15) 399-426 642-676 1022- 1278- 1084 1305 PVGL2.sub.-- CVBL9 E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN L9) 399-426 1022- 1278- 1084 1305 PVGL2.sub.-- CVBLY E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138) 399-426 642-676 1022- 1278- 1084 1305 PVGL2.sub.-- CVBM E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS) 399-426 642-676 1022- 1278- 1084 1305 PVGL2.sub.-- CVBQ E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN QUEBEC) 399-426 642-676 1022- 1278- 1084 1305 PVGL2.sub.-- CVBV E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN VACCINE) 399-426 642-676 1022- 1278- 1084 1305 PVGL2.sub.-- CVH22 E2 GLYCOPROTEIN PRECURSOR HUMAN CORONAVIRUS (STRAIN 229E) 770-797 809-875 1056- 1112 PVGL2.sub.-- CVM4 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN 643-684 1030- WILD TYPE 4) 1092 PVGL2.sub.-- CVMA5 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN A59) 36-63 591-632 978-1040 PVGL2.sub.-- CVMJC E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN 643-684 1030- JHMV/VARIANT CL-2) 1092 PVGL2.sub.-- CVMJH E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN JHM) 502-543 889-951 PVGL2.sub.-- CVPFS E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 692-733 1072- 1353- CORONAVIRUS (STRAIN FS722 1145 1389 PVGL2.sub.-- CVPM1 E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 692-733 1069- 1353- CORONAVIRUS (STRAIN MILLE 1145 1389 PVGL2.sub.-- CVPPR E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 73-107 690-731 1067- 1351- CORONAVIRUS (STRAIN PUR46 1143 1387 PVGL2.sub.-- CVPPU E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-107 690-731 1067-1143 1351- CORONAVIRUS (STRAIN PURD 1143 1387 PVGL2.sub.-- CVPR8 E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS (STRAIN 468-509 845-921 1129- 86/137004/BRITISH ISOLAT 1165 PVGL2.sub.-- CVPRM E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 468-509 845-921 1129- (STRAIN RM4) 1165 PVGL2.sub.-- CVPRT E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-107 690-731 1067-1143 1351- CORONAVIRUS (STRAIN NEB72 1143 1387 PVGL2.sub.-- EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN B95-8) 68-102 GLYCOPROTEIN PVGL2.sub.-- FIPV E2 GLYCOPROTEIN PRECURSOR FELINE INFECTIOUS PERITONITIS VIRUS 189-233 454-481 709-736 1072- 1356- (STRAIN 79-1146) 1148 1392 PVGL2.sub.-- 1BV6 E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 809-836 876-903 1057- (STRAIN 6/82) 1091 PVGL2.sub.-- 1BVB E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 808-835 875-902 1056- (STRAIN BEAUDETTE) 1090 PVGL2.sub.-- IBVD2 E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 809-836 876-903 1057- (STRAIN D274) 1091 PVGL2.sub.-- IBVK E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 808-835 875-902 1056- (STRAIN KB8523) 1090 PVGL2.sub.-- IBVM E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 808-835 875-902 1056- (STRAIN M41) 1090 PVGLB.sub.-- EBV GLYCOPROTEIN GP110 EPSTEIN-BARR VIRUS (STRAIN B95-8) 95-122 631-658 PRECURSOR PVGLB.sub.-- HCMVA GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 25-88 397-424 440-467 851-878 PVGLB.sub.-- HCMVT GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 50-88 397-424 435-462 852-879 PVGLB.sub.-- HSVB1 GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 427-454 PVGLB.sub.-- HSVB2 GLYCOPROTEIN B-1 BOVINE HERPESVIRUS TYPE 2 (STRAIN BMV) 447-474 PRECURSOR PVGLB.sub.-- HSVE1 GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (ISOLATE HVS25A) 443-470 934-961 PVGLB.sub.-- HSVE4 GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 4 486-513 616-643 PVGLB.sub.-- HSVEA GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB1) 443-470 934-961 PVGLB.sub.-- HSVEB GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 443-470 934-961 PVGLB.sub.-- HSVEL GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAINN KENTUCKY D) 443-470 933-960 PVGLB.sub.-- HSVMD GLYCOPROTEIN B PRECURSOR MAREK'S DISEASE HERPESVIRUS (STRAIN RB-1B) 93-120 352-379 PVGLB.sub.-- MCMVS GLYCOPROTEIN B PRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 381-408 441-475 PVGLC.sub.-- HSV11 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 469-510 PVGLC.sub.-- HSV1K GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 469-510 PVGLC.sub.-- HSVEB GLYCOPROTEIN C PRECURSOR EQUINE HERPESVIRUS TYPE 1 124-151 PVGLC.sub.-- VZVD GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 295-322 PVGLC.sub.-- VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN SCOTT) 295-322 PVGLE.sub.-- HSV2 GLYCOPROTEIN E PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2) 111-148 PVGLF.sub.-- BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243 442-469 486-531 PRECURSOR (STRAIN A51908) PVGLF.sub.-- BRSVC FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243 444-471 486-533 PRECURSOR (STRAIN COPENHAGEN) PVGLF.sub.-- BRSVR FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243 444-469 488-533 PRECURSOR (STRAIN RB94) PVGLF.sub.-- CDVO FUSION GLYCOPROTEIN CANINE DISTEMPER VIRUS (STRAIN 252-293 340-367 PRECURSOR ONDERSTEPOORT) PVGLF.sub.-- HRSV1 FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-203 442-471 488-515 PRECURSOR (SUBGROUP B/STRAIN 18537) PVGLF.sub.-- HRSVA FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 213-243 488-518 PRECURSOR (STRAIN A2) PVGLF.sub.-- HRSVL FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243 444-471 488-515 PRECURSOR (SUBGROUP A/STRAIN LONG) PVGLF.sub.-- HRSVR FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 213-243 442-471 488-518 PRECURSOR (STRAIN RSS-2) PVGLF.sub.-- MEASE FUSION GLYCOPROTEIN MEASLES VIRUS (STRAINS EDMONSTON 228-262 PRECURSOR AND HALLE) PVGLF.sub.-- MEASI FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN IP-3-CA) 231-265 PRECURSOR PVGLF.sub.-- MEASY FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN YAMAGATA-1) 228-262 PRECURSOR PVGLF.sub.-- MUMP1 FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN SBL-1) 20-54 447-486 PRECURSOR PVGLF.sub.-- MUMPM FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 20-54 447-486 PRECURSOR PVGLF.sub.-- MUMPR FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN RW) 20-54 447-486 PRECURSOR PVGLF.sub.-- MUMPS FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN SBL) 151-178 426-511 PRECURSOR PVGLF.sub.-- NDVA FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSOR AUSTRALIA-VICTORIA/32) PVGLF.sub.-- NDVB FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSOR BEAUDETTE C/45) PVGLF.sub.-- NDVH3 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN HER/33) 151-178 426-512 PRECURSOR PVGLF.sub.-- NDVH4 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSOR B1-HITCHNER/47) PVGLF.sub.-- NDVI FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN ITALIEN/45) 151-178 426-512 PRECURSOR PVGLF.sub.-- NDVA FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN LAS/46) 151-178 192-219 426-512 PRECURSOR PVGLF.sub.-- NDVM FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 437-512 PRECURSOR MIYADERA/51) PVGLF.sub.-- NDVQ FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 433-512 PRECURSOR QUEENSLAND/66) PVGLF.sub.-- NDVT FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN TEXAS) 151-178 426-512 PRECURSOR PVGLF.sub.-- NDVTG FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSOR TEXAS G.B./48) PVGLF.sub.-- NDVU FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN ULSTER/67) 151-178 426-512 PRECURSOR PVGLF.sub.-- PHODV FUSION GLYCOPROTEIN PHOCINE DISTEMPER VIRUS 36-63 221-262 309-336 PRECURSOR PVGLF.sub.-- PI1HC FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 147-174 210-266 PRECURSOR PVGLF.sub.-- PI2H FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 90-117 141-175 238-266 483-528 PRECURSOR PVGLF.sub.-- PI2HG FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 90-117 141-175 238-266 483-528 PRECURSOR (STRAIN GREER) PVGLF.sub.-- PI2HT FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 90-117 141-175 238-266 483-528 PRECURSOR (STRAIN TOSHIBA) PVGLF.sub.-- PI3B FUSION GLYCOPROTEIN BOVINE PARAINFLUENZA 3 VIRUS 115-182 207-241 459-497 PRECURSOR PVGLF.sub.-- PI3H4 FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 3 VIRUS 115-182 207-241 459-497 PRECURSOR (STRAIN N1H 47885) PVGLF.sub.-- RINDK FUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN KABETE O) 224-265 458-485 PRECURSOR PVGLF.sub.-- RINDL FUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN L) 224-265 458-506 PRECURSOR PVGLF.sub.-- SEND5 FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 122-149 211-245 480-507 PRECURSOR PVGLF.sub.-- SENDF FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN FUSHIMI) 122-149 211-245 480-507 PRECURSOR PVGLF.sub.-- SENDH FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN HARRIS) 122-149 211-245 480-507 PRECURSOR PVGLF.sub.-- SENDJ FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN HVJ) 122-149 211-245 480-507 PRECURSOR PVGLF.sub.-- SENDZ FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z) 122-149 211-245 480-507 PRECURSOR PVGLF.sub.-- SV41 FUSION GLYCOPROTEIN SIMIAN VIRUS 41 144-185 241-269 459-496 PRECURSOR PVGLF.sub.-- SV5 FUSION GLYCOPROTEIN SIMIAN VIRUS 5 (STRAIN W3) 137-171 417-444 PRECURSOR PVGLF.sub.-- TRTV FUSION GLYCOPROTEIN TURKEY RHINOTRACHEITIS VIRUS 124-161 193-200 457-484 PRECURSOR PVGLG.sub.-- BEFV FUSION GLYCOPROTEIN BOVINE EPHEMERAL FEVER VIRUS 523-557 PRECURSOR PVGLG.sub.-- BRSVC MAJOR SURFACE BOVINE RESPIRATORY SYNCYTIAL VIRUS 92-123 GLYCOPROTEIN G (STRAIN COPENHAGEN) PVGLG.sub.-- HRSV1 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 63-93 GLYCOPROTEIN G (SUBGROUP B/STRAIN 18537) PVGLG.sub.-- HRSV4 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 66-107 GLYCOPROTEIN G (STRAIN RSB5857) PVGLG.sub.-- HRSV5 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 243-273 GLYCOPROTEIN G (STRAIN RSB6190) PVGLG.sub.-- HRSV8 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 66-93 GLYCOPROTEIN G (SUBGROUP B/STRAIN 8/60) PVGLG.sub.-- HSVE4 GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 4 271-298 PVGLG.sub.-- HSVEB GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 383-410 PVGLG.sub.-- RABVT SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN STREET) 489-519 PRECURSOR PVGLG.sub.-- VSVIG SPIKE GLYCOPROTEIN VESICULAR STOMATITIS VIRUS (SEROTYPE 472-499 PRECURSOR INDIANA/STRAIN GLASGOW) PVGLH.sub.-- EBV GLYCOPROTEIN GP85 EPSTEIN-BARR VIRUS (STRAIN B95-8) 549-576 619-648 PRECURSOR PVGLH.sub.-- HCMVA GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 107-136 270-297 PVGLH.sub.-- HCMVT GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 106-135 PVGLH.sub.-- HSV6G GLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 62-89 360-403 PVGLH.sub.-- HSVSA GLYCOPROTEIN H PRECURSOR HERPESVIRUS SAIMIRI (STRAINN 11) 388-415 PVGLI.sub.-- HCMVA IE GLYCOPROTEIN PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 47-111 PVGLM.sub.-- BUNGE M POLYPROTEIN PRECURSOR BUNYAVIRUS GERMISTON 512-546 914-941 1128- 1255 PVGLM.sub.-- BUNL7 M POLYPROTEIN PRECURSOR BUNYAVIRUS LA CROSSE (ISOLATE L74) 913-950 PVGLM.sub.-- BUNYW M POLYPROTEIN PRECURSOR BUNYAMWERA VIRUS 340-374 504-535 682-709 PVGLM.sub.-- DUGBV M POLYPROTEIN PRECURSOR DUGBE VIRUS 945-972 PVGLM.sub.-- HANTB M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN B-1) 73-100 693-720 PVGLM.sub.-- HANTH M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN HOJO) 75-102 PVGLM.sub.-- HANTL M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN LEE) 75-102 PVGLM.sub.-- HANTV M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN 76-118) 75-102 PVGLM.sub.-- INSV M POLYPROTEIN PRECURSOR IMPATIENS NECROTIC SPOT VIRUS 628-655 1069- 1101 PVGLM.sub.-- PHV M POLYPROTEIN PRECURSOR PROSPECT HILL VIRUS 69-96 PVGLM.sub.-- PUUMH M POLYPROTEIN PRECURSOR PUUMALA VIRUS (STRAIN HALLNAS B1) 72-110 PVGLM.sub.-- PUUMS M POLYPROTEIN PRECURSOR PUUMALA VIRUS (STRAIN SOTKAMO) 72-110 PVGLM.sub.-- SEOU8 M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN 80-39) 513-540 693-720 PVGLM.sub.-- SEOUR M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN R22) 73-100 513-540 694-721 PVGLM.sub.-- SEOUS M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN SR-11) 73-100 513-540 694-721 PVGLN.sub.-- BEFV NONSTRUCT GLYCOPRO GNS BOVINE EPHEMERAL FEVER VIRUS 523-564 PRECURSOR PVGLP.sub.-- BEV PEPLOMER GLYCOPROTEIN BERNE VIRUS 48-82 1145- 1184- 1505- PRECURSOR 1179 1211 1532 PVGLY.sub.-- JUNIN GLYCOPROTEIN POLYPROTEIN JUNIN ARENAVIRUS 14-41 PRECURSO PVGLY.sub.-- LASSG GLYCOPROTEIN POLYPROTEIN LASSA VIRUS (STRAIN GA391) 86-113 PRECURSO PVGLY.sub.-- MOPEI GLYCOPROTEIN POLYPROTEIN MOPEIA VIRUS 86-113 316-346 PRECURSO PVGLY.sub.-- PIARV GLYCOPROTEIN POLYPROTEIN PICHINDE ARENAVIRUS 334-375 PRECURSO PVGLY.sub.-- TACV GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS 109-136 315-350 PRECURSO PVGLY.sub.-- TACV5 GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS (STRAIN V5) 303-338 PRECURSO PVGLY.sub.-- TACV7 GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS (STRAIN V7) 302-337 PRECURSO PVGLY.sub.-- TACVT GLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS (STRAIN TRVL 11598) 303-338 PRECURSO PVGNM.sub.-- CPSMV BENOME POLYPROTEIN M COWPEA SEVERE MOSAIC VIRUS (STRAIN DG) 192-221 PVGP8.sub.-- EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN B95-8) 104-149 ANTIGEN GP85 PVGP.sub.-- EBOV STRUCTURAL GLYCOPROTEIN EBOLA VIRUS 280-314 PRECURSO PVGP.sub.-- MABVM STRUCTURAL GLYCOPROTEIN MARBURG VIRUS (STRAIN MUSOKE) 559-589 619-646 PRECURSO PVGP.sub.-- MABVP STRUCTURAL GLYCOPROTEIN MARBURG VIRUS (STRAIN POPP) 559-589 619-646 PRECORSO PVH05.sub.-- VACCC PROTEIN H5 VACCINIA VIRUS (STRAIN COPENHAGEN) 132-166 PVH05.sub.-- VACCV PROTEIN H5 VACCINIA VIRUS (STRAIN WR) 132-166 PVH05.sub.-- VARV PROTEIN H5 VARIOLA VIRUS 64-91 150-184 PVHEL.sub.-- LSV PROBABLE HELICASE LILY SYMPTOMLESS VIRUS 130-160 PVHRP.sub.-- VACCC HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 241-275 PVHRP.sub.-- VACCV HOST RANGE PROTEIN VACCINIA VIRUS (STRAIN WR) 241-275 PV101.sub.-- VACCC PROTEIN I1 VACCINIA VIRUS (STRAIN COPENHAGEN) 90-117 153-180 V101.sub.-- VARV PROTEIN I1 VARIOLA VIRUS 90-117 153-180 V103.sub.-- VACCC PROTEIN I3 VACCINIA VIRUS (STRAIN COPENHAGEN) 160-190 V103.sub.-- VACCV PROTEIN I3 VACCINIA VIRUS (STRAIN WR) 160-190 V103.sub.-- VARV PROTEIN I3 VARIOLA VIRUS 160-190 V108.sub.-- VACCC PUTATIVE RNA HELICASE 18 VACCINIA VIRUS (STRAIN COPENHAGEN) 290-317 548-575 593-632 V108.sub.-- VACCV PUTATIVE RNA HELICASE 18 VACCINIA VIRUS (STRAIN WR) 290-317 548-575 593-632 V108.sub.-- VARV PUTATIVE RNA HELICASE 18 VARIOLA VIRUS) 290-317 548-575 593-632 VIE1.sub.-- MCMVS IMMEDIATE-EARLY PROTEIN 1 MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 261-288 VIE2.sub.-- NPVOP IMMEDIATE-EARLY ORGYIA PSEUDOTSUGATA MULTICAPSID 355-385 PROTEIN IE-2 POLYHEDROSIS VIRUS VIEN.sub.-- NPVAC IE-REG PROTEIN IE-N AUTOGRAPHA CALIFORNICA NUCLEAR 217-325 343-400 POLYHEDROSIS VIRUS VIF.sub.-- H V1RH VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 62-89 (RF/HAT ISOLATE) VIF.sub.-- SIVAI VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 2-36 (ISOLATE AGM/CLONE GRI-1) VIMP.sub.-- HSVEB PROB INTEGRAL MEMBRANE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 147-174 PROTEIN VIMP.sub.-- HSVSA INTEGRAL MEMBRANE HERPESVIRUS SAIMIRI (STRAIN 11) 80-107 PROTEIN VINT.sub.-- SSV1 PROBABLE INTEGRASE SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 73-100 VJ01.sub.-- VACCC PROTEIN J1 VACCINIA VIRUS (STRAIN COPENHAGEN) 22-56 VJ01.sub.-- VACCV PROTEIN J1 VACCINIA VIRUS (STRAIN WR) 22-56 VJ01.sub.-- VARV PROTEIN J1 VARIOLA VIRUS 22-56 VL1.sub.-- CRPVK PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) PAPILLOMAVIRUS 331-383 (STRAIN KANSAS) VL1.sub.-- FPVL PROBABLE L1 PROTEIN AVIAN PAPILLOMAVIRUS FPV-L 38-65 VL1.sub.-- HPV08 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 354-392 VL1.sub.-- HPV18 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 183-210 VL1.sub.-- HPV33 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 19-46 VL1.sub.-- HPV41 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 345-372 VL1.sub.-- HPV51 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 19-46 VL1.sub.-- HPV58 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 45-72 VL2.sub.-- HPV1A PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 407-445 VL2.sub.-- HPV41 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 415-442 VL3.sub.-- REOVD MINOR CORE PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 330-357 LAMBDA 3 VL3.sub.-- REOVL MINOR CORE PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 330-357 LAMBDA 3 VL96.sub.-- IRV1 L96 PROTEIN TIPULA IRIDESCENT VIRUS 146-180 625-652 PVM1.sub.-- REOVL MINOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 290-317 PROTEIN MU PVM21.sub.-- REOVD MAJOR VIRION STRUC PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 625-662 MU-1/MU- PVM22.sub.-- REOVD MAJOR VIRION STRUC PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 624-661 MU-1/MU- PVM2.sub.-- REOVJ MAJOR VIRION STRUC PROTEIN REOVIRUS (TYPE 2/STRAIN D5/JONES) 624-661 MU-1/MU- PVM3.sub.-- REOVD MAJOR NONSTRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING) 159-186 343-370 456-483 631-690 PROTEIN MU-N PVMA2.sub.-- BRSVA MATRIX GLYCOPROTEIN M2 BOVINE RESPIRATORY SYNCYTIAL VIRUS 124-152 (STRAIN A51908) PVMA2.sub.-- HRSVA MATRIX GLYCOPROTEIN M2 HUMAN RESPIRATORY SYNCYTIAL VIRUS 124-151 (STRAIN A2) PVMAT.sub.-- BRSVA MATRIX PROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 219-246 (STRAIN A51908) PVMAT.sub.-- HRSVA MATRIX PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 219-246 (STRAIN A2) PVMAT.sub.-- INCJJ MATRIX (M) PROTEIN INFLUENZA C VIRUS (STRAIN C/JJ/50) 151-185 PVMAT.sub.-- NDVA MATRIX PROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 247-274 AUSTRALIA-VICTORIA/32) PVMAT.sub.-- PI2HT MATRIX PROTEIN HUMAN PARAINFLUENZA 2 VIRUS 96-123 (STRAIN TOSHIBA) PVMAT.sub.-- P13B MATRIX PROTEIN BOVINE PARAINFLUENZA 3 VIRUS 201-231 PVMAT.sub.-- PI3H4 MATRIX PROTEIN HUMAN PARAINFLUENZA 3 VIRUS 201-231 (STRAIN NIH 47885) PVMAT.sub.-- SV41 MATRIX PROTEIN SIMIAN VIRUS 41 323-353 PVME1.sub.-- CVBM E1 GLYCOPROTEIN BOVINE CORONAVIRUS (STRAIN MEBUS) 175-209 PVME1.sub.-- CVTKE E1 GLYCOPROTEIN TURKEY ENTERIC CORONAVIRUS 175-209 PVME1.sub.-- IBV6 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-48 184-218 (STRAIN 6/82) PVME1.sub.-- IBVB E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-48 184-218 (STRAIN BEAUDETTE) PVME1.sub.-- IBVB2 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-48 184-218 (STRAIN BEAUDETTE M42) PVME1.sub.-- IBVK E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 184-218 (STRAIN KB8523) PVMP.sub.-- CAMVC MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841) 220-254 273-273-324 PVMP.sub.-- CAMVD MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 29-56 220-254 273-324 PVMP.sub.-- CAMVE MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN BBC) 227-254 273-324 PVMP.sub.-- CAMVN MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 220-254 273-324 PVMP.sub.-- CAMVS MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 220-254 273-324 (STRAIN STRASBOURG) PVMP.sub.-- CAMVW MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN W260) 220-254 273-324 PVMP.sub.-- CERV MOVEMENT PROTEIN CARNATION ETCHED RING VIRUS 26-53 100-127 PVMP.sub.-- SOCMV MOVEMENT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 4-31 78-118 PVMSA.sub.-- HPBHE MAJOR SURFACE ANTIGEN HERON HEPATITIS B VIRUS 294-328 PRECURSOR PVMT1.sub.-- DHVI1 MATRIX PROTEIN 1 DHORI VIRUS (STRAIN INDIAN/1313/61) 38-65 237-264 PVMT8.sub.-- MYXVL M-T8 PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE) 163-190 PVMT9.sub.-- MYXVL MT-9 PROTEIN MYXOMA VIRUS (STRAIN LAUSANNE) 465-492 PVN34.sub.-- ROTPC NONSTRUCTURAL PROTEIN PROCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 83-113 NS34 PVNCN.sub.-- PAVBO PROBABLE NONCAPSID BOVINE PARVOVIRUS 149-176 PROTEIN NP1 PVNCS.sub.-- ADVG NONCAPSID PROTEIN NS-1 ALEUTIAN MINK DISEASE PARVOVIRUS (STRAIN G) 86-148 PVNCS.sub.-- AEDEV NONCAPSID PROTEIN NS-1 AEDES DENSONUCLEOSIS VIRUS 14-41 279-339 487-517 585-612 780-817 821-848 (STRAIN GK V 002 002) PVNCS.sub.-- MUMIM NONCAPSID PROTEIN NS-1 MURINE MINUTE VIRUS (STRAIN MVMI) 35-62 262-289 PVNCS.sub.-- MUMIV NONCAPSID PROTEIN NS-1 MURINE MINUTE VIRUS 35-62 262-289 PVNCS.sub.-- PAVHB NONCAPSID PROTEIN NS-1 HUMAN PARVOVIRUS B19 236-270 PVNCS.sub.-- PAVHH NONCAPSID PROTEIN NS-1 HAMSTER PARVOVIRUS H1 35-62 PVNCS.sub.-- PAVPN NONCAPSID PROTEIN NS-1 PORCINE PARVOVIRUS (STRAIN NADL-2) 24-55 169-196 316-346 PVNS1.sub.-- EHDV2 NONSTRUCTURAL PROTEIN NS1 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 411-438 (SEROTYPE 2/STRAIN ALBERTA) PVNS1.sub.-- IAALA NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ALASKA/6/77) 171-198 PVNS1.sub.-- IAANN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ANN ARBOR/6/60) 171-198 PVNS1.sub.-- IACHI NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/CHILE/1/83) 171-198 PVNS1.sub.-- IACKG NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/CHICKEN/GERMANY/N/49) PVNS1.sub.-- IACKJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 168-195 A/CHICKEN/JAPAN/24) PVNS1.sub.-- IADA2 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/DUCK/ALBERTA/60/76) PVNS1.sub.-- IAFOM NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/FORT MONMOUTH/1/47) PVNS1.sub.-- IAFOW NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/FORT/WARREN/1/50) PVNS1.sub.-- IALE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/LENINGRAD/134/57) PVNS1.sub.-- IAMA6 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/MALLARD/ALBERTA/88/76) PVNS1.sub.-- IAPI1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/PINTAIL/ALBERTA/121/79) PVNS1.sub.-- IAPI3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/PINTAIL/ALBERTA/358/79) PVNS1.sub.-- IATKB NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/TURKEY/BETHLEHEM-BLILIT/1492-B/82) PVNS1.sub.-- IATKC NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/TURKEY/CANADA/63) PVNS1.sub.-- IATRT NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/TERN/TURKMENIA/18/72) PVNS1.sub.-- IAUDO NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/UDORN/307/72) 171-198 PVNS1.sub.-- IAUSS NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 171-198 PVNS1.sub.-- INBPA NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN B/PA/79) 171-198 PVNS2.sub.-- IATKR NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS (STRAIN 87-114 A/TURKEY/OREGON/71) PVNS2.sub.-- INBLE NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS (STRAIN B/LEE/40) 51-78 PVNS2.sub.-- INBYA NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS (STRAIN B/YAMAGATA/1/73) 51-78 PVNS2.sub.-- INCJJ NONSTRUCTURAL PROTEIN NS2 INFLUENZA C VIRUS (STRAIN C/JJ/50) 71-98 PVNS3.sub.-- CVPFS NONSTRUCTURAL PROTEIN 3-1 PORCINE TRANSMISSIBLE GASTROENTERITIS 9-36 CORONAVIRUS (STRAIN FS772 PVNS4.sub.-- CVH22 NONSTRUCTURAL PROTEIN 4 HUMAN CORONAVIRUS (STRAIN 229E) 9-36 PVNS4.sub.-- RSV NONSTRUCTURAL PROTEIN NS4 RICE STRIPE VIRUS 6-40 PVNS7.sub.-- CVCAE NONSTRUCTURAL PROTEIN 7 CANINE ENTERIC CORONAVIRUS (STRAIN K378) 11-45 PVNS7.sub.-- CVFE3 NONSTRUCTURAL PROTEIN 7 FELINE ENTERIC CORONA VIRUS 8-42 (STRAIN 79-1683) PVNS7.sub.-- CVPFS NONSTRUCTURAL PROTEIN 7 PORCINE TRANSMISSIBLE GASTROENTERITIS 34-61 CORONAVIRUS (STRAIN FS772 PVNS7.sub.-- CVPPU NONSTRUCTURAL PROTEIN 7 PORCINE TRANSMISSIBLE GASTROENTERITIS 34-61 CORONAVIRUS (STRAIN PURD PVNS7.sub.-- CVPRM NONSTRUCTURAL PROTEIN 7 PORCINE RESPIRATORY CORONAVIRUS 34-61 PVNS7.sub.-- FIPV NONSTRUCTURAL PROTEIN 7 FELINE INFECTIOUS PERITONITS VIRUS 8-42 (STRAIN 79-1146) PVNSC.sub.-- PI1HE NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 41-75 (STRAIN CI-14/83) PVNSC.sub.-- PI3H4 NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 3 VIRUS 58-99 (STRAIN NIH 47885) PVNSM.sub.-- INSV NONSTRUCTURAL PROTEIN IMPATIENS NECROTIC SPOT VIRUS 262-296 NS-M PVNST.sub.-- BUNLC NONSTRUCTURAL PROTEIN BUNYAVIRUS LA CROSSE 57-84 NS-S PVNST.sub.-- TOSV NONSTRUCTURAL PROTEIN TOSCANA VIRUS 146-180 NS-S PVNUC.sub.-- EBOV NUCLEOPROTEIN EBOLA VIRUS 311-369 PVNUC.sub.-- IAANA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/ANAS ACUTA/PRIMORJE/695/76) PVNUC.sub.-- IAANN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/ANN ARBOR/6/60) PVNUC.sub.-- IABRA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/BRAZIL/11/78) 378-405 PVNUC.sub.-- IABUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/BUDGERIGAR/HOKKAIDO/1/77) PVNUC.sub.-- IACAL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/CALIFORNIA/10/78) PVNUC.sub.-- IACKG NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/CHICKEN/GERMANY/N/49) PVNUC.sub.-- IACKP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/CHICKEN/PENNSYLVANIA/1/83) PVNUC.sub.-- IADAU NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/AUSTRALIA/749/80) PVNUC.sub.-- IADBE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/BEIJING/1/78) PVNUC.sub.-- IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/CZECHOSLOVAKIA/56) PVNUC.sub.-- IADE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/ENGLAND/1/) PVNUC.sub.-- IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/ENGLAND/1/62) PVNUC.sub.-- IADHK NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/HONG KONG/7/75) PVNUC.sub.-- IADM2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/MEMPHIS/928/74) PVNUC.sub.-- IADMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/MANITOBA/1/53) PVNUC.sub.-- IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/NEW ZEALAND/31/76) PVNUC.sub.-- IADU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/UKRAINE/2/60) PVNUC.sub.-- IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/ENGLAND/19/55) PVNUC.sub.-- IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FORT MONMOUTH/1/47) PVNUC.sub.-- IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FORT WARREN/1/50) PVNUC.sub.-- IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FOWL PLAGUE VIRUS/DOBSON/`DUTCH`/27) PVNUC.sub.-- IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FOWL PLAGUE VIRUS/ROSTOCK/34) PVNUC.sub.-- IAGRE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GREY TEAL/AUSTRALIA/2/79) PVNUC.sub.-- IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/5/77) PVNUC.sub.-- IAGU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/704/77) PVNUC.sub.-- IAGU3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/1824/78) PVNUC.sub.-- IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/1815/79) PVNUC.sub.-- IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/ASTRAKHAN/227/84) PVNUC.sub.-- IAGUM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MASSACHUSETTS/26/80) PVNUC.sub.-- IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MINNESOTA/945/80) PVNUC.sub.-- IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/HICKOX/40) 378-405 PVNUC.sub.-- IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/JILLIN/1/89) PVNUC.sub.-- IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/LONDON/1416/73) PVNUC.sub.-- IAHMI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/MIAMI/1/63) PVNUC.sub.-- IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/68) 378-405 PVNUC.sub.-- IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/HONG KONG/5/83) 378-405 PVNUC.sub.-- IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/PRAGUE/1/56) PVNUC.sub.-- IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/TENNESSEE/5/86) PVNUC.sub.-- IAKIE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/KIEV/59/79) 378-405 PVNUC.sub.-- IALEN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/LENINGRAD/54/1) 378-405 PVNUC.sub.-- IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/MALLARD/ASTRAKHAN/244/82) PVNUC.sub.-- IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/MALLARD/NEW YORK/6750/78) PVNUC.sub.-- IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/MINK/SWEDEN/84) PVNUC.sub.-- IANEJ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/NEW JERSEY/8/76) PVNUC.sub.-- IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/NT/60/68) 378-405 PVNUC.sub.-- IAOHI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/OHIO/4/83) 378-405 PVNUC.sub.-- IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/PARROT/ULSTER/73) PVNUC.sub.-- IAUPE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/PUERTO RICO/8/34) PVNUC.sub.-- IARUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/RUDDY TURNSTONE/NEW JERSEY/47/85) PVNUC.sub.-- IASE0 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SEAL/MASSACHUSETTS/1/80) PVNUC.sub.-- IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SHEARWATER/AUSTRALIA/72) PVNUC.sub.-- IAS1N NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SINGAPORE/1/57) PVNUC.sub.-- IATE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TEAL/ICELAND/29/80) PVNUC.sub.-- IATKN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TURKEY/MINNESOTA/1661/81) PVNUC.sub.-- IATKO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TURKEY/ONTARIO/7732/66) PVNUC.sub.-- IATRS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TERN/SOUTH AFRICA/61) PVNUC.sub.-- IATRT NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TERN/TURKMENIA/18/72) PVNUC.sub.-- IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/TEXAS/1/77) 378-405 PVNUC.sub.-- IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/UDORN/307/72) 378-405 PVNUC.sub.-- IAUSS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 378-405 PVNUC.sub.-- IAVI6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/VICTORIA/5/68) 378-405 PVNUC.sub.-- IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/WHALE/MAINE/328/84) PVNUC.sub.-- IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/WHALE/PACIFIC OCEAN/19/76) PVNUC.sub.-- IAWIL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/WILSON-SMITH/33) PVNUC.sub.-- IAWIS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/WISCONSIN/3523/88) PVNUC.sub.-- IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/29/37) 378-405 PVNUC.sub.-- IAZ41 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/41/49) 378-405 PVNUC.sub.-- IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/CAMBRIDGE/1/35) PVNUC.sub.-- IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/DANDONG/9/83) PVNUC.sub.-- IAZGE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/GERMANY/2/81) PVNUC.sub.-- IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/HONG KONG/6/76) PVNUC.sub.-- IAZH3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/HONG KONG/126/82) PVNUC.sub.-- IAZH4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/HONG KONG/127/82) PVNUC.sub.-- IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/IOWA/15/30) PVNUC.sub.-- IAZI2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/IOWA/1976/31) PVNUC.sub.-- IAZI3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/IOWA/46) 378-405 PVNUC.sub.-- IAZJ1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/437/76) PVNUC.sub.-- JAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/2/79) PVNUC.sub.-- IAZJ3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/141/81) PVNUC.sub.-- JAZJ4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/839/89) PVNUC.sub.-- IAZJA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/JAMESBURG/42) PVNUC.sub.-- IAZMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/MAY/54) 378-405 PVNUC.sub.-- IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/NETHERLANDS/12/85) PVNUC.sub.-- IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/OHIO/23/35) PVNUC.sub.-- IAZON NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ONTARIO/2/81) PVNUC.sub.-- IAZTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/TENNESSEE/24/77) PVNUC.sub.-- IAZW1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/WISCONSIN/1/57) PVNUC.sub.-- IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/WISCONSIN/1/61) PVNUC.sub.-- INCCA NUCLEOPROTEIN INFLUENZA C VIRUS (STRAIN 99-126 416-443 451-478 C/CALIFORNIA/78) PVNUC.sub.-- MABVM NUCLEOPROTEIN MARBURG VIRUS (STRAIN MUSOKE) 366-407 PVNUC.sub.-- MABVP NUCLEOPROTEIN MARBURG VIRUS (STRAIN POPP) 366-407 PVO01.sub.-- VACCC PROTEIN O1 VACCINIA VIRUS (STRAIN COPENHAGEN) 7-37 109-138 581-608 PVO01.sub.-- VARV PROTEIN O1 VARIOLA VIRUS 7-37 109-138 581-608 PVOR1.sub.-- FXMV 152 KD PROTEIN FOXTAIL MOSAIC VIRUS 1023- 1050 PVOR1.sub.-- NMV 186 KD PROTEIN NARCISSUS MOSAIC VIRUS 996-1023 1527- 1561 PVOR1.sub.-- PMV 176 KD PROTEIN PAPAYA MOSAIC POTEXVIRUS 948-978 1481- 1532 PVOR1.sub.-- PVMR 223 KD PROTEIN POTATO VIRUS M (STRAIN RUSSIAN) 597-627 PVOR1.sub.-- PVX 165 KD PROTEIN POTATO VIRUS X 698-725 1017- 1044 PVOR1.sub.-- PVXX3 165 KD PROTEIN POTATO VIRUS X (STRAIN X3) 698-725 1017- 1044 PVOR1.sub.-- SMYEA 150 KD PROTEIN STRAWBERRY MILD YELLOW EDGE-ASSOCIATED 312-342 691-721 VIRUS PVP10.sub.-- NPVAC P10 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 7-41 POLYHEDROSIS VIRUS PVP10.sub.-- NPVOP P10 PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 7-48 POLYHEDROSIS VIRUS PVP10.sub.-- NPVSE P10 PROTEIN SPODOPTERA EXIGUA NUCLEAR POLYHEDROSIS 6-33 37-64 VIRUS (STRAIN US) PVP10.sub.-- RGDV NONSTRUCTURAL PROTEIN RICE GALL DWARF VIRUS 205-242 PNS10 PVP10.sub.-- WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 151-181 227-254 PNS10 PVP11.sub.-- RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 53-80 PNS11 PVP12.sub.-- WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 81-108 PNS12 PVP18.sub.-- WTVNJ NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS (STRAIN NJ) 81-108 PNS12 PVP19.sub.-- AMCV CORE PROTEIN P19 ARTICHOKE MOTTLED CRINKLE VIRUS 73-100 PVP19.sub.-- TBSVC CORE PROTEIN P19 TOMATO BUSHY STUNT VIRUS (STRAIN CHERRY) 73-100 PVP23.sub.-- HSVSA PROBABLE CAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 2-29 VP23 PVP26.sub.-- HSVEB CAPSID PROTEIN VP26 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 36-63 PVP26.sub.-- HSVSA CAPSID PROTEIN VP26 HERPESVIRUS SAIMIRI (STRAIN 11) 48-75 PVP2.sub.-- AHSV4 OUTER CAPSID PRPOTEIN VP2 AFRICAN HORSE SICKNESS VIRUS 277-304 410-437 632-662 907-934 (SEROTYPE 4/STRAIN VACCINE) PVP2.sub.-- BTV13 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA) 815-846 PVP2.sub.-- BTV1A OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 898-925 1/ISOLATE AUSTRALIA) PVP2.sub.-- BTV1S OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 119-146 1/ISOLATE SOUTH AFRICA) PVP2.sub.-- EHDV1 OUTER CAPSID PROTEIN VP2 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 72-103 415-453 (SEROTYPE1) PVP2.sub.-- ROTBR RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN RF) 39-94 523-553 PVP2.sub.-- ROTBU RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN UK) 39-94 524-554 PVP2.sub.-- ROTHW RNA-BINDING PROTEIN VP2 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 70-101 533-567 PVP2.sub.-- ROTPC RNA-BINDING PROTEIN VP2 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 52-99 128-156 518-545 705-746 PVP2.sub.-- ROTS1 RNA-BINDING PROTEIN VP2 SIMIAN 11 ROTOVIRUS (STRAIN SA11) 36-96 PVP30.sub.-- ASFE7 PHOSPHOPROTEIN P30 AFRICAN SWINE FEVER VIRUS (STRAIN E-75) 39-75 PVP32.sub.-- ASFB7 PHOSPHOPROTEIN P32 AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 39-75 PVP35.sub.-- EBOV POLYMERASE COMPLEX EBOLA VIRUS 83-119 PROTEIN VP35 PVP35.sub.-- MABVM POLYMERASE COMPLEX MARBURG VIRUS (STRAIN MUSOKE) 80-107 231-258 PROTEIN VP35 PVP35.sub.-- MABVP POLYMERASE COMPLEX MARBURG VIRUS (STRAIN POPP) 80-107 231-258 PROTEIN VP35 PVP35.sub.-- NPVAC EARLY 35 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 270-297 POLYHEDROSIS VIRUS PVP35.sub.-- NPVBM EARLY 35 KD PROTEIN BOMBYX MORI NUCLEAR POLYHEDROSIS VIRUS 68-102 PVP35.sub.-- VACCV IMMUNODOM ENV PRO P35 VACCINIA VIRUS (STRAIN WR) 178-205 PVP39.sub.-- NPVAC MAJOR CAPSID PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 134-161 264-291 POLYHEDROSIS VIRUS PVP39.sub.-- NPVOP MAJOR CAPSID PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 263-290 POLYHEDROSIS VIRUS PVP3.sub.-- AHSV4 VP3 CORE PROTEIN AFRICAN HORSE SICKNESS VIRUS 132-159 (SEROTYPE 4/STRAIN VACCINE) PVP3.sub.-- BTV10 VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 214-252 PVP3.sub.-- BTV17 VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 17/ISOLATE USA) 214-252 PVP3.sub.-- BTV1A VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 214-252 AUSTRALIA) PVP3.sub.-- EHDV1 VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 209-243 798-832 (SEROTYPE 1) PVP3.sub.-- EHDVA VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 798-832 (SEROTYPE 2/STRAIN AUSTRAL PVP3.sub.-- GFLV P3 PROTEIN GRAPEVINE FANLEAF VIRUS 99-133 PVP3.sub.-- ROTPC INNER CORE PROTEIN VP3 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 39-66 329-384 PVP3.sub.-- ROTS1 INNER CORE PROTEIN VP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 26-67 350-377 451-497 619-692 PVP40.sub.-- EBV CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS (STRAIN B95-8) 440-470 PVP40.sub.-- HSVSA CAPSID PROTEIN P40 HERPESVIRUS SAIMIRI (STRAIN 11) 205-232 344-372 PVP40.sub.-- ILTVR CAPSID PROTEIN P40 INFECTIOUS LARYNGOTRACHEITIS VIRUS 515-549 (STRAIN THORNE V882) PVP40.sub.-- VZVD CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 174-208 495-522 PVP41.sub.-- ROTS1 OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 8-35 589-619 PVP41.sub.-- ROTS1 OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 8-35 584-622 PVP4A.sub.-- VACCC MAJOR CORE PROTEIN P4A VACCINIA VIRUS (STRAIN COPENHAGEN) 48-75 PRECURSOR PVP4A.sub.-- VACCV MAJOR CORE PROTEIN P4A VACCINIA VIRUS (STRAIN WR) 48-75 PRECURSOR PVP4A.sub.-- VARV MAJOR CORE PROTEIN P4A VARIOLA VIRUS 48-75 PRECURSOR PVP4B.sub.-- FOWPV MAJOR CORE PROTEIN P4B FOWLPOX VIRUS 80-110 PRECURSOR PVP4B.sub.-- VACCC MAJOR CORE PROTEIN P4B VACCINIA VIRUS (STRAIN COPENHAGEN) 7-37 PRECURSOR PVP4B.sub.-- VACCV MAJOR CORE PROTEIN P4B VACCINIA VIRUS (STRAIN WR) 7-37 PRECURSOR PVP4B.sub.-- VARV MAJOR CORE PROTEIN P4B VARIOLA VIRUS 7-37 PRECURSOR PVP4.sub.-- BTV10 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 34-61 576-603 PVP4.sub.-- BTV11 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA) 34-61 576-603 PVP4.sub.-- BTV13 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 34-61 576-603 PVP4.sub.-- BTV2A OUTER CAPSID PROTEIN VP4 NEBRASKA CALF DIARRHEA VIRUS 552-622 (STRAIN NCDV-LINCOLN) PVP4.sub.-- NCDV OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS (SEROTYPE 6/STRAIN B641) 595-629 PVP4.sub.-- ROTB4 OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS (STRAIN C486) 8-35 584-622 PVP4.sub.-- ROTBC OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS (STRAIN UK) 595-629 PVP4.sub.-- ROTBU OUTER CAPSID PROTEIN VP4 EQUINE ROTAVIRUS (STRAIN H-2) 112-146 235-269 552-629 PVP4.sub.-- ROTEH OUTER CAPSID PROTEIN VP4 ROTAVIRUS (GROUP B/STRAIN IDIR) 5-32 PVP4.sub.-- ROTG1 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN 1076) 8-35 572-628 PVP4.sub.-- ROTH1 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN RV-5) 8-35 279-306 565-621 PVP4.sub.-- ROTH5 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN 69M) 8-35 112-139 584-629 PVP4.sub.-- ROTH6 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN 69M) 8-35 279-306 565-621 PVP4.sub.-- ROTHD OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN DS1) 8-35 279-306 565-621 PVP4.sub.-- ROTHJ OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (STRAIN K8) 8-35 111-138 PVP4.sub.-- ROTHK OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (STRAIN KU) 8-35 77-104 279-306 577-621 PVP4.sub.-- ROTHL OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (STRAIN L26) 8-35 279-306 565-621 PVP4.sub.-- ROTHM OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN M37) 8-35 572-610 PVP4.sub.-- ROTHN OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN MCN13) 8-35 573-628 PVP4.sub.-- ROTHP OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN P) 8-35 577-621 PVP4.sub.-- ROTHR OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN RRV) 8-35 105-135 235-262 PVP4.sub.-- ROTHT OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 4/STRAIN 8-35 572-627 ST. THOMAS 3) PVP4.sub.-- ROTHV OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 4/STRAIN VA70) 8-35 279-306 590-617 PVP4.sub.-- ROTHW OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 8-35 577-621 PVP4.sub.-- ROTP5 OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (SEROTYPE 5/STRAIN OSU) 112-146 584-625 PVP4.sub.-- ROTPC OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 5-33 115-161 293-320 PVP4.sub.-- ROTPG OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (STRAIN GOTTFRIED) 8-35 572-628 PVP4.sub.-- ROTPY OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (STRAIN YM) 8-35 112-146 584-625 PVP4.sub.-- ROTRH OUTER CAPSID PROTEIN VP4 RHESUS ROTARVIRUS 8-38 584-622 PVP4.sub.-- ROTSF OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11-FEM) 8-35 589-619 PVP4.sub.-- ROTSS OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11-SEM) 8-35 130-157 584-622 PVP4.sub.-- WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 28-62 PNS4 PVP5.sub.-- AHSV4 OUTER CAPSID PROTEIN VP5 AFRICAN HORSES SICKNESS VIRUS 113-183 191-218 (SEROTYPE 4/STRAIN VACCINE) PVP5.sub.-- BTV10 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 53-80 99-126 PVP5.sub.-- BTV11 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 11/ISOLATE USA) 53-80 92-126 PVP5.sub.-- BTV13 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA) 53-80 PVP5.sub.-- BTV1A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 53-80 89-126 AUSTRALIA) PVP5.sub.-- BTV1S OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 53-80 92-126 148-182 SOUTH AFRICA) PVP5.sub.-- BTV2A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 53-80 89-126 PVP5.sub.-- EHDV1 OUTER CAPSID PROTEIN VP5 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 31-80 191-218 399-426 (SEROTYPE 1) PVP5.sub.-- WTV OUTER CAPSID PROTEIN VP5 WOUND TUMOR VIRUS 648-675 PVP61.sub.-- BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 161-193 PVP61.sub.-- MRDV PROB NONSTRUCT 41.0 KD PRO MAIZE ROUGH DWARF VIRUS 153-202 PVP61.sub.-- NPVAC 61 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 36-63 POLYHEDROSIS VIRUS PVP62.sub.-- BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 157-189 PVP64.sub.-- NPVOP MAJOR ENV GLYCOPRO ORGYIA PSEUDOTSUGATA MULTICAPSID 45-72 PRECURSOR POLYHEDROSIS VIRUS PVP67.sub.-- NPVAC MAJOR ENV GLYCOPRO AUTOGRAPHA CALIFORNICA NUCLEAR 44-81 PRECURSOR POLYHEDROSIS VIRUS PVP6.sub.-- BTV11 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 11/ISOLATE USA) 157-189 PVP6.sub.-- BTV13 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA) 157-189 PVP6.sub.-- BTV17 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 17/ISOLATE USA) 157-189 PVP6.sub.-- BTV1S VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 161-193 SOUTH AFRICA) PVP6.sub.-- BTV2A VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 133-172 PVP6.sub.-- RDV STRUCTURAL PROTEIN P6 RICE DWARF VIRUS 10-37 354-381 PVP74.sub.-- NPVAC P74 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 413-440 POLYHEDROSIS VIRUS PVP75.sub.-- HSVSA PROBABLE MEMBRAND HERPESVIRUS SAIMIRI (STRAIN 11) 181-208 929-977 ANTIGEN 75 PVP79.sub.-- NPVAC 79 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 44-78 370-397 POLYHEDROSIS VIRUS PVP7.sub.-- EHDV1 VP7 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 16-43 (SEROTYPE 1) PVP7.sub.-- WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 458-485 PNS7 PVP80.sub.-- NPVAC CAPSID PROTEIN P80 AUTOGRAPHA CALIFORNICA NUCLEAR 101-142 240-298 POLYHEDROSIS VIRUS PVP87.sub.-- NPVOP CAPSID PROTEIN P87 ORGYIA PSEUDOTSUGATA MULTICAPSID 132-159 POLYHEDROSIS VIRUS PVP8.sub.-- BTV10 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 105-132 PVP8.sub.-- FOWPV STRUCTURAL PROTEIN VP8 FOWLPOX VIRUS 211-238 PRECURSOR PVP8.sub.-- WTV OUTER CAPSID PROTEIN P8 WOUND TUMOR VIRUS 29-56 112-143 PVP9.sub.-- RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 197-224 PNS9 PVP9.sub.-- WTV STRUCTURAL PROTEIN P9 WOUND TUMOR VIRUS 22-49 PVP9.sub.-- WTNVJ STRUCTURAL PROTEIN P9 WOUND TUMOR VIRUS (STRAIN NJ) 22-49 PVPHE.sub.-- NPVAC 29 KD POLYHEDRAL ENVELOPE AUTOGRAPHA CALIFORNICA NUCLEAR 196-223 PROTEIN POLYHEDROSIS VIRUS PVPHE.sub.-- NPVOP 32 KD POLYHEDRAL ENVELOPE ORGYIA PSEUDOTSUGATA MULTICAPSID 127-186 238-265 PROTEIN POLYHEDROSIS VIRUS PVPRT.sub.-- ADEM1 ENDOPROTEASE MOUSE ADENOVIRUS TYPE 1 167-194 PVPU.sub.-- HV1A2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 3-31 (ARV2/SF2 ISOLATE) PVPU.sub.-- HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (BH10 AND HXB3 ISOLATES) PVPU.sub.-- HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 21-48 (BH8 ISOALTE) PVPU.sub.-- HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-49 (BRAIN ISOLATE) PVPU.sub.-- HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (BRU ISOLATE) PVPU.sub.-- HV1C4 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 3-30 (CDC-451 ISOLATE) PVPU.sub.-- HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 6-33 (ELI ISOLATE) PVPU.sub.-- HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (HXB2 ISOLATE) PVPU.sub.-- HV1J3 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 2-29 (JH3 ISOLATE) PVPU.sub.-- HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-49 (JRCSF ISOLATE) PVPU.sub.-- HV1MA VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-32 (MAL ISOLATE) PVPU.sub.-- HV1ND VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 6-33 (NDK ISOLATE) PVPU.sub.-- HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (PV22 ISOLATE) PVPU.sub.-- HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-49 (SF162 ISOLATE) PVPU.sub.-- SIVCZ VPU PROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 51-78 PVPX.sub.-- LDV VPX PROTEIN LACTATE DEHYDROGENASE-ELEVATING VIRUS 64-94 PVRNA.sub.-- BSMV ALPHA-A PROTEIN BARLEY STRIPE MOSAIC VIRUS 1051- 1078 PVS06.sub.-- ROTBS VP6 PROTEIN BOVINE ROTAVIRUS (GROUP C/STRAIN SHINTOKU) 6-43 PVS06.sub.-- ROTGA VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV) 114-144 PVS06.sub.-- ROTGI VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN IDIR) 28-55 PVS06.sub.-- ROTHC VP6 PROTEIN HUMAN ROTAVIRUS 9-44 PVS06.sub.-- ROTPC VP6 PROTEIN PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 9-44 PVS07.sub.-- ROTBJ GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN KN-4) 2-29 PVS07.sub.-- ROTBU NONSTRUCTURAL PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 91-146 199-236 NCVP3 PVS07.sub.-- ROTP5 NONSTRUCTURAL PROTEIN PORCINE ROTAVIRUS (SEROTYPE 5/STRAIN OSU) 91-146 202-236 NCVP3 PVS07.sub.-- ROTS1 NONSTRUCTURAL PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 91-146 199-236 NCVP3 PVS08.sub.-- ROTBU NONSTRUCTURAL PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 164-201 NS2/VP9 PVS08.sub.-- ROTS1 NONSTRUCTURAL PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 164-201 217-251 NCVP4 PVS09.sub.-- ROTB4 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 6/STRAIN B641) 2-29 PVS09.sub.-- ROTB5 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN A5) 2-29 PVS09.sub.-- ROTBU GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN UK) 2-29 PVS09.sub.-- ROTGA GLYCOPROTEIN VP7 ROTAVIRUS (GROUP B/STRAIN ADRV) 210-237 PRECURSOR PVS09.sub.-- ROTH4 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 4/STRAIN RV-4) 2-29 PVS09.sub.-- ROTHA GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN HU5) 2-29 PVS09.sub.-- ROTHB GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE G/STRAIN B37) 2-29 PVS09.sub.-- ROTHD GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN DS1) 2-29 PVS09.sub.-- ROTHH GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN HN126) 2-29 PVS09.sub.-- ROTHM GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN M37) 2-29 PVS09.sub.-- ROTHO GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN MO 2-29 AND STRAIN D) PVS09.sub.-- ROTHP GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN P) 2-29 PVS09.sub.-- ROTHS GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN S2) 2-29 PVS09.sub.-- ROTHW GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 2-29 PVS09.sub.-- ROTP2 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 3/STRAIN AT/76) 2-29 PVS09.sub.-- ROTP3 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 3/STRAIN CRW-8) 2-29 PVS09.sub.-- ROTS1 GLYCOPROTEIN VP7 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 2-29 PVS10.sub.-- ROTBS MINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (GROUP C/STRAIN SHINTOKU) 125-152 PVS10.sub.-- ROTS1 NONSTRUCTURAL GLYCO- SIMIAN 11 ROTAVIRUS (STRAIN SA11) 113-140 PROTEIN NCVP5 PVS11.sub.-- ROTBU MINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 13-40 114-145 PVS11.sub.-- ROTBV MINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (STRAIN VMRI) 13-40 114-145 PVS11.sub.-- ROTGA NONSTRUCTURAL PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV) 31-60 (ADULT DIARRHEA ROTAVIRUS) PVS11.sub.-- ROTH5 MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN RV-5) 13-40 111-145 PVS11.sub.-- ROTHD MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN DS1) 13-40 111-145 PVS11.sub.-- ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 111-145 PVS11.sub.-- ROTRA MINOR OUTER CAPSID PROTEIN RABBIT ROTAVIRUS (STRAIN ALABAMA) 118-145 PVS11.sub.-- ROTS1 MINOR OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 111-146 PVSH.sub.-- MUMP1 SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS 9-46 PVSH.sub.-- MUMPA SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MATSUYAMA) 12-41 PVSH.sub.-- MUMPB SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BELFAST) 9-41 PVSH.sub.-- MUMPE SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN ENDERS) 9-46 PVSH.sub.-- MUMPJ SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN JERYL-LYNN) 9-46 PVSH.sub.-- MUMPK SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN KILHAM) 9-46 PVSH.sub.-- MUMPL SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BRISTOL 1) 9-46 PVSH.sub.-- MUMPM SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 12-41 PVSH.sub.-- MUMPR SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN RW) 9-41 PVSH.sub.-- MUMPU SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN URABE VACCINE AM9) 12-41 PVSI1.sub.-- REOVD SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 3/STRAIN DEARING) 26-63 71-122 127-168 222-259 PVSI1.sub.-- REOVJ SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 2/STRAIN D5/JONES) 4-104 130-193 PVSI1.sub.-- REOVL SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 1/STRAIN LANG) 4-52 75-104 112-160 PVSI2.sub.-- REOVD SIGMA 2 PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 350-384 PVSI3.sub.-- REOVJ SIGMA 3 PROTEIN REOVIRUS (TYPE 2/STRAIN D5/JONES) 289-316 PVSIS.sub.-- REOVD SIGMA 1-S PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 90-117 PVSIS.sub.-- REOVL SIGMA 1-S PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 50-77 PVT3A.sub.-- CAPV1 PROTEIN T3A CAPRIPOXVIRUS (STRAIN INS-1) 124-158 PVT5.sub.-- SFVKA PROTEIN T5 SHOPE FIBROMA VIRUS (STRAIN KASZA) 250-277 PVTER.sub.-- EBV PROBABLE DNA PACKAGING EPSTEIN-BARR VIRUS (STRAIN B95-8) 234-290 PROTEIN PVTER.sub.-- HCMVA PROBABLE DNA PACKAGING HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 417-451 PROTEIN PVTER.sub.-- HSV6U PROBABLE DNA PACKAGING HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 176-203 UGANDA-1102) PVTER.sub.-- HSVI1 PROBABLE DNA PACKAGING ICTALURID HERPESVIRUS 1 710-737 PROTEIN PVTER.sub.-- VZVD PROBABLE DNA PACKAGING VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 394-321 PROTEIN PVTP3.sub.-- TTV1V VIRAL PROTEIN TPX THERMOPROTEUS TENAX VIRUS 1 (STRAIN VT3) 169-196 PVTPX.sub.-- TTV1 VIRAL PROTEIN TPX THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 169-196 PVV.sub.-- PI4HA V PROTEIN HUMAN PARAINFLUENZA 4A VIRUS 4-38 (STRAIN TOSHIBA) PY101.sub.-- SSV1 HYPOTHETICAL 10.1 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 25-65 PROTEIN PY108.sub.-- SSV1 HYPOTHETICAL 10.8 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 4-61 PROTEIN PY119.sub.-- SSV1 HYPOTHETICAL 11.9 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 30-78 PROTEIN PY11K.sub.-- TYDVA HYPOTHETICAL 11.2 KD TOBACCO YELLOW DWARF VIRUS 53-87 PROTEIN (STRAIN AUSTRALIA) PY13K.sub.-- NPVAC HYPOTH 13.1 KD IN 39 KD AUTOGRAPHA CALIFORNICA NUCLEAR 85-112 5'REGION POLYHEDROSIS VIRUS PY13K.sub.-- SSV1 HYPOTHETICAL 13.2 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 59-86 PROTEIN PY14K.sub.-- SSV1 HYPOTHETICAL 13.7 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 5-39 PROTEIN PY16K.sub.-- NPVAC HYPOTH IN 39 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 80-107 5'REGION POLYHEDROSIS VIRUS PY16K.sub.-- SSV1 HYPOTHETICAL 15.6 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 77-111 PROTEIN PY17K.sub.-- SSV1 HYPOTHETICAL 17.8 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 9-36 119-153 PROTEIN PY18K.sub.-- MSVN HYPOTHETICAL 17.7 KD MAIZE STREAK VIRUS (NIGERIAN ISOLATE) 34-61 PROTEIN PY18K.sub.-- MSVS HYPOTHETICAL 17.2 KD MAIZE STREAK VIRUS (SOUTH-AFRICAN ISOLATE) 34-61 PROTEIN PY20K.sub.-- SSV1 HYPOTHETICAL 20.4 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 76-103 PROTEIN PY28K.sub.-- SSV1 HYPOTHETICAL 28.5 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 93-164 PROTEIN PY2.sub.-- SOCMV HYPOTHETICAL PROTEIN 2 SOYBEAN CHLOROTIC MOTTLE VIRUS 118-148 PY31K.sub.-- SSV1 HYPOTHETICAL 31.5 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 24-97 PROTEIN PY32K.sub.-- SSV1 HYPOTHETICAL 31.7 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 233-267 PROTEIN PY38K.sub.-- NPVAC HYPOTHETICAL 37.7 KD AUTOGRAPHA CALIFORNICA NUCLEAR 133-184 PROTEIN POLYHEDROSIS VIRUS PY3.sub.-- SOCMV HYPOTHETICAL PROTEIN 3 SOYBEAN CHLOROTIC MOTTLE VIRUS 122-149 PY7.sub.-- SOCMV HYPOTHETICAL PROTEIN 7 SOYBEAN CHLOROTIC MOTTLE VIRUS 56-94 PY85K.sub.-- SSV1 HYPOTHETICAL 85.7 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 81-121 546-573 658-700 PROTEIN PY8.sub.-- SOCMV HYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE VIRUS 13-40 PYB01.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF1 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 74-108 152-179 184-218 PROTEIN PYB05.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF5 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 62-89 PROTEIN PYB10.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF10 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 162-197 214-241 PROTEIN PYB12.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF12 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 11-38 PYB13.sub.-- FOWPM HYPOTHETICAL BAMHI-ORF13 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 128-167 PYBL3.sub.-- FOAMV BEL-3 PROTEIN HUMAN SPUMARETROVIRUS 87-116 PYDH1.sub.-- HSVS7 HYPOTH 24.1 KD IN DHFR HERPESVIRUS SAIMIRI (STRAIN 484-77) 161-188 3'REGION PYDH1.sub.-- HSVSC HYPOTH 28.7 KD IN DHFR HERPESVIRUS SAIMIRI (SUBGROUP C/STRAIN 488) 52-82 3'REGION PYDH4.sub.-- HSVS7 HYPOTH 9.9 KD IN DHFR HERPESVIRUS SAIMIRI (SUBGROUP C/STRAIN 488) 53-83 3'REGION PYF26.sub.-- FOWP1 HYPOTHETICAL 25.9 KD FOWLPOX VIRUS (STRAIN FP-1) 8-35 PROTEIN PYF30.sub.-- FOWP1 HYPOTHETICAL 30.9 KD FOWLPOX VIRUS (STRAIN FP-1) 170-204 PROTEIN PYH22.sub.-- VACCV HYPOTH 21.7 KD HINDIII-C PRO VACCINIA VIRUS (STRAIN WR) 37-64 95-126 144-171 PYHR3.sub.-- VACCV HYPOTH HOST RANGE 27.4 KD VACCINIA VIRUS (STRAIN WR) 31-58 179-206 PRO PYKR2.sub.-- EBV HYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS (STRAIN B95-8) 90-121 PROTEIN PYKR4.sub.-- EBV HYPOTHETICAL BKRF4 EPSTEIN-BARR VIRUS (STRAIN B95-8) 19-53 PYL15.sub.-- ADE41 HYPOTH 12.4 KD IN 33 KD HUMAN ADENOVIRUS TYPE 4) 47-86 REGION PYLR3.sub.-- EBV HYPOTHETICAL BLRF3 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 27-54 PYOR1.sub.-- COYMV HYPOTHETICAL 23 KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS 94-143 PYOR2.sub.-- COYMV HYPOTHETICAL 15 KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS 35-76 PYOR3.sub.-- WCMVM HYPOTHETICAL 13 KD PROTEIN WHITE CLOVER MOSAIC VIRUS (STRAIN M) 64-94 PYOR3.sub.-- WCMVO HYPOTHETICAL 13 KD PROTEIN WHITE CLOVER MOSAIC VIRUS (STRAIN O) 65-95 PYOR5.sub.-- ADEG1 HYPOTHETICAL 31.5 KD AVIAN ADENOVIRUS GALI (STRAIN PHELPS) 92-119 PROTEIN PYORA.sub.-- TTV1 HYPOTHETICAL 8.1 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 23-57 PYORL.sub.-- TTV1 HYPOTHETICAL 26.8 KD THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 15-42 PROTEIN PYORQ.sub.-- TTV1 HYPOTHETICAL 7.3 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 3-31 PROTEIN PYORW.sub.-- TTV1 HYPOTHETICAL 12.1 KD THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 4-40 PROTEIN PYP12.sub.-- RTBV HYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 44-71 PYP12.sub.-- RTBVP HYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 44-71 (ISOLATE PHILIPPINES) 44-71 PYP24.sub.-- RTBV HYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 59-101 106-157 PYP24.sub.-- RTBVP HYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 51-101 106-157 (ISOLATE PHILIPPINES) PYP46.sub.-- RTBV HYPOTHETICAL P46 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 58-107 197-231 PYP46.sub.-- RTBVP HYPOTHETICAL P46 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 58-107 197-231 (ISOLATE PHILIPPINES) PYP63.sub.-- NPVAC HYPOTH PRO P6.5 5'REGION AUTOGRAPHA CALIFORNICA NUCLEAR 44-71 POLYHEDROSIS VIRUS PYP63.sub.-- NPVOP HYPOTH 40.0 KD IN P6.5 ORGYIA PSEUDOTSUGATA MULTICAPSID POLYHEDROSIS VIRUS 325-352 5'REGION PYPOH.sub.-- NPVAC HYPOTH 23.6 KD IN AUTOGRAPHA CALIFORNICA NUCLEAR 116-153 POLYHEDRIN 5'REGION POLYHEDROSIS VIRUS PYPOL.sub.-- IPNVN HYPOTHETICAL 17.0 KD INFECTIOUS PANCREATIC NECROSIS VIRUS 5-32 PROTEIN (STRAIN N1) PYQ3.sub.-- AMEPV HYPOTHETICAL PROTEIN IN AMSACTA MOOREI ENTOMOPOXVIRUS 8-57 59-96 156-183 TK 3'REGION PYRF1.sub.-- HSV6G HYPOTHETICAL PROTEIN RF1 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 208-235 PYRF2.sub.-- HSV6G HYPOTHETICAL PROTEIN RF2 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 223-257 268-299 PYRF3.sub.-- HSV6G HYPOTHETICAL PROTEIN RF3 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 141-168 PYRF4.sub.-- HSV6G HYPOTHETICAL PROTEIN RF4 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 404-441 PYRP2.sub.-- IRV6 REPETITIVE PROTEIN ORF2 CHILO IRIDESCENT VIRUS 10-45 PYVAG.sub.-- VACCC HYPOTHETICAL 9.3 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 7-34 PYVAH.sub.-- VACCC HYPOTHETICAL 14.5 KD VACCINIA VIRUS (STRAIN COPENHAGEN) 81-112 PROTEIN PYVDB.sub.-- VACCC HYPOTHETICAL 8.5 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 29-77 PYVDB.sub.-- VACCV HYPOTHETICAL 8.5 KD PROTEIN VACCINIA VIRUS (STRAIN WR) 46-77 PYVDH.sub.-- VACCV HYPOTHETICAL 7.2 KD PROTEIN VACCINIA VIRUS (STRAIN WR) 20-50 PYVGB.sub.-- VACCC HYPOTHETICAL 8.4 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 10-44 PYZL2.sub.-- EBV HYPOTHETICAL BZLF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 152-179 - 107 .times. 178 .times. 4 SEARCH MOTIF RESULTS SUMMARY (PREFERRED VIRAL SEQUENCES ) PCGENE 107 .times. 178 .times. 4 All Viruses (no bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 PPOL.sub.-- MLVAK POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 453-480 PENV.sub.-- MLVAV ENV POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 517-544 PPOL.sub.-- MLVAV POL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 805-832 PMYC.sub.-- AVIM2 MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS 232-266 375-402 VIRUS CMII PMYC.sub.-- AVIMD MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS 233-267 376-403 VIRUS HBI PMYC.sub.-- AVIMC MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS 233-267 376-403 VIRUS MC29 VL1.sub.-- FPVL PROBABLE L1 PROTEIN AVIAN PAPILLOMA VIRUS 38-65 FPV-L PVGLB.sub.-- HSVB1 GLYCOPROTEIN I BOVINE HERPES VIRUS TYPE 1 427-454 PRECURSOR PRIR2.sub.-- HSVB3 RIBONUC-DIPHOSPH REDUCT BOVINE HERPES VIRUS TYPE 1 90-117 SMALL CHA (STRAIN 34) PVGLB.sub.-- HSVB2 GLYCOPROTEIN B-1 BOVINE HERPES VIRUS TYPE 2 447-474 PRECURSOR (STRAIN BMV) PENV.sub.-- BIV06 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY 17-44 544-603 631-695 VIRUS (ISOLATE 106) PENV.sub.-- BIV27 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY 17-44 573-632 660-724 (ISOLATE 127) PENV.sub.-- BLVAF ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (AMERICAN ISOLATE FLK) PENV.sub.-- BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (AMERICAN ISOLATE VDM) PENV.sub.-- BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (AUSTRALIAN ISOLATE) PENV.sub.-- BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 311-377 (BELGIUM ISOLATE LB285) PENV.sub.-- BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (BELGIUM ISOLATE LB59) PENV.sub.-- BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (JAPANESE ISOLATE BLV-1) PHEMA.sub.-- P13B HEMAGGLUTININ- BOVINE PARAINFLUENZA 3 66-93 NEURAMINIDAS E VIRUS PRRPP.sub.-- P13B RNA POLYMERASE ALPHA BOVINE PARAINFLUENZA 3 34-91 255-282 285-314 SUBUNIT VIRUS PVGLF.sub.-- P13B FUSION GLYCOPROTEIN BOVINE PARAINFLUENZA 3 115-182 207-241 459-497 PRECURSOR VIRUS PVMAT.sub.-- P13B MATRIX PROTEIN BOVINE PARAINFLUENZA 3 201-231 VIRUS PRRPP.sub.-- BRSVA RNA POLYMERASE ALPHA BOVINE RESPIRATORY 99-133 SUBUNIT SYNCYTIAL VIRUS (STRAIN A51908) PVGLF.sub.-- BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY 38-65 154-202 216-243 442-469 486-531 PRECURSOR SYNCYTIAL VIRUS (STRAIN A51908) PVMA2.sub.-- BRSVA MATRIX GLYCOPROTEIN M2 BOVINE RESPIRATORY 124-152 SYNCYTIAL VIRUS (STRAIN A51908) PVMAT.sub.-- BRSVA MATRIX PROTEIN BOVINE RESPIRATORY 219-246 SYNCYTIAL VIRUS (STRAIN A51908) PVGLF.sub.-- BRSVC FUSION GLYCOPROTEIN BOVINE RESPIRATORY 38-65 154-202 216-243 444-471 488-533 PRECURSOR SYNCYTIAL VIRUS (STRAIN COPENHAGEN) PVGLG.sub.-- BRSVC MAJOR SURFACE BOVINE RESPIRATORY 92-123 GLYCOPROTEIN G SYNCYTIAL VIRUS (STRAIN COPENHAGEN) PVGLF.sub.-- BRSVR FUSION GLYCOPROTEIN BOVINE RESPIRATORY 38-65 154-202 216-243 444-471 488-533 PRECURSOR SYNCYTIAL VIRUS (STRAIN RB94) PENV.sub.-- MLVCB ENV POLYPROTEIN CAS-BR-E MURINE LEUKEMIA 510-539 VIRUS PENV.sub.-- SIVCZ ENV POLYPROTEIN CHIMPANZEE IMMUNO- 160-187 253-289 336-366 526-584 627-654 DEFICIENCY VIRUS PVPU.sub.-- SIVCZ VPU PROTEIN CHIMPANZEE IMMUNO- 51-78 DEFICIENCY VIRUS PPOL.sub.-- SIVCZ POL POLYPROTEIN CHIMPANZEE IMMUNO- 242-269 626-685 DEFICIENCY VIRUS (SIV(CPZ)) PVE2.sub.-- CRPVK PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE) 5-34 PAPILLOMAVIRUS (STRAIN KANSAS) VL1.sub.-- CRPVK PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) 331-383 PAPILLOMAVIRUS (STRAIN KANSAS) PPOLG.sub.-- DEN1S GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 1858-1885 2890-2935 2989-3016 SINGAPORE S275/90) PPOLG.sub.-- DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2908-2935 2982-3016 3117-3147 16681) PPOLG.sub.-- DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2485-2519 2908-2935 2982-3016 3117-3147 16681-PDK53) PPOLG.sub.-- DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2908-2935 3117-3147 3346-3373 JAMAICA PPOLG.sub.-- DEN2P GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2905-2932 2979-3013 3114-3144 3343-3370 PR159/S1) PPOLG.sub.-- DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1134-1161 1448-1475 TONGA 1974) PPOLG.sub.-- DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 837-864 142-1569 1857-1884 2494-2521 2980-3014 3345-3372 PPOLG.sub.-- DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 2885-2930 2977-3011 3342-3369 PDPOL.sub.-- HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS 5-39 SHANGHAI DUCK ISOLATE S5) PDPOL.sub.-- HPBDC DNA POLYMERASE DUCK HEPATITIS B VIRUS 5-39 (STRAIN CHINA) PDPOL.sub.-- HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS 5-39 304-331 (WHITE SHANGHAI DUCK ISOLATE S31) PTEGU.sub.-- EBV LARGE TEGUMENT EPSTEIN-BARR VIRUS (STRAIN 145-172 1215-1242 1344-1371 1876-1903 PROTEIN B95-8) PUL06.sub.-- EBV VIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS (STRAIN 115-142 313-340 542-569 B95-8) PUL11.sub.-- EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 15-42 BBLF1 B95-8) PUL52.sub.-- EB PROB DNA REPLICATION EPSTEIN-BARR VIRUS (STRAIN 185-212 787-814 B95-8) PUL87.sub.-- EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 409-436 B(C)RF1 B95-8) PUL92.sub.-- EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 107-144 168-196 BDLF4 B95-8) PVCAP.sub.-- EBV MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN 847-874 B95-8) PVGL2.sub.-- EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 68-102 GLYCOPROTEIN B95-8) PVGLB.sub.-- EBV GLYCOPROTEIN GP110 EPSTEIN-BARR VIRUS (STRAIN 95-122 631-658 PRECURSOR B95-8) PVGLH.sub.-- EBV GLYCOPROTEIN GP85 EPSTEIN-BARR VIRUS (STRAIN 549-576 619-648 PRECURSOR B95-8) PVGP8.sub.-- EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 104-149 ANTIGEN GP85 B95-8) PVP40.sub.-- EBV CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS (STRAIN 440-470 B95-8) PVTER.sub.-- EBV PROBABLE DNA EPSTEIN-BARR VIRUS (STRAIN 234-290 PACKAGING PROTEIN B95-8) PYKR2.sub.-- EBV HYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS (STRAIN 90-21 PROTEIN B95-8) PYKR4.sub.-- EBV HYPOTHETICAL BKRF4 EPSTEIN-BARR VIRUS (STRAIN 19-53 PROTEIN B95-8) PYLR3.sub.-- EBV HYPOTHETICAL BLRF3 EPSTEIN-BARR VIRUS (STRAIN 27-54 PROTEIN B95-8) PYZL2.sub.-- EBV HYPOTHETICAL BZLF2 EPSTEIN-BARR VIRUS (STRAIN 152-179 PROTEIN B95-8) PBZLF.sub.-- EBV BZLF1 TRANS-ACTIVATOR EPSTEIN-BARR VIRUS (STRAIN 193-220 PROTEIN B95-8) PDNB1.sub.-- EBV MAJOR DNA-BINDING EPSTEIN-BARR VIRUS (STRAIN 977-1004 1041-1068 PROTEIN B95-8) PEAR.sub.-- EBV EARLY ANTIGEN PROTEIN R EPSTEIN-BARR VIRUS (STRAIN 55-82 B95-8) PLMP1.sub.-- EBV LATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 148-175 PROTEIN 1 B95-8) PLMP2.sub.-- EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 294-321 B95-8) PLMP1.sub.-- EBVC LATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 148-175 PROTEIN 1 CAO) PLMP1.sub.-- EBVR LATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 148-175 PROTEIN 1 RAJI) PUL32.sub.-- HSVEB MAJOR ENVELOPE EQUINE HERPES VIRUS TYPE 1 345-375 GLYCOPROTEIN 300 PVGLC.sub.-- HSVEB GLYCOPROTEIN C EQUINE HERPES VIRUS TYPE 1 124-151 PRECURSOR PVGLB.sub.-- HSVE1 GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 1 443-470 934-961 PRECURSOR (ISOLATE HVS25A) PVGLB.sub.-- HSVEA GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 1 443-470 934-961 PRECURSOR (STRAIN AB1) PATI2.sub.-- HSVEB ALPHA TRANS-IND FACTOR EQUINE HERPES VIRUS TYPE 1 294-321 82 KD PRO (STRAIN AB4P) PATIN.sub.-- HSVEB ALPHA TRANS-IND PROTEIN EQUINE HERPES VIRUS TYPE 1 255-289 (STRAIN AB4P) PHELI.sub.-- HSVEB PROBABLE HELICASE EQUINE HERPES VIRUS TYPE 1 184-211 321-348 (STRAIN AB4P) PRIRI.sub.-- HSVEB RIBONUC-DIPHOSPH EQUINE HERPES VIRUS TYPE 1 75-102 REDUCT LARGE CHAS (STRAIN AB4P) PTEGU.sub.-- HSVEB LARGE TEGUMENT PROTEIN EQUINE HERPES VIRUS TYPE 1 229-256 566-593 1205-1232 (STRAIN AB4P) PUL06.sub.-- HSVEB VIRION GENE 56 PROTEIN EQUINE HERPES VIRUS TYPE 1 640-667 (STRAIN AB4P) PUL14.sub.-- HSVEB HYPOTHETICAL GENE 48 EQUINE HERPES VIRUS TYPE 1 247-286 PROTEIN (STRAIN AB4P) PUL21.sub.-- HSVEB GENE 40 PROTEIN EQUINE HERPES VIRUS TYPE 1 44-71 (STRAIN AB4P) PUL37.sub.-- HSVEB GENE 23 PROTEIN EQUINE HERPES VIRUS TYPE 1 715-749 987-1014 (STRAIN AB4P) PUL52.sub.-- HSVEB DNA REPLICATION PROTEIN EQUINE HERPES VIRUS TYPE 1 193-220 943-970 UL52 (STRAIN AB4P) PVG03.sub.-- HSVEB GENE 3 PROTEIN EQUINE HERPES VIRUS TYPE 1 146-176 (STRAIN AB4P) PVGLB.sub.-- HSVEB GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 1 443-470 934-961 PRECURSOR (STRAIN AB4P) PVGLG.sub.-- HSVEB GLYCOPROTEIN G EQUINE HERPES VIRUS TYPE 1 383-410 PRECURSOR (STRAIN AB4P) VIMP.sub.-- HSVEB PROB INTEGRAL MEMBRANE EQUINE HERPES VIRUS TYPE 1 147-174 PROTEIN (STRAIN AB4P) PVP26.sub.-- HSVEB CAPSI PROTEIN VP26 EQUINE HERPES VIRUS TYPE 1 36-63 (STRAIN AB4P) PVG03.sub.-- HSVEK GENE 3 PROTEIN EQUINE HERPES VIRUS TYPE 1 146-176 (STRAIN KENTUCKY A) PVGLB.sub.-- HSVEL GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 1 443-470 933-960 PRECURSOR (STRAIN KENTUCKY D) PCELF.sub.-- HSVEB CELL FUSION PROTEIN EQUINE HERPES VIRUS TYPE 1 312-339 PRECURSOR (STRAINS AB4P and Ky A) PUL47.sub.-- HSVE4 97 KD ALPHA TRANS-INDUCING EQUINE HERPES VIRUS TYPE 4 190-27 PVGLB.sub.-- HSVE4 GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 4 486-513 616-643 PRECURSOR PVGLG.sub.-- HSVE4 GLYCOPROTEIN G EQUINE HERPES VIRUS TYPE 4 271-298 PRECURSOR PDUT.sub.-- HSVE4 DEOXYU 5'-TRIPHOSPH EQUINE HERPES VIRUS TYPE 4 90-117 NUCHYDROLASE (STRAIN 1942) PVE2.sub.-- PAPVE PROBABLE E2 PROTEIN EUROPEAN ELK PAPILLOMA- 120-150 VIRUS PENV.sub.-- FIVPE ENV POLYPROTEIN FELINE IMMUNODEFICIENCY 650-680 722-749 VIRUS (ISOLATE PETALUMA) PPOL.sub.-- FIVPE POL POLYPROTEIN FELINE IMMUNODEFICIENCY 442-473 VIRUS (ISOLATE PETALUMA) PENV.sub.-- FIVSD ENV POLYPROTEIN FELINE IMMUNODEFICIENCY 639-668 720-747 VIRUS (ISOLATE SAN DIEGO) PENV.sub.-- FIVT2 ENV POLYPROTEIN FELINE IMMUNODEFICIENCY 640-679 721-748 VIRUS (ISOLATE TM2) PENV.sub.-- FLVC6 ENV POLYPROTEIN FELINE LEUKEMIA PROVIRUS 509-538 (CLONE CFE-6) PMYC.sub.-- FLVTT MYC TRANSFORMING FELINE LEUKEMIA PROVIRUS 393-420 PROTEIN FTT PMYC.sub.-- FLV MYC TRANSFORMING FELINE LEUKEMIA VIRUS 393-420 PROTEIN PENV.sub.-- FLVGL ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 490-519 (STRAIN A/GLASGOW-1) PENV.sub.-- FLVLB ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 510-539 (STRAIN LAMBDA-B1) PENV.sub.-- FLVSA ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 487-516 (STRAIN SARMA) PENV.sub.-- MLVF5 ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523-553 VIRUS (ISOLATE 57) PENV.sub.-- MLVTF ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523-553 VIRUS (ISOLATE FB29) PENV.sub.-- MLVFP ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523-553 VIRUS (ISOLATE PVC-211) PENV.sub.-- GALV ENV POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 176-203 523-564 PGAG.sub.-- GALV GAG POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 396-442 447-474 PPOL.sub.-- GALV POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 535-562 676-703 PDPOL.sub.-- HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS 271-325 VIRUS PPOLG.sub.-- HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1117-1149 1454-1481 18F) PPOLG.sub.-- HPAV2 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1117-1149 1454-1481 24A) PPOLG.sub.-- HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1117-1149 1454-1481 43C) PPOLG.sub.-- HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 CR326) PPOLG.sub.-- HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 182-216 GA76) PPOLG.sub.-- HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1103-1149 HM-175) PPOLG.sub.-- HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1103-1149 LA) PPOLG.sub.-- HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1103-1149 MBB) PDPOL.sub.-- HPBVP DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 456-483 ADW/STRAIN PHILIPPINO/ PFDW294) PDPOL.sub.-- HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 443-470 ADYW) PPOLG.sub.-- HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 702-729 PPOLG.sub.-- HCVBK GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 702-729 1045-1072 BK) PPOLG.sub.-- HCVH GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) 702-729 1045-1072 PPOLG.sub.-- HCJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 374-401 2089-2116 HC-J6) PPOLG.sub.-- HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1049-1076 2089-2116 HC-J8) PPOLG.sub.-- HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 702-729 1045-1072 HC-JT) PPOLG.sub.-- HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 378-405 702-729 1045-1072 JAPANESE) PPOLG.sub.-- HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 702-729 1045-1072 TAIWAN) PAANT.sub.-- HDVAM DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT.sub.-- HDVD3 DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT.sub.-- HDVS1 DELTA ANTIGEN HEPATITIS DELTA VIRUS 16-43 106-133 (ISOLATE AMERICAN) PAANT.sub.-- HDVS2 DELTA ANTIGEN HEPATITIS DELTA VIRUS 16-43 106-133 (ISOLATE AMERICAN) PAANT.sub.-- HDVWO DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT.sub.-- HDVIT DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT.sub.-- HDVM2 DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PPOLN.sub.-- HEVBU NON-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 219-246 349-376 PROTEIN BURMA) PPOLN.sub.-- HEVME NON-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 219-246 349-376 PROTEIN MEXICO) PPOLN.sub.-- HEVMY N-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 219-246 349-376 PROTEIN MYANMAR) PPOLN.sub.-- HEVPA NON-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 218-245 348-375 PROTEIN PAKISTAN) PDPOL.sub.-- HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS 5-39 PVMSA.sub.-- HPBHE MAJOR SURFACE ANTIGEN HERON HEPATITIS B VIRUS 294-328 PRECURSOR PIE63.sub.-- HSV11 TRANSCRIPTIONAL HERPES SIMPLEX VIRUS 248-275 REGULATOR (TYPE 1/STRAIN 17) PIE68.sub.-- HSV11 IMMEDIATE-EARLY HERPES SIMPLEX VIRUS 40-67 PROTEIN IE68 (TYPE 1/STRAIN 17) PTEGU.sub.-- HSV11 LARGE TEGUMENT HERPES SIMPLEX VIRUS 667-694 1673-1710 PROTEIN (TYPE 1/STRAIN 17) PUL06.sub.-- HSV11 VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS 586-613 (TYPE 1/STRAIN 17) PUL34.sub.-- HSV11 VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS 116-143 (TYPE 1/STRAIN 17) PUL37.sub.-- HSV11 PROTEIN UL37 HERPES SIMPLEX VIRUS 470-497 853-884 (TYPE 1/STRAIN 17) PUL42.sub.-- HSV11 DNA-BINDING PROTEIN UL42 HERPES SIMPLEX VIRUS 231-258 (TYPE 1/STRAIN 17) PUL47.sub.-- HSV11 VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS 488-515 (TYPE 1/STRAIN 17) PVGLC.sub.-- HSV11 GLYCOPROTEIN C HERPES SIMPLEX VIRUS 469-510 (TYPE 1/STRAIN 17) PAT12.sub.-- HSV11 ALPHA TRANS-IND FACTOR HERPES SIMPLEX VIRUS 308-335 78 KD PRO (TYPE 1/STRAIN 17) PUL47.sub.-- HSV1F VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS 488-515 (TYPE 1/STRAIN F) PAT12.sub.-- HSV1F ALPHA TRANS-IND FACTOR HERPES SIMPLEX VIRUS 308-335 77 KD PRO (TYPE 1/STRAIN F) PVGLC.sub.-- HSV1K GLYCOPROTEIN C HERPES SIMPLEX VIRUS 469-510 PRECURSOR (TYPE 1/STRAIN KOS) PVGLE.sub.-- HSV2 GLYCOPROTEIN E HERPES SIMPLEX VIRUS 111-148 PRECURSOR (TYPE 2) PTEGU.sub.-- HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 102-129 228-262 567-611 962-993 1098-1181 1661-1688 1884-1911 (TYPE 6/STRAIN GS) PVGLH.sub.-- HSV6G GLYCOPROTEIN H HERPES SIMPLEX VIRUS 62-89 360-403 PRECURSOR (TYPE 6/STRAIN GS) PYRF1.sub.-- HSV6G HYPOTHETICAL PROTEIN RF1 HERPES SIMPLEX VIRUS 208-235 (TYPE 6/STRAIN GS) PYRF2.sub.-- HSV6G HYPOTHETICAL PROTEIN RF2 HERPES SIMPLEX VIRUS 223-257 268-299 (TYPE 6/STRAIN GS) PYRF3.sub.-- HSV6G HYPOTHETICAL PROTEIN RF3 HERPES SIMPLEX VIRUS 141-168 (TYPE 6/STRAIN GS) PYRF4.sub.-- HSV6G HYPOTHETICAL PROTEIN RF4 HERPES SIMPLEX VIRUS 404-441 (TYPE 6/STRAIN GS) PP100.sub.-- HSV6J MAJOR ANTIGENIC HERPES SIMPLEX VIRUS 81-108 189-216 688-715 785-812 STRUCTL PROTEIN (TYPE 6/STRAIN UGANDA-1102) PUL87.sub.-- HSV6U HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS 536-563 729-768 (TYPE 6/STRAIN UGANDA-1102) PUL95.sub.-- HSV6U HYPOTHETICAL PROTEIN 13R HERPES SIMPLEX VIRUS 73-100 105-134 (TYPE 6/STRAIN UGANDA-1102) PVCAP.sub.-- HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS 136-170 355-382 (TYPE 6/STRAIN UGANDA-1102) PVTER.sub.-- HSV6U PROBABLE DNA PACKAGING HERPES SIMPLEX VIRUS 176-203 PROTEIN (TYPE 6/STRAIN UGANDA-1102) PTYSY.sub.-- HSVAT THYMIDYLATE SYNTHASE HERPES VIRUS ATELES 116-143 PDPOL.sub.-- HSVSA DNA POLYMERASE HERPES VIRUS SAIMIRI 625-652 (STRAIN 11) PDUT.sub.-- HSVSA DEOXYU 5'-TRIPHOSPH HERPES VIRUS SAIMIRI 179-213 NUCHYDROLASE (STRAIN 11) PHEL1.sub.-- HSVSA PROBABLE HELICASE HERPES VIRUS SAIMIRI 418-449 (STRAIN 11) PIC18.sub.-- HSVSA PROBABLE PROC & HERPES VIRUS SAIMIRI 58-85 482-522 TRANSPORT PRO (STRAIN 11) PIE68.sub.-- HSVSA IMMEDIATE-EARLY PROTEIN HERPES VIRUS SAIMIRI 48-78 (STRAIN 11) PKITH.sub.-- HSVSA THYMIDINE KINASE HERPES VIRUS SAIMIRI 340-386 (STRAIN 11) PRIR1.sub.-- HSVSA RIBONUC-DIPHOSPH HERPES VIRUS SAIMIRI 324-351 REDUCT LARGE CHA (STRAIN 11) PTEGU.sub.-- HSVSA PROBABLE LARGE HERPES VIRUS SAIMIRI 524-607 672-700 777-814 846-898 949-986 990-1017 1467-1497 2102-2135 TEGUMENT PROTEIN (STRAIN 11) PTYSY.sub.-- HSVSA THYMIDYLATE SYNTHASE HERPES VIRUS SAIMIRI 120-147 (STRAIN 11) PUL06.sub.-- HSVSA VIRION GENE 43 PROTEIN HERPES VIRUS SAIMIRI 15-42 302-358 368-402 (STRAIN 11) PUL25.sub.-- HSVSA VIRION GENE 19 PROTEIN HERPES VIRUS SAIMIRI 34-61 204-231 362-389 (STRAIN 11) PUL34.sub.-- HSVSA GENE 67 PROTEIN HERPES VIRUS SAIMIRI 208-235 (STRAIN 11) PUL37.sub.-- HSVSA GENE 63 PROTEIN HERPES VIRUS SAIMIRI 31-65 685-737 (STRAIN 11) PUL52.sub.-- HSVSA PROB DNA REP GENE 56 HERPES VIRUS SAIMIRI 130-157 PROTEIN (STRAIN 11) PUL73.sub.-- HSVSA HYPOTHETICAL GENE 53 HERPES VIRUS SAIMIRI 9-36 PROTEIN (STRAIN 11) PUL87.sub.-- HSVSA HYPOTHETICAL GENE 24 HERPES VIRUS SAIMIRI 582-609 PROTEIN (STRAIN 11) PUL92.sub.-- HSVSA HYPOTHETICAL GENE 31 HERPES VIRUS SAIMIRI 92-122 PROTEIN (STRAIN 11) PUNG.sub.-- HSVSA URACIL-DNA GLYCOSYLASE HERPES VIRUS SAIMIRI 135-176 (STRAIN 11) PVCAP.sub.-- HSVSA MAJOR CAPSID PROTEIN HERPES VIRUS SAIMIRI 769-799 (STRAIN 11) PVG45.sub.-- HSVSA HYPOTHETICAL GENE 45 HERPES VIRUS SAIMIRI 138-165 PROTEIN (STRAIN 11) PVG48.sub.-- HSVSA HYPOTHETICAL GENE 48 HERPES VIRUS SAIMIRI 360-394 PROTEIN (STRAIN 11) PVG52.sub.-- HSVSA HYPOTHETICAL GENE 52 HERPES VIRUS SAIMIRI 47-74 PROTEIN (STRAIN 11) PVGLH.sub.-- HSVSA GLYCOPROTEIN H HERPES VIRUS SAIMIRI 388-415 PRECURSOR (STRAIN 11) VIMP.sub.-- HSVSA INTEGRAL MEMBRANE HERPES VIRUS SAIMIRI 80-107 PROTEIN (STRAIN 11) PVP23.sub.-- HSVSA PROBABLE CAPSID PROTEIN HERPES VIRUS SAIMIRI 2-29 VP23 (STRAIN 11) PVP26.sub.-- HSVSA CAPSID PROTEIN VP26 HERPES VIRUS SAIMIRI 48-75 (STRAIN 11) PVP40.sub.-- HSVSA CAPSID PROTEIN P40 HERPES VIRUS SAIMIRI 205-232 344-372 (STRAIN 11) PVP75.sub.-- HSVSA PROBABLE MEMBRANE HERPES VIRUS SAIMIRI 181-208 929-977 ANTIGEN (STRAIN 11) PDNBI.sub.-- HSVSA MAJOR DNA-BINDING HERPES VIRUS SAIMIRI 333-368 512-539 PROTEIN (STRAIN 11) PCGH2.sub.-- HSVSA CYCLIN HOMOLOG HERPES VIRUS SAIMIRI 127-154 (STRAIN 11) PYDH1.sub.-- HSVS7 HYPOTH 24.1 KD IN DHFR HERPES VIRUS SAIMIRI 161-188 3'REGION (STRAIN 484-77) PYDH1.sub.-- HSVSC HYPOTH 28.7 KD IN DHFR HERPES VIRUS SAIMIRI 52-82 3'REGION (SUBGROUP C/STRAIN 488) PYDH4.sub.-- HSVSC HYPOTH 9.9 KD IN HERPES VIRUS SAIMIRI 53-83 3'REGION (SUBGROUP C/STRAIN 488) PENV.sub.-- MLVHO ENV POLYPROTEIN HOMULV MURINE LEUKEMIA 510-540 VIRUS PDPOL.sub.-- HCMVA DNA POLYMERASE HUMAN CYTOMEGALO VIRUS 753-780 (STRAIN AD169) PIC18.sub.-- HCMVA PROB PROC 7 TRANSPORT HUMAN CYTOMEGALO VIRUS 294-324 PRO UL56 (STRAIN AD169) PIR05.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 22-49 IRL5 (STRAIN AD169) PIR12.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 74-162 IRL12 (STRAIN AD169) PIR13.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 31-62 IRL13 (STRAIN AD169) PRIR1.sub.-- HCMVA RIBONUC-DIPHOSPH HUMAN CYTOMEGALO VIRUS 622-649 REDUCT LARGE CHA (STRAIN AD169) PTEGU.sub.-- HCMVA PROBABLE LARGE HUMAN CYTOMEGALO VIRUS 1251-1281 2202-2229 TEGUMENT PROTEIN (STRAIN AD169) PUL08.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 6-47 UL8 (STRAIN AD169) PUL13.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 347-374 UL13 (STRAIN AD169) PUL16.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 81-112 UL16 (STRAIN AD169) PUL20.sub.-- HCMVA HYPOTH PRO UL20 HUMAN CYTOMEGALO VIRUS 34-61 PRECURSOR (STRAIN AD169) PUL31.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 167-194 254-284 UL31 (STRAIN AD169) PUL35.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 533-562 UL35 (STRAIN AD169) PUL47.sub.-- HCMVA PROTEIN UL47 HUMAN CYTOMEGALO VIRUS 114-148 448-485 763-790 802-853 (STRAIN AD169) PUL50.sub.-- HCMVA PROTEIN UL50 HUMAN CYTOMEGALO VIRUS 159-186 (STRAIN AD169) PUL59.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 74-101 UL59 (STRAIN AD169) PUL70.sub.-- HCMVA PROB DNA REP PROTEIN UL70 HUMAN CYTOMEGALO VIRUS 65-92 (STRAIN AD169) PUL73.sub.-- HCMVA UL73 GLYCOPROTEIN HUMAN CYTOMEGALO VIRUS 5-73 PRECURSOR (STRAIN AD169) PUL74.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 45-79 UL74 (STRAIN AD169) PUL93.sub.-- HCMVA PROTEIN UL93 HUMAN CYTOMEGALO VIRUS 26-53 314-381 (STRAIN AD169) PUL95.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 37-71 UL95 (STRAIN AD169) PULA4.sub.-- HCMVA VIRION PROTEIN UL104 HUMAN CYTOMEGALO VIRUS 4-31 443-477 (STRAIN AD169) PULB9.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 33-78 UL119 (STRAIN AD169) PULD0.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 90-124 UL130 (STRAIN AD169) PUS09.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 20-47 HXLF3 (STRAIN AD169) PUS14.sub.-- HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALO VIRUS 277-308 HVLF4 (STRAIN AD169) PUS18.sub.-- HCMVA MEMBRANE PROTEIN HUMAN CYTOMEGALO VIRUS 191-218 HWLF5 (STRAIN AD169) PVGLB.sub.-- HCMVA GLYCOPROTEIN B HUMAN CYTOMEGALO VIRUS 25-88 397-424 440-467 851-878 PRECURSOR (STRAIN AD169) PVGLH.sub.-- HCMVA GLYCOPROTEIN H HUMAN CYTOMEGALO VIRUS 107-136 270-297 PRECURSOR (STRAIN AD169) PVGLI.sub.-- HCMVA IE GLYCOPROTEIN HUMAN CYTOMEGALO VIRUS 47-111 PRECURSOR (STRAIN AD169) PVTER.sub.-- HCMVA PROBABLE DNA HUMAN CYTOMEGALO VIRUS 417-451 PACKAGING PROTEIN (STRAIN AD169) PDNBI.sub.-- HCMVA MAJOR DNA-BINDING HUMAN CYTOMEGALO VIRUS 437-464 PROTEIN (STRAIN AD169) PV30K.sub.-- HCMVE 30 KD MAJOR EARLY HUMAN CYTOMEGALO VIRUS 194-221 PROTEIN (STRAIN EISENHARDT) PVGLB.sub.-- HCMVT GLYCOPROTEIN B HUMAN CYTOMEGALO VIRUS 50-88 397-424 435-462 852-879 PRECURSOR (STRAIN TOWNE) PVGLH.sub.-- HCMVT GLYCOPROTEIN H HUMAN CYTOMEGALO VIRUS 106-135 PRECURSOR (STRAIN TOWNE) PENV.sub.-- HV1A2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 544-592 630-682 790-825 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PGAG.sub.-- HV1A2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 91-118 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PPOL.sub.-- HV1A2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 219-245 620-661 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PVPU.sub.-- HV1A2 VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-31 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PVPU.sub.-- HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCY 5-48 VIRUS TYPE 1 (BH10 AND HXB3 ISOLATES) PENV.sub.-- HV1B1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (BH10 ISOLATE) PPOL.sub.-- HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 637-673 VIRUS TYPE 1 (BH10 ISOLATE) PPOL.sub.-- HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 632-673 VIRUS TYPE 1 (BH5 ISOLATE) PENV.sub.-- HV1B8 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 540-589 626-678 786-813 VIRUS TYPE 1 (BH8 ISOLATE) PVPU.sub.-- HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY 21-48 VIRUS TYPE 1 (BH8 ISOLATE) PENV.sub.-- HV1BN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 267-294 338-365 562-590 628-679 787-815 VIRUS TYPE 1 (BRAIN ISOLATE) PVPU.sub.-- HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY 22-49 VIRUS TYPE 1 (BRAIN ISOLATE) PENV.sub.-- HV1BR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 550-599 636-688 796-823 VIRUS TYPE 1 (BRU ISOLATE) PPOL.sub.-- HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 632-673 VIRUS TYPE 1 (BRU ISOLATE) PVPU.sub.-- HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCY 5-48 VIRUS TYPE 1 (BRU ISOLATE) PENV.sub.-- HV1C4 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 397-424 557-606 643-695 803-835 VIRUS TYPE 1 (CDC-451 ISOLATE) PVPU.sub.-- HV1C4 VPU PROTEIN HUMAN IMMUNODEFICIENCY 3-30 VIRUS TYPE 1 (CDC-451 ISOLATE) PENV.sub.-- HV1EL ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 255-296 386-413 543-591 628-680 VIRUS TYPE 1 (ELI ISOLATE) PNEV.sub.-- HV1EL NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY 81-119 VIRUS TYPE 1 (ELI ISOLATE) PPOL.sub.-- HVIEL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 624-660 VIRUS TYPE 1 (ELI ISOLATE) PVPU.sub.-- HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY 6-33 VIRUS TYPE 1 (ELI ISOLATE) PENV.sub.-- HV1H2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (HXB2 ISOLATE) PPOL.sub.-- HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245 620-661 921-951 VIRUS TYPE 1 (HXB2 ISOLATE) PVPU.sub.-- HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY 5-48 VIRUS TYPE 1 (HSB2 ISOLATE) PENV.sub.-- HV1H3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (HSB3 ISOLATE) PENV.sub.-- HV1J3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 350-377 556-605 642-694 802-829 VIRUS TYPE 1 (JH3 ISOLATE) PGAG.sub.-- HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 91-118 VIRUS TYPE 1 (JH3 ISOLATE) PVPU.sub.-- HV1J3 VPU PROTEIN HUMAN IMMUNODEFICIENCY 2-29 VIRUS TYPE 1 (JH3 ISOLATE) PENV.sub.-- HV1JR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 336-363 622-675 783-811 VIRUS TYPE 1 (JRCSF ISOLATE) PPOL.sub.-- HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 222-249 624-665 VIRUS TYPE 1 (JRCSF ISOLATE) PVPU.sub.-- HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCY 22-49 VIRUS TYPE 1 (JRCSF ISOLATE) PENV.sub.-- HV1MA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 547-595 633-707 794-826 VIRUS TYPE 1 (MAL ISOLATE) PPOL.sub.-- HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 476-510 619-660 VIRUS TYPE 1 (MAL ISOLATE) PVPU.sub.-- HV1MA VPU PROTEIN HUMAN IMMUNODEFICIENCY 5-32 VIRUS TYPE 1 (MAL ISOLATE) PENV.sub.-- HV1MF ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 543-592 629-681 789-816 VIRUS TYPE 1 (MFA ISOLATE) PENV.sub.-- HV1MN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 343-370 567-595 632-684 791-819 VIRUS TYPE 1 (MN ISOLATE) PGAG.sub.-- HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 87-118 VIRUS TYPE 1 (MN ISOLATE) PPOL.sub.-- HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 221-248 623-664 VIRUS TYPE 1 (MN ISOLATE) PENV.sub.-- HV1ND ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 249-290 536-583 621-673 783-813 VIRUS TYPE 1 (NDK ISOLATE) PNEF.sub.-- HV1ND NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY 81-119 VIRUS TYPE 1 (NDK ISOLATE) PPOL.sub.-- HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 624-660 VIRUS TYPE 1 (NDK ISOLATE) PVPU.sub.-- HV1ND VPU PROTEIN HUMAN IMMUNODEFICIENCY 6-33 VIRUS TYPE 1 (NDK ISOLATE) PENV.sub.-- HV1N5 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 326-360 VIRUS TYPE 1 (NEW YORK-5 ISOLATE PPOL.sub.-- HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245 625-661 VIRUS TYPE 1 (NEW YORK-5 ISOLATE PENV.sub.-- HV1OY ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 544-591 630-704 789-820 VIRUS TYPE 1 (OY1 ISOLATE) PPOL.sub.-- HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245 620-661 VIRUS TYPE 1 (OY1 ISOLATE) PENV.sub.-- HV1PV ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (PV22 ISOLATE) PPOL.sub.-- HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 637-673 VIRUS TYPE 1 (PV22 ISOLATE) PVPU.sub.-- HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY 5-48 VIRUS TYPE 1 (PV22 ISOLATE) PENV.sub.-- HV1RH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 280-307 351-378 554-602 640-692 800-832 VIRUS TYPE 1 (RF/HAT ISOLATE) PPOL.sub.-- HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 619-660 VIRUS TYPE 1 (RF/HAT ISOLATE) VIF.sub.-- HV1RH VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY 62-89 VIRUS TYPE 1 (RF/HAT ISOLATE) PENV.sub.-- HV1SC ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 338-365 545-593 631-683 VIRUS TYPE 1 (SC ISOLATE) PENV.sub.-- HV1S1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 333-363 536-585 622-674 782-809 VIRUS TYPE 1 (SF162 ISOLATE) PVPU.sub.-- HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCY 22-49 VIRUS TYPE 1 (SF162 ISOLATE) PENV.sub.-- HV1S3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 541-589 627-679 787-815 VIRUS TYPE 1 (SF33 ISOLATE) PENV.sub.-- HV1KB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 274-301 555-596 637-677 776-824 VIRUS TYPE 1 (STRAIN KB-1-GP32) PPOL.sub.-- HVIU4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 513-540 619-660 VIRUS TYPE 1 (STRAIN UGANDAN/ISOLATE U) PENV.sub.-- HV1W1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 338-365 545-593 631-683 791-818 VIRUS TYPE 1 (WMJ1 ISOLATE) PENV.sub.-- HV1W2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 334-361 536-584 622-674 782-809 VIRUS TYPE 1 (WMJ2 ISOLATE) PENV.sub.-- HV1Z8 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 266-307 573-601 634-678 797-828 VIRUS TYPE 1 (Z-84 ISOLATE) PENV.sub.-- HV1Z2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 255-296 542-591 628-680 790-820 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE) PPOL.sub.-- HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 619-660 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE) PENV.sub.-- HV1Z3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 251-292 VIRUS TYPE 1 (ZAIRE 3 ISOLATE) PENV.sub.-- HV1Z6 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 256-297 545-593 630-682 792-822 VIRUS TYPE 1 (ZAIRE 6 ISOLATE) PNEF.sub.-- HV1Z6 NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY 86-124 VIRUS TYPE 1 (ZAIRE 6 ISOLATE) PENV.sub.-- HZ1ZH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 627-666 791-823 VIRUS TYPE 1 (ZAIRE HZ321 ISOLATE) PENV.sub.-- HV2BE ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 61-88 532-591 621-648 653-697 VIRUS TYPE 2 (ISOLATE BEN) PGAG.sub.-- HV2BE GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 88-115 VIRUS TYPE 2 (ISOLATE BEN) PPOL.sub.-- HV2BE POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 491-582 VIRUS TYPE 2 (ISOLATE BEN) PENV.sub.-- HV2CA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 534-593 623-650 655-699 VIRUS TYPE 2 (ISOLATE CAM2) PPOL.sub.-- HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 471-562 VIRUS TYPE 2 (ISOLATE CAM2) PENV.sub.-- HV2D1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 61-88 523-550 555-582 644-688 VIRUS TYPE 2 (ISOLATE D194) PGAG.sub.-- HV2D1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 88-115 VIRUS TYPE 2 (ISOLATE D194) PPOL.sub.-- HV2D1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 509-600 VIRUS TYPE 2 (ISOLATE D194) PPOL.sub.-- HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 491-568 VIRUS TYPE 2 (ISOLATE D205,7) PENV.sub.-- HV2G1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 60-87 524-551 556-583 613-640 645-693 VIRUS TYPE 2 (ISOLATE GHANA-1) PPOL.sub.-- HV2G1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 471-562 VIRUS TYPE 2 (ISOLATE GHANA-1) PENV.sub.-- HV2NZ ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 61-88 524-551 556-583 613-640 662-689 VIRUS TYPE 2 (ISOLATE NIH-Z) PGAG.sub.-- HV2NZ GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 88-115 VIRUS TYPE 2 (ISOLATE NIH-Z) PPOL.sub.-- HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 471-529 VIRUS TYPE 2 (ISOLATE NIH-Z) PENV.sub.-- HV2RO ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 58-85 533-592 622-698 VIRUS TYPE 2 (ISOLATE ROD) PPOL.sub.-- HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 472-563 VIRUS TYPE 2 (ISOLATE ROD) PENV.sub.-- HV2SB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 557-584 614-673 VIRUS TYPE 2 (ISOLATE SBLISY) PPOL.sub.-- HV2SB POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 473-562 VIRUS TYPE 2 (ISOLATE SBLISY) PENV.sub.-- HV2ST ENV POLYPROTEIN 442-476 527-554 559-586 648-692 VIRUS TYPE 2 (ISOLATE ST) PGAG.sub.-- HV2ST GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 88-115 VIRUS TYPE 2 (ISOLATE ST) PPOL.sub.-- HV2ST POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 491-582 VIRUS TYPE 2 (ISOLATE ST) PENV.sub.-- HV2S2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 442-476 527-554 559-586 648-682 VIRUS TYPE 2 (ISOLATE ST/24 1C#2) PVE4.sub.-- HPV11 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 81-108 TYPE 11 PVE5A.sub.-- HPV11 PROBABLE E5A PROTEIN HUMAN PAPILLOMA VIRUS 30-60 TYPE 11 PVE2.sub.-- HPV13 E2 PROTEIN HUMAN PAPILLOMA VIRUS 157-184 334-361 TYPE 13 PVE2.sub.-- HPV16 E2 PROTEIN HUMAN PAPILLOMA VIRUS 61-105 312-342 TYPE 16 PVE4.sub.-- PPV16 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 66-93 TYPE 16 PVE1.sub.-- HPV18 E1 PROTEIN HUMAN PAPILLOMA VIRUS 60-87 TYPE 18 PVE2.sub.-- HPV18 E2 PROTEIN HUMAN PAPILLOMA VIRUS 313-340 TYPE 18 PVE4.sub.-- HPV18 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 59-86 TYPE 18 PVE6.sub.-- HPV18 E6 PROTEIN HUMAN PAPILLOMA VIRUS 75-102 TYPE 18 VL1.sub.-- HPV18 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 183-210 TYPE 18 PVE2.sub.-- HPV1A E2 PROTEIN HUMAN PAPILLOMA VIRUS 159-186 TYPE 1A VL2.sub.-- HPV1A PROBABLE L2 PROTEIN HUMAN PAPILLOMA VIRUS 407-445 TYPE 1A PVE1.sub.-- HPV2A E1 PROTEIN HUMAN PAPILLOMA VIRUS 21-48 TYPE 2A PVE2.sub.-- HPV2A E2 PROTEIN HUMAN PAPILLOMA VIRUS 159-193 TYPE 2A PVE4.sub.-- HPV31 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 75-102 TYPE 31 PVE6.sub.-- HPV31 E6 PROTEIN HUMAN PAPILLOMA VIRUS 69-96 TYPE 31 PVE1.sub.-- HPV33 E1 PROTEIN HUMAN PAPILLOMA VIRUS 180-207 TYPE 33 PVE2.sub.-- HPV33 E2 PROTEIN HUMAN PAPILLOMA VIRUS 304-331 TYPE 33 VL1.sub.-- HPV33 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 19-46 TYPE 33 PVE2.sub.-- HPV35 E2 PROTEIN HUMAN PAPILLOMA VIRUS 158-192 327-354 TYPE 35 PVE5.sub.-- HPV35 PROBABLE E5 PROTEIN HUMAN PAPILLOMA VIRUS 27-54 TYPE 35 PVE1.sub.-- HPV39 E1 PROTEIN HUMAN PAPILLOMA VIRUS 103-130 TYPE 39 PVE2.sub.-- HPV39 E2 PROTEIN HUMAN PAPILLOMA VIRUS 7-34 323-357 TYPE 39 PVE6.sub.-- HPV39 E6 PROTEIN HUMAN PAPILLOMA VIRUS 71-102 TYPE 39 PVE1.sub.-- HPV41 E1 PROTEIN HUMAN PAPILLOMA VIRUS 55-89 TYPE 41 PVE4.sub.-- HPV41 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 63-97 TYPE 41 PVE6.sub.-- HPV41 E6 PROTEIN HUMAN PAPILLOMA VIRUS 119-146 TYPE 41 VL1.sub.-- HPV41 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 345-372 TYPE 41 VL2.sub.-- HPV41 PROBABLE L2 PROTEIN HUMAN PAPILLOMA VIRUS 415-442 TYPE 41 PVE1.sub.-- HPV42 E1 PROTEIN HUMAN PAPILLOMA VIRUS 25-59 TYPE 42 PVE6.sub.-- HPV45 E6 PROTEIN HUMAN PAPILLOMA VIRUS 75-102 TYPE 45 PVE1.sub.-- HPV47 E1 PROTEIN HUMAN PAPILLOMA VIRUS 146-173 TYPE 47 PVE2.sub.-- HPV47 E2 PROTEIN HUMAN PAPILLOMA VIRUS 17-51 148-175 276-303 TYPE 47 PVE2.sub.-- HPV05 PROBABLE E2 PROTEIN HUMAN PAPILLOMA VIRUS 17-51 TYPE 5 PVE4.sub.-- HPV05 PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 202-229 TYPE 5 PVE2.sub.-- HPV51 E2 PROTEIN HUMAN PAPILLOMA VIRUS 137-284 TYPE 51 PVE6.sub.-- HPV51 E6 PROTEIN HUMAN PAPILLOMA VIRUS 72-99 TYPE 51 VL1.sub.-- HPV51 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 19-46 TYPE 51 PVE1.sub.-- HPV57 E1 PROTEIN HUMAN PAPILLOMA VIRUS 21-48 TYPE 57 PVE2.sub.-- HPV57 E2 PROTEIN HUMAN PAPILLOMA VIRUS 166-193 TYPE 57 PVE2.sub.-- HPV58 E2 PROTEIN HUMAN PAPILLOMA VIRUS 2-36 309-336 TYPE 58 VL1.sub.-- HPV58 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 45-72 TYPE 58 PVE2.sub.-- HPV5B PROBABLE E2 PROTEIN HUMAN PAPILLOMA VIRUS 17-51 TYPE 5B PVE4.sub.-- HPV5B PROBABLE E4 PROTEIN HUMAN PAPILLOMA VIRUS 202-229 TYPE 5B PVE5.sub.-- HPV5B PROBABLE E5 PROTEIN HUMAN PAPILLOMA VIRUS 11-41 TYPE 5B PVE5A.sub.-- HPV6B PROBABLE E5A PROTEIN HUMAN PAPILLOMA VIRUS 30-60 TYPE 6B PVE5A.sub.-- HPV6C PROBABLE E5A PROTEIN HUMAN PAPILLOMA VIRUS 30-60 TYPE 6C VL1.sub.-- HPV08 PROBABLE L1 PROTEIN HUMAN PAPILLOMA VIRUS 354-392 TYPE 8 PVE6.sub.-- HPVME E6 PROTEIN HUMAN PAPILLOMA VIRUS 71-102 TYPE ME180 PRRPP.sub.-- PI1HB RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 84-111 234-261 375-416 SUBUNIT VIRUS (STRAIN C35) PNCAP.sub.-- PI1HC NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 377-404 455-482 VIRUS (STRAIN C39) PRRPP.sub.-- PI1HC RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 84-111 234-261 375-416 VIRUS (STRAIN C39) PVGLF.sub.-- PI1HC FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1 147-174 210-266 PRECURSOR VIRUS (STRAIN C39) PRRPP.sub.-- PI1HE RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 94-111 244-271 375-416 SUBUNIT VIRUS (STRAIN CI-14/83) PVNSC.sub.-- PI1HE NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 41-75 VIRUS (STRAIN CI-14/83) PRRPP.sub.-- PI1HD RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1 84-111 232-262 375-416 SUBUNIT VIRUS (STRAIN CI-5/73) PHEMA.sub.-- PI1HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 1 79-110 366-393 NEURAMINIDASE VIRUS (STRAIN WASHINGTON/ 1957) PNCAP.sub.-- PI1HW NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 377-404 444-488 VIRUS (STRAIN WASHINGTON/ 1957) PRRPP.sub.-- PI2H RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 167-194 222-256 SUBUNIT VIRUS PVGLF.sub.-- PI2H FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 90-117 141-175 238-266 483-528 PRECURSOR VIRUS PVGLF.sub.-- PI2HG FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 90-117 114-175 238-266 483-528 PRECURSOR VIRUS (STRAIN GREER) PRRPL.sub.-- P12HT RNA POLYMERASE BETA HUMAN PARAINFLUENZA 2 322-349 1564-1598 1687-1721 1901-1946 SUBUNIT VIRUS (STRAIN TOSHIBA) PRRPP.sub.-- PI2HT RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 167-194 222-256 SUBUNIT VIRUS (STRAIN TOSHIBA) PVGLF.sub.-- PI2HT FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 90-117 141-175 238-266 483-528 PRECURSOR VIRUS (STRAIN TOSHIBA) PVMAT.sub.-- PI2HT MATRIX PROTEIN HUMAN PARAINFLUENZA 2 96-123 VIRUS (STRAIN TOSHIBA) PHEMA.sub.-- PI3HA HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDAS E VIRUS (STRAIN AUS/124854/74 PNCAP.sub.-- PI3H4 NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 3 376-403 VIRUS (STRAIN NIH 47885) PHEMA.sub.-- PI3H4 HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDAS E VIRUS (STRAIN NIH 47885) PRRPL.sub.-- PI3H4 RNA POLYMERASE BETA HUMAN PARAINFLUENZA 3 52-86 136-163 608-638 1081-1123 1994-2036 2115-2142 SUBUNIT VIRUS (STRAIN NIH 47885) PRRRP.sub.-- PI3H4 RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 3 114-144 269-299 SUBUNIT VIRUS (STRAIN NIH 47885) PVGLF.sub.-- PI3H4 FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 3 115-182 207-241 457-497 PRECURSOR VIRUS (STRAIN NIH 47885) PVMAT.sub.-- PI3HR MATRIX PROTEIN HUMAN PARAINFLUENZA 3 201-231 VIRUS (STRAIN NIH 47885) PVNSC.sub.-- PI3H4 NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 3 58-99 VIRUS (STRAIN NIH 47885) PHEMA.sub.-- PI3HV HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDAS E VIRUS (STRAIN TEX/12677/83) PHEMA.sub.-- PI3HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-76 NEURAMINIDAS E VIRUS (STRAIN TEX/545/80) PHEMA.sub.-- PI3HU HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 23-70 NEURAMINIDAS E VIRUS (STRAIN TEX/9305/82) PHEMA.sub.-- PI3HX HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDAS E VIRUS (STRAIN WASH/1511/73) PHEMA.sub.-- PI3HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDAS E VIRUS (STRAIN WASH/641/79) PRRPP.sub.-- PI4HA RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4A 4-38 SUBUNIT VIRUS (STRAIN TOSHIBA) PVV.sub.-- PI4HA V PROTEIN HUMAN PARAINFLUENZA 4A 4-38 VIRUS (STRAIN TOSHIBA) PRRPP.sub.-- HRSV RNA POLYMERASE ALPHA HUMAN RESPIRATORY 99-141 SUBUNIT SYNCYTIAL VIRUS PNCAP.sub.-- HRSVA NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY 4-31 SYNCYTIAL VIRUS (STRAIN A2) PRRPL.sub.-- HRSVA RNA POLYMERASE BETA HUMAN RESPIRATORY 103-192 210-237 667-694 788-815 1007-1034 1138-1165 1453-1480 1776-1803 2062-2089 SUBUNIT SYNCYTIAL VIRUS 9STRAIN A2) PRRPP.sub.-- HRSVA RNA POLYMERASE ALPHA HUMAN RESPIRATORY 99-141 SUBUNIT SYNCYTIAL VIRUS (STRAIN A2) PVGLF.sub.-- HRSVA FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-202 213-243 488-518 PRECURSOR SYNCYTIAL VIRUS (STRAIN A2) PVMA2.sub.-- HRSVA MATRIX GLYCOPROTEIN M2 HUMAN RESPIRATORY 124-151 SYNCYTIAL VIRUS (STRAIN A2) PVMAT.sub.-- HRSVA MATRIX PROTEIN HUMAN RESPIRATORY 219-246 SYNCYTIAL VIRUS (STRAIN A2) PVGLG.sub.-- HRSV4 MAJOR SURFACE HUMAN RESPIRATORY 66-107 GLYCOPROTEIN G SYNCYTIAL VIRUS (STRAIN RSB5857) PVGLG.sub.-- HRSV5 MAJOR SURFACE HUMAN RESPIRATORY 243-273 GLYCOPROTEIN G SYNCYTIAL VIRUS (STRAIN RSB6190) PVGLF.sub.-- HRSVR FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-202 213-243 442-471 488-518 PRECURSOR VIRUS (STRAIN RSS-2) PRRPP.sub.-- HRSVL RNA POLYMERASE ALPHA HUMAN RESPIRATORY 99-141 SUBUNIT SYNCYTIAL VIRUS (SUBGROUP A/STRAIN LONG) PVGLF.sub.-- HRSVL FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-202 216-243 444-471 488-515 PRECURSOR SYNYTIAL VIRUS (SUBGROUP A/STRAIN LONG) PNCAP.sub.-- HRSV1 NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY 4-31 74-108 112-141 SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PRRPP.sub.-- HRSV1 RNA POLYMERASE ALPHA HUMAN RESPIRATORY 99-141 SUBUNIT SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PVGLF.sub.-- HRSV1 FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-203 442-471 488-515 PRECURSOR SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PVGLG.sub.-- HRSV1 MAJOR SURFACE HUMAN RESPIRATORY 63-93 GLYCOPROTEIN G SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PVGLG.sub.-- HRSV8 MAJOR SURFACE HUMAN RESPIRATORY 66-93 GLYCOPROTEIN G SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 8/60) PENV.sub.-- HTL1C ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA 342-376 VIRUS TYPE 1 (CARIBBEAN ISOLATE) PPOL.sub.-- HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEIMA 674-712 VIRUS TYPE I (CARIBBEAN ISOLATE) PENV.sub.-- HTLIM ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA 342-376 VIRUS TYPE 1 (ISOLATE MT-2) PENV.sub.-- HTL1A ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA 342-376 VIRUS TYPE 1 (STRAIN ATK) PPOL.sub.-- HTL1A POL POLYPROTEIN HUMAN T-CELL LEUKEMIA 674-712 VIRUS TYPE 1 (STRAIN ATK) PENV.sub.-- HTLV2 ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA 336-370 VIRUS TYPE II PDPOL.sub.-- HSVI1 DNA POLYMERASE ICTALURID HERPES VIRUS 1 328-366 710-737 PKR74.sub.-- HSVI1 GENE 74 PROTEIN KINASE ICTALURID HERPES VIRUS 1 491-518 PVG07.sub.-- HSVI1 HYPOTH GENE 7 MEMB PRO ICTALURID HERPES VIRUS 1 71-98 PVG17.sub.-- HSVI1 HYPOTHETICAL GENE 17 ICTALURID HERPES VIRUS 1 177-204 PROTEIN PVG18.sub.-- HSVI1 HYPOTHETICAL GENE 18 ICTALURID HERPES VIRUS 1 174-208 PROTEIN PVG22.sub.-- HSVI1 HYPOTHETICAL GENE 22 ICTALURID HERPES VIRUS 1 373-400 581-622 668-705 766-824 PROTEIN PVG24.sub.-- HSVI1 HYPOTHETICAL GENE 24 ICTALURID HERPES VIRUS 1 31-58 PROTEIN PVG28.sub.-- HSVI1 HYPOTHETICAL GENE 28 ICTALURID HERPES VIRUS 1 253-290 497-528 PROTEIN PVG34.sub.-- HSVI1 HYPOTHETICAL GENE 34 ICTALURID HERPES VIRUS 1 95-122 PROTEIN PVG37.sub.-- HSVI1 HYPOTHETICAL GENE 37 ICTALURID HERPES VIRUS 1 442-469 PROTEIN PVG39.sub.-- HSVI1 HYPOTHETICAL GENE 39 ICTALURID HERPES VIRUS 1 651-678 1088-1115 PROTEIN PVG46.sub.-- HSVI1 PROBABLE MAJOR ICTALURID HERPES VIRUS 1 142-169 897-924 973-1007 GLYCOPROTEIN PVG51.sub.-- HSVI1 HYPOTH GENE 51 ICTALURID HERPES VIRUS 1 34-61 87-114 MEMBRANE PROTEIN PVG56.sub.-- HSVI1 HYPOTHETICAL GENE 56 ICTALURID HERPES VIRUS 1 582-609 PROTEIN PVG63.sub.-- HSVI1 HYPOTHETICAL GENE 63 ICTALURID HERPES VIRUS 1 550-584 PROTEIN PVG64.sub.-- HSVI1 HYPOTHETICAL GENE 64 ICTALURID HERPES VIRUS 1 477-504 PROTEIN PVG65.sub.-- HSVI1 HYPOTHETICAL GENE 65 ICTALURID HERPES VIRUS 1 1213-1254 PROTEIN PVG66.sub.-- HSVI1 HYPOTHETICAL GENE 66 ICTALURID HERPES VIRUS 1 362-406 PROTEIN PVG67.sub.-- HSVI1 HYPOTHETICAL GENE 67 ICTALURID HERPES VIRUS 1 1342-1369 PROTEIN PVG68.sub.-- HSVI1 HYPOTHETICAL GENE 68 ICTALURID HERPES VIRUS 1 261-288 PROTEIN PVG72.sub.-- HSVI1 HYPOTHETICAL GENE 72 ICTALURID HERPES VIRUS 1 447-481 PROTEIN PVG75.sub.-- HSVI1 HYPOTHETICAL GENE 75 ICTALURID HERPES VIRUS 1 388-422 PROTEIN PVG76.sub.-- HSVI1 HYPOTHETICAL GENE 76 ICTALURID HERPES VIRUS 1 200-227 PROTEIN PVTER.sub.-- HSVI1 PROBABLE DNA ICTALURID HERPES VIRUS 1 710-737 PACKAGING PROTEIN PHEMA.sub.-- IAHSW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/SWITZERLAND/137/72 PHEMA.sub.-- IAAIC HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 AICHI/2/68) PVNS1.sub.-- IAALA NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 ALASKA/6/7) PVNUC.sub.-- IAANA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 ANA ACUTA/PRIMORJE/695/76) PRRP2.sub.-- IAANN RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 ANN ARBOR/6/60) PVNS1.sub.-- IAANN NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 ANN ARBOR/6/60) PVNUC.sub.-- IAANN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 ANN ARBOR/6/60) PHEMA.sub.-- IABAN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 24-51 371-437 BANGKOK/1/79) 24-51 371-437 PNRAM.sub.-- IABDA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 47-81 BLACK DUCK/AUSTRALIA/ 702/78) PVNUC.sub.-- IABRA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 BRAZIL/11/78) PHEMA.sub.-- IABUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 BUDGERIGAR/HOKKAIDO/1/77) PRRP3.sub.-- IABUD RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 537-567 SUB P3 BUDGERIGAR/HOKKAIDO/1/77) PVNUC.sub.-- IABUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 BUDGERIGAR/HOKKAIDO/1/77) PVNUC.sub.-- IACAL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 CALIFORNIA/10/78) PNRAM.sub.-- IACAO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 33-64 CAMEL/MONGOLIA/82 PHEMA.sub.-- IACAO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN A/ 9-36 CAMEL/MONGOLIA/82) PHEMA.sub.-- IACKA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 CHICKEN/ALABAMA/1/75) PHEMA.sub.-- IACKG HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 31-58 382-441 494-528 CHICKEN/GERMANY/N/49 PVNS1.sub.-- IACKG NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 CHICKEN/GERMANY/N/49 PVNUC.sub.-- IACKG NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 CHICKEN/GERMANY/N/49) PVNS1.sub.-- IACKJ NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 168-195 NS1 CHICKEN/JAPAN/24) PHEMA.sub.-- IACKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 396-426 CHICKEN/PENNSYLVANIA/1/83) PVNUC.sub.-- IACKP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 CHICKEN/PENNSYLVANIA/1/83) PHEMA.sub.-- IACKQ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 396-426 CHICKEN/PENNSYLVANIA/1370/ 83) PHEMA.sub.-- IACKV HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 119-146 384-443 CHICKEN/VICTORIA/1/85) PNRAM.sub.-- IACHI NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 50-91 CHILE/1/83) PRRP3.sub.-- IACHI RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 331-358 SUB P3 CHILE/1/83) PVNS1.sub.-- IACHI NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 CHILE/1/83) PHEMA.sub.-- IADA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 DUCK/ALBERTA/28/76) PNRAM.sub.-- IADA1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 51-81 DUCK/ALBERTA/28/76) PHEMA.sub.-- IADA4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 418-478 DUCK/ALBERTA/35/76) PHEMA.sub.-- IADA2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 423-453 499-543 DUCK/ALBERTA/60/76) PVNS1.sub.-- IADA2 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 DUCK/ALBERTA/60/76) PHEMA.sub.-- IADA3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 398-453 DUCK/ALBERTA/78/76) PVNUC.sub.-- IADAU NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/AUSTRALIA/749/80) PVNUC.sub.-- IADBE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/BEIJING/1/78) PHEMA.sub.-- IADCZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 DUCK/CZECHOSLOVAKIA/56) PVNUC.sub.-- IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/CZECHOSLOVAKIA/56) PVNUC.sub.-- IADE1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/ENGLAND/1/) PHEMA.sub.-- IADE1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 402-453 506-533 DUCK/ENGLAND/1/56) PVNUC.sub.-- IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/ENGLAND/1/62) PNRAM.sub.-- IADGHE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 21-48 DUCK/GERMANY/49) PHEMA.sub.-- IADH7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/10/85) PHEMA.sub.-- IADH5 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/21/82) PHEMA.sub.-- IADH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/33/80) PHEMA.sub.-- IADH1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/5/77) PHEMA.sub.-- IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/7/82) PHEMA.sub.-- IADH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/8/80) PRRP2.sub.-- IADH2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 DUCK/HOKKAIDO/8/80) PHEMA.sub.-- IADH6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/9/85) PVNUC.sub.-- IADHK NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/HONG KONG/7/75) PHEMA.sub.-- IADIR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 413-445 DUCK/IRELAND/113/83) PHEMA.sub.-- IADMA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 31-58 DUCK/MANITOBA/1/53) PVNUC.sub.-- IADMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/MANITOBA/1/53) PHEMA.sub.-- IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-56 DUCK/MEMPHIS/546/76) PHEMA/IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 DUCK/MEMPHIS/928/74) PVNUC.sub.-- IADM2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/MEMPHIS/928/74) PHEMA.sub.-- IADNY HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21/14 55 DUCK/NEW YORK/12/78) PHEMA.sub.-- IADNZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 DUCK/NEW ZEALAND/31/76) PVNUC.sub.-- IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/NEW ZEALAND/31/76) PHEMA.sub.-- IADU1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 DUCK/UKRAINE/1/60) PHEMA.sub.-- IADU3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 DUCK/UKRAINE/1/63) PVNUC.sub.-- IADU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/UKRAINE/2/60) PVNUC.sub.-- IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 ENGLAND/19/55) PHEMA.sub.-- IAEN7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67 387-453 ENGLAND/321/77) PHEMA.sub.-- IAEN6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 24-51 ENGLAND/878/69) PHEMA.sub.-- IAHAL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/ALGIERS/72) PHEMA.sub.-- IAHCD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/C.DETROIT/1/64) PHEMA.sub.-- IAHC6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/CAMBRIDGE/1/63) PHEMA.sub.-- IAHC7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/CAMBRIDGE/1/73) PNRAM.sub.-- IAHCO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 197-224 386-413 EQUINE/COR/16/74) PHEMA.sub.-- IAHDE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/DETROIT/1/64) PHEMA.sub.-- IAHFO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/FONTAINEBLEAU/76) PVNUC/IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 EQUINE/JILLIN/1/89) PNRAM.sub.-- IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 5-44 46-76 364-400 EQUINE/KENTUCKY/1/81) PHEMA.sub.-- IAHK7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/KENTUCKY/1/87) PHEMA.sub.-- IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/KENTUCKY/2/86) PHEMA.sub.-- IAHLE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/LEXINGTON/1/66) PHEMA.sub.-- IAHLO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/LONDON/1416/73) PRRP2.sub.-- IAHLO RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 EQUINE/LONDON/1416/73) PVNUC.sub.-- IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 LONDON/1416/73) PHEMA.sub.-- IAHMI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/MIAMI/1/63) PVNUC.sub.-- IAHMI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 EQUINE/MIAMI/1/63) PHEMA.sub.-- IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/NEW MARKET/1/77) PHEMA.sub.-- IAHNM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/NEW MARKET/76) PHEMA.sub.-- IAHPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/PRAGUE/1/56) PRRP3.sub.-- IAHPR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 331-361 480-507 SUB P3 EQUINE/PRAGUE/1/56) PVNUC.sub.-- IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 EQUINE/PRAGUE/1/56) PHEMA.sub.-- IAHRO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/ROMANIA/80) PHEMA.sub.-- IAHSA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/SANTIAGO/1/85) PHEMA.sub.-- IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/SAO PAULO/1/76) PHEMA.sub.-- IAHTE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/TENNESSEE/5/86) PRRP2.sub.-- IAHTE RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 EQUINE/TENNESSEE/5/86) PVNUC.sub.-- IAHTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 EQUINE/TENNESSEE/5/86) PHEMA.sub.-- IAHTO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-455 EQUINE/TOKYO/71) PHEMA.sub.--PL IAHUR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/URUGUAY/1/63) PVNS1.sub.-- IAFOM NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 FORT MONMOUTH/1/47) PVNUC.sub.-- IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FORT MONMOUTH/1/47) PVNS1.sub.-- IAFOW NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 FORT WARREN/1/50) PVNUC.sub.-- IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FORT WARREN/1/50) PVNUC.sub.-- IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FOWL PLAGUE VIRUS/DOBSON/ `DUTCH`/27) PHEMA.sub.-- IAFPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 177-221 384-442 FOWL PLAGUE VIRUS/ ROSTOCK/34) PRRP2.sub.-- IAFPR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 FOWL PLAGUE VIRUS/ ROSTOCK/34) PVNUC.sub.-- IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FOWL PLAGUE VIRUS/ ROSTOCK/34) PNRAM.sub.-- IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 10-48 52-80 197-224 FOWL PLAGUE VIRUS/ WEYBRIDGE) PHEMA.sub.-- IAGRE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 GREY TEAL/AUSTRALIA/2/79) PVNUC.sub.-- IAURE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GREY TEAL/AUSTRALIA/2/79) PHEMA.sub.-- IAGUA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 504-531 GULL/ASTRAKHAN/227/84) PVNUC.sub.-- IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 389-405 GULL/ASTRAKHAN/227/84) PVNUC.sub.-- IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/1815/79) PVNUC.sub.-- IAGU3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/1824/78) PVNUC.sub.-- IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 379-405 GULL/MARYLAND/5/77) PHEMA.sub.-- IAGU2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 505-532 GULL/MARYLAND/704/77) PRRP2.sub.-- IAGU2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 GULL/MARYLAND/704/77) PVNUC.sub.-- IAGU2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/704/77) PVNUC.sub.-- IAGUM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MASSACHUSETTS/26/80) PVNUC.sub.-- IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MINNESOTA/945/80) PHEMA.sub.-- IAHAR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 HARBIN/1/88) PVNUC.sub.-- IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 HICKOX/40) PVNUC.sub.-- IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 HONG KONG/1/68) PVNUC.sub.-- IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 HONG KONG/5/83) PHEMA.sub.-- IAJAP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 196-223 JAPAN/305/57) PHEMA.sub.-- IAKIE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 425-478 KIEV/59/79) PNRAM.sub.-- IAKIE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-81 KIEV/59/79) PVNUC.sub.-- IAKIE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 KIEV/59/79) PRRP1.sub.-- IAKOR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 575-602 SUB P1 KOREA/426/68) PRRP2.sub.-- IAKOR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 KOREA/426/68) PRRP2.sub.-- IALE2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 LENINGRAD/134/17/57) PRRP2.sub.-- IALE1 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 LENINGRAD/134/57) PVNS1.sub.-- IALE1 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 LENINGRAD/134/57) PHEMA.sub.-- IALEN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 425-478 LENINGRAD/54/1) PNRAM.sub.-- IALEN NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-81 LENINGRAD/54/1) PVNUC.sub.-- IALEN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 LENINGRAD/54/1) PVNS1.sub.-- IAMA6 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 MALLARD/ALBERTA/88/76) PHEMA.sub.-- IAMAA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 380-450 MALLARD/ASTRAKHAN/244/82) PVNUC.sub.-- IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 MALLARD/ASTRAKHAN/244/82) PHEMA.sub.-- IAMAB HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 385-455 MALLARD/ASTRAKHAN/263/82) PRRP2.sub.-- IAMAN RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 MALLARD/NEW YORK/6750/78) PVNUC.sub.-- IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 MALLARD/NEW YORK/6750/78) PHEMA.sub.-- IAMAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 MALLARD/NEW YORK/6874/78) PHEMA.sub.-- IAME1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67 387-453 MEMPHIS/1/71) PNRMA.sub.-- IAME1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 50-81 MEMPHIS/1/71H-A/BELLAMY/ 42N) PHEMA.sub.-- IAME2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67 387-453 MEMPHIS/102/72) PHEMA.sub.-- IAME6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 24-51 371-437 MEMPHIS/6/86) PHEMA.sub.-- IAMIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 31-58 382-441 MINK/SWEDEN/84) PVNUC.sub.-- IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 MINK/SWEDEN/84) PVNUC.sub.-- IANEJ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 NEW JERSEY/8/76) PHEMA.sub.-- IANT6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 NT/60/68) PRRP2.sub.-- IANT6 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 NT/60/68) PVNUC.sub.-- IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 NT/60/68) PVNUC.sub.-- IAOHI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 OHIO/4/83) PNRAM.sub.-- IAPAR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 50-81 PARROT/ULSTER/73) PVNUC.sub.-- IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 PARROT/ULSTER/73) PHEMA.sub.-- IAPIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 505-534 PILOT WHALE/MAINE/328/84 PRRP2.sub.-- IAP10 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 PINTAIL/ALBERTA/119/79) PVNS1.sub.-- IAPI1 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 PINTAIL/ALBERTA/121/79) PVNS1.sub.-- IAPI3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 PINTAIL/ALBERTA/358/79) PHEMA.sub.-- IAPUE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 425-478 PUERTO RICO/8/34) PNRAM.sub.-- IAPUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 PUERTO RICO/8/34) PRRP2.sub.-- IAPUE RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 PUERTO RICO/8/34) PVNUC.sub.-- IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 PUERTO RICO/8/34) PHEMA.sub.-- IAQU7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 24-51 QU/7/70) PHEMA.sub.-- IARUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 RUDDY TURNSTONE/NEW JERSEY/47/85) PRRP2.sub.-- IARUD RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 RUDDY TURNSTONE/NEW JERSEY/47/85) PVNUC.sub.-- IARUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 RUDDY TURNSTONE/NEW JERSEY/47/85) PNRAM.sub.-- IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-88 RUDDY TURNSTONE/NEW JERSEY/60/85) PVNUC.sub.-- IASE0 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SEAL/MASSACHUSETTS/1/80) PHEMA.sub.-- IASE2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 SEAL/MASSACHUSETTS/133/82) PHEMA.sub.-- IASH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 28-56 160-187 506-547 SHEARWATER/AUSTRALIA/72) PVNUC.sub.-- IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SHEARWATER/AUSTRALIA/72) PRRP2.sub.-- IASIN RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SINGAPORE/1/57) PVNUC.sub.-- IASIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378/405 SINGAPORE/1/57) PHEMA.sub.-- IASTA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 119-146 384-443 STARLING/VICTORIA/5156/85) PVNUC.sub.-- IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/29/37) PVNUC.sub.-- IAZ41 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/41/49) PVNUC.sub.-- IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/CAMBRIDGE/1/35) PHEMA.sub.-- IAZCO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-68 398-453 SWINE/COLORADO/1/77) PVNUC.sub.-- IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/DANDONG/9/83) PVNUC.sub.-- IAZGE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/GERMANY/2/81) PHEMA.sub.-- IAZH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 SWINE/HONG KONG/126/82) PRRP2.sub.-- IAZH3 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SWINE/HONG KONG/126/82) PVNUC.sub.-- IAZH3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/HONG KONG/126/82) PVNUC.sub.-- IAZH4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/HONG KONG/127/82) PVNUC.sub.-- IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/HONG KONG/6/76) PHEMA.sub.-- IAZH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 SWINE/HONG KONG/81/78) PRRP2.sub.-- IAZH2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SWINE/HONG KONG/81/78) PHEMA.sub.-- IAZIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 418-478 506-547 SWINE/INDIANA/1726/88) PRRP2.sub.-- IAZI1 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SWINE/IOWA/15/30) PVNUC.sub.-- IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/IOWA/15/30) PVNUC.sub.-- IAZI2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/IOWA/1976/31) PVNUC.sub.-- IAZI3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/IOWA/46) PVNUC.sub.-- IAZJ3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ITALY/141/81) PVNUC.sub.-- IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ITALY/2/79) PVNUC.sub.-- IAZJ1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ITALY/437/76) PVNUC.sub.-- IAZJ4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ITALY/839/89) PVNUC.sub.-- IAZJA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/JAMESBURG/42) PVNUC.sub.-- IAZMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/MAY/54) PVNUC.sub.-- IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/NETHERLANDS/12/85) PHEMA.sub.-- IAZNJ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 418-478 506-547 SWINE/NEW JERSEY/11/76) PVNUC.sub.-- IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/OHIO/23/35) PVNUC.sub.-- IAZON NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ONTARIO/2/81) PRRP3.sub.-- IAZTE RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 487-514 SUB P3 SWINE/TENNESSEE/24/77) PVNUC.sub.-- IAZTE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WINE/TENNESSEE/24/77) PRRP2.sub.-- IAZTF RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 SWINE/TENNESSEE/26/77) PHEMA.sub.-- IAZUK HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 SWINE/UKKEL/1/84) PVNUC.sub.-- IAZW1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/WISCONSIN/1/57) PVNUC.sub.-- IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/WISCONSIN/1/61) PHEMA.sub.-- IATAI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 25-56 TAIWAN/1/86) PVNUC.sub.-- IATEI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TEAL/ICELAND/29/80) PHEMA.sub.-- IATRA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 TERN/AUSTRALIA/G70C/75) PNRAM.sub.-- IATRA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-82 TERN/AUSTRALIA/G70C/75) PVNUC.sub.-- IATRS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TERN/SOUTH AFRICA/61) PVNS1.sub.-- IATRT NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 TERN/TURKMENIA/18/72) PVNUC.sub.-- IATRT NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TERN/TURKMENIA/18/72) PVNUC.sub.-- IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TEXAS/1/77) PVNS1.sub.-- IATKB NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 TURKEY/BETHLEHEM/GLILIT/ 1492-B/82) PVNS1.sub.-- IATKC NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 TURKEY/CANADA/63) PHEMA.sub.-- IATKI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 415-445 TURKEY/IRELAND/1378/83) PVNUC.sub.-- IATKN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TURKEY/MINNESOTA/1661/81) PHEMA.sub.-- IATKM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 TURKEY/MINNESOTA/833/80) PRRP2.sub.-- IATKM RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 TURKEY/MINNESOTA/833/80) PHEMA.sub.-- IATKP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 424-454 493-539 TURKEY/ONTARIO/6118/68) PHEMA.sub.-- IATKO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 507-534 TURKEY/ONTARIO/7732/66) PVNUC.sub.-- IATKO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 TURKEY/ONTARIO/7732/66) PHEMA.sub.-- IATKR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 32-62 194-221 381-422 TURKEY/OREGON/71) PVNS2.sub.-- IATKR NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 87-114 NS2 TURKEY/OREGON/71) PHEMA.sub.-- IATKW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 419-449 500-536 TURKEY/WISCONSIN/1/66) PHEMA.sub.-- IAUDO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67 387-453 UDORN/307/72) PVNS1.sub.-- IAUDO NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 UDORN/307/72) PVNUC.sub.-- IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 UDORN/307/72) PHEMA.sub.-- IAUSS HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 425-478 USSR/90/77) PNRAM.sub.-- IAUSS NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-81 A/USSR/90/77) PVNS1.sub.-- IAUSS NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-98 NS1 USSR/90/77) PVNUC.sub.-- IAUSS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 USSR/90/77) PHEMA.sub.-- IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 41-68 388-454 VICTORIA/3/75) PRRP2.sub.-- IAVI7 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 327-354 SUB P2 VICTORIA/3/75) PVNUC.sub.-- IAVI6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 VICTORIA/5/68) PNRAM.sub.-- IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-88 WHALE/MAINE/1/84) PVNUC.sub.-- IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WHALE/MAINE/328/84) PVNUC.sub.-- IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WHALE/PACIFIC OCEAN/19/76) PHEMA.sub.-- IAWIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 424-477 WILSON-SMITH/33) PNRAM.sub.-- IAWIL NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 WILSON-SMITH/33) PRRP2.sub.-- IAWIL RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 WILSON-SMITH/33) PVNUC.sub.-- IAWIL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WILSON-SMITH/33) PVNUC.sub.-- IAWIS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WISCONSIN/3523/88) PHEMA.sub.-- IAXIA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 XIANFENG/3/89) PPRP2.sub.-- INBAC RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 157-194 SUB P2 ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP3.sub.-- INBAC RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 2-33 472-509 SUB P3 ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP2.sub.-- INBAD RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 164-194 SUB P2 ANN ARBOR/1/66 [WILD-TYPE] PRRP3.sub.-- INBAD RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 2-33 472-509 SUB P3 ANN ARBOR/1/66 [WILD-TYPE] PHEMA.sub.-- INBBE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 400-431 439-483 BEIJING/1/87) PHEMA.sub.-- INBBO HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 390-421 429-473 BONN/43) PHEMA.sub.-- INBEN HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 398-429 437-481 ENGLAND/222/82) PHEMA.sub.-- INBHK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 391-418 429-473 HONG KONG/8/73) PHEMA.sub.-- INBLE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 399-430 438-482 LEE/40) PNRAM.sub.-- INBLE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 4-35 LEE/40) PVNS2.sub.-- INBLE NONSTRUCTURAL PROTEIN INFLUENZA B VIRUS (STRAIN B/ 51-78 NS2 LEE/40) PHEMA.sub.-- INBMD HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 389-420 428-472 MARYLAND/59) PHEMA.sub.-- INBME HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 393-424 432-476 MEMPHIS/6/86) PHGEMA.sub.-- INBOR HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 398-429 437-481 OREGON/5/80) PVNS1.sub.-- INBPA NONSTRUCTURAL PROTEIN INFLUENZA B VIRUS (STRAIN B/ 171-198 NS1 PA/79) PHEMA.sub.-- INBSI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 398-429 437-481 SINGAPORE/222/79) PRRP2.sub.-- INBSI RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 157-194 SUB P2 SINGAPORE/222/79) PHEMA.sub.-- INBUS HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 391-422 430-474 USSR/100/83) PHEMA.sub.-- INBVK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 400-431 439-483 VICTORIA/2/87) PHEMA.sub.-- INBVI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 393-4224 432-476 VICTORIA/3/85) PVNS2.sub.-- INBYA NONSTRUCTURAL PROTEIN INFLUENZA B VIRUS (STRAIN B/ 51-78 NS2 YAMAGATA/1/73) PRRP3.sub.-- INCBE RNA-DIRECTED RNA POL INFLUENZA C VIRUS (STRAIN C/ 509-536 SUB P3 BERLIN/1/85) PHEMA.sub.-- INCCA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 495-571 CALIFORNIA/78) PVNUC.sub.-- INCAA NUCLEOPROTEIN INFLUENZA C VIRUS (STRAIN C/ 99-126 416-443 451-478 CALIFORNIA/78) PHEMA.sub.-- INCEN HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 ENGLAND/892/83) PHEMA.sub.-- INCGL HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 GREAT LAKES/1167/54) PHEMA.sub.-- INCHY HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 HYOGO/1/83) PRRP.sub.-- INCJJ RNA-DIRECTED RNA POL INFLUENZA C VIRUS (STRAIN C/ 509-536 SUB P3 JJ/50) PVMAT.sub.-- INCJJ MATRIX (M) PROTEIN INFLUENZA C VIRUS (STRAIN C/ 151-185 JJ/50) PVNS2.sub.-- INCJJ NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS (STRAIN C/ 71-98 NS2 JJ/50) PHEMA.sub.-- INCJH HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 496-572 JOHANNESBURG/1/66) PHEMA.sub.-- INCKY HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 KYOTO/41/82) PHEMA.sub.-- INCMI HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 MISSISSIPPI/80) PHEMA.sub.-- INCNA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 NARA/82) PHEMA.sub.-- INCP1 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 PIG/BEIJING/10/81) PHEMA.sub.-- INCP2 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 PIG/BEIJING/115/81) PHEMA.sub.-- INCP3 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 PIG/BEIJING/439/82) PHEMA.sub.-- INCTA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 TAYLOR/1233/47) PHEMA.sub.-- INCYA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 YAMAGATA/10/81) PENV.sub.-- MLVKI ENV POLYPROTEIN KIRSTEN MURINE LEUKEMIA 40-81 VIRUS PVGLB.sub.-- HSVMD GLYCOPROTEIN B PRECURSOR MAREK'S DISEASE HERPES 93-120 352-379 VIRUS (STRAIN RB-1B) PENV.sub.-- MCFF ENV POLYPROTEIN MINK CELL FOCUS-FORMING 473-512 MURINE LEUKEMIA VIRUS PENV.sub.-- MCFF3 ENV POLYPROTEIN MINK CELL FOCUS-FORMING 488-515 MURINE LEUKEMIA VIRUS (ISOLATE CI-3) PENV.sub.-- MLVMO ENV POLYPROTEIN MOLONEY MURINE LEUKEMIA 502-543 VIRUS PDNBI.sub.-- MCMVS MAJOR DNA-BINDING PROTEIN MURINE CYTOMEGALO VIRUS 584-618 (STRAIN SMITH) PIC18.sub.-- MCMVS PROB PROC & TRANSPORT PRO MURINE CYTOMEGALO VIRUS 661-691 (STRAIN SMITH) PVGLB.sub.-- MCMVS GLYCOPROTEIN B PRECURSOR MURINE CYTOMEGALO VIRUS 381-408 441-475 (STRAIN SMITH) PVE2.sub.-- PCPV1 E2 PROTEIN PYGMY CHIMPANZEE 267-294 327-361 PAPILLOMA VIRUS TYPE 1 PVE5.sub.-- PCPV1 PROBABLE E5 PROTEIN PYGMY CHIMPANZEE 35-62 PAPILLOMA VIRUS TYPE 1 PENV.sub.-- MLVRD ENV POLYPROTEIN RADIATION MURINE LEUKEMIA 497-538 VIRUS PPOL.sub.-- MLVRD POL POLYPROTEIN RADIATION MURINE LEUKEMIA 716-743 805-832 VIRUS PENV.sub.-- MLVRK ENV POLYPROTEIN RADIATION MURINE LEUKEMIA 497-538 VIRUS (STRAIN KAPLAN) PPOL.sub.-- MLVRK POL POLYPROTEIN RADIATION MURINE LEUKEMIA 101-128 190-217 VIRUS (STRAIN KAPLAN) PDNBI.sub.-- SCMBC MAJOR DNA-BINDING PROTEIN CIMIAN CYTOMEGALO VIRUS 435-462 532-559 (STRAIN COLBURN) PPOLG.sub.-- HPAVS GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS 207-241 1025-1052 1115-1192 (STRAIN AGM-27) PPOLG.sub.-- HPAVT GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS 203-237 (STRAIN CY-145) PENV.sub.-- SIVA1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 269-310 561-588 592-619 652-679 697-724 VIRUS (AGM155 ISOLATE) PPOL.sub.-- SIVA1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 431-458 547-574 637-671 VIRUS (AGM155 ISOLATE) PPOL.sub.-- SIVA2 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 45-72 VIRUS (AGM266 ISOLATE) PENV.sub.-- SIVAG ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 270-301 566-593 597-624 658-685 703-730 VIRUS (AGM3 ISOLATE) PPOL.sub.-- SIVAG POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 436-463 482-516 642-669 VIRUS (AGM3 ISOLATE) PPOL.sub.-- SIVA3 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 71-98 VIRUS (AGM385 ISOLATE) PENV.sub.-- SIVS4 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 281-308 553-612 642-669 691-718 VIRUS (F236/SMH4 ISOLATE) PGAG.sub.-- SIVS4 GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 88-115 VIRUS (F236/SMH4 ISOLATE) PPOL.sub.-- SIVS4 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 496-523 VIRUS (F236/SMH4 ISOLATE) PENV.sub.-- SIVAI ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 257-291 336-372 548-603 634-708 VIRUS (ISOLATE AGM/CLONE GRI-1) PGAG.sub.-- SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 473-507 VIRUS (ISOLATE AGM/CLONE GRI-1) PNEF.sub.-- SIVAI NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY 96-137 VIRUS (ISOLATE AGM/CLONE GRI-1) PPOL.sub.-- SIVAI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 478-515 VIRUS (ISOLATE AGM/CLONE GRI-1) VIF.sub.-- SIVAI VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY 2-36 VIRUS (ISOLATE AGM/CLONE GRI-1) PENV.sub.-- SIVGB ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 8-35 158-185 589-650 784-816 VIRUS (ISOLATE GB1) PPOL.sub.-- SIVGB POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 222-254 636-670 VIRUS (ISOLATE GB1) PENV.sub.-- SIVMK ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 553-608 VIRUS (K6W ISOLATE) PGAG.sub.-- SIVMK GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 88-115 VIRUS (K6W ISOLATE) PPOL.sub.-- SIVMK POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 533-560 VIRUS (K6W ISOLATE) PENV.sub.-- SIVML ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 549-608 VIRUS (K78 ISOLATE) PENV.sub.-- SIVM1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 120-150 550-609 671-715 VIRUS (MM142-83 ISOLATE) PPOL.sub.-- SIVM1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 553-560 VIRUS (MM142-83 ISOLATE) PENV.sub.-- SIVM2 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 156-215 277-289 VIRUS (MM251 ISOLATE) PENV.sub.-- SIVSP ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 286-313 554-595 646-722 VIRUS (PBJ/BC13 ISOLATE) PGAG.sub.-- SIVSP GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 88-115 VIRUS (PBJ/BC13 ISOLATE) PPOL.sub.-- SIVSP POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 499-526 VIRUS (PBJ/BC13 ISOLATE) PGAG.sub.-- SIVMS GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 88-115 VIRUS (STM ISOLATE) PENV.sub.-- SIVAT ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 3-30 268-298 590-617 651-678 VIRUS (TYO-1 ISOLATE) PPOL.sub.-- SIVAT POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 657-691 VIRUS (TYO-1 ISOLATE) PREV.sub.-- SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCY 41-68 VIRUS (TYO-1 ISOLATE) PENV.sub.-- MPMV ENV POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 422-470 PPOL.sub.-- MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 574-612 670-697 PGAG.sub.-- MPMV GAG POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 222-260 (MPMV) PEXON.sub.-- VZVD ALKALINE EXONUCLEASE VARICELLA-ZOSTER VIRUS 109-139 (STRAIN DUMAS) PHELI.sub.-- VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS 490-517 701-728 (STRAIN DUMAS) PRIR1.sub.-- VZVD RIBONUC-DIPHOSPH VARICELLA-ZOSTER VIRUS 119-146 REDUCT LARGE CHA (STRAIN DUMAS) PTEGU.sub.-- VZVD LARGE TEGUMENT PROTEIN VARICELLA-ZOSTER VIRUS 1121-1158 1579-1609 (STRAIN DUMAS) PUL14.sub.-- VZVD HYPOTHETICAL GENE 46 VARICELLA-ZOSTER VIRUS 64-101 PROTEIN (STRAIN DUMAS) PUL21.sub.-- VZVD GENE 38 PROTEIN VARICELLA-ZOSTER VIRUS 380-407 (STRAIN DUMAS) PUL34.sub.-- VZVD VIRION GENE 24 PROTEIN VARICELLA-ZOSTER VIRUS 112-139 (STRAIN DUMAS) PUL37.sub.-- VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS 107-134 485-512 719-746 976-1003 (STRAIN DUMAS) PUL41.sub.-- VZVD HOST SHUTOFF VIRION VARICELLA-ZOSTER VIRUS 330-364 PROTEIN (STRAIN DUMAS) PUL43.sub.-- VZVD GENE 15 MEMBRANE VARICELLA-ZOSTER VIRUS 129-156 312-349 PROTEIN (STRAIN DUMAS) PUL52.sub.-- VZVD PROB DNA REP GENE 6 VARICELLA-ZOSTER VIRUS 301-337 PROTEIN (STRAIN DUMAS) PVGLC.sub.-- VZVD GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 295-322 (STRAIN DUMAS) PVP40.sub.-- VZVD CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS 174-208 495-522 (STRAIN DUMAS) PVTER.sub.-- VZVD PROBABLE DNA PACKAGING VARICELLA-ZOSTER VIRUS 394-421 PROTEIN (STRAIN DUMAS) PVGLC.sub.-- VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 295-322 (STRAIN SCOTT) PDPOL.sub.-- WHV1 DNA POLYMERASE WOODCHUCK HEPATITIS 285-326 VIRUS 1 PDPOL.sub.-- WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS 290-331 VIRUS 59 PDPOL.sub.-- WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS 212-242 290-331 VIRUS 7 PDPOL.sub.-- WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS 211-241 289-330 VIRUS 8 PDPOL.sub.-- WHV8I DNA POLYMERASE WOODCHUCK HEPATITIS 212-242 290-331 VIRUS 8 - 107 .times. 178 .times. 4 SEARCH MOTIF RESULTS SUMMARY FOR ALL PROCARYOTIC PROTEINS PCGENE 107 .times. 178 .times. 4 Prokaryotic Sequences FILE NAME PROTEIN ORGANISM AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 P120K.sub.-- RICRI 120 KD SURFACE-EXPOSED RICKETTSIA RICKETTSII 83-110 240-298 355-382 638-672 746-838 1168-1202 PROTEIN P17K.sub.-- RICTY 17 KD ANTIGEN PRECURSOR RICKETTSIA TYPHI 67-94 P190K.sub.-- RICRI 190 KD ANTIGEN PRECURSOR RICKETTSIA RICKETTSII 241-268 406-487 607-634 754-781 829-856 904-931 1220-1254 1544-1571 1723-1750 (CELL SURFACE) 2065-2096 2131-2168 P22KD.sub.-- DESMO 22.6 KD PROTEIN DESULFUROCOCCUS MOBILIS 25-52 59-89 120-147 P40KD.sub.-- VIBAN 40 KD PROTEIN PRECURSOR VIBRIO ANGUILLARUM 153-196 P60IM.sub.-- ECOLI 60 KD INNER-MEMBRANE ESCHERICHIA COLI 511-538 PROTEIN P60IM.sub.-- PROMI 60 KD INNER-MEMBRANE PROTEUS MIRABILIS 14-41 PROTEIN P65KD.sub.-- ZYMMO 65 KD PROTEIN ZYMOMONAS MOBILIS 95-122 444-524 P6PGD.sub.-- BACSU PROB 6-PHOSPHOGLUCONATE BACILLUS SUBTILIS 24-51 218-246 DEHYDROGENASE P6PGD.sub.-- ECOLI 6-PHOSPHOGLUCONATE ESCHERICHIA COLI 205-232 DEHYDROGENASE P6PGD.sub.-- SALTY 6-PHOSPHOGLUCONATE SALMONELLA TYPHIMURIUM 205-232 DEHYDROGENASE PAACA.sub.-- STAAU 6'-AMINOGLYCOSIDE STAPHYLOCOCCUS AUREUS 450-477 N-ACETYLTRANSFERASE PAAT.sub.-- BACSP ASPARTATE AMINOTRANS- BACILLUS SP 146-173 185-212 FERASE PAAT.sub.-- ECOLI ASPARTATE AMINOTRANS- ESCHERICHIA COLI 351-378 FERASE PABC.sub.-- ECOLI ABC PROTEIN ESCHERICHIA COLI 176-203 PABIC.sub.-- LACLA ABORTIVE PHAGE RESIS- LACTOCOCCUS LACTIS 85-126 170-204 209-273 TANCE PROTEIN ABIC PACCR.sub.-- AGRTU TRANSCRIPTIONAL AGROBACTERIUM TUMEFACIENS 127-154 REPRESSOR ACCR PACEA.sub.-- ECOLI ISOCITRATE LYASE ESCHERICHIA COLI 398-432 PACON.sub.-- BACSU ACONITATE HYDRATASE BACILLUS SUBTILIS 48-75 PACON.sub.-- ECOLI ACONITATE HYDRATASE ESCHERICHIA COLI 41-68 613-640 PACOR.sub.-- ALCEU ACETOIN CATABOLISM REG ALCALIGENES EUTROPHUS 85-112 PRO PACP.sub.-- ECOLI ACYL CARRIER PROTEIN ESCHERICHIA COLI 4-31 PACRA.sub.-- ECOLI ACRIFLAVIN RESISTANCE ESCHERICHIA COLI 213-247 PROTEIN A PRECURSOR PACRB.sub.-- ECOLI ACRIFLAVIN RESISTANCE ESCHERICHIA COLI 520-551 PROTEIN B PACRF.sub.-- ECOLI ACRIFLAVIN RESISTANCE ESCHERICHIA COLI 512-550 726-753 PROTEIN F PACT3.sub.-- STRCO PUTATIVE DETOACYL STREPTOMYCES COELICOLOR 157-184 REDUCTASE PACTA.sub.-- LISMO ACTIN-ASSEMBLY INDUCING LISTERIA MONOCYTOGENES 237-264 576-603 PROTEIN PRECURSOR PACVS.sub.-- NOCLA ACV SYNTHETASE NOCARDIA LACTAMDURANS 3129-3163 PADAA.sub.-- BACSU METPHOSTRIESTER-DNA BACILLUS SUBTILIS 136-170 ALKYLTRANSFERASE PADDA.sub.-- BACSU ATP-DEPENDENT NUCLEASE BACILLUS SUBTILIS 398-425 454-481 522-556 1005-1032 SUBUNIT A PADDB.sub.-- BACSU ATP-DEPENDENT NUCLEASE BACILLUS SUBTILIS 257-284 870-903 943-977 SUBUNIT B PADHI.sub.-- CLOAB NADPH-DEPENDENT CLOSTRIDIUM ACETOBUTYLICUM 284-311 BETANOL DEHYDROGENASE PADHA.sub.-- CLOAB NADH-DEPENDENT BUTANOL CLOSTRIDIUM ACETOBUTYLICUM 298-325 DEHYDROGENASE A PADHB.sub.-- CLOAB NADH-DEPENDENT BUTANOL CLOSTRIDIUM ACETOBUTYLICUM 298-325 DEHYDROGENASE B PADHE.sub.-- CLOAB ALCOHOL DEHYDROGENASE CLOSTRIDIUM ACETOBUTYLICUM 653-680 779-806 PADHE.sub.-- ECOLI ALCOHOL DEHYDROGENASE ESCHERICHIA COLI 271-298 PADIY.sub.-- ECOLI PUTATIVE REGULATORY ESCHERICHIA COLI 45-72 PROTEIN ADIY PADP1.sub.-- MYCGE 140 KD ADHESION MYCOPLASMA GENITALIUM 90-131 697-724 923-950 990-1017 1169-1199 1387-1414 PRECURSOR PADP1.sub.-- MYCPN ADHESION P1 PRECURSOR MYCOPLASMA PNEUMONIAE 1557-1584 PADT.sub.-- RICPR ADP, ATP CARRIER PROTEIN RICKETTSIA PROWAZEKII 276-307 PAERA.sub.-- AERHY AEROLYSIN PRECURSOR AEROMONAS HYDROPHILA 278-305 PAGAL.sub.-- STRMU ALPHA-GALACTOSIDASE STREPTOCOCCUS MUTANS 419-483 597-633 PAGAR.sub.-- PSEAT BETA-AGARASE PRECURSOR PSEUDOMONAS ATLANTICA 26-53 PAGR.sub.-- STAAU ACCESSORY GENE STAPHYLOCOCCUS AUREUS 129-159 165-192 REGULATOR PROTEIN PAIL.sub.-- YEREN ATTACH INVAS LOCUS YERSINIA ENTEROCOLITICA 19-46 PROTEIN PRECURSOR PAK1H.sub.-- ECOLI ASPARTOKINASE I ESCHERICHIA COLI 3-30 466-493 503-530 PAK2H.sub.-- ECOLI ASPARTOKINASE II ESCHERICHIA COLI 51-78 608-635 PAK2.sub.-- BACSU ASPARTATE KINASE II ALPHA BACILLUS SUBTILIS 266-312 AND BETA SUBUNITS PAKAB.sub.-- CORGL ASPARTATE KINASE ALPHA CORYNEBACTERIUM GLUTMICUM 5-32 AND BETA SUBUNITS PALF.sub.-- ECOLI FRUCTOSE-BISPHOSPHATE ESCHERICHIA COLI 286-316 ALDOLASE PALGB.sub.-- PSEAE ALGINATE BIOSYN TRANSL PSEUDOMONAS AERUGINOSA 160-194 REG PROTEIN ALBG PALGE.sub.-- PSEAE ALGINATE PRODUCTION PSEUDOMONAS AERUGINOSA 349-376 PROTEIN ALGE PRECURSO PALGP.sub.-- PSEAE TRANSCRIPTIONAL REGULA- PSEUDOMONAS AERUGINOSA 81-115 LATORY PROTEIN ALGP PALKB.sub.-- PSEOL ALKANE-1 MONOOXYGENASE PSEDOMONAS OLEOVORANS 115-142 PALKT.sub.-- PSEOL RUBREDOXIN-NAD(+) PSEUDOMONAS OLEOVORANS 138-172 338-365 REDUCTASE PALR2.sub.-- ECOLI ALANINE RACEMASE, ESCHERICHIA COLI 9-36 CATABOLIC PRECURSOR PALR.sub.-- BACST ALANINE RACEMASE BACILLUS STEAROTHERMOPHILUS 326-353 PALSR.sub.-- BACSU ALS OPERON REGULATORY BACILLUS SUBTILIS 119-146 PROTEIN PALYS.sub.-- BACSP AUTOLYSIN PRECURSOR BACILLUS SP 157-187 PALYS.sub.-- BACSU AUTOLYSIN PRECURSOR BACILLUS SUBTILIS 147-191 PALYS.sub.-- STAAU AUTOLYSIN STRAPHYLOCOCCUS AUREUS 244-271 PAMIA.sub.-- STRPN AMIA PROTEIN PRECURSOR STREPTOCOCCUS PNEUMONIAE 223-264 297-338 446-473 PAMID.sub.-- PSECL AMIDASE PSEUDOMONAS CHLORORAPHIS 72-99 PAMIE.sub.-- STRPN OLIGOPEPTIDE TRANSPORT STREPTOCOCCUS PNEUMONIAE 187-214 PROTEIN AMIE PAMPA.sub.-- ECOLI AMINOPEPTIDASE A/I ESCHERICHIA COLI 111-138 199-226 PAMPC.sub.-- SERMA BETA-LACTAMASE SERRATIA MERCESCENS 231-258 PRECURSOR PAMPL.sub.-- RICPR CYTOSOL AMINOPEPTIDASE RICKETTSIA PROWAZEKII 3-47 72-99 PAMPN.sub.-- ECOLI AMINOPEPTIDASE N ESCHERICHIA COLI 655-682 PAMPP.sub.-- ECOLI X-PRO AMINOPEPTIDASE ESCHERICHIA COLI 110-137 PAMPT.sub.-- THEAQ AMINOPEPTIDASE T THERMUS AQUATICUS 281-308 PAMY1.sub.-- DICTH ALPHA-AMYLASE 1 DICTYOGLOMUS THERMOPHILUM 507-534 PAMY2.sub.-- DICTH ALPHA-AMYLASE 2 DICTYOGLOMUS THERMOPHILUM 151-178 507-534 PAMY2.sub.-- SALTY CYTOPLASMIC ALPHA- SALMONELLA TYPHIMURIUM 70-104 AMYLASE PAMY3.sub.-- DICTH ALPHA-AMYLASE 3 DICTYOGLOMUS THERMOPHILUM 280-307 PAMYB.sub.-- BACCI BETA-AMYLASE PRECURSOR BACILLUS CIRCULANS 61-88 PAMYB.sub.-- BACPO BETA-AMYLASE BACILLUS POLYMYXA 60-87 266-293 1143-1184 PAMYB.sub.-- CLOTU BETA-AMYLASE, THERMO- CLOSTRIDIUM THERMO- 269-296 378-405 459-486 PHILIC PRECURSOR SULFUROGENES PAMYG.sub.-- CLOSP GLUCOAMYLASE PRECURSOR CLOSTRIDIUM SP 103-148 480-510 PAMYM.sub.-- BACST MALTOGENIC ALPHA- BACILLUS STEAROTHERMOPHILUS 426-453 AMYLASE PRECURSOR PAMYR.sub.-- BACS8 RAW-STARCH-DIGESTING BACILLUS SP 210-237 435-465 615-642 AMYLASE PAMY.sub.-- AERHY ALPHA-AMYLASE AEROMONAS HYDROPHILA 415-453 PRECURSOR PAMY.sub.-- ALTHA ALPHA-AMYLASE ALTEROMONAS HALOPLANKTIS 166-193 PRECURSOR PAMY.sub.-- BACAM ALPHA-AMYLASE BACILLUS AMYLOLIQUE- 102-136 PRECURSOR FACIENS PAMY.sub.-- BACCI ALPHA-AMYLASE BACILLUS CIRCULANS 212-239 437-474 PRECURSOR PAMY.sub.-- BACME ALPHA-AMYLASE BACILLUS MEGATERIUM 61-88 441-482 PRECURSOR PAMY.sub.-- BACSU ALPHA-AMYLASE BACILLUS SUBTILIS 165-205 281-308 PRECURSOR PAMY.sub.-- BUTFI ALPHA-AMYLASE BUTYRIVIBRIO FIBRISOLVENS 377-418 546-573 579-606 795-822 PRECURSOR PAMY.sub.-- CLOAB PUTATIVE ALPHA-AMYLASE CLOSTRIDIUM ACETOBUTYLICUM 283-310 PAMY.sub.-- CLOTU ALPHA-AMYLASE CLOSTRIDUM THERMO- 431-468 612-642 PRECURSOR SULFUROGENES PAMY.sub.-- STRLM ALPHA-AMYLASE STREPTOMYCES LIMOSUS 173-200 PRECURSOR PANFA.sub.-- AZOVI NITROGEN FIXATION AZOTOBACTER VINELANDII 232-259 PROTEIN ANFA PANFD.sub.-- AZOVI NITROGENASE IRON-IRON AZOTOBACTER VINELANDII 95-122 PROTEIN ALPHA CHAIN PANFK.sub.-- AZOVI NITROGENASE IRON-IRON AZOTOBACTER VINELANDII 369-396 PROTEIN BETA CHAIN PANGR.sub.-- VIBAN ANGR PROTEIN VIBRIO ANGUILLARIUM 93-120 169-203 PAPCE.sub.-- FREDI PHYCOBILISOME 120 KD FREMYELLA DIPLOSIPHON 51-78 LINKER POLYPEPTIDE PAPCE.sub.-- SYNP6 PHYCOBILISOME LINKER SYNECHOCOCCUS SP 37-64 585-615 POLYPEPTIDE PAPCE.sub.-- SYNY4 PHYCOBILISOME 120 KD SYNECHOCYSTIS SP 52-79 LINKER POLYPEPTIDE PAPHC.sub.-- SALTY ALKYL HYDROPEROXIDE SALMONELLA TYPHIMURIUM 62-89 REDUCTASE C22 PROTEIN PAPI.sub.-- ACHLY PROTEASE I PRECURSOR ACHROMOBACTER LYTICUS 478-505 PAPPC.sub.-- ECOLI PROBABLE CYTOCHROME ESCHERICHIA COLI 118-148 OXIDASE SUBUNIT I PAPRD.sub.-- PSEAE ALKALINE PROTEASE SECRE- PSEUDOMONAS AERUGINOSA 416-450 TION PROTEIN APRD PAPRE.sub.-- PSEAE ALKALINE PROTEASE SECRE- PSEUDOMONAS AERUGINOSA 133-193 208-235 247-277 TION PROTEIN APRE PAPT.sub.-- ECOLI ADENINE PHOSPHORIBOSYL- ESCHERICHIA COLI 121-148 TRANSFERASE PAPU.sub.-- THEET ALPHA-AMYLASE- THERMOANAEROBACTER 276-303 347-374 936-982 987-1014 1210-1254 1381-1408 PULLULANASE PRECURSOR ETHANOLICUS PARCA.sub.-- MYCAR ARGININE DEIMINASE MYCOPLASMA ARGININI 60-87 218-245 PARCB.sub.-- ECOLI AEROBIC RESPIRATION ESCHERICHIA COLI 102-150 302-329 399-426 CONTROL PROTEIN ARCB PARCD.sub.-- PSEAE PROBABLE ARGININE/ PSEUDOMONAS AERUGINOSA 274-301 386-420 ORNITHINE ANTIPORTER PARGA.sub.-- ECOLI AMINO-ACID ACETYL- ESCHERICHIA COLI 82-109 TRANSFERASE PARGT.sub.-- ECOLI LYS-ARG-ORN-BINDING ESCHERICHIA COLI 84-111 PROTEIN (LAO) PRECURSO PAROA.sub.-- STAAU PHOSPHOSHIKIMATE 1- STAPHYLOCOCCUS AUREUS 86-120 CARBOXYVINYLTRANSFER PAROC.sub.-- ECOLI CHORISMATE SYNTHASE ESCHERICHIA COLI 68-95 PAROC.sub.-- SALTI CHORISMATE SYNTHASE SALMONELLA TYPHI 68-95 PAROD.sub.-- BACSU DEHYDROQUINATE BACILLUS SUBTILIS 49-76 DEHYDRATASE PAROK.sub.-- ECOLI SHIKIMATE KINASE I ESCHERICHIA COLI 84-118 PARP4.sub.-- STRPY IGA RECEPTOR PRECURSOR STREPTOCOCCUS PYOGENES 12-46 127-157 266-324 PARP.sub.-- ECOLI ARP PROTEIN ESCHERICHIA COLI 255-282 PARSA.sub.-- ECOLI ARSENICAL PUMP-DRIVING ESCHERICHIA COLI 201-238 ATPASE PARSB.sub.-- ECOLI ARSENICAL PUMP ESCHERICHIA COLI 291-318 MEMBRANE PROTEIN PARSB.sub.-- STAAU ARSENICAL PUMP STAPHYLOCOCCUS AUREUS 27-71 295-322 MEMBRANE PROTEIN PARSB.sub.-- STAXY ARSENICAL PUMP STAPHYLOCOCCUS XYLOSUS 27-71 295-322 MEMBRANE PROTEIN PARSR.sub.-- STAAU ARSENICAL RESIST OPERON STAPHYLOCOCCUS AUREUS 56-93 REPRESSOR PROTEIN PARTA.sub.-- ECOLI ARTA PROTEIN ESCHERICHIA COLI 3-30 PARTI.sub.-- ECOLI TRANSPORT SYSTEM ESCHERICHIA COLI 105-132 213-240 PROTEIN ARTI PARTP.sub.-- ECOLI TRANSPORT SYSTEM ESCHERICHIA COLI 176-206 PROTEIN ARTP PASA1.sub.-- ENTFA AGGREGATION SUBSTANCE ENTEROCOCCUS FAECALIS 195-254 478-505 799-826 859-896 PRECURSOR PASNA.sub.-- ECOLI ASPARTATE-AMMONIA ESCHERICHIA COLI 127-158 LIGASE PASNB.sub.-- ECOLI ASPARAGINE SYNTHETASE B ESCHERICHIA COLI 450-477 PASNC.sub.-- ECOLI REGULATORY PROTEIN ASNC ESCHERICHIA COLI 116-143 PASPA.sub.-- BACSU ASPARTATE AMMONIA- BACILLUS SUBTILIS 7-34 LYASE PASPA.sub.-- ECOLI ASPARTATE AMMONIA- ESCHERICHIA COLI 204-236 LYASE PASPA.sub.-- SERMA ASPARTATE AMMONIA- SERRATIA MARCESCENS 204-231 LYASE PASPG.sub.-- BACLI L-ASPARAGINASE BACILLUS LICHENIFORMIS 252-288 PASPG.sub.-- ERWCH L-ASPARAGINASE ERWINIA CHRYSANTHEMI 188-218 PRECURSOR PASPQ.sub.-- ACIGL GLUTAMINASE- ACINETOBACTER GLUTA- 46-80 ASPARAGINASE MINASIFICANS PASSY.sub.-- ECOLI ARGININOSUCCINATE ESCHERICHIA COLI 354-381 SYNTHASE PASSY.sub.-- METBA ARGININOSUCCINATE METHANOSARCINA BARKERI 287-314 SYNTHASE PATBP.sub.-- STAAU POTENTIAL ATP-BINDING STAPHYLOCOCCUS AUREUS 41-68 201-245 PROTEIN PATKA.sub.-- ENTFA POTASSIUM/COOPER- ENTEROCOCCUS FAECALIS 41-80 347-374 TRANSPORTING ATPASE A PATKB.sub.-- ENTFA POTASSIUM/COOPER- ENTEROCOCCUS FAECALIS 280-310 450-477 TRANSPORTING ATAPSE B PATMBD.sub.-- SALTY MG (2+) TRANSPORT ATPASE, SALMONELLA TYPHIMURIUM 503-530 P-TYPE PATP6.sub.-- SYNP6 ATP SYNTHASE A CHAIN SYNECHOCOCCUS SP 233-260 PATP6.sub.-- VIBAL ATP SYNTHASE A CHAIN VIBRIO ALGINOLYTICUS 11-38 PATPA.sub.-- ANASP ATP SYNTHASE ALPHA ANABAENA SP 9-36 96-130 CHAIN PATPA.sub.-- BACME ATP SYNTHASE ALPHA BACILLUS MEGATERIUM 4-36 453-480 CHAIN PATPA.sub.-- ECOLI ATP SYNTHASE ALPHA ESCHERICHIA COLI 486-513 CHAIN PATPA.sub.-- ENTFA ATP SYNTHASE ALPHA ENTEROCOCCUS FAECALIS 4-36 484-518 CHAIN PATPA.sub.-- MYCGA ATP SYNTHASE ALPHA MYCOPLASMA GALLISEPTICUM 362-409 CHAIN PATPA.sub.-- PROMO ATP SYNTHASE ALPHA PROPIONIGENIUM MODESTUM 6-36 CHAIN PATPA.sub.-- RHORU ATP SYNTHASE ALPHA RHODOSPIRILLUM RUBRUM 165-200 459-486 CHAIN PATPA.sub.-- SULAC ATPASE ALPHA CHAIN SULFOLOBUS ACIDOCALDARIUS 318-345 562-589 PATPA.sub.-- SYNP1 ATP SYNTHASE ALPHA SYNECHOCOCCUS SP 7-44 CHAIN PATPA.sub.-- SYNP6 ATP SYNTHASE ALPHA SYNECHOCOCCUS SP 8-45 362-389 CHAIN PATPA.sub.-- SYNY3 ATP SYNTHASE ALPHA SYNECHOCYSTIS SP 8-37 454-500 CHAIN PATPA.sub.-- THEP3 ATP SYNTHASE ALPHA THERMOPHILIC BACTERIUM PS-3 9-36 CHAIN PATPA.sub.-- VIBAL ATP SYNTHASE ALPHA VIBRIO ALGINOLYTICUS 464-513 CHAIN PATPB.sub.-- ANASP ATP SYNTHASE BETA CHAIN ANABAENA SP 280-307 370-397 PATPB.sub.-- BACFI ATP SYNTHASE BETA CHAIN BACILLUS FIRMUS 163-190 358-385 PATPB.sub.-- MYCGA ATP SYNTHASE BETA CHAIN MYCOPLASMA GALLISEPTICUM 375-402 PATPB.sub.-- RHORU ATP SYNTHASE BETA CHAIN RHODOSPIRILLUM RUBRUM 359-386 PATPB.sub.-- SULAC ATPASE BETA CHAIN SULFOLOBUS ACIDOCALDARIUS 164-191 PATPB.sub.-- SYNP1 ATP SYNTHASE BETA CHAIN SYNECHOCOCCUS SP 381-408 PATPB.sub.-- SYNP6 ATP SYNTHASE BETA CHAIN SYNECHOCOCCUS SP 291-318 381-408 PATPB.sub.-- SYNY3 ATP SYNTHASE BETA CHAIN SYNECHOCYSTIS SP 381-408 PATPD.sub.-- ANASP ATP SYNTHASE DELTA CHAIN ANABAENA SP 109-139 143-170 PATPD.sub.-- BACFI ATP SYNTHASE DELTA CHAIN BACILLUS FIRMUS 63-90 133-160 PATPD.sub.-- BACME ATP SYNTHASE DELTA CHAIN BACILLUS MEGATERIUM 132-159 PATPD.sub.-- ENTFA ATP SYNTHASE DELTA CHAIN ENTEROCOCCUS FAECALIS 14-41 PATPD.sub.-- PROMO ATP SYNTHASE DELTA CHAIN PROPIONIGENIUM MODESTUM 79-116 118-149 PATPD.sub.-- RHOBL ATP SYNTHASE DELTA CHAIN RHODOPSEUDOMONAS BLASTICA 125-152 PATPD.sub.-- RHORU ATP SYNTHASE DELTA CHAIN RHODOSPIRILLUM RUBRUM 119-146 PATPD.sub.-- SYNP1 ATP SYNTHASE DELTA CHAIN SYNECHOCOCCUS SP 100-127 PATPD.sub.-- SYNY3 ATP SYNTHASE DELTA CHAIN SYNECHOCYSTIS SP 113-147 PATPD.sub.-- VIBAL ATP SYNTHASE DELTA CHAIN VIBRIO ALGINOLYTICUS 110-137 PATPE.sub.-- BACFI ATP SYNTHASE EPSILON BACILLUS FIRMUS 53-80 CHAIN PATPE.sub.-- MYCGA ATP SYNTHASE EPSILON MYCOPLASMA GALLISEPTICUM 99-126 CHAIN PATPE.sub.-- PROMO ATP SYNTHASE EPSILON PROPIONIGENIUM MODESTUM 100-127 CHAIN PATPE.sub.-- SYNP1 ATP SYNTHASE EPSILON SYNECHOCOCCUS SP 72-106 PATPF.sub.-- ANASP ATP SYNTHASE B CHAIN ANABAENA SP 17-44 51-78 137-164 PATPF.sub.-- BACFI ATP SYNTHASE B CHAIN BACILLUS FIRMUS 110-151 PATPF.sub.-- BACME ATP SYNTHASE B CHAIN BACILLUS MEGATERIUM 55-85 122-170 PATPF.sub.-- MYCGA ATP SYNTHASE B CHAIN MYCOPLASMA GALLISEPTICUM 82-135 170-197 PATPF.sub.-- SNYP1 ATP SYNTHASE B CHAIN SYNECHOCOCCUS SP 15-49 111-159 PATPF.sub.-- SYNP6 ATP SYNTHASE B CHAIN SYNECHOCOCCUS SP 12-39 128-155 PATPF.sub.-- THEP3 ATP SYNTHASE B CHAIN THERMOPHILIC BACTERIUM PS-3 50-77 PRECURSOR PATPG.sub.-- ANASP ATP SYNTHASE GAMMA ANABAENA SP 276-310 CHAIN PATPG.sub.-- ECOLI ATP SYNTHASE GAMMA ESCHERICHIA COLI 253-283 CHAIN PATPG.sub.-- MYCGA ATP SYNTHASE GAMMA MYCOPLASMA GALLISEPTICUM 28-62 92-140 CHAIN PATPG.sub.-- RHORU ATP SYNTHASE GAMMA RHODOSPIRILLUM RUBRUM 270-297 CHAIN PATPG.sub.-- SYNP1 ATP SYNTHASE GAMMA SYNECHOCOCCUS SP 280-307 CHAIN PATPG.sub.-- SYNY3 ATP SYNTHASE GAMMA SYNECHOCYSTIS SP 96-126 280-307 CHAIN PATP1.sub.-- MYCGA ATP SYNTHASE PROTEIN I MYCOPLASMA GALLISPETICUM 133-167 PATPX.sub.-- ANASP ATP SYNTHASE B' CHAIN ANABAENA SP 129-156 PATPX.sub.-- BACFI ATP SYNTHASE BETA CHAIN BACILLUS FIRMUS 162-189 356-383 PATPX.sub.-- RHORU ATP SYNTHASE B' CHAIN RHODOSPIRILLUM RUBRUM 40-74 PATPX.sub.-- SYNP1 ATP SYNTHASE B' CHAIN SYNECHOCOCCUS SP 57-110 128-155 PATPX.sub.-- SYNP6 ATP SYNTHASE B' CHAIN SYNECHOCOCCUS SP 70-100 PATPX.sub.-- SYNY3 ATP SYNTHASE B' CHAIN SYNECHOCYSTIS SP 108-135 PATPZ.sub.-- BACME ATP SYNTHASE PROTEIN I BACILLUS MEGATERIUM 14-62 PATPZ.sub.-- SYNP1 ATP SYNTHASE PROTEIN I SYNECHOCOCCUS SP 90-131 PAVRB.sub.-- PSESG AVIRULENCE B PROTEIN PSEUDOMONAS SYRINGAE 184-211 233-260 PBA71.sub.-- EUBSP 7-ALPHA-HYDROXYSTEROID EUBACTERIUM SP 26-53 DEHYDROGENASE PBA72.sub.-- EUBSP 7-ALPHA-HYDROXYSTEROID EUBACTERIUM SP 26-53 DEHYDROGENASE PBACH.sub.-- HALHM HALORHODOPSIN HALOBACTERIUM HALOBIUM 145-179 PBACH.sub.-- HALSG HALORHODOPSIN HALOBACTERIUM SP 180-214 PRECURSOR PBAES.sub.-- ECOLI SENSOR PROTEIN BAES ESCHERICHIA COLI 152-186 PBAG.sub.-- STRAG IGA FC RECEPTOR STREPTOCOCCUS AGALACTIAE 92-119 138-204 267-204 267-306 343-385 487-524 562-589 1014-1041 PRECURSOR PBAHG.sub.-- VITSP BACTERIAL HEMOGLOBIN VITREOSCILLA SP 119-146 PBAIC.sub.-- EUBSP BILE ACID-INDUCIBLE EUBACTERIUM SP 423-450 OPERON PROTEIN C PBARA.sub.-- ECOLI SENSOR PROTEIN BARA ESCHERICHIA COLI 334-361 425-455 PBASS.sub.-- ECOLI SENSOR PROTEIN BASS ESCHERICHIA COLI 122-156 PBAT.sub.-- HALHA PUTATIVE BACTERIO-OPSIN HALOBACTERIUM HALOBIUM 408-442 ACTIVATOR PBAX.sub.-- ECOLI BAX PROTEIN ESCHERICHIA COLI 21-64 PBCCP.sub.-- ECOLI BIOTIN CARBOXYL CARRIER ESCHERICHIA COLI 6-35 PROTEIN PBCHH.sub.-- RHOCA METHYLTRANSFERASE RHODOBACTER CAPSULATUS 1000-1032 PBCHN.sub.-- RHOCA PROTOCHLOROPHYLLIDE RHODOBACTER CAPSULATUS 249-276 REDUCTASE 46 KD CHAIN PBCN5.sub.-- CLOPE BACTERIOCIN BCN5 CLOSTRIDIUM PERFRINGENS 72-99 585-646 PBCPA.sub.-- PROAE BACTERIOCHLOROPHYLL A PROSTHECOCHLORIS AESTUARII 63-93 PROTEIN PBCSC.sub.-- ACEXY CELLULOSE SYNTHASE ACETOBACTER XYLINUM 131-158 1055-1082 OPERON C PROTEIN PBCSD.sub.-- ACEXY CELLULOSE SYNTHASE ACETOBACTER XYLINUM 10-37 OPERON D PROTEIN PBENA.sub.-- ACICA BENZOATE 1,2-DIOXYGENASE ACINETOBACTER CALCOACETICUS 190-217 ALPHA SUBUNIT PBETT.sub.-- ECOLI HIGH AFFINITY CHOLINE ESCHERICHIA COLI 243-270 TRANSPORT PROTEIN PBEXA.sub.-- HAEIN BEXA PROTEIN HAEMOPHILUS INFLUENZAE 23-50 PBEXC.sub.-- HAEIN BEXC PROTEIN HAEMOPHILUS INFLUENZAE 157-184 226-253 PBEXD.sub .-- HAEIN BEXD PROTEIN HAEMOPHILUS INFLUENZAE 205-239 PBFR.sub.-- NITWI BACTERIOFERRITIN NITROBACTER WINOGRADSKYI 8-35 PBGA2.sub.-- ECOLI EVOLVED BETA-GALACTO- ESCHERICHIA COLI 955-985 SIDASE ALPHA-SUBUNIT PBGAL.sub.-- BACST BETA-GALACTOSIDASE BACILLUS STEAROTHERMOPHILUS 599-633 PBGAL.sub.-- CLOAB BETA-GALACTOSIDASE CLOSTRIDIUM ACETOBUTYLICUM 824-851 PBGAL.sub.-- CLOTU BETA-GALACTOSIDASE CLOSTRIDIUM THERMO- 161-191 SULFUROGENES PBGAL.sub.-- KLEPN BETA-GALACTOSIDASE KLEBSIELLA PNEUMONIAE 245-272 PBGAL.sub.-- LACDE BETA-GALACTOSIDASE LACTOBACILLUS DELBRUECKII 305-332 PBGAL.sub.-- STRTR BETA-GALACTOSIDASE STREPTOCOCCUS THERMOPHILUS 188-215 PBGAL.sub.-- SULSO BETA-GALACTOSIDASE SULFOLOBUS SOLFATARICUS 59-86 179-206 PBGAM.sub.-- LEULA BETA-GALACTOSIDASE LEUCONOSTOC LACTIS 129-156 SMALL SUBUNIT PBGAM.sub.-- SULSO BETA-GALACTOSIDASE SULFOLOBUS SOLFATARICUS 106-140 PBGLA.sub.-- CLOTM BETA-GLUCOSIDASE A CLOSTRIDIUM THERMOCELLUM 353-380 418-445 PBGLB.sub.-- CLOTM THERMOSTABLE BETA- CLOSTRIDIUM THERMOCELLUM 259-286 375-409 554-581 631-665 GLUCOSIDASE B PBGLR.sub.-- ECOLI BETA-GLUCURONIDASE ESCHERICHIA COLI 464-494 536-563 PBGLS.sub.-- AGRSP BETA-GLUCOSIDASE AGROBACTERIUM SP 421-448 PBGLS.sub.-- BUTFI BETA-GLUCOSIDASE A BUTYRIVIBRIO FIBRISOLVENS 85-112 435-462 692-719 738-765 PBIN3.sub.-- STAAU POTENTIAL DNA-INVERTASE STAPHYLOCOCCUS AUREUS 60-87 BIN3 PBINL.sub.-- STAAU TRANSPOSON TN552 STAPHYLOCOCCUS AUREUS 163-197 RESOLVASE PBINR.sub.-- STAAU DNA-INVERTASE BINR STAPHYLOCOCCUS AUREUS 163-190 PGIOA.sub.-- BACSH AMINOTRANSFERASE BACILLUS SPHAERICUS 33-60 PBIOB.sub.-- BACSH BIOTIN SYNTHETASE BACILLUS SPHAERICUS 145-172 PBIOB.sub.-- ECOLI BIOTIN SYNTHETASE ESCHERICHIA COLI 130-157 PBIOD.sub.-- BACSH DETHIOBIOTIN SYNTHASE BACILLUS SPHAERICUS 144-171 PBLA1.sub.-- BACCE BETA-LACTAMASE BACILLUS CEREUS 91-118 275-305 PRECURSOR, TYPE I PBLA1.sub.-- HAEIN BETA-LACTAMASE ROB-1 HAEMOPHILUS INFLUENZAE 152-179 204-231 PRECURSOR PBLA2.sub.-- BACCE BETA-LACTAMASE BACILLUS CEREUS 18-67 201-228 PRECURSOR, TYPE II PBLA2.sub.-- BACSP BETA-LACTAMASE BACILLUS SP 18-67 PRECURSOR, TYPE II PBLA3.sub.-- BACCE BETA-LACTAMASE BACILLUS CEREUS 35-83 95-129 PRECURSOR, TYPE III PBLA4.sub.-- PSEAE BETA-LACTAMASE PSE-4 PSEUDOMONAS AERUGINOSA 19-50 PRECURSOR PBLAB.sub.-- BACCE BETA-LACTAMASE BACILLUS CEREUS 20-66 200-227 PRECURSOR, TYPE II PBLAB.sub.-- BACFR BETA-LACTAMASE BACTEROIDES FRAGILIS 22-49 PRECURSOR, TYPE II PBLAC.sub.-- BACCE BETA-LACTAMASE BACILLUS CEREUS 93-120 276-303 PRECURSOR, TYPE I PBLAC.sub.-- BACLI BETA-LACTAMASE BACILLUS LICHENIFORMIS 47-74 86-115 PRECURSOR PBLAC.sub.-- PROMI BETA-LACTAMASE PROTEUS MIRABILIS 191-221 PRECURSOR PBLAC.sub.-- PROVU BETA-LACTAMASE PROTEUS VULGARIS 4-38 240-267 PBLAC.sub.-- STRAL BETA-LACTAMASE STREPTOMYCES ALBUS G 43-70 PRECURSOR PBLAD.sub.-- KLEPN BETA-LACTAMASE KLEBSIELLA PNEUMONIAE 121-148 PRECURSOR PBLAI.sub.-- STAAU PENICILLINASE REPRESSOR STAPHYLOCOCCUS AUREUS 19-74 99-126 PBLAO.sub.-- ECOLI BETA-LACTAMASE ESCHERICHIA COLI 118-166 235-262 PRECURSOR PBLAP.sub.-- ECOLI BETA-LACTAMASE PSE-2 ESCHERICHIA COLI 155-196 PRECURSOR PBLAR.sub.-- BACLI REGULATORY PROTEIN BACILLUS LICHENIFORMIS 129-156 515-552 BLAR1 PBLAR.sub.-- STAAU REGULATORY PROTEIN STAPHYLOCOCCUS AUREUS 87-114 122-161 234-261 281-312 503-539 BLAR1 PBMP.sub.-- TREPA BASIC MEMBRANE PROTEIN TREPONEMA PALLIDUM 312-346 PRECURSOR PBMR.sub.-- BACSU MULTIDRUG RESISTANCE BACILLUS SUBTILIS 277-304 PROTEIN PBNZA.sub.-- PSEPU BENZENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA 36-63 ALPHA SUBUNIT PBNZB.sub.-- PSEPU BENZENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA 119-153 BETA SUBUNIT PBNZD.sub.-- PSEPU P4 SUBUNIT PSEUDOMONAS PUTIDA 179-213 PBPS2.sub.-- DESAM BPS2 PROTEIN DESULFUROLOBUS AMBIVALENS 157-237 242-290 311-355 391-425 543-573 PBRAB.sub.-- PSEAE CARRIER PROTEIN PSEUDOMONAS AERUGINOSA 260-287 313-340 PBRAE.sub.-- PSEAE TRANSPORT PROTEIN BRAE PSEUDOMONAS AERUGINOSA 254-281 PBRAG.sub.-- PSEAE BRAG PROTEIN PSEUDOMONAS AERUGINOSA 7-34 PBTUB.sub.-- ECOLI VITAMIN B12 RECEPTOR ESCHERICHIA COLI 439-466 PRECURSOR PBTUE.sub.-- ECOLI VITAMIN B12 TRANSPORT ESCHERICHIA COLI 6-33 PERIPLASMIC PROTEIN PBVGA.sub.-- BORPE TRANSCRIPTION REGULATOR BORDETELLA PERTUSSIS 174-205 BVGA BORDETELLA BRONCHISEPTICA PBVGB.sub.-- BORPE PERIPLASMIC PROTEIN BVGB BORDETELLA PERTUSSIS 116-143 PRECURSOR PBVGC.sub.-- BORPE SENSOR PROTEIN BVGC BORDETELLA PERTUSSIS 39-66 202-229 PBVGS.sub.-- BORBR VIRULENCE BVGS PROTEIN BORDETELLA BRONCHISEPTICA 113-143 341-368 501-531 PRECURSOR PBXA.sub.-- CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM 313-340 686-729 733-762 815-842 851-893 968-995 1159-1207 TYPE A PRECURSOR PBXB.sub.-- CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM 666-693 720-762 802-890 1004-1031 1058-1089 TYPE B PRECURSOR PBXC1.sub.-- CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM 86-113 314-341 730-773 798-825 850-892 TYPE C1 PRECURSOR PBXD.sub.-- CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM 473-500 526-576 727-770 804-831 847-892 906-963 1060-1087 TYPE D PRECURSOR PBXE.sub.-- CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM 254-291 350-381 704-753 773-811 890-914 992-1019 1115-1149 TYPE E PRECURSOR PBXE.sub.-- CLOBU BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM 254-291 350-381 704-753 774-808 890-917 992-1019 1115-1149 TYPE E PRECURSOR PBXF.sub.-- CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM 669-710 735-772 892-919 1013-1040 1095-1122 1183-1210 TYPE F PRECURSOR PC550.sub.-- MICAE CYTOCHROME C550 MICROCYSTIS AERUGINOSA 3-30 PCADA.sub.-- BACFI PROBABLE CADMIUM- BACILLUS FIRMUS 30-57 100-131 165-192 276-306 533-567 TRANSPORTING ATPASE PCADA.sub.-- STAAU PROBABLE CADMIUM- STAPHYLOCOCCUS AUREUS 282-309 536-570 TRANSPORTING ATPASE PCADC.sub.-- ECOLI TRANSCRIPTIONAL ESCHERICHIA COLI 54-85 412-443 ACTIVATOR CADC PCAFA.sub.-- YERPE F1 CAPSULE ANCHORING YERSINIA PESTIS 203-240 416-457 530-557 619-646 PROTEIN PRECURSOR PCAPA.sub.-- BACAN CAPA PROTEIN BACILLUS ANTHRACIS 108-138 PCAPB.sub.-- BACAN CAPB PROTEIN BACILLUS ANTHRACIS 36-70 PCAPP.sub.-- ANANI PHOSPHOENOLPYRUVATE ANACYSTIS NIDULANS 248-293 CARBOXYLASE PCAPP.sub.-- ANASP PHOSPHOENOLPYRUVATE ANABAENA SP 98-125 157-184 687-728 CARBOXYLASE PCAPP.sub.-- CORGL PHOSPHOENOLPYRUVATE CORYNEBACTERIUM GLUTMICUM 15-42 CARBOXYLASE PCAPP.sub.-- ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA COLI 35-62 CARBOXYLASE PCARA.sub.-- BACSU CARBAMOYL-PHOSPHATE BACILLUS SUBTILIS 274-319 SYNTHASE PCARB.sub.-- BACSU CARBAMOYL-PHOSPHATE BACILLUS SUBTILIS 790-831 SYNTHASE PCARB.sub.-- ECOLI CARBAMOYL-PHOSPHATE ESCHERICHIA COLI 454-481 SYNTHASE LARGE CHAI PCAT2.sub.-- STAAU CHLORAMPHENICOL STAPHYLOCOCCUS AUREUS 7-34 87-114 ACETYLTRANSFERASE PCAT3.sub.-- STAAU CHLORAMPHENICOL STAPHYLOCOCCUS AUREUS 7-34 87-114 ACETYLTRANSFERASE PCATA.sub.-- ACICA CATECHOL 1,2-DIOXYGENASE ACINETOBACTER CALCOACETICUS 31-65 PCATA.sub.-- BACST PEROXIDASE/CATALASE BACILLUS STEAROTHERMOPHILUS 440-470 PCATA.sub.-- ECOLI CATALASE HPI ESCHERICHIA COLI 579-606 PCATA.sub.-- MICLU CATALASE MICROCOCCUS LUTEUS 453-480 PCATA.sub.-- SALTY CATALASE HPI SALMONELLA TYPHIMURIUM 515-542 580-607 PCATE.sub.-- ECOLI CATALASE HPII ESCHERICHIA COLI 175-202 PCAT.sub.-- CAMCO CHLORAMPHENICOL CAMPYLOBACTER COLI 84-111 ACETYLTRANSFERASE PCAT.sub.-- CLOBU CHLORAMPHENICOL CLOSTRIDIUM BUTYRICUM 88-115 ACETYLTRANSFERASE PCAT.sub.-- ECOLI CHLORAMPHENICOL ESCHERICHIA COLI 92-119 ACETYLTRANSFERASE PCAT.sub.-- PROMI CHLORAMPHENICOL PROTEUS MIRABILIS 92-119 ACETYLTRANSFERASE PCAT.sub.-- STAIN CHLORAMPHENICOL STAPHYLOCOCCUS INTERMEDIUS 7-34 87-114 ACETYLTRANSFERASE PCAT.sub.-- STRAG CHLORAMPHENICOL STREPTOCOCCUS AGALACTIAE 7-34 87-114 ACETYLTRANSFERASE PCBHE.sub.-- COXBU CBHE PROTEIN COXIELLA BURNETII 209-236 PCBPT.sub.-- THEVU CARBOXYPEPTIDASE T THERMOACTINOMYCES VULGARIS 48-75 PRECURSOR PCCA.sub.-- ECOLI TRNA NUCLEOTIDYL- ESCHERICHIA COLI 376-403 TRANSFERASE PCCMK.sub.-- SYNP7 CO2 CONC MECH PROTEIN SYNECHOCOCCUS SP 29-56 CCMK PCCMM.sub.-- SYNP7 CO2 CONC MECH PROTEIN SYNECHOCOCCUS SP 212-256 331-372 445-486 CCMM PCDAS.sub.-- THEET CYCLOMALTODEXTRINASE THERMOANAEROBACTER 305-332 ETHANOLICUS PCDG1.sub.-- BACMA CYCLOMALTODEXT BACILLUS MACERANS 439-466 616-643 GLUCANOTRANS PRECURSOR PCDG2.sub.-- BACMA CYCLOMALTODEXT BACILLUS MACERANS 210-251 436-466 615-642 GLUCANOTRANS PRECURSOR PCDGT.sub.-- BACCI CYCLOMALTODEXT BACILLUS CIRCULANS 217-244 442-472 594-651 GLUCANOTRANS PRECURSOR PCDGT.sub.-- BACLI CYCLOMALTODEXT BACILLUS LICHENIFORMIS 217-244 442-472 594-647 GLUCANOTRANS PRECURSOR PCDGT.sub.-- BACOH CYCLOMALTODEXT BACILLUS OHBENSIS 430-471 GLUCANOTRANS PRECURSOR PCDGT.sub.-- BAC50 CYCLOMALTODEXT BACILLUS SP 210-237 435-462 615-642 GLUCANOTRANS PRECURSOR PCDGT.sub.-- BAC52 CYCLOMALTODEXT BACILLUS SP 409-471 GLUCANOTRANS PRECURSOR PCDGT.sub.-- BAC53 CYCLOMALTODEXT BACILLUS SP 210-237 435-462 614-641 GLUCANOTRANS PRECURSOR PCDGT.sub.-- BACSP CYCLOMALTODEXT BACILLUS SP 210-237 435-465 615-642 GLUCANOTRANS PRECURSOR PCDGT.sub.-- BACSS CYCLOMALTODEXT BACILLUS SP 217-244 442-472 594-651 GLUCANOTRANS PRECURSOR PCDGT.sub.-- BACST CYCLOMALTODEXT BACILLUS STEAROTHERMOPHILUS 586-646 GLUCANOTRANS PRECURSOR PCDGT.sub.-- KLEPN CYCLOMALTODEXT KLEBSIELLA PNEUMONIAE 212-239 GLUCANOTRANS PRECURSOR PCEA1.sub.-- ECOLI COLICIN E1 PROTEIN ESCHERICHIA COLI 44-71 285-326 PCEA1.sub.-- SHISO COLICIN E1* PROTEIN SHIGELLA SONNEI 44-71 284-325 413-440 PCEA2.sub.-- ECOLI COLICIN E2 ESCHERICHIA COLI 334-368 PCEA3.sub.-- ECOLI COLICIN E3 ESCHERICHIA COLI 334-368 PCEA6.sub.-- ECOLI COLICIN E6 ESCHERICHIA COLI 334-368 PCEAB.sub.-- ECOLI COLICIN B ESCHERICHIA COLI 283-341 PCEAD.sub.-- ECOLI COLICIN D ESCHERICHIA COLI 284-311 PCEAM.sub.-- ECOLI COLICIN M ESCHERICHIA COLI 178-227 PCEAN.sub.-- ECOLI COLICIN N ESCHERICHIA COLI 119-146 173-200 PCEA.sub.-- CITFR COLICIN A CITROBACTER FREUNDII 228-258 PCEFD.sub.-- STRCL ISOPENICILLIN N EPIMERASE STREPTOMYCES CLAVULIGERUS 370-397 PCEIA.sub.-- ECOLI COLICIN IA PROTEIN ESCHERICHIA COLI 68-95 255-282 378-412 415-452 PCEIB.sub.-- ECOLI COLICIN IB PROTEIN ESCHERICHIA COLI 68-95 255-282 378-412 415-452 PCELA.sub.-- ACEXY UTP URIDYLYLTRANSFERASE ACETOBACTER XYLINUM 59-89 PCELA.sub.-- ECOLI PROTEIN CELA ESCHERICHIA COLI 76-103 PCFAA.sub.-- ECOLI CFA/1 FIMBRIAL SUBUNIT A ESCHERICHIA COLI 27-58 PRECURSOR PCFAC.sub.-- ECOLI CFA/1 FIMBRIAL SUBUNIT C ESCHERICHIA COLI 138-187 388-456 561-595 PRECURSOR PCFAD.sub.-- ECOLI CFA/1 FIMBRIAL SUBUNIT D ESCHERICHIA COLI 133-160 PRECURSOR PCFAE.sub.-- ECOLI CFA/1 FIMBRIAL SUBUNIT E ESCHERICHIA COLI 180-207 244-271 PRECURSOR PCH10.sub.-- ACYPS 10 KD CHAPERONIN ACRYTHOSIPHON PISUM 57-95 SYMBIOTIC BACTERIU PCH10.sub.-- BACSU 10 KD CHAPERONIN BACILLUS SUBTILIS 66-93 PCH10.sub.-- CHLTR 10 KD CHAPERONIN CHLAMYDIA TRACHOMATIS 64-91 PCH10.sub.-- ECOLI 10 KD CHAPERONIN ESCHERICHIA COLI 57-84 PCH10.sub.-- HAEDU 10 KD CHAPERONIN HAEMOPHILUS DUCREYI 68-95 PCH10.sub.-- LEGMI 10 KD CHAPERONIN LEGIONELLA MICDADEI 57-84 PCH10.sub.-- RICTS 10 KD CHAPERONIN RICKETTSIA TSUTSUGAMUSHI 65-92 PCH10.sub.-- THEP3 10 KD CHAPERONIN THERMOPHILIC BACTERIUM PS-3 66-93 PCH60.sub.-- ACYPS 60 KD CHAPERONIN ACYRTHOSIPHON PISUM 341-382 SYMBIOTIC BACTERIU PCH60.sub.-- AGRTU 60 KD CHAPERONIN AGROBACTERIUM TUMEFACIENS 117-163 339-370 425-466 PCH60.sub. -- AMOPS 60 KD CHAPERONIN AMOEBA PROTEUS SYMBIOTIC 299-333 BACTERIUM PCH60.sub.-- BACSU 60 KD CHAPERONIN BACILLUS SUBTILIS 298-332 337-364 PCH60.sub.-- BORBU 60 KD CHAPERONIN BORRELIA BURGODORFERI 125-163 299-368 PCH60.sub.-- BRUAB 60 KD CHAPERONIN BRUCELLA ABORTUS 117-144 339-366 PCH60.sub.-- CHLPN 60 KD CHAPERONIN CHLAMYDIA PNEUMONIAE 4-31 PCH60.sub.-- CHLTR 60 KD CHAPERONIN CHLAMYDIA TRACHOMATIS 4-31 PCH60.sub.-- CHRVI 60 KD CHAPERONIN CHROMATIUM VINOSUM 300-327 PCH60.sub.-- CLOAB 60 KD CHAPERONIN CLOSTRIDIUM ACETOBUTYLICUM 238-332 337-364 455-482 PCH60.sub.-- CLOPE 60 KD CHAPERONIN CLOSTRIDIUM PERFRINGENS 337-368 417-444 PCH60.sub.-- COXBU 60 KD CHAPERONIN COXIELLA BURNETII 300-327 348-382 PCH60.sub.-- HAEDU 60 KD CHAPERONIN HAEMOPHILUS DUCREYI 339-366 417-444 PCH60.sub.-- LEGMI 60 KD CHAPERONIN LEGIONELLA MICDADEI 299-333 PCH60.sub.-- LEGPN 60 KD CHAPERONIN LEGIONELLA PNEUMOPHILA 298-332 452-479 PCH60.sub.-- MYCLE 60 KD CHAPERONIN MYCOBACTERIUM LEPRAE 125-152 236-263 337-364 PCH60.sub.-- MYCTU 60 KD CHAPERONIN MYCOBACTERIUM TUBERCULOSIS 125-152 337-364 & BOVIS PCH60.sub.-- PSEAE 60 KD CHAPERONIN PSEUDOMONAS AERUGINOSA 339-366 PCH60.sub.-- RHILV 60 KD CHAPERONIN RHIZOBIUM LEGUMINOSARUM 117-163 322-370 425-466 PCH60.sub. -- RICTS 60 KD CHAPERONIN RICKETTSIA TSUTSUGAMUSHI 103-130 293-336 360-394 PCH60.sub.-- SYNP7 60 KD CHAPERONIN SYNECHOCOCCUS SP 308-335 337-380 PCH60.sub.-- SYNY3 60 KD CHAPERONIN SYNECHOCYSTIS SP 338-365 455-489 PCH60.sub.-- THEP3 60 KD CHAPERONIN THERMOPHILIC BACTERIUM PS-3 337-364 PCH62.sub.-- STRAL 60 KD CHAPERONIN 2 STREPTOMYCES ALBUS G 116-148 337-364 PCHB.sub.-- VIBHA N,N'-DIACETYLCHITOBIASE VIBRIO HARVEYI 21-48 772-799 PRECURSOR PCHEA.sub.-- BACSU CHEMOTAXIS PROTEIN CHEA BACILLUS SUBTILIS 373-400 590-617 PCHEA.sub.-- ECOLI CHEMOTAXIS PROTEIN CHEA ESCHERICHIA COLI 256-286 PCHEA.sub.-- SALTY CHEMOTAXIS PROTEIN CHEA SALMONELLA TYPHIMURIUM 162-197 PCHER.sub.-- BACSU CHEMOTAXIS PROTEIN BACILLUS SUBTILIS 124-151 METHYLTRANSFERASE PCHEW.sub.-- ECOLI PURINE-BINDING CHEMO- ESCHERICHIA COLI 68-115 TAXIS PROTEIN PCHEW.sub.-- SALTY PURINE-BINDING CHEMO- SALMONELLA TYPHIMURIUM 88-115 TAXIS PROTEIN PCHEY.sub.-- ECOLI CHEMOTAXIS PROTEIN CHEY ESCHERICHIA COLI 22-49 PCHEY.sub.-- SALTY CHEMOTAXIS PROTEIN CHEY SALMONELLA TYPHIMURIUM 22-49 PCHI1.sub.-- BACCI CHITINASE A1 PRECURSOR BACILLUS CIRCULANS 491-518 566-593 PCHIA.sub.-- ALTSO CHITINASE A PRECURSOR ALTEROMONAS SP 345-372 PCHIA.sub.-- SERMA CHITINASE A PRECURSOR SERRATIA MARCESCENS 346-373 PCHID.sub.-- BACCI CHITINASE B PRECURSOR BACILLUS CIRCULANS 102-161 189-216 PCHIT.sub.-- SACER CHITINASE SACCHAROPOLYSPORA ERYTHRAEA 92-119 PCHIT.sub.-- STRPL CHITINASE 63 PRECURSOR STREPTOMYCES PLICATUS 250-284 PCHMU.sub.-- BACSU CHORISMATE MUTASE BACILLUS SUBTILIS 3-37 PCHOD.sub.-- BREST CHOLESTEROL OXIDASE BREVIBACTERIUM STEROLICUM 263-290 PRECURSOR PCHTA.sub.-- VIBCH CHOLERA ENTEROTOXIN, A VIBRIO CHOLERAE 79-106 CHAIN PRECURSOR PCHVA.sub.-- AGRTU BETA-(1->2)GLUCAN EXPORT AGROBACTERIUM TUMEFACIENS 4-31 181-208 PROTEIN PCHVE.sub.-- AGRTU RECEPTOR PROTEIN CHVE AGROBACTERIUM TUMEFACIENS 100-127 PRECURSOR PCIRI.sub.-- CITFR CITROLYSIN PROTEIN I CITROBACTER FREUNDII 435-462 PCIRA.sub.-- ECOLI COLICIN I RECEPTOR ESCHERICHIA COLI 146-173 PRECURSOR PCISA.sub.-- BACSU PUTATIVE DNA BACILLUS SUBTILIS 378-405 RECOMBINASE PCISY.sub.-- ACIAN CITRATE SYNTHASE ACINETOBACTER ANITRATUM 143-170 PCISY.sub.-- BACCO CITRATE SYNTHASE BACILLUS COAGULANS 24-51 PCITA.sub.-- SALTY CITRATE-PROTON SYMPORT SALMONELLA TYPHIMURIUM 154-181 PCITN.sub.-- KLEPN CITRATE-PROTON SYMPORT KLEBSIELLA PNEUMONIAE 194-221 PCITN.sub.-- SALDU CITRATE-PROTON SYMPORT SALMONELLA DUBLIN 194-221 PCITN.sub.-- SALPU CITRATE-PROTON SYMPORT SALMONELLA PULLORUM 194-221 PCLCA.sub.-- PSEPU CHLOROCATECHOL 1,2- PSEUDOMONAS PUTIDA 13-36 DIOXYGENASE PCLD1.sub.-- ECOLI CHAIN LENGTH DETER- ESCHERICHIA COLI 133-167 MINANT PROTEIN PCLD2.sub.-- ECOLI CHAIN LENGTH DETER- ESCHERICHIA COLI 178-212 250-277 MINANT PROTEIN PCLD.sub.-- SALTY CHAIN LENGTH DETER- SALMONELLA TYPHIMURIUM 96-127 151-212 MINANT PROTEIN PCLOS.sub.-- CLOHI ALPHA-CLOSTRIPAIN CLOSTRIDIUM HISTOLYTICUM 30-58 497-524 PRECURSOR PCLPA.sub.-- ECOLI ATP-BINDING SUBUNIT CLPA ESCHERICHIA COLI 655-695 PCLPA.sub.-- RHOBL CLPA HOMOLOG PROTEIN RHODOPSEUDOMONAS BLASTICA 439-466 PCLPB.sub.-- BACNO CLPB HOMOLOG PROTEIN BACTEROIDES NODOSUS 116-157 442-476 558-595 PCLPB.sub.-- ECOLI CLPB PROTEIN ESCHERICHIA COLI 444-489 563-590 PCLPX.sub.-- AZOVI CLPX HOMOLOG PROTEIN AZOTOBACTER VINELANDII 215-242 332-359 PCLPX.sub.-- ECOLI ATP-BINDING SUBUNIT CLPX ESCHERICHIA COLI 255-282 PCN16.sub.-- ECOLI 2',3'-CYCLIC-NUC 2'- ESCHERICHIA COLI 50-77 PHOSPHODIESTERASE PRECURS PCODA.sub.-- ECOLI CYTOSINE DEAMINASE ESCHERICHIA COLI 102-129 PCOM1.sub.-- BACSU A COMPETENCE PROTEIN 1 BACILLUS SUBTILIS 108-135 186-213 PCOMQ.sub.-- BACSU COMPETENCE REGULATORY BACILLUS SUBTILIS 154-239 PROTEIN PCOP6.sub.-- STAAU COP-6 PROTEIN STAPHYLOCOCCUS AUREUS 7-53 PCOPB.sub.-- PSESM COPPER RESISTANCE PSEUDOMONAS SYRINGAE 140-167 PROTEIN B PRECURSOR PCORA.sub.-- ECOLI MAGNESIUM/COBALT ESCHERICHIA COLI 134-161 TRANSPORT PROTEIN CORA PCORA.sub.-- SALTY MAGNESIUM/COBALT SALMONELLA TYPHIMURIUM 134-161 TRANSPORT PROTEIN CORA PCOTE.sub.-- BACSU SPORE COAT PROTEIN E BACILLUS SUBTILIS 42-92 PCOX1.sub.-- BRAJA CYTOCHROME C OXIDASE BRADYRHIZOBIUM JAPONICUM 380-407 POLYPEPTIDE I PCOX1.sub.-- PARDE CYTOCHROME C OXIDASE PARACOCCUS DENITRIFICANS 383-410 POLYPEPTIDE I PCOX1.sub.-- RHOSH CYTOCHROME C OXIDASE RHODOBACTER SPHAEROIDES 396-423 POLYPEPTIDE I PCOXX.sub.-- BACFI OXIDASE ASSEMBLY FACTOR BACILLUS FIRMUS 36-63 PCOXX.sub.-- BACSU OXIDASE ASSEMBLY FACTOR BACILLUS SUBTILIS 49-76 PCPPB.sub.-- NEIGO CRYPTIC PLASMID PROTEIN B NEISSERIA GONORRHOEAE 72-99 165-209 PCPSB.sub.-- ECOLI MANNOSE-1-PHOSPHATE ESCHERICHIA COLI 309-336 GUANYLYLTRANSFERASE PCPSB.sub.-- SALTY MANNOSE-1-PHOSPHATE SALMONELLA TYPHIMURIUM 311-338 GUANYLYLTRANSFERASE PCPXA.sub.-- ECOLI SENSOR PROTEIN CPXA ESCHERICHIA COLI 254-281 PCPXG.sub.-- STRSQ CYTOCHROME P450 105C1 STREPTOMYCES SP 157-184 PCPXJ.sub.-- SACER 6-DEOXYERYTHRONOLIDE B SACCHAROPOLYSPORA ERYTHRAEA 233-260 (DEB) HYDROXYLASE PCPXM.sub.-- BACSU CYTOCHROME P450 109 BACILLUS SUBTILIS 240-283 PCPXN.sub.-- ANASP PROBABLE CYTOCHROME ANABAENA SP 98-125 P450 PCR27.sub.-- BACTI 27 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 153-187 PCR27.sub.-- BACTM 27 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 153-187 PCR41.sub.-- BACSH 1.9 KD INSECTICIDAL TOXIN BACILLUS SPHAERICUS 276-308 PCR42.sub.-- BACSH 1.9 KD INSECTICIDAL TOXIN BACILLUS SPHAERICUS 276-308 PCR43.sub.-- BACSH 41.9 KD INSECTICIDAL TOXIN BACILLUS SPHAERICUS 276-308 PCR70.sub.-- BACTD 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 207-234 252-279 429-463 PCR70.sub.-- BACTO 75 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 57-84 125-159 427-464 PCR70.sub.-- BACTT 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 199-226 244-271 421-455 PCR71.sub.-- BACTK 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 93-133 191-218 552-615 PCR72.sub.-- BACTI 72 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 74-111 383-414 PCR72.sub.-- BACTK 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 93-133 191-218 552-593 PCR77.sub .-- BACTI 77 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 308-335 502-529 PCREC.sub.-- ECOLI SENSOR PROTEIN CREC ESCHERICHIA COLI 103-130 PCRED.sub.-- ECOLI INNER MEMBRANE PROTEIN ESCHERICHIA COLI 94-121 CRED PCRP.sub.-- ECOLI CATABOLITE GENE ACTI- ESCHERICHIA COLI & 26-53 127-154 VATOR SHIGELLA FLEXNERI PCRP.sub.-- SALTY CATABOLITE GENE ACTI- SALMONELLA TYPHIMURIUM 26-53 127-154 VATOR KLEBSIELLA AEROGENES PCRTI.sub.-- ERWHE PHYTOENE DEHYDROGENASE ERWINIA HERBICOLA 231-258 PCRTI.sub.-- RHOCA PHYTOENE DEHYDROGENASE RHODOBACTER CAPSULATUS 389-416 PCRTJ.sub.-- RHOCA CRTJ PROTEIN RHODOBACTER CAPSULATUS 133-160 334-361 431-458 PCRYS.sub.-- BACTA 132 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 721-755 875-902 PCRYS.sub.-- BACTB 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 730-771 865-892 1053-1080 PCRYS.sub.-- BACTE 133 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 736-770 890-917 PCRYS.sub.-- BACTI 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 218-252 701-728 775-802 PCRYS.sub.-- BACTK 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 737-771 865-892 1053-1080 PCRYS.sub.-- BACTS 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 736-770 890-917 PCRYT.sub.-- BACTA 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 730-771 865-892 1053-1080 PCRYT.sub.-- BACTE 134 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 745-779 899-926 PCRYT.sub.-- BACTI 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 217-251 354-384 701-728 775-802 PCRYT.sub.-- BACTK 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 737-771 865-892 PCRYU.sub.-- BACTA 135 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 736-770 890-917 PCRYU.sub.-- BACTI 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 217-251 700-727 774-801 PCRYU.sub.-- BACTK 131 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 738-772 866-893 1054-1081 PCRYV.sub. -- BACTA 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 737-771 865-892 1053-1080 PCRYV.sub.-- BACTI 135 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 110-151 745-772 819-846 PCRYV.sub.-- BACTK 133 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 736-770 890-917 PCRYW.sub.-- BACTA 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 745-779 PCRYW.sub.-- BACTK 133 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 608-659 662-696 892-919 PCRYX.sub.-- BACTK 139 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 92-119 227-254 605-632 783-817 937-964 PCS32.sub.-- ECOLI C53 PILI SYNTHESIS 63 KD ESCHERICHIA COLI 42-69 226-253 290-317 344-378 PROTEIN PCS53.sub.-- ECOLI C53 PILI SYNTHESIS 48 KD ESCHERICHIA COLI 90-117 154-181 208-242 PROTEIN PCS34.sub.-- ECOLI C53 PILI SYNTHESIS 33 KD ESCHERICHIA COLI 20-47 74-108 PROTEIN PCSG.sub.-- HALHA CELL SURFACE GLYCOPRO- HALOBACTERIUM HALOBIUM 256-283 584-611 PROTEIN PRECURSOR PCSG.sub.-- HALVO CELL SURFACE GLYCOPRO- HALOBACTERIUM VOLCANII 143-170 237-271 PROTEIN PRECURSOR PCSG.sub.-- METFE CELL SURFACE GLYCOPRO- METHANOTHERMUS FERVIDUS 59-107 PROTEIN PRECURSOR PCSG.sub.-- METSC CELL SURFACE GLYCOPRO- METHANOTHERMUS SOCIABILIS 59-107 PROTEIN PRECURSOR PCSOB.sub.-- ECOLI CS1 FIMBRIAL SUBUNIT B ESCHERICHIA COLI 25-56 PRECURSOR PCTFA.sub.-- CLOAB COA-TRANSFERASE SUBUNIT CLOSTRIDIUM ACETOBUTYLICUM 118-145 A PCTFB.sub.-- CLOAB COA-TRANSFERASE SUBUNIT CLOSTRIDIUM ACETOBUTYLICUM 174-208 B PCTRB.sub.-- NEIME INNER-MEMBRANE PROTEIN NEISSERIA MENINGITIDIS 152-193 CTRB PCTX.sub.-- PSEAE CYTOTOXIN PRECURSOR PSEUDOMONAS AERUGINOSA 78-115 124-151 160-194 217-251 PCVAA.sub.-- ECOLI COLICIN V SECRETION ESCHERICHIA COLI 104-138 163-219 PROTEIN CVAA PCVAB.sub.-- ECOLI COLICIN V SECRETION ESCHERICHIA COLI 151-178 PROTEIN CVAB PCWPM.sub.-- BACBR MIDDLE CELL WALL PROTEIN BACILLUS BREVIS 197-224 411-438 1010-1044 PRECURSOR PCWPO.sub.-- BACBR OUTER CELL WALL PROTEIN BACILLUS BREVIS 178-216 560-587 947-988 PRECURSOR PCYAA.sub.-- BORPE ADENYLATE CYCLASE BORDETELLA PERTUSSIS 48-75 632-659 962-996 PRECURSOR PCYAA.sub.-- YERIN ADENYLATE CYCLASE YERSINIA INTERMEDIA 343-387 593-620 PCYAB.sub.-- BORPE CYAB PROTEIN BORDETELLA PERTUSSIS 541-568 PCYAD.sub.-- BORPE CYAD PROTEIN BORDETELLA PERTUSSIS 178-212 PCYAE.sub.-- BORPE CYAE PROTEIN BORDETELLA PERTUSSIS 313-340 PCYB.sub.-- RHOCA CYTOCHROME B RHODOBACTER CAPSULATUS 38-65 PCYDD.sub.-- ECOLI TRANSPORT PROTEIN CYDD ESCHERICHIA COLI 3-30 382-409 PCYF.sub.-- NOSSP APOCYTOCHROME F NOSTOC SP 209-243 CURSOR PCYMO.sub.-- ACISP CYCLOHEXANONE MONO- ACINETOBACTER SP 439-473 OXYGENASE PCYNT.sub.-- SYNP7 CARBONIC ANHYDRASE SYNECHOCOCCUS SP 170-200 PCYNX.sub.-- ECOLI CYNX PROTEIN ESCHERICHIA COLI 53-80 PCYOB.sub.-- ECOLI CYTOCHROME O UBIQUINOL ESCHERICHIA COLI 31-58 OXIDASE SUBUNIT 1 PCYPH.sub.-- SYNP7 PEPTIDYL-PROLYL CIS-TRANS SYNECHOCOCCUS SP 107-141 ISOMERASE PCYSA.sub.-- ECOLI SULFATE PERMEASE A ESCHERICHIA COLI 164-191 PROTEIN PCYSB.sub.-- ECOLI CYS REGULON TRANS- ESCHERICHIA COLI 3-30 CRIPTIONAL ACTIVATOR PCYSB.sub.-- SALTY CYS REGULON TRANS- SALMONELLA TYPHIMURIUM 3--30 CRIPTIONAL ACTIVATOR PCYSE.sub.-- ECOLI SERINE ACETYL- ESCHERICHIA COLI 164-191 TRANSFERASE PCYSE.sub.-- SALTY SERINE ACETYL- SALMONELLA TYPHIMURIUM 164-191 TRANSFERASE PCYSG.sub.-- ECOLI SIROHEM SYNTHASE ESCHERICHIA COLI 405-432 PCYSG.sub.-- SALTY SIROHEM SYNTHASE SALMONELLA TYPHIMURIUM 405-432 PCYSN.sub.- - ECOLI SULFATE ADENYLATE ESCHERICHIA COLI 64-91 TRANSFERASE SUBUNIT 1 PCYSW.sub.-- ECOLI SULFATE PERMEASE W ESCHERICHIA COLI 201-228 PROTEIN PCYSW.sub.-- SYNP7 SULFATE PERMEASE W SYNECHOCOCCUS SP 211-238 PROTEIN PCZCB.sub.-- ALCEU CATION EFFLUX SYSTEM ALCALIGENES EUTROPHUS 241-268 283-320 364-391 PROTEIN CZCB PCZCD.sub.-- ALCEU CATION EFFLUX SYSTEM ALCALIGENES EUTROPHUS 139-169 PROTEIN CZCD PDACB.sub.-- BACSU PENICILLIN-BINDING BACILLUS SUBTILIS 80-107 PROTEIN 5.degree. PRECURSOR PDADA.sub.-- ECOLI D-AMINO ACID DEHYDRO- ESCHERICHIA COLI 127-154 GENASE PDAGA.sub.-- ALTHA NA(+)-LINKED D-ALANINE ALTEROMONAS HALOPLANKTIS 332-373 GLYCINE PERMEASE PDAMX.sub.-- ECOLI DAMX PROTEIN ESCHERICHIA COLI 68-95 349-380 PDAPA.sub.-- ECOLI DIHYDRODIPICOLINATE ESCHERICHIA COLI 27-54 157-194 SYNTHASE PDAT1.sub.-- BACSU DNA-PROTEIN-CYSTEINE BACILLUS SUBTILIS 13-47 METHYLTRANSFERASE PDBHA.sub.-- ECOLI DNA-BINDING PROTEIN HU- ESCHERICHIA COLI 12-39 ALPHA PDBH.sub.-- CLOPA DNA-BINDING PROTEIN HU CLOSTRIDIUM PASTEURIANUM 12-53 PDCAM.sub.-- ECOLI DECARBOXYLASE ESCHERICHIA COLI 146-173 ENZYME PDCDA.sub.-- CORGL DIAMINOPIMELATE CORYNEBACTERIUM GLUTMICUM 134-161 DECARBOXYLASE PDCDA.sub.-- PSEAE DIAMINOPIMELATE PSEUDOMONAS AERUGINOSA 57-84 DECARBOXYLASE PDCEB.sub.-- ECOLI GLUTAMATE DECARBOXY- ESCHERICHIA COLI 4-31 LASE BETA PDCHS.sub.-- ENTAE HISTIDINE DECARBOXYLASE ENTEROBACTER AEROGENES 111-138 PDCHS.sub.-- KLEPL HISTIDINE DECARBOXYLASE KLEBSIELLA PLANTICOLA 111-138 PDCHS.sub.-- MORMO HISTIDINE DECARBOXYLASE MORGANELA MORGANII 111-138 PDCID.sub.-- BACSU DIPEPTIDE TRANSPORT BACILLUS SUBTILIS 188-222 PROTEIN DCIAD PDCLY.sub.-- HAFAL LYSINE DECARBOXYLASE HAFNIA ALVEI 305-332 PDCOA.sub.-- KLEPN OXALOACETATE DECARB- KLEBSIELLA PNEUMONIAE 261-288 342-369 OXYLASE ALPHA CHAIN PDCOA.sub.-- SALTY OXALOACETATE DECARB- SALMONELLA TYPHIMURIUM 261-288 342-369 OXYLASE ALPHA CHAIN PDCOB.sub.-- SALTY OXALOACETATE DECARB- SALMONELLA TYPHIMURIUM 299-326 OXYLASE BETA CHAIN PDCTB.sub.-- RHILE TRANSPORT SENSOR RHIZOBIUM LEGUMINOSARUM 377-411 PROTEIN DCTB PDCTB.sub.-- RHIME TRANSPORT SENSOR RHIZOBIUM MELILOTI 511-538 PROTEIN DCTB PDEAD.sub.-- ECOLI ATP-DEPENDENT RNA ESCHERICHIA COLI 268-295 518-545 HELICASE DEAD PDEAD.sub.-- KLEPN ATP-DEPENDENT RNA KLEBSIELLA PNEUMONIAE 267-294 519-546 HELICASE DEAD PDEDA.sub.-- ECOLI DEDA PROTEIN ESCHERICHIA COLI 106-133 PDEGS.sub.-- BACSU SENSOR PROTEIN DEGS BACILLUS SUBTILIS 31-70 75-159 292-327 PDEH2.sub.-- MORSP HALOACETATE DEHALO- MORAXELLA SP 144-141 GENASE H-2 PDEOC.sub.-- ECOLI DEOXYRIBOSE-PHOSPHATE ESCHERICHIA COLI 134-161 ALDOLASE PDHAL.sub.-- PSEOL ALDEHYDE DEHYDRO- PSEUDOMONAS OLEOVORANS 6-33 GENASE PDHAS.sub.-- BACSU ASPARTATE-SEMIALDEHYDE BACILLUS SUBTILIS 150-184 DEHYDROGENASE PDHAS.sub.-- CORGL ASPARTATE-SEMIALDEHYDE CORYNEBACTERIUM GLUTMICUM 43-70 312-339 DEHYDROGENASE PDHAS.sub.-- ECOLI ASPARTATE-SEMIALDEHYDE ESCHERICHIA COLI 229-256 DEHYDROGENASE PDHAS.sub.-- VIBCH ASPARTATE-SEMIALDEHYDE VIBRIO CHOLERAE 309-336 DEHYDROGENASE PDHA.sub.-- BACSH ALANINE DEHYDROGENASE BACILLUS SPHAERICUS 149-176 PDHA.sub.-- BACST ALANINE DEHYDROGENASE BACILLUS STEAROTHERMOPHILUS 94-121 PDHE2.sub.-- CLODI NAD-SPECIFIC GLUTAMATE CLOSTRIDIUM DIFFICILE 116-143 DEHYDROGENASE PDHE2.sub.-- PEPAS D-SPECIFIC GLUTAMATE PEPTOSTREPTOCOCCUS 247-274 345-380 DEHYDROGENASE ASACCHAROLYTICUS PDHE3.sub.-- SULSO GLUTAMATE DEHYDRO- SULFOLOBUS SOLFATARICUS 2-36 GENASE PDHE4.sub.-- CORGL NADP-SPECIFIC GLUTAMATE CORYNEBACTERIUM GLUTMICUM 188-215 229-256 DEHYDROGENASE PDHGA.sub.-- ACICA GLUCOSE DEHYDROGENASE- ACINETOBACTER CALCOACETICUS 10-59 190-217 A PDHGB.sub.-- BACME GLUCOSE 1-DEHYDRO- BACILLUS MEGATERIUM 27-57 GENASE B PDHG.sub.-- ECOLI GLUCOSE DEHYDROGENASE ESCHERICHIA COLI 436-463 PDHK1.sub.-- STRVN KETOACYL REDUCASE 1 STREPTOMYCES VIOLACEORUBER 168-195 PDHLE.sub.-- BACST LEUCINE DEHYDROGENASE BACILLUS STEAROTHERMOPHILUS 192-219 PDHLO.sub.-- AGRT4 D-LYSOPINE DEHYDRO- AGROBACTERIUM TUMEFACIENS 317-344 GENASE PDHM1.sub.-- METEX METHANOL DEHYDRO- METHYLOBACTERIUM 153-187 190-224 GENASE SUBUNIT 1 PREC EXTORQUENS PDHM1.sub.-- METOR METHANOL DEHYDRO- METHYLBACTERIUM 153-187 190-224 GENASE SUBUNIT 1 PREC ORGANOPHILUM PDHM1.sub.-- PARDE METHANOL DEHYDRO- PARACOCCUS DENITRIFICANS 195-222 GENASE SUBUNIT 1 PREC PDHNA.sub.-- BACSP NADH DEHYDROGENASE BACILLUS SP 284-314 PDHNA.sub.-- ECOLI NADH DEHYDROGENASE ESCHERICHIA COLI 180-214 PDHOM.sub.-- BACSU HOMOSERINE DEHYDRO- BACILLUS SUBTILIS 73-107 406-433 GENASE PDHOM.sub.-- CORGL HOMOSERINE DEHYDRO- CORYNEBACTERIUM GLUTMICUM 105-132 GENASE PDHPH.sub.-- BACSH PHENYLALANINE DEHYDRO- BACILLUS SPHAERICUS 212-239 GENASE PDHSA.sub.-- ECOLI SUCC DEHYDROGENASE ESCHERICHIA COLI 482-512 FLAVOPROTEIN SUBUNIT PDHSS.sub.-- ANACY SOLUBLE HYDROGENASE 42 ANABAENA CYLINDRICA 86-113 130-168 KD SUBUNIT PDHSS.sub.-- SYNP1 SOLUBLE HYDROGENASE, SYNECHOCOCCUS SP 133-160 SMALL SUBUNIT PDHTM.sub.-- METME TRIMETHYLAMINE METHYLOTROPHUS METHYLO- 439-466 DEHYDROGENASE PHILUS PDING.sub.-- ECOLI PROBABLE ATP-DEPENDENT ESCHERICHIA COLI 584-611 HELICASE DING PDIVB.sub.-- BACSU DIVISION INITIATION BACILLUS SUBTILIS 54-82 144-141 PROTEIN PDLD3.sub.-- PSEPU DIHYDROLIPOAMIDE PSEUDOMONAS PUTIDA 93-120 DEHYDROGENASE PDLDH.sub.-- AZOVI LIPOAMIDE DEHYDRO- AZOTOBACTER VINELANDII 18-45 224-276 GENASE COMP (EJ) PDLDH.sub.-- BACST LIPOAMIDE DEHYDRO- BACILLUS STEAROTHERMOPHILUS 82-124 GENASE COMP (EJ) PDLDH.sub.-- BACSU LIPOAMIDE DEHYDRO- BACILLUS SUBTILIS 82-109 GENASE COMP (EJ) PDLDH.sub.-- ECOLI DIHYDROLIPOAMIDE ESCHERICHIA COLI 108-135 DEHYDROGENASE PDLDH.sub.-- PSEFL DIHYDROLIPOAMIDE PSEUDOMONAS FLUORESCENS 124-151 223-275 DEHYDROGENASE PDMPN.sub.-- PSEPU PHENOL HYDROXYLASE PJ PSEUDOMONAS PUTIDA 63-90 PROTEIN PDNA1.sub.-- BACSU DNAK PROTEIN BACILLUS SUBTILIS 497-524 548-581 PDNA2.sub.-- BASCU DNAK PROTEIN BACILLUS SUBTILIS 456-483 PDNAA.sub.-- BACSU DNAA PROTEIN BACILLUS SUBTILIS 316-380 PDNAA.sub.-- BORBU DNAA PROTEIN BORRELIA BURGDORFERI 182-216 248-275 341-387 436-463 PDNAA.sub. -- BUCAP DNAA PROTEIN BUCHNERA APHIDICOLA 73-100 111-138 353-380 PDNAA.sub.-- ECOLI DNAA PROTEIN ESCHERICHIA COLI 366-400 PDNAA.sub.-- MICLU DNAA PROTEIN MICROCOCCUS LUTEUS 385-415 PDNAA.sub.-- MYCCA DNAA PROTEIN MYCOPLASMA CAPRICOLUM 8-56 75-112 274-310 350-389 PDNAA.sub.-- PROMI DNAA PROTEIN PROTEUS MIRABILIS 365-399 PDNAA.sub.-- PSEPU DNAA PROTEIN PSEUDOMONAS PUTIDA 398-439 PDNAA.sub.-- SPICI DNAA PROTEIN SPIROPLASMA CITRI 45-72 76-110 145-180 PDNAB.sub.-- CHLTR DNAB-LIKE PROTEIN CHLAMYDIA TRACHOMATIS 312-353 PDNAB.sub.-- ECOLI DNAP PROTEIN ESCHERICHIA COLI 82-109 PDNAB.sub.-- SALTY DNAP PROTEIN SALMONELLA TYPHIMURIUM 82-109 PDNAC.sub.-- ECOLI DNAC PROTEIN ESCHERICHIA COLI 146-190 PDNAK.sub.-- BACME DNAK PROTEIN BACILLUS MEGATERIUM 497-524 548-581 PKNAK.sub.-- BORBU DNAK PROTEIN BORRELIA BURGDORFERI 512-594 PDNAK.sub.-- BRUOV DNAK PROTEIN BRUCELLA OVIS 248-275 512-546 PDNAK.sub.-- CAUCR DNAK PROTEIN CAULOBACTER CRESCENTUS 561-588 PDNAK.sub.-- CLOAB DNAK PROTEIN CLOSTRIDIUM ACETOBUTYLICUM 499-526 PDNAK.sub.-- CLOPE DNAK PROTEIN CLOSTRIDIUM PERFRINGENS 496-527 PDNAK.sub.-- METMA DNAK PROTEIN METHANOSARCINA MAZEI 523-550 PDNAK.sub.-- MYCTU DNAK PROTEIN MYCOBACTERIUM TUBERCULOSIS 502-529 PDNAK.sub.-- STRCO DNAK PROTEIN STREPTOMYCES COELICOLOR 45-72 533-572 PDNIR.sub.-- ECOLI REGULATORY PROTEIN DNIR ESCHERICHIA COLI 114-141 PDNLI.sub.-- ZYMMO DNA LIGASE ZYMOMONAS MOBILIS 658-712 PDNRJ.sub.-- STRPE TRANSDUCTION PROTEIN STREPTOMYCES PEUCETIUS 24-51 DNRJ PDOCK.sub.-- SULSO PROBABLE SIGNAL RECOG- SULFOLOBUS SOLFATARICUS 104-172 NITION PARTICLE PROTE PDP3A.sub.-- BACSU DNA POLYMERASE III, BACILLUS SUBTILIS 58-85 417-444 1382-1416 ALPHA CHAIN PDP3A.sub.-- ECOLI DNA POLYMERASE III, ESCHERICHIA COLI 77-104 ALPHA CHAIN PDP3A.sub.-- SACER DNA POLYMERASE III, SACCHAROPOLYSPORA ERYTHRAEA 230-257 ALPHA CHAIN PDPJA.sub.-- SALTY DNA POLYMERASE III, SALMONELLA TYPHIMURIUM 77-104 ALPHA CHAIN PDPJB.sub.-- BACSU DNA POLYMERASE III, BETA BACILLUS SUBTILIS 212-239 CHAIN PDP3B.sub.-- BORBU DNA POLYMERASE III, BETA BORRELIA BURGDORFERI 266-313 CHAIN PDP3B.sub.-- BUCAP DNA POLYMERASE III, BETA BUCHNERA APHIDICOLA 31-62 308-359 CHAIN PDP3B.sub.-- MICLU DNA POLYMERASE III, BETA MICROCOCCUS LUTEUS 191-218 CHAIN PDP3B.sub.-- MYCCA DNA POLYMERASE III, BETA MYCOPLASMA CAPRICOLUM 36-70 CHAIN PDP3B.sub.-- PSEPU DNA POLYMERASE III, BETA PSEUDOMONAS PUTIDA 30-60 CHAIN PDP3B.sub.-- SPICI DNA POLYMERASE III, BETA SPIROPLASMA CITRI 78-112 129-177 273-310 CHAIN PDP3X.sub.-- BACSU DNA POLYMERASE III SUB- BACILLUS SUBTILIS 231-272 UNITS AND GAMMA AND TAU PDPC2.sub.-- ECOLI DNA PRIMASE TRAC-2 ESCHERICHIA COLI 691-743 PDPC4.sub.-- ECOLI DNA PRIMASE TRAC-4 ESCHERICHIA COLI 401-448 PDPND.sub.-- STRPN DPND PROTEIN STREPTOCOCCUS PNEUMONIAE 79-120 PDPO1.sub.-- BACCA DNA POLYMERASE I BACILLUS CALDOTENOX 208-235 PDPO1.sub.-- STRPN DNA POLYMERASE I STREPTOCOCCUS PNEUMONIAE 198-225 398-425 571-598 645-672 PDPO1.sub.-- THEAQ DNA POLYMERASE THERMUS AQUATICUS 196-223 602-629 PDPO1.sub.-- THEFL DNA POLYMERASE THERMUS AQUATICUS 597-628 PDPO2.sub .-- ECOLI DNA POLYMERASE II ESCHERICHIA COLI 569-596 PDPOL.sub.-- PYRFU DNA POLYMERASE PYROCOCCUS FURIOSUS 746-773 PDPOL.sub. -- SULSO DNA POLYMERASE SULFOLOBUS SOLFATARICUS 379-406 436-463 625-659 747-774 PDPOL.sub.-- THELI DNA POLYMERASE THERMOCOCCUS LITORALIS 332-370 551-589 892-926 1004-1031 1153-1194 PDPP.sub.-- LACLA DIPEPTIDYL PEPTIDASE IV LACTOCOCCUS LACTIS 716-753 PDPP.sub.-- LACLC DIPEPTIDYL PEPTIDASE IV LACTOCOCCUS LACTIS 716-753 PDPS.sub.-- ECOLI DNA PROTECTION DURING ESCHERICHIA COLI 4-45 STARVATION PROTEIN PDRN1.sub.-- STREQ DEOXYRIBONUCLEASE STREPTOCOCCUS EQUISIMILIS 33-60 291-318 PRECURSOR PDRRA.sub.-- STRPE DAUNORUBICIN RESISTANCE STREPTOMYCES PEUCETIUS 286-313 ATP-BINDING PROTEI PDYRA.sub.-- STAAU DIHYDROFOLATE STAPHYLOCOCCUS AUREUS 62-89 REDUCTASE TYPE I PE13B.sub.-- BACCI GLUCAN ENDO-1,3-BETA- BACILLUS CIRCULANS 134-161 305-339 424-451 GLUCOSIDASE A1 PREC PEAE.sub.-- ECOLI ATTACHING AND EFFACING ESCHERICHIA COLI 66-100 158-185 525-552 691-725 802-836 871-905 PROTEIN PEBGR.sub.-- ECOLI EBG OPERON REPRESSOR ESCHERICHIA COLI 151-178 PROTEIN PEBR.sub.-- STAAU ETHIDIUM BROMIDE RESIS- STAPHYLOCOCCUS AUREUS 68-98 TANCE PROTEIN PECHH.sub.-- RHOCA ENOYL-COA HYDRATASE RHODOBACTER CAPSULATUS 222-249 HOMOLOG PECPD.sub.-- ECOLI CHAPERONE PROTEIN ECPD ESCHERICHIA COLI 20-47 PRECURSOR PEDD.sub.-- ZYMMO PHOSPHOGLUCONATE ZYMOMONAS MOBILIS 12-39 DEHYDRATASE PEDIN.sub.-- STAAU EPIDERMAL CELL DIF INH STAPHYLOCOCCUS AUREUS 52-79 119-146 PRECURSOR PEF2.sub.-- DESMO ELONGATION FACTOR 2 DESULFUROCOCCUS MOBILIS 427-461 PEF2.sub.-- HALHA ELONGATION FACTOR 2 HALOBACTERIUM HALOBIUM 186-213 PEF2.sub.-- METVA ELONGATION FACTOR 2 METHANOCOCCUS VANNIELII 409-436 PEF2.sub.-- SULAC ELONGATION FACTOR 2 SULFOLOBUS ACIDOCALDARIUS 36-63 145-180 PEF2.sub.-- THEAC ELONGATION FACTOR 2 THERMOPLASMA ACIDOPHILUM 13-40 49-76 220-247 PEFG.sub.-- ANANI ELONGATION FACTOR G ANACYSTIS NIDULANS 332-359 PEFG.sub.-- ECOLI ELONGATION FACTOR G ESCHERICHIA COLI 234-261 PEFG.sub.-- MYCLE ELONGATION FACTOR G MYCOBACTERIUM LEPRAE 211-259 330-357 PEFG.sub.-- SALTY ELONGATION FACTOR G SALMONELLA TYPHIMURIUM 234-261 PEFG.sub.-- SPIPL ELONGATION FACTOR G SPIRULINA PLATENSIS 334-374 481-511 PEFG.sub.-- SYNY3 ELONGATION FACTOR G SYNECHOCYSTIS SP 14-41 PEFT1.sub.-- STRRA ELONGATION FACTOR TU1 STREPTOMYCES RAMOCISSIMUS 221-258 PEFT2.sub.-- STRRA ELONGATION FACTOR TU2 STREPTOMYCES RAMOCISSIMUS 221-258 PEFT3.sub.-- STRRA ELONGATION FACTOR TU3 STREPTOMYCES RAMOCISSIMUS 228-255 PEFTS.sub.-- ECOLI ELONGATION FACTOR EF-TS ESCHERICHIA COLI 101-135 PEFTS.sub.-- SPICI ELONGATION FACTOR EF-TS SPIROPLASMA CITRI 27-54 134-161 PEFTU.sub.-- BACFR ELONGATION FACTOR TU BACTEROIDES FRAGILIS 18-45 229-256 PEFTU.sub.-- BACSU ELONGATION FACTOR TU BACILLUS SUBTILIS 11-45 230-257 PEFTU.sub.-- BURCE ELONGATION FACTOR TU BURKHOLDERIA CEPACIA 26-53 PEFTU.sub.-- CHLTR ELONGATION FACTOR TU CHLAMYDIA TRACHOMATIS 218-245 PEFTU.sub.-- DEISP ELONGATION FACTOR TU DEINONEMA SP 230-257 PEFTU.sub.-- FLESI ELONGATION FACTOR TU FLEXISTIPES SINUSARABICI 221-248 PEFTU.sub.-- HALMA ELONGATION FACTOR TU HALOARCULA MARISMORTUI 4-31 PEFTU.sub.-- MICLU ELONGATION FACTOR TU MICROCOCCUS LUTEUS 221-248 PEFTU.sub.-- MYCHO ELONGATION FACTOR TU MYCOPLASMA HOMINIS 222-249 PEFTU.sub.-- MYCLE ELONGATION FACTOR TU MYCOBACTERIUM LEPRAE 220-257 PEFTU.sub.-- MYCTU ELONGATION FACTOR TU MYCOBACTERIUM TUBERCULOSIS 220-247 PEFTU.sub.-- SHEPU ELONGATION FACTOR TU SHEWANELLA PUTREFACIENS 26-53 PEFTU.sub.-- STROR ELONGATION FACTOR TU STREPTOCOCCUS ORALIS 232-259 PELAS.sub.-- PSEAE PSEUDOLYSIN PRECURSOR P SEUDOMONAS AERUGINOSA 141-168 PELT1.sub.-- ECOLI T-LABILE ENTEROTOXIN A ESCHERICHIA COLI 78-105 CHAIN PRECURSOR PELT3.sub.-- ECOLI T-LABILE ENTEROTOXIN A ESCHERICHIA COLI 79-106 CHAIN PRECURSOR PELTB.sub.-- CLOPE T-LABILE ENTEROTOXIN B CLOSTRIDIUM PERFRINGENS 228-269 CHAIN PRECURSOR PENTD.sub.-- ECOLI ENTEROBACTIN SYNTHETASE ESCHERICHIA COLI 154-188 COMPONENT D PENVM.sub.-- SALTY ENVM PROTEIN SALMONELLA TYPHIMURIUM 34-61 PEPIB.sub.-- STAEP 117 KD MEMBRANE ASSOCI- STAPHYLOCOCCUS EPIDERMIDIS 51-80 125-229 290-325 387-421 857-889 ATED PROTEIN PEPIC.sub.-- STAEP EPIDERMIN BIOSYNTHESIS STAPHYLOCOCCUS EPIDERMIDIS 411-447 PROTEIN EPIC PEPIP.sub.-- STAEP SERINE PROTEASE EPIP STAPHYLOCOCCUS EPIDERMIDIS 7-68 297-324 PRECURSOR PEPIY.sub.-- STAEP HYPOTHETICAL 16.7 KD STAPHYLOCOCCUS EPIDERMIDIS 70-101 PROTEIN IN EPIA 5' REGION PEPIZ.sub.-- STAEP HYPOTHETICAL PROTEIN IN STAPHYLOCOCCUS EPIDERMIDIS 42-100 EPIA 5' REGION PERA.sub.-- ECOLI GTP-BINDING ERA PROTEIN ESCHERICHIA COLI 18-45 PERBS.sub.-- SACER SENSORY TRANSDUCTION SACCHAROPOLYSPORA ERYTHRAEA 209-243 PROTEIN ERYC1 PEREA.sub.-- ECOLI ERYTHROMYCIN ESTERASE ESCHERICHIA COLI 37-64 143-170 TYPE 1 PERY3.sub.-- SACER ERYTHRONOLIDE SYNTHASE, SACCHAROPOLYSPORA ERYTHRAEA 9-36 967-994 1117-1144 MODULES 5 AND 6 PESTA.sub.-- STRSC ESTERASE PRECURSOR STREPTOMYCES SCABIES 128-155 PESTE.sub.-- PSEFL ARYLESTERASE PSEUDOMONAS FLUORESCENS 162-189 PETC1.sub.-- STAAU ENTEROTOXIN TYPE C-1 STAPHYLOCOCCUS AUREUS 76-117 155-206 PRECURSOR PETC2.sub.-- STAAU ENTEROTOXIN TYPE C-2 STAPHYLOCOCCUS AUREUS 76-117 155-206 PRECURSOR PETC3.sub.-- STAAU ENTEROTOXIN TYPE C-3 STAPHYLOCOCCUS AUREUS 76-117 155-206 PRECURSOR PETXA.sub.-- STAAU ENTEROTOXIN TYPE A STAPHYLOCOCCUS AUREUS 26-69 165-192 PRECURSOR PETXB.sub.-- CLOPE EPSILON-TOXIN, TYPE B CLOSTRIDIUM PERFRINGENS 209-236 PRECURSOR PETXB.sub.-- STAAU ENTEROTOXIN TYPE B STAPHYLOCOCCUS AUREUS 64-101 173-207 PRECURSOR PETXD.sub.-- STAAU ENTEROTOXIN TYPE D STAPHYLOCOCCUS AUREUS 153-200 PRECURSOR PETXE.sub.-- STAAU ENTEROTOXIN TYPE E STAPHYLOCOCCUS AUREUS 26-69 88-115 PRECURSOR PEUTC.sub.-- SALTY ENTHANOLAMINE AMMONIA- SALMONELLA TYPHIMURIUM 116-150 LYASE LIGHT CHAIN PEVGA.sub.-- ECOLI PUTATIVE TRANSCRIPTION ESCHERICHIA COLI 62-89 REG EVGA PEVGS.sub.-- ECOLI PUTATIVE SENSOR PROTEIN ESCHERICHIA COLI 45-79 249-276 431-458 526-553 829-856 EVGS PEX5B.sub.-- ECOLI EXODEOXYRIBONUCLEASE V ESCHERICHIA COLI 226-253 PEXBB.sub.-- ECOLI BIOPOLYMER TRANSPORT ESCHERICHIA COLI 80-107 EXBB PROTEIN PEXOA.sub.-- RHIME SUCCINOGLYCAN BIO- RHIZOBIUM MELILOTI 180-207 SYNTHESIS PROTEIN EXOA PEXOA.sub.-- STRPN EXODEOXYRIBONUCLEASE STREPTOCOCCUS PNEUMONIAE 218-254 PEXOF.sub.-- RHIME EXOF PROTEIN RHIZOBIUM MELILOTI 236-270 327-361 PEXOH.sub.-- RHIME SUCCINOGLYCAN BIO- RHIZOBIUM MELILOTI 252-279 SYNTHESIS PROTEIN EXOH PEXOP.sub.-- RHIME SUCCINOGLYCAN BIO- RHIZOBIUM MELILOTI 211-242 272-299 350-391 SYNTHESIS PROTEIN EXOP PFADB.sub.-- ECOLI FATTY OXIDATION COMPLEX ESCHERICHIA COLI 36-63 177-204 ALPHA SUBUNIT PFADL.sub.-- ECOLI FATTY ACID TRANSPORT ESCHERICHIA COLI 220-247 PROTEIN PRECURSOR PFAED.sub.-- ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI 223-257 421-453 507-541 FAED PRECURSOR PFAEF.sub.-- ECOLI K88 MINOR FIMBRIAL SUB- ESCHERICHIA COLI 18-48 UNIT PRECURSOR PFAND.sub.-- ECOLI FAND PROTEIN PRECURSOR ESCHERICHIA COLI 160-194 386-423 596-623 730-757 PFANE.sub.-- ECOLI CHAPERONE PROTEIN FANE ESCHERICHIA COLI 22-58 PRECURSOR PFANG.sub.-- ECOLI FANG PROTEIN PRECURSOR ESCHERICHIA COLI 104-131 PFANH.sub.-- ECOLI FANH PROTEIN PRECURSOR ESCHERICHIA COLI 83-141 PFAOB.sub.-- PSERF FATTY OXIDATION COMPLEX PSEUDOMONAS FRAGI 8-42 295-322 ALPHA SUBUNIT PFDHD.sub.-- WOLSU FDHD PROTEIN WOLINELLA SUCCINOGENES 64-98 PFDHF.sub.-- ECOLI FORMATE DEHYDROGENASE ESCHERICHIA COLI 613-640 PFDH.sub.-- PSESR FORMATE DEHYDROGENASE PSEUDOMONAS SP 49-76 366-393 PFDNG.sub.-- ECOLI FORMATE DEHYDROGENASE ESCHERICHIA COLI 288-315 323-350 696-730 PFECA.sub.-- ECOLI TRANSPORT PROTEIN FECA ESCHERICHIA COLI 531-561 PRECURSOR PFECC.sub.-- ECOLI TRANSPORT PROTEIN 1, ESCHERICHIA COLI 210-237 CYTOSOLIC PFECI.sub.-- ECOLI FECI PROTEIN ESCHERICHIA COLI 131-158 PFEMB.sub.-- STAAU POSSIBLE PROTEIN FEMB STAPHYLOCOCCUS AUREUS 22-56 PFENR.sub.-- SYNP2 FERREDOXIN-NADP SYNECHOCOCCUS SP 4-31 REDUCTASE PFEPC.sub.-- ECOLI FERRIC ENTEROBACTIN ESCHERICHIA COLI 176-203 TRANSPORT PROTEIN FEPC PFEPE.sub.-- ECOLI FERRIC ENTEROBACTIN ESCHERICHIA COLI 182-234 281-308 TRANSPORT PROTEIN FEPE PFEPG.sub.-- ECOLI FERRIC ENTEROBACTIN ESCHERICHIA COLI 128-155 TRANSPORT PROTEIN FEPG PFERH.sub.-- ANASP FERREDOXIN, HETEROCYST ANABAENA SP 2-29 PFERX.sub.-- ANASP FERRODOXIN-LIKE PROTEIN ANABAENA SP 67-94 IN NIF REGION PFHAB.sub.-- BORPE FILAMENTOUS HEMAG- BORDETELLA PERTUSSIS 1128-1158 1359-1386 2063-2114 2841-2868 3051-3085 3167-3194 GLUTININ PFHAC.sub.-- BORPE HAEMOLYSIN-LIKE BORDETELLA PERTUSSIS 342-369 PROTEIN FHAC PRECURSOR PFHLA.sub.-- ECOLI FORMATE HYDROGENLYASE ESCHERICHIA COLI 36-63 350-384 401-428 TRANSACTIVATOR PFHUA.sub.-- ECOLI FERRICHROME-IRON ESCHERICHIA COLI 458-485 RECEPTOR PRECURSOR PFHUB.sub.-- ECOLI PROTEIN FHUB PRECURSOR ESCHERICHIA COLI 227-254 PFHUE.sub.-- ECOLI OUTER-MEMBRANE ESCHERICHIA COLI 587-614 RECEPTOR PFIB.sub.-- SPICI FIBRIL PROTEIN SPIROPLASMA CITRI 161-195 326-367 PFIC.sub.-- ECOLI CELL FILAMENTATION ESCHERICHIA COLI 151-178 PROTEIN FIC PFIC.sub.-- SALTY CELL FILAMENTATION SALMONELLA TYPHIMURIUM 151-178 PROTEIN FIC PFIMC.sub.-- BORPE OUTER MEMBRANE PROTEIN BORDETELLA PERTUSSIS 208-235 540-567 618-645 FIMC PRECURSOR PFIMC.sub.-- ECOLI CHAPERONE PROTEIN FIMC ESCHERICHIA COLI 51-78 PRECURSOR PFIMD.sub.-- ECOLI FIMD PROTEIN PRECURSOR ESCHERICHIA COLI 222-253 458-485 534-561 563-590 PFIME.sub.-- ECOLI TYPE 1 FIMBRIAE REGULA- ESCHERICHIA COLI 165-192 TORY PROTEIN FIME PFIMY.sub.-- SALTY FIMBRIAE Y PROTEIN SALMONELLA TYPHIMURIUM 49-76 PFIMZ.sub.-- ECOLI FIMBRIAE Z PROTEIN ESCHERICHIA COLI 42-69 162-192 196-230 PFIMZ.sub.-- SALTY FIMBRIAE Z PROTEIN SALMONELLA TYPHIMURIUM 175-209 PFINQ.sub.-- ECOLI FINQ PROTEIN ESCHERICHIA COLI 145-172 PFIRA.sub.-- RICRI FIRA PROTEIN RICKETTSIA RICKETTSII 162-189 PFIXC.sub.-- AZOCA FIXC PROTEIN AZORHIZOBIUM CAULINODANS 129-156 PFIXL.sub.-- AZOCA SENSOR PROTEIN FIXL AZORHIZOBIUM CAULINODANS 247-274 PFIXL.sub.-- BRAJA SENSOR PROTEIN FIXL BRADYRHIZOBIUM JAPONICUM 27-54 253-280 PFLA1.sub.-- BORBU FLAGELLAR FILAMENT 41 KD BORRELIA BURGDORFERI 8-35 271-298 CORE PROTEIN PFLA1.sub.-- HALHA FLAGELLIN A1 PRECURSOR HALOBACTERIUM HALOBIUM 63-92 157-184 PFLA1.sub.-- METVO FLAGELLIN B1 PRECURSOR METHANOCOCCUS VOLTAE 28-73 133-160 PFLA2.sub.-- METVO FLAGELLIN B2 PRECURSOR METHANOCOCCUS VOLTAE 28-66 PFLA3.sub.-- HALHA FLAGELLIN B1 PRECURSOR HALOBACTERIUM HALOBIUM 36-63 PFLA3.sub.-- METVO FLAGELLIN B3 PRECURSOR METHANOCOCCUS VOLTAE 35-76 PFLA4.sub.-- HALHA FLAGELLIN B2 PRECURSOR HALOBACTERIUM HALOBIUM 36-90 157-184 PFLA5.sub.-- HALHA FLAGELLIN B3 PRECURSOR HALOBACTERIUM HALOBIUM 36-63 154-181 PFLA6.sub.-- BACSU FLAA LOCUS 22.9 KD BACILLUS SUBTILIS 73-149 155-186 PRECURSOR PFLAA.sub.-- COMCO FLAGELLIN A CAMPYLOBACTER COLI 15-42 144-191 497-535 PFLAA.sub.-- CAMJE FLAGELLIN A CAMPYLOBACTER JEJUNI 220-266 310-337 500-538 PFLAA.sub.-- METVO FLAGELLIN A PRECURSOR METHANOCOCCUS VOLTAE 28-62 PFLAA.sub.-- PSEAE FLAGELLIN PSEUDOMONAS AERUGINOSA 3-41 51-88 97-124 PFLAA.sub.-- RHIME FLAGELLIN RHIZOBIUM MELILOTI 181-219 228-265 360-391 PFLAA.sub.-- SPIAU FLAGELLAR FILAMENT SPIROCHAETA AURANTIA 162-189 PROTEIN PRECURSOR PFLAA.sub.-- TREHY FLAGELLAR FILAMENT TREPONEMA HYODYSENTERIAE 55-89 219-285 PROTEIN PRECURSOR PFLAA.sub.-- TREPA FLAGELLAR FILAMENT TREPONEMA PALLIDUM 243-270 OUTER LAYER PROTEIN PFLAB.sub.-- CAMCO FLAGELLIN B CAMPYLOBACTER COLI 144-191 497-535 PFLAB.sub.-- CAMJE FLAGELLIN B CAMPYLOBACTER JEJUNI 220-266 310-337 500-538 PFLAB.sub.-- RHIME FLAGELLIN RHIZOBIUM MELILOTI 86-113 177-219 228-255 360-391 PFLAV.sub.-- CLOMP FLAVODOXIN CLOSTRIDIUM MP 18-52 PFLAY.sub.-- CAUCR REGULATORY PROTEIN FLAY CAULOBACTER CRESCENTUS 291-318 551-578 PFLA.sub.-- BACSU FLAGELLIN BACILLUS SUBTILIS 102-129 228-255 PFLGG.sub.-- BACSU FLAGELLAR BASAL-BODY BACILLUS SUBTILIS 62-89 ROD PROTEIN FLGG PFLGK.sub.-- SALTY FLAGELLAR HOOK- SALMONELLA TYPHIMURIUM 12-50 333-360 456-540 ASSOCIATED PROTEIN 1 PFLGL.sub.-- ECOLI FLAGELLAR HOOK- ESCHERICHIA COLI 61-105 229-266 ASSOCIATED PROTEIN 3 PFLGL.sub.-- SALTY FLAGELLAR HOOK- SALMONELLA TYPHIMURIUM 61-105 229-266 ASSOCIATED PROTEIN 3 PFLHD.sub.-- ECOLI FLAGELLAR TRANSCRIP- ESCHERICHIA COLI 6-33 TIONAL ACTIVATOR FLHD PFLIA.sub.-- PSEAE FLAGELLAR OPERON RNA PSEUDOMONAS AERUGINOSA 198-232 POL SIGMA FACTOR PFLIC.sub.-- ECOLI FLAGELLIN ESCHERICHIA COLI 3-41 186-213 295-329 431-466 PFLIC.sub.-- SALCH FLAGELLIN SALMONELLA CHOLERAE-SUIS 5-41 54-125 136-198 PFLIC.sub.-- SALMU FLAGELLIN SALMONELLA MUENCHEN 5-41 54-88 136-177 232-259 272-299 376-403 PFLIC.sub.-- SALPA FLAGELLIN SALMONELLA PARATYPHI-A 5-41 54-125 136-184 PFLIC.sub.-- SALRU FLAGELLIN SALMONELLA RUBISLAW 5-41 54-125 136-196 PFLIC.sub.-- SALTY FLAGELLIN SALMONELLA TYPHIMURIUM 5-41 54-125 136-200 PFLIC.sub.-- SERMA FLAGELLIN SERRATIA MARCESCENS 15-52 55-89 103-130 137-164 275-321 PFLID.sub.-- ECOLI FLAGELLAR HOOK- ESCHERICHIA COLI 32-66 106-133 160-187 216-298 386-445 ASSOCIATED PROTEIN 2 PFLID.sub.-- SALTY FLAGELLAR HOOK- SALMONELLA TYPHIMURIUM 32-66 106-133 255-299 407-438 ASSOCIATED PROTEIN 2 PFLIE.sub.-- BACSU FLAG HOOK-BASAL BACILLUS SUBTILIS 8-35 BODY PROTEIN FLIE PFLIF.sub.-- BACSU FLAGELLAR M-RING BACILLUS SUBTILIS 327-361 391-418 PROTEIN PFLIF.sub.-- CAUCR FLAGELLAR M-RING CAULOBACTER CRESCENTUS 24-51 297-324 361-388 PROTEIN PFLIF.sub.-- SALTY FLAGELLAR M-RING SALMONELLA TYPHIMURIUM 484-529 PROTEIN PFLIG.sub.-- BACSU FLAGELLAR SWITCH BACILLUS SUBTILIS 35-62 PROTEIN FLIG PFLIG.sub.-- ECOLI FLAGELLAR SWITCH ESCHERICHIA COLI 44-71 PROTEIN FLIG PFLIH.sub.-- BACSU PROBABLE FLIH PROTEIN BACILLUS SUBTILIS 19-46 105-132 PFLIJ.sub.-- BACSU FLAGELLAR FLIJ PROTEIN BACILLUS SUBTILIS 7-37 PFLIJ.sub.-- SALTY FLAGELLAR FLIJ PROTEIN SALMONELLA TYPHIMURIUM 75-118 PFLIK.sub.-- BACSU PROBABLE FLIK PROTEIN BACILLUS SUBTILIS 77-104 117-144 PFLIL.sub.-- BACSU FLIL PROTEIN BACILLUS SUBTILIS 30-71 78-105 109-136 PFLIL.sub.-- ECOLI FLIL PROTEIN ESCHERICHIA COLI 105-132 PFLIL.sub.-- SALTY FLIL PROTEIN SALMONELLA TYPHIMURIUM 103-133 PFLIM.sub.- - BACSU FILM PROTEIN BACILLUS SUBTILIS 148-175 PFLIM.sub.-- ECOLI FILM PROTEIN ESCHERICHIA COLI 251-278 PFLIN.sub.-- CAUCR FLAGELLAR MOTOR SWITCH CAULOBACTER CRESCENTUS 56-83 PROTEIN PFLIS.sub.-- ECOLI FLAGELLAR PROTEIN FLIS ESCHERICHIA COLI 59-86 PFLIT.sub.-- SALTY FLAGELLAR PROTEIN FLIT SALMONELLA TYPHIMURIUM 9-46 67-106 PFM12.sub.-- PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA 30-67 80-114 PRECURSOR PFM1A.sub.-- ECOLI TYPE-1 FIMBRIAL PROTEIN, ESCHERICHIA COLI 5-32 A CHAIN PRECURSOR PFM1C.sub.-- ECOLI TYPE-1 FIMBRIAL PROTEIN, ESCHERICHIA COLI 11-38 C CHAIN PRECURSOR PFM1.sub.-- ACTVI FIMBRIAL SUBUNIT TYPE 1 ACTINOMYCES VISCOSUS 248-282 352-379 417-444 PRECURSOR PFM98.sub.-- ECOLI FIMBRIAL PROTEIN 987P ESCHERICHIA COLI 114-141 PRECURSOR PFMA0.sub.-- BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS 110-137 PRECURSOR PFMA1.sub.-- BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS 107-134 PRECURSOR PFMA2.sub.-- BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS 107-134 PRECURSOR PFMA7.sub.-- BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS 110-137 PRECURSOR PFMAA.sub.-- BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS 123-150 PRECURSOR PFMAF.sub.-- BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS 107-141 PRECURSOR PFMAH.sub.-- BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS 95-122 PRECURSOR PFMAI.sub.-- BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS 111-145 PRECURSOR PFMAJ.sub.-- BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS 96-123 PRECURSOR PFMCD.sub.-- PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA 70-97 PRECURSOR PFMDD.sub.-- BACNO POSSIBLE FIMBRIAL BACTEROIDES NODOSUS 106-144 355-382 ASSEMBLY PROTEIN FIMD PFMDH.sub.-- BACNO POSSIBLE FIMBRIAL BACTEROIDES NODOSUS 106-144 355-382 ASSEMBLY PROTEIN FIMD PFMF3.sub.-- ECOLI F17 FIMBRIAL PROTEIN ESCHERICHIA COLI 97-124 PRECURSOR PFMM1.sub.-- NEIME FIMBRIAL PROTEIN NEISSERIA MENINGITIDIS 70-97 PRECURSOR PFMM2.sub.-- NEIGO FIMBRIAL PROTEIN NEISSERIA GONORRHOEAE 66-97 PRECURSOR PFMM.sub.-- MORNO FIMBRIAL PROTEIN MORAXELLA NONLIQUEFACIENS 108-146 PRECURSOR PFMP1.sub.-- PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA 30-67 80-114 PRECURSOR PFMP3.sub.-- PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA 70-97 PRECURSOR PFMS1.sub.-- ECOLI CS1 FIMBRIAL SUBUNIT A ESCHERICHIA COLI 60-87 112-139 PRECURSOR PFMS3.sub.-- ECOLI CS3 FIMBRIAL SUBUNIT A ESCHERICHIA COLI 49-98 PRECURSOR PFM.sub.-- HAEIN MAJOR FIMBRIAL SUBUNIT HAEMOPHILUS INFLUENZAE 102-129 PRECURSOR PFNBA.sub.-- STAAU FIBRONECTIN-BINDING STAPHYLOCOCCUS AUREUS 41-83 188-215 311-365 431-458 517-555 652-686 722-756 PROTEIN PRECURSOR PFOLC.sub.-- ECOLI FOLYPOLYGLUTAMATE ESCHERICHIA COLI 125-159 SYNTHASE PFOLC.sub.-- LACCA FOLYPOLYGLUTAMATE LACTOBACILLUS CASEI 129-156 SYNTHASE PFPG.sub.-- BACFI FORMAMIDOPYRIMIDINE- BACILLUS FIRMUS 153-180 DNA GLYCOSYLASE PFRDA.sub.-- ECOLI FUMARATE REDUCTASE ESCHERICHIA COLI 395-422 FLAVOPROTEIN SUBUNIT PFRDA.sub.-- WOLSU FUMARATE REDUCTASE WOLINELLA SUCCINOGENES 8-35 487-514 FLAVOPROTEIN SUBUNIT PFRZE.sub.-- MYXXA GLIDING MOTILITY REGULA- MYXOCOCCUS XANTHUS 15-42 478-505 TORY PROTEIN PFTHS.sub.-- CLOTH FORMATE--TETRAHYDRO- CLOSTRIDIUM THERMOACETUM 163-190 FOLATE LIGASE PFTR.sub.-- METTH FORMYLTRANSFERASE METHANOBACTERIUM 9-43 THERMOAUTOTROPHICU PFTSA.sub.-- BACSU CELL DIVISION PROTEIN BACILLUS SUBTILIS 76-110 FTSA PFTSA.sub.-- ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI 301-338 375-418 FTSA PFTSJ.sub.-- ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI 301-338 4-31 FTSJ PFTSL.sub.-- ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI 63-90 FTSL PFTSN.sub.-- ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI 151-188 FTSN PFTSX.sub.-- ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI 278-305 FTSX PFTSY.sub.-- ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI 230-260 FTSY PFUCR.sub.-- ECOLI L-FUCOSE OPERON ESCHERICHIA COLI 7-45 ACTIVATOR PFUMA.sub.-- BACST FUMARATE HYDRATASE BACILLUS STEAROTHERMOPHILUS 290-317 CLASS I, AEROBIC PFUMH.sub.-- BACSU FUMARATE HYDRATASE BACILLUS SUBTILIS 414-445 PFUR.sub.-- YERPE FERRIC UPTAKE REGULA- YERSINIA PESTIS 99-130 TION PROTEIN PG3P1.sub.-- ECOLI GLYC 3-PHOS DEHYDRO- ESCHERICHIA COLI 302-329 GENASE A PG3P2.sub.-- ANAVA GLYC 3-PHOS DEHYDRO- ANABAENA VARIABILIS 87-114 GENASE 2 PG3P3.sub.-- ANAVA GLYC 3-PHOS DEHYDRO- ANABAENA VARIABILIS 162-189 GENASE 3 PG3P3.sub.-- ECOLI GLYC 3-PHOS DEHYDRO- ESCHERICHIA COLI 236-324 GENASE C PG3P.sub.-- BACME GLYC 3-PHOS DEHYDRO- BACILLUS MEGATERIUM 49-76 237-271 GENASE PG3P.sub.-- BACSU GLYC 3-PHOS DEHYDRO- BACILLUS SUBTILIS 49-76 GENASE PG3P.sub.-- PYRWO GLYC 3-PHOS DEHYDRO- PYROCOCCUS WOESEI 259-286 GENASE PG3P.sub.-- THEMA GLYC 3-PHOS DEHYDRO- THERMOTOGA MARITIMA 290-328 GENASE PG6PB.sub.-- BACST GLUCOSE-6-PHOSPHATE BACILLUS STEAROTHERMOPHILUS 103-143 241-268 ISOMERASE B PG6PD.sub.-- ECOLI GLUCOSE-6-PHOSPHATE ESCHERICHIA COLI 301-328 1-DEHYDROGENASE PG6PD.sub.-- ZYMMO GLUCOSE-6-PHOSPHATE DESULFUROCOCCUS MOBILIS 165-192 1-DEHYDROGENASE PGACA.sub.-- PSEFL CYANIDE CONTROL PROTEIN PSEUDOMONAS FLUORESCENS 178-205 PGAL1.sub.-- SALTY GALACTOKINASE SALMONELLA TYPHIMURIUM 86-113 PGAL7.sub.-- HAEIN GAL-1-PHOS URIDYLYL- HAEMOPHILUS INFLUENZAE 124-158 239-269 TRANSFERASE PGAL7.sub.-- LACHE GAL-1-PHOS URIDYLYL- LACTOBACILLUS HELVETICUS 304-338 TRANSFERASE PGALF.sub.-- SALTY GALACTOSE OPERON SALMONELLA TYPHIMURIUM 53-91 REPRESSOR PGALR.sub.-- HAEIN GALACTOSE OPERON HAEMOPHILUS INFLUENZAE 182-209 REPRESSOR PGAL.sub.-- PSEFL DE D-GALACTOSE 1- PSEUDOMONAS FLUORESCENS 251-278 DEHYDROGENASE PGCH2.sub.-- ECOLI GTP CYCLOHYDROLASE II ESCHERICHIA COLI 78-105 PGCH2.sub.-- PHOLE GTP CYCLOHYDROLASE II PHOTOBACTERIUM LEIOGNATHI 197-227 246-273 PGCSH.sub. -- ECOLI GLYCINE CLEAVAGE SYSTEM ESCHERICHIA COLI 10-37 H PROTEIN PGCSP.sub.-- ECOLI GLYCINE DEHYDROGENASE ESCHERICHIA COLI 216-246 PGCVA.sub.-- ECOLI GLYCINE CLEAVAGE SYSTEM ESCHERICHIA COLI 61-94 TRANSACTIVATOR PGENK.sub.-- ECOLI PROTEIN K ESCHERICHIA COLI 24-51 PGER1.sub.-- BACSU SPORE GERMINATION BACILLUS SUBTILIS 49-83 182-216 350-384 PROTEIN I PGER3.sub.-- BACSU SPORE GERMINATION BACILLUS SUBTILIS 293-323 PROTEIN III PRECURSOR PGERE.sub.-- BACSU GERMINATION PROTEIN BACILLUS SUBTILIS 13-40 GERE PGGI2.sub.-- STAHA ANTIBACTERIAL PROTEIN 2 STAPHYLOCOCCUS HAEMO- 6-33 LYTICUS PGGI3.sub.-- STAHA ANTIBACTERIAL PROTEIN 3 STAPHYLOCOCCUS HAEMO- 6-33 LYTICUS PGIDA.sub.-- BACSU GLUCOSE INHIBITED BACILLUS SUBTILIS 396-423 DIVISION PROTEIN A PGIDA.sub.-- ECOLI GLUCOSE INHIBITED ESCHERICHIA COLI 533-568 DIVISION PROTEIN A PGIDA.sub.-- PSEPU GLUCOSE INHIBITED PSEUDOMONAS PUTIDA 539-566 DIVISION PROTEIN A PGIDB.sub.-- BACSU GLUCOSE INHIBITED BACILLUS SUBTILIS 34-61 DIVISION PROTEIN B PGIDB.sub.-- PSEPU GLUCOSE INHIBITED PSEUDOMONAS PUTIDA 25-52 DIVISION PROTEIN B PGLCP.sub.-- SYNY3 GLUCOSE TRANSPORT SYNECHOCYSTIS SP 288-322 PROTEIN PGLDA.sub.-- BACST GLYCEROL DEHYDRO- BACILLUS STEAROTHERMOPHILUS 20-79 GENASE PGLGA.sub.-- ECOLI GLYCOGEN SYNTHASE ESCHERICHIA COLI 256-283 PGLGC.sub.-- ECOLI GLUCOSE-1-PHOSPHATE ESCHERICHIA COLI 114-141 ADENYLYLTRANSFERASE PGLGC.sub.-- SALTY GLUCOSE-1-PHOSPHATE SALMONELLA TYPHIMURIUM 114-141 ADENYLYLTRANSFERASE PGLMS.sub.-- ECOLI GLUC--FRUC-6-PHOSAMINO- ESCHERICHIA COLI 209-243 TRANSFERASE PGLN1.sub.-- METTL GLNB-LIKE PROTEIN 1 METHANOCOCCUS 58-85 THERMOLITHOTROPHICUS PGLNA.sub.-- ANASP GLUTAMINE SYNTHETASE ANABAENA SP 8-42 PGLNA.sub.-- BACSU GLUTAMINE SYNTHETASE BACILLUS SUBTILIS 4-31 PGLNA.sub .-- CLOAB GLUTAMINE SYNTHETASE CLOSTRIDIUM ACETOBUTYLICUM 413-440 PGLNA.sub.-- ECOLI GLUTAMINE SYNTHETASE ESCHERICHIA COLI 144-171 PGLNA.sub.-- METVO GLUTAMINE SYNTHETASE METHANOCOCCUS VOLTAE 203-230 PGLNA.sub.-- PROVU GLUTAMINE SYNTHETASE PROTEUS VOLGARIS 142-169 PGLNA.sub.-- PYRFU GLUTAMINE SYNTHETASE PYROCOCCUS FURIOSUS 391-421 PGLNA.sub.-- SALTY GLUTAMINE SYNTHETASE SALMONELLA TYPHIMURIUM 144-171 PGLNA.sub.-- STRCO GLUTAMINE SYNTHETASE STREPTOMYCES COELICOLOR 186-213 PGLNB.sub.-- AZOBR NITROGEN REGULATORY AZOSPIRILLUM BRASILENSE 15-49 PROTEIN P-II PGLNB.sub.-- RHOCA NITROGEN REGULATORY RHODOBACTER CAPSULATUS 15-49 PROTEIN P-II PGLNB.sub.-- SYNP6 NITROGEN REGULATORY SYNECHOCOCCUS SP 52-79 PROTEIN P-II PGLND.sub.-- ECOLI UDP URIDYLYLTRANSFERASE ESCHERICHIA COLI 120-147 151-178 PGLND.sub.-- SALTY UDP URIDYLYLTRANSFERASE SALMONELLA TYPHIMURIUM 151-178 PGLNE.sub.-- ECOLI ADENYLYLTRANSFERASE ESCHERICHIA COLI 103-130 433-460 763-790 PGLNH.sub.-- ECOLI GLUTAMINE-BINDING ESCHERICHIA COLI 126-153 PROTEIN PRECURSOR PGLNQ.sub.-- BACST GLUTAMINE PERMEASE BACILLUS STEAROTHERMOPHILUS 7-34 OPERON PROTEIN GLNQ PGLPD.sub.-- BACSU AEROBIC GLYC-3-PHOS BACILLUS SUBTILIS 194-230 DEHYDROGENASE PGLPD.sub.-- ECOLI AEROBIC GLYC-3-PHOS ESCHERICHIA COLI 410-437 DEHYDROGENASE PGLPF.sub.-- BACSU GLYCEROL UPTAKE FACILI- BACILLUS SUBTILIS 235-274 TATOR PROTEIN PGLPK.sub.-- BACSU GLYCEROL KINASE BACILLUS SUBTILIS 44-93 PGLPK.sub.-- ECOLI GLYCEROL KINASE ESCHERICHIA COLI 56-90 PGLPR.sub.-- ECOLI GLYCEROL-3-PHOSPHATE ESCHERICHIA COLI 5-32 REGULON REPRESSOR PGLPX.sub.-- ECOLI GLPX PROTEIN ESCHERICHIA COLI 297-324 PGLPX.sub.-- SHIFL GLPX PROTEIN SHIGELLA FLEXNERI 297-324 PGLRX.sub.-- ECOLI GLUTAREDOXIN ESCHERICHIA COLI 24-51 PGLTB.sub.-- ECOLI GLUTAMATE SYNTHASE ESCHERICHIA COLI 482-509 PGLTP.sub.-- ECOLI PROTON GLUTAMATE ESCHERICHIA COLI 319-346 SYMPORT PROTEIN PGLVB.sub.-- ECOLI PHOSPHOTRANSFERASE ESCHERICHIA COLI 130-157 ENZYME TYPE-IIB PGLYA.sub.-- BRAJA SERINE HYDROXYMETHYL- BRADYRHIZOBIUM JAPONICUM 29-60 TRANSFERASE PGLYA.sub.-- CAMJE SERINE HYDROXYMETHYL- CAMPYLOBACTER JEJUNI 376-403 TRANSFERASE PGLYA.sub.-- HYPME SERINE HYDROXYMETHYL- HYPHOMICROBIUM METHYL- 28-55 TRANSFERASE OVORUM PGMG7.sub.-- BACSU COMG OPERON PROTEIN 7 BACILLUS SUBTILIS 37-67 88-122 PGNTK.sub.-- BACSU GLUCONOKINASE BACILLUS SUBTILIS 238-271 PGP1D.sub.-- CHLTR VIRULENCE PROTEIN PGP1-D CHLAMYDIA TRACHOMATIS 312-353 PGP2D.sub.-- CHLTR VIRULENCE PROTEIN PGP2-D CHLAMYDIA TRACHOMATIS 97-131 PGP5D.sub.-- CHLTR VIRULENCE PROTEIN PGP5-D CHLAMYDIA TRACHOMATIS 25-52 PGP6D.sub.-- CHLTR VIRULENCE PROTEIN PGP6-D CHLAMYDIA TRACHOMATIS 63-106 193-220 PGP7D.sub.-- CHLTR VIRULENCE PROTEIN PGP7-D CHLAMYDIA TRACHOMATIS 12-60 PGP8D.sub.-- CHLTR VIRULENCE PROTEIN PGP8-D CHLAMYDIA TRACHOMATIS 94-121 PGREA.sub.-- RICPR TRANSCRIPTION ELONGA- RICKETTSIA PROWAZEKII 15-49 TION FACTOR GREA PGRPE.sub.-- BACSU GRPE-LIKE PROTEIN BACILLUS SUBTILIS 27-73 PGRPE.sub.-- BORBU GRPE-LIKE PROTEIN BORRELIA BURGDORFERI 2-79 PGRPE.sub.-- CLOAB GRPE-LIKE PROTEIN CLOSTRIDIUM ACETOBUTYLICUM 12-83 PGRSA.sub.-- BACBR GRAMICIDIN S SYNTHETASE BACILLUS BREVIS 545-572 799-826 840-882 1035-1062 PGRSB.sub.-- BACBR GRAMICIDIN S SYNTHETASE BACILLUS BREVIS 48-75 94-121 241-282 1126-1153 1213-1240 2162-2189 2559-2586 2819-2846 3606-3633 II PGSH1.sub.-- ECOLI GLUTAMATE-CYSTEINE ESCHERICHIA COLI 239-266 274-301 LIGASE PGSHR.sub.-- ECOLI GLUTATHIONE REDUCTASE ESCHERICHIA COLI 100-134 270-311 PGSHR.sub.-- PSEAE GLUTATHIONE REDUCTASE PSEUDOMONAS AERUGINOSA 80-114 PGSIA.sub.-- BACSU STARVATION-INDUCIBLE BACILLUS SUBTILIS 74-101 265-296 PROTEIN A PGSPD.sub.-- ERWCA PROTEIN D PRECURSOR ERWINIA CAROTOVORA 258-285 516-543 589-619 PGSPD.sub.-- ERWCH PROTEIN D PRECURSOR ERWINIA CHRYSANTHEMI 259-302 307-338 551-578 659-686 PGSPD.sub.-- KLEPN PROTEIN D PRECURSOR KLEBSIELLA PNEUMONIAE 259-286 PGSPE.sub.-- ERWCA PROTEIN E ERWINIA CAROTOVORA 329-367 PGSPE.sub.-- ERWCH PROTEIN E ERWINIA CHRYSANTHEMI 329-367 PGSPE.sub.-- KLEPN PROTEIN E KLEBSIELLA PNEUMONIAE 323-361 PGSPE.sub.-- PSEAE PROTEIN E PSEUDOMONAS AERUGINOSA 122-149 331-369 PGSPF.sub.-- XANCP PROTEIN F XANTHOMONAS CAMPESTRIS 230-257 PGSPH.sub.-- PSEAE PROTEIN H PRECURSOR PSEUDOMONAS AERUGINOSA 18-59 PGSPI.sub.-- AERHY PROTEIN I PRECURSOR AEROMONAS HYDROPHILA 27-61 PGSPI.sub.-- ERWCA PROTEIN I PRECURSOR ERWINIA CAROTOVORA 35-62 PGSPJ.sub.-- KLEPN PROTEIN J PRECURSOR KLEBSIELLA PNEUMONIAE 140-167 PGSPK.sub.-- ERWCA PROTEIN K ERWINIA CAROTOVORA 28-55 PGSPK.sub.-- ERWCH PROTEIN K ERWINIA CHRYSANTHEMI 28-55 PGSPK.sub.-- KLEPN PROTEIN K KLEBSIELLA PNEUMONIAE 72-99 PGSPK.sub.-- PSEAE PROTEIN K PSEUDOMONAS AERUGINOSA 262-289 PGSPL.sub.-- ERWCH PROTEIN L ERWINIA CHRYSANTHEMI 7-42 248-286 331-358 PGSPL.sub.-- XANCP PROTEIN L XANTHOMONAS CAMPESTRIS 39-73 297-324 PGSPM.sub.-- ERWCA PROTEIN M ERWINIA CAROTOVORA 108-145 PGSQD.sub.-- ERWCH PROTEIN D PRECURSOR ERWINIA CHRYSANTHEMI 259-302 448-475 546-573 657-684 PGTF1.sub.-- STRDO GLUCOSYLTRANSFERASE-I STREPTOCOCCUS DOWNEI 42-69 177-204 212-239 464-491 1382-1416 1495-1529 PRECURSOR PGTF2.sub.-- STRDO GLUCOSYLTRANSFERASE-I STREPTOCOCCUS DOWNEI 171-198 206-233 458-485 1382-1412 1497-1524 PRECURSOR PGTFA.sub.-- STRMU GLUCOSYLTRANSFERASE-S STREPTOCOCCUS MUTANS 297-350 PGTFB.sub.-- STRMU GLUCOSYLTRANSFERASE-I STREPTOCOCCUS MUTANS 42-93 110-137 161-188 199-246 313-347 592-627 PRECURSOR PGTFC.sub.-- STRMU GLUCOSYLTRANSFERASE-SI STREPTOCOCCUS MUTANS 4-40 110-138 235-262 330-361 614-653 PRECURSOR PGTFS.sub.-- STRDO GLUCOSYLTRANSFERASE-S STREPTOCOCCUS DOWNEI 275-316 436-463 1281-1315 PRECURSOR PGTMR.sub.-- METTF POSSIBLE G-T MISMATCHES METHANOBACTERIUM 80-107 148-175 REPAIR ENZYME THERMOFORMICICUM PGUAA.sub.-- BACSU GMP SYNTHASE BACILLUS SUBTILIS 314-348 399-436 478-505 PGUAA.sub.-- ECOLI GMP SYNTHASE ESCHERICHIA COLI 105-132 PGUB.sub.-- BACCI BETA-GLUCANASE BACILLUS CIRCULANS 164-191 PRECURSOR PGUB.sub.-- BACLI BETA-GLUCANASE BACILLUS LICHENIFORMIS 132-166 PRECURSOR PGUB.sub.-- BACMA BETA-GLUCANASE BACILLUS MACERANS 126-160 PRECURSOR PGUN1.sub.-- BACS4 ENDOGLUCANASE A BACILLUS SP 18-49 PGUN1.sub.-- BACSU ENDOGLUCANASE BACILLUS SUBTILIS 270-304 376-403 PRECURSOR PGUN1.sub.-- BUTFI ENDOGLUCANASE 1 BUTYRIVIBRIO FIBRISOLVENS 154-181 452-495 PGUN2.sub.-- BACSU ENDOGLUCANASE BACILLUS SUBTILIS 270-304 PRECURSOR PGUN2.sub.-- THEFU ENDOGLUCANASE E-2 THERMOMONOSPORA FUSCA 201-228 PRECURSOR PGUN3.sub.-- BACS4 ENDOGLUCANASE C BACILLUS SP 110-137 348-378 538-565 PRECURSOR PGUN3.sub.-- BACSU ENDOGLUCANASE BACILLUS SUBTILIS 270-304 PRECURSOR PGUN3.sub.-- FIBSU ENDOGLUCANASE 3 FIBROBACTER SUCCINOGENES 542-586 PRECURSOR PGUN4.sub.-- THEFU ENDOGLUCANASE E-4 THERMOMONOSPORA FUSCA 308-342 PRECURSOR PGUN5.sub.-- THEFU ENDOGLUCANASE E-5 THERMOMONOSPORA FUSCA 44-71 PRECURSOR FGUNA.sub.-- BACLA ENDOGLUCANASE A BACILLUS LAUTUS 410-437 454-481 PRECURSOR PGUNA.sub.-- CLOTM ENDOGLUCANASE A CLOSTRIDIUM THERMOCELLUM 354-384 PRECURSOR PGUNA.sub.-- PSEFL ENDOGLUCANASE A PSEUDOMONAS FLUORESCENS 762-789 PRECURSOR PGUNA.sub.-- RUMAL ENDOGLUCANASE A RUMINOCOCCUS ALBUS 294-321 PGUNA.sub.-- RUMFL CELLODEXTRINASE A RUMINOCOCCUS FLAVEFACIENS 276-303 PGUNB.sub.-- BACLA ENDOGLUCANASE B BACILLUS LAUTUS 375-450 PRECURSOR PGUNB.sub.-- CALSA ENDOGLUCANASE B CALDOCELLUM SACCHAROLYTI- 151-182 444-478 CUM PGUNB.sub.-- CELFI ENDOGLUCANASE B CELLULOMONAS FIMI 266-293 PRECURSOR PGUNB.sub.-- CLOCL ENDOGLUCANASE B CLOSTRIDIUM CELLULOVORANS 144-171 266-300 PRECURSOR PGUNB.sub.-- CLOTM ENDOGLUCANASE B CLOSTRIDIUM THERMOCELLUM 514-541 PRECURSOR PGUNC.sub.-- CELFI ENDOGLUCANASE C CELLULOMONAS FIMI 881-908 PRECURSOR PGUNC.sub.-- PSEFL ENDOGLUCANASE C PSEUDOMONAS FLUORESCENS 52-82 PRECURSOR PGUND.sub.-- CLOCE ENDOGLUCANASE D CLOSTRIDIUM CELLULOLYTICUM 382-453 PRECURSOR PGUND.sub.-- CLOCL ENDOGLUCANASE D CLOSTRIDIUM CELLULOLYTICUM 145-172 271-298 PRECURSOR PGUNE.sub.-- CLOTM ENDOGLUCANASE E CLOSTRIDIUM THERMOCELLUM 158-185 207-234 284-311 PRECURSOR PGUNH.sub.-- CLOTM ENDOGLUCANASE H CLOSTRIDIUM THERMOCELLUM 46-73 425-452 PRECURSOR PGUNS.sub.-- ERWCA ENDOGLUCANASE ERWINIA CAROTOVORA 20-47 115-149 PRECURSOR PGUNX.sub.-- CLOTM PUTATIVE ENDOGLUCANASE CLOSTRIDIUM THERMOCELLUM 105-139 X PGUNZ.sub.-- CLOSR ENDOGLUCANASE Z CLOSTRIDIUM STERCORARIUM 296-326 522-549 PRECURSOR PGUN.sub.-- BACPO ENDOGLUCANASE BACILLUS POLYMYXA 198-225 PGUN.sub.-- BACS1 ENDOGLUCANASE BACILLUS SP 321-348 PRECURSOR PGUN.sub.-- BACS6 ENDOGLUCANASE BACILLUS SP 198-229 501-528 623-664 PRECURSOR PGUTD.sub.-- ECOLI SORBITOL-4-PHOSPHATE 2- ESCHERICHIA COLI 138-165 DEHYDROGENASE PGVP1.sub.-- HALHA GAS VESICLE PROTEIN, HALOBACTERIUM HALOBIUM 36-63 PLASMID PGVP2.sub.-- HALHA GAS VESTILE PROTEIN, HALOBACTERIUM HALOBIUM 36-63 CHROMOSOMAL PGVPA.sub.-- APHFL GAS VESICLE PROTEIN APHANIZOMENON FLOS-AQUAE 4--31 39-66 PGVPA.sub.-- FREDI GAS VESICLE PROTEIN FREMYELLA DIPLOSIPHON 4--31 39-66 PGVPA.sub.-- HALME GAS VESICLE PROTEIN HALOBACTERIUM MEDITERRANEI 37-64 PGVPA.sub.-- MICBC GAS VESICLE PROTEIN MICROCYSTIS SP 39-66 PGVPA.sub.-- PSEAN GAS VESICLE PROTEIN PSEUDONANABAENA SP 4-31 39-66 PGVPC.sub.- - APHFL GAS VESICLE PROTEIN C APHANIZOMENON FLOS-AQUAE 8-49 PGVPC.sub.-- HALHA GAS VESICLE PROTEIN C HALOBACTERIUM HALOBIUM 150-249 PGVPC.sub.-- HALME GAS VESICLE PROTEIN C HALOBACTERIUM MEDITERRANEI 139-169 PGVPD.sub.-- HALHA GVPD PROTEIN, PLASMID HALOBACTERIUM HALOBIUM 110-147 PGVPD.sub.-- HALME GVPD PROTEIN HALOBACTERIUM MEDITERRANEI 110-147 PGVPF.sub.-- HALHA GVPF PROTEIN, PLASMID HALOBACTERIUM HALOBIUM 13-47 135-169 PGVPF.sub.-- HALME GVPF PROTEIN HALOBACTERIUM MEDITERRANEI 13-47 PGVPF.sub.-- HALSA GVPF PROTEIN HALOBACTERIUM SALINARIUM 8-49 PGVPF.sub.-- HALHA GVPG PROTEIN, PLASMID HALOBACTERIUM HALOBIUM 38-65 PGVPG.sub.-- HALME GVPG PROTEIN HALOBACTERIUM MEDITERRANEI 38-72 PGVPH.sub.-- HALHA GVPH PROTEIN HALOBACTERIUM HALOBIUM 10-40 PGVPI.sub.-- HALME GVPI PROTEIN HALOBACTERIUM MEDITERRANEI 5-32 PGVPK.sub.-- HALHA GVPK PROTEIN HALOBACTERIUM HALOBIUM 45-76 PGVPK.sub.-- HALME GVPK PROTEIN HALOBACTERIUM MEDITERRANEI 12-39 47-74 PGVPK.sub.-- HALSA GVPK PROTEIN HALOBACTERIUM SALINARIUM 11-38 50-77 PGVPL.sub.-- HALME GVPL PROTEIN HALOBACTERIUM MEDITERRANEI 44-78 PGVPN.sub.-- HALHA GVPN PROTEIN HALOBACTERIUM HALOBIUM 113-140 PGVPN.sub.-- HALME GVPN PROTEIN HALOBACTERIUM MEDITERRANEI 15-56 PGVPG.sub.-- HALME GVPG PROTEIN HALOBACTERIUM MEDITERRANEI 69-96 105-132 PGYRA.sub.-- BACSU DNA GYRASE SUBUNIT A BACILLUS SUBTILIS 380-407 429-499 PGYRA.sub.-- CAMJE DNA GYRASE SUBUNIT A CAMPYLOBACTER JEJUNI 267-310 381-408 452-479 665-695 PGYRA.sub.-- ECOLI DNA GYRASE SUBUNIT A ESCHERICHIA COLI 266-293 449-497 PGYRA.sub.-- KLEPN DNA GYRASE SUBUNIT A KLEBSIELLA PNEUMONIAE 266-293 448-496 518-545 PGYRA.sub.-- MYCPN DNA GYRASE SUBUNIT A MYCOPLASMA PNEUMONIAE 4-31 PGYRA.sub.-- STAAU DNA GYRASE SUBUNIT A STAPHYLOCOCCUS AUREUS 129-156 346-373 430-479 647-674 812-839 PGYRB.sub.-- BACSU DNA GYRASE SUBUNIT B BACILLUS SUBTILIS 198-239 PGYRB.sub.-- BORBU DNA GYRASE SUBUNIT B BORRELIA BURGDORFERI 154-191 PGYRB.sub.-- ECOLI DNA GYRASE SUBUNIT B ESCHERICHIA COLI 616-643 PGYRB.sub.-- HALSQ DNA GYRASE SUBUNIT B HALOFERAX SP 230-257 PGYRB.sub.-- MYCPN DNA GYRASE SUBUNIT B MYCOPLASMA PNEUMONIAE 249-283 PGYRB.sub.-- NEIGO DNA GYRASE SUBUNIT B NEISSERIA GONORRHOEAE 524-558 618-645 PGYRB.sub.-- PSEPU DNA GYRASE SUBUNIT B PSEUDOMONAS PUTIDA 122-149 684-711 PGYRB.sub.-- SPICI DNA GYRASE SUBUNIT B SPIROPLASMA CITRI 40-74 189-238 283-310 341-368 540-579 PGYRB.sub.-- STAAU DNA GYRASE SUBUNIT B STAPHYLOCOCCUS AUREUS 252-279 291-318 PHDHA.sub.-- ECOLI 7-ALPHA-HYDROXYSTEROID ESCHERICHIA COLI 71-98 DEHYDROGENASE PHELD.sub.-- ECOLI HELICASE IV ESCHERICHIA COLI 100-134 529-556 PHEL.sub.-- HAEIN LIPROPROTEIN E PRECURSOR HAEMOPHILUS INFLUENZAE 58-85 PHEM1.sub.-- CHLVI GLUTAMYL-TRNA CHLOROBIUM VIBRIOFORMES 232-259 REDUCTASE PHEM1.sub.-- ECOLI GLUTAMYL-TRNA ESCHERICHIA COLI 289-316 REDUCTASE PHEM1.sub.-- RHOSH 5-AMINOLEVULINIC ACID RHODOBACTER SPHAEROIDES 73-100 SYNTHASE PHEM1.sub.-- SALTY GLUTAMYL-TRNA SALMONELLA TYPHIMURIUM 289-316 344-371 REDUCTASE( PHEM1.sub.-- SYNY3 GLUTAMYL-TRNA SYNECHOCYSTIS SP 163-190 350-377 REDUCTASE PHEM2.sub.-- METSC DELTA-AMINOLEVULINIC METHANOTHERMUS SOCIABILIS 131-158 ACID DEHYDRATASE PHEM4.sub.-- BACSU PUTATIVE UROPORPHYRINO- BACILLUS SUBTILIS 10-37 GEN-III SYNTHASE PHEM4.sub.-- ECOLI UROPORPHYRINOGEN-III ESCHERICHIA COLI 211-238 SYNTHASE PHEMM.sub.-- ECOLI HEMM PROTEIN ESCHERICHIA COLI 147-174 PHEMR.sub.-- YEREN HEMIN RECEPTOR YERSINIA ENTEROCOLITICA 234-261 PRECURSOR PHEMX.sub.-- ECOLI PUTATIVE METHYL- ESCHERICHIA COLI 69-138 185-219 TRANSFERASE PHEMY.sub.-- BACSU HEMY PROTEIN BACILLUS SUBTILIS 217-262 PHEMZ.sub.-- BACSU FERROCHELATASE BACILLUS SUBTILIS 199-226 PHETA.sub.-- ANASP HETEROCYST DIFFERENTIA- ANABAENA SP 184-211 357-398 521-565 TION PROTEIN PHEXA.sub.-- STRPN DNA MISMATCH REPAIR STREPTOCOCCUS PNEUMONIAE 426-460 PROTEIN HEXA PHEXB.sub.-- STRPN DNA MISMATCH REPAIR STREPTOCOCCUS PNEUMONIAE 470-497 PROTEIN HEXB PHFAB.sub.-- CAUCR POS TRANSACTIVATOR CAULOBACTER CRESCENTUS 98-125 PROTEIN HFAB PHFLC.sub.-- ECOLI HFLC PROTEIN ESCHERICHIA COLI 113-140 PHFLX.sub.-- ECOLI GTP-BINDING PROTEIN HFLX ESCHERICHIA COLI 169-196 PHFZ.sub.-- ECOLI HOST FACTOR-1 PROTEIN ESCHERICHIA COLI 24-51 PHIFC.sub.-- HAEIN PILIATION PROTEIN HIFC HAEMOPHILUS INFLUENZAE 356-383 404-431 447-474 PRECURSOR PHIS2.sub.-- LACLA PHOSPHORIBOSYL-AMP LACTOCOCCUS LACTIS 126-174 CYCLOHYDROLASE PHIS4.sub.-- ECOLI P-5-A CARBOXAMIDE ESCHERICHIA COLI 125-159 RIBOTIDE PHIS4.sub.-- LACLA P-5-A CARBOXAMIDE LACTOCOCCUS LACTIS 49-89 181-228 RIBOTIDE PHIS4.sub.-- METVA P-5-A CARBOXAMIDE METHANOCOCCUS VANNIELII 115-142 RIBOTIDE PHIS4.sub.-- SALTY P-5-A CARBOXAMIDE SALMONELLA TYPHIMURIUM 125-159 RIBOTIDE PHIS5.sub.-- LACLA AMIDOTRANSFERASE HISH LACTOCOCCUS LACTIS 7-34 PHIS6.sub.-- ECOLI HISF PROTEIN ESCHERICHIA COLI 39-66 142-169 PHIS6.sub.-- SALTY HISF PROTEIN SALMONELLA TYPHIMURIUM 39-66 142-169 PHIS7.sub.-- ECOLI IMIDAZOLEGLYCEROL- ESCHERICHIA COLI 168-199 PHOSPHATE DEHYDRATASE PHIS7.sub.-- SALTY IMIDAZOLEGLYCEROL- SALMONELLA TYPHIMURIUM 161-199 PHOSPHATE DEHYDRATASE PHIS8.sub.-- ECOLI HISTIDINOL-PHOSPHATE ESCHERICHIA COLI 290-317 AMINOTRANSFERASE PHIS8.sub.-- HALVO HISTIDINOL-PHOSPHATE HALOBACTERIUM VOLCANII 174-201 AMINOTRANSFERASE PHIS8.sub.-- LACLA HISTIDINOL-PHOSPHATE LACTOCOCCUS LACTIS 161-188 AMINOTRANSFERASE PHIS8.sub.-- SALTY HISTIDINOL-PHOSPHATE SALMONELLA TYPHIMURIUM 293-320 AMINOTRANSFERASE PHISQ.sub.-- SALTY HISTIDINE PERMEASE SALMONELLA TYPHIMURIUM 8-35 MEMBRANE Q PROTEIN PHISX.sub.-- ECOLI HISTIDINOL DEHYDRO- ESCHERICHIA COLI 393-434 GENASE PHISX.sub.-- LACLA HISTIDINOL DEHYDRO- LACTOCOCCUS LACTIS 19-46 264-303 GENASE PHISX.sub.-- MYCSM HISTIDINOL DEHYDRO- MYCOBACTERIUM SMEGMATIS 288-329 399-430 GENASE PHISX.sub.-- SALTY HISTIDINOL DEHYDRO- SALMONELLA TYPHIMURIUM 393-434 GENASE PHLA.sub.-- STAAU ALPHA-HEMOLYSIN STAPHYLOCOCCUS AUREUS 69-102 PRECURSOR PHLY1.sub.-- ECOLI HEMOLYSIN A, CHROMO- ESCHERICHIA COLI 5-32 76-103 161-224 234-261 353-380 458-492 554-581 642-728 SOMAL PHYL2.sub.-- ECOLI HAEMOLYSIN SECRETION ESCHERICHIA COLI 487-514 PROTEIN, CHROMOSOMA PHLY4.sub.-- ECOLI HEMOLYSIN D, CHROMO- ESCHERICHIA COLI 103-133 178-215 223-331 SOMAL PHLYA.sub.-- ACTPL HEMOLYSIN ACTINOBACILLUS PLEURO- 5-39 136-170 184-218 273-300 350-377 459-527 846-924 PNEUMONIAE PHLYA.sub.-- ACTSU HEMOLYSIN ACTINOBACILLUS SUIS 5-39 136-170 184-218 273-300 350-377 459-527 846-924 PHLYA.sub.-- ECOLI HEMOLYSIN A, PLASMID ESCHERICHIA COLI 5-32 76-103 161-262 354-381 452-493 555-582 643-729 PHLYA.sub.-- PROMI HEMOLYSIN PRECURSOR PROTEUS MIRABILIS 165-196 299-338 356-400 425-471 498-525 528-576 610-695 705-742 747-774 789-823 841-868 966-993 1113-1140 1166-1193 1225-1273 1301-1342 1391-1461 1483-1527 PHLYA.sub.-- SERMA HEMOLYSIN PRECURSOR SERRATIA MARCESCENS 311-345 477-504 558-585 625-703 718-745 830-864 1081-1108 1155-1202 1249-1286 1516-1553 PHLYA.sub.-- VIBCH HEMOLYSIN PRECURSOR VIBRIO CHOLERAE 335-369 638-665 PHLYB.sub.-- ACTPL HAEMOLYSIN SECRETION ACTINOBACILLUS PLEURO- 34-61 PROTEIN PNEUMONIAE PHLYB.sub.-- ECOLI HAEMOLYSIN SECRETION ESCHERICHIA COLI 487-514 PROTEIN, PLASMID PHLYB.sub.-- PROMO HEMOLYSIN ACTIVATOR PROTEUS MIRABILIS 16-64 499-547 PROTEIN PRECURSOR PHLYB.sub.-- PROVU HAEMOLYSIN SECRETION PROTEUS VULGARIS 34-68 487-514 PROTEIN PHLYB.sub.-- SERMA HEMOLYSIN ACTIVATOR SERRATIA MARCESCENS 110-137 PROTEIN PRECURSOR PHLYB.sub.-- VIBCH HEMOLYSIN SECRETION VIBRIO CHOLERAE 335-398 413-447 458-524 PROTEIN PRECURSOR PHLYC.sub.-- ACTPL HEMOLYSIN C ACTINOBACILLUS PLEURO- 130-157 PNEUMONIAE PHLYD.sub.-- ACTPL HEMOLYSIN SECRETION ACTINOBACILLUS PLEURO- 191-331 PROTEIN APPD PNEUMONIAE PHLYD.sub.-- ECOLI HEMOLYSIN D, PLASMID ESCHERICHIA COLI 103-133 178-215 223-331 PHLY.sub.-- HALI7 HALOLYSIN PRECURSOR HALOPHILIC BACTERIA 484-516 STRAIN 172P1 PHMC3.sub.-- DESVH 43.2 KD PROTEIN IN HMC DESULFOBIVRIO VULGARIS 156-186 OPERON PHMD.sub.-- METKA H(2)-FORMING DEHYDRO- METHANOPYRUS KANDLERI 36-63 GENASE PHNS.sub.-- SERMA DNA-BINDING PROTEIN H-NS SERRATIA MARCESCENS 35-62 PHOLA.sub.-- ECOLI DNA POLYMERASE III, DELTA ESCHERICHIA COLI 94-121 288-322 SUBUNIT PHOXA.sub.-- BRAJA REG PROTEIN HOXA BRADYRHIZOBIUM JAPONICUM 113-163 444-471 PHOXF.sub.-- NOCOP HOXS ALPHA SUBUNIT NOCARDIA OPACA 4-31 PHOXQ.sub.-- ALCEU HOXQ PROTEIN ALCALIGENES EUTROPHUS 76-110 PHOXX.sub.-- BRAJA HOXX PROTEIN BRADYRHIZOBIUM JAPONICUM 356-383 PHPI.sub.-- DEIRA HEXAGONALLY SURFACE DEINOCCCUS RADIODURANS 585-612 PROTEIN PRECURSOR PHPRT.sub.-- LACLA PHOSPHORIBOSYL- LACTOCOCCUS LACTIS 3-39 71-105 TRANSFERASE PHRDD.sub.-- STRCO SIGMA FACTOR HRDD STREPTOMYCES COELICOLOR 296-323 PHRPB.sub.-- BURSO REGULATORY PROTEIN HRPB BURKHOLDERIA SOLANACEARUM 371-405 PHRPH.sub.-- PSESY OUTER MEMBRANE PROTEIN PSEUDOMONAS SYRINGAE 102-129 310-344 HRPH PRECURSOR PHRPS.sub.-- PSESH PROBABLE REGULATORY PSEUDOMONAS SYRINGAE 24-51 PROTEIN HRPS PHS18.sub.-- CLOAB 18 KB HEAT SHOCK PROTEIN CLOSTRIDIUM ACETOBUTYLICUM 67-108 PHS70.sub.-- HALMA HEAT SHOCK 70 KD PROTEIN HALOARCULA MARISMORTUI 522-576 PHS70.sub.-- MYCLE HEAT SHOCK 70 KD PROTEIN MYCOBACTERIUM LEPRAE 461-488 503-530 PHS70.sub.-- MYCPA HEAT SHOCK 70 KD PROTEIN MYCOBACTERIUM PARA- 460-487 TUBERCULOSIS PHTPG.sub.-- ECOLI HEAT SHOCK PROTEIN C62.5 ESCHERICHIA COLI 221-248 482-509 PHTRA.sub.-- ECOLI PROTEASE DO PRECURSOR ESCHERICHIA COLI 373-400 PHTRE.sub.-- ECOLI HTRE PROTEIN PRECURSOR ESCHERICHIA COLI 454-484 524-576 PHTRJ.sub.-- HALHA SENSORY RHODOPSIN I HALOBACTERIUM HALOBIUM 413-471 479-506 TRANSDUCER PHTRJ.sub.-- HALSA SENSORY RHODOPSIN I HALOBACTERIUM SALINARIUM 114-159 413-471 479-506 TRANSDUCER PHUTP.sub.-- BACSU HUT OPERON POSITIVE BACILLUS SUBTILIS 5-36 REGULATORY PROTEIN PHVTJ.sub.-- LACHE HELVETICIN J LACTOBACILLUS HELVETICUS 174-212 306-333 PHYCA.sub.-- ECOLI FORMATE HYDROGENYLASE ESCHERICHIA COLI 73-100 106-133 SUBUNIT 1 PHYDG.sub.-- ECOLI TRANSCRIPTIONAL REGULA- ESCHERICHIA COLI 251-278 TORY PROTEIN HYDG PHYDG.sub.-- SALTY TRANSCRIPTIONAL REGULA- SALMONELLA TYPHIMURIUM 251-278 TORY PROTEIN HYDG PHYDH.sub.-- ECOLI SENSOR PROTEIN HYDH ESCHERICHIA COLI 312-339 360-387 PHYUB.sub.-- PSESN HYDANTOIN UTILIZATION PSEUDOMONAS SP 554-581 PROTEIN B PHYUC.sub.-- PSESN HYDANTOIN UTILIZATION PSEUDOMONAS SP 6-40 96-123 PROTEIN PIAAL.sub.-- PSESS INDOLEACETATE-LYSINE PSEUDOMONAS SYRINGAE 133-160 297-331 LIGASE PIAP.sub.-- ECOLI ALK PHOS ISOZYME CONVER- ESCHERICHIA COLI 74-101 SION PROTEIN PICEN.sub.-- ERWAN ICE NUCLEATION PROTEIN ERWINIA ANANAS 326-353 422-449 534-561 614-641 662-689 721-748 758-785 854-881 950-977 1046-1073 PICEN.sub.-- ERWHE ICE NUCLEATION PROTEIN ERWINIA HERBIOCOLA 310-337 406-433 534-561 646-673 694-721 838-865 886-913 982-1009 PICEN.sub.-- PSEFL ICE NUCLEATION PROTEIN PSEUDOMONAS FLUORESCENS 281-308 377-404 425-452 681-708 729-781 795-852 PICEN.sub.-- PSESY ICE NUCLEATION PROTEIN PSEUDOMONAS SYRINGAE 564-602 772-847 868-895 909-943 PICEN.sub.-- XANCT ICE NUCLEATION PROTEIN XANTHOMONAS CAMPESTRIS 496-534 555-582 1168-1204 1248-1275 PICSB.sub.-- SHIFL INTERCELLULAR SPREAD SHIGELLA FLEXNERI 41-105 438-467 PROTEIN PIF2.sub.-- BACST INITIATION FACTOR IF-2 BACILLUS STEAROTHERMOPHILUS 540-567 681-708 PIF2.sub.-- BACSU INITIATION FACTOR IF-2 BACILLUS SUBTILIS 173-208 394-421 PIF2.sub.-- ECOLI INITIATION FACTOR IF-2 ESCHERICHIA COLI 686-724 835-862 PIF2.sub.-- ENTFC INITIATION FACTOR IF-2 ENTEROCOCCUS FAECIUM 579-627 PIF3.sub.-- BACST INITIATION FACTOR IF-3 BACILLUS STEAROTHERMOPHILUS 7-34 PIF3.sub.-- ECOLI INITIATION FACTOR IF-3 ESCHERICHIA COLI 27-54 70-97 PIF3.sub.-- KLEPN INITIATION FACTOR IF-3 KLEBSIELLA PNEUMONIAE 27-54 70-97 PIF3.sub.-- MYCFE INITIATION FACTOR IF-3 MYCOPLASMA FERMENTANS 177-211 PIF3.sub.-- PROVU INITIATION FACTOR IF-3 PROTEUS VULGARIS 2-29 70-97 PIF3.sub.-- SALTY INITIATION FACTOR IF-3 SALMONELLA TYPHIMURIUM 27-54 70-97 PIF3.sub.-- SERMA INITIATION FACTOR IF-3 SERRATIA MARCESCENS 19-46 70-97 PIGA.sub.-- NEIGO IGA-SPECIFIC SERINE NEISSERIA GONORRHOEAE 245-272 287-314 833-860 1024-1058 1377-1404 1483-1531 ENDOPEPTIDASE PIGGB.sub.-- STRSP IGG BINDING PROTEIN STREPTOCOCCUS SP 46-76 120-150 195-222 PRECURSOR PIGGG.sub.-- STRSP IGG BINDING PROTEIN STREPTOCOCCUS SP 46-76 120-150 195-225 270-297 PRECURSOR PILVH.sub.-- ECOLI ACETOLACTATE SYNTHASE ESCHERICHIA COLI 47-81 120-147 PILVH.sub.-- SALTY ACETOLACTATE SYNTHASE SALMONELLA TYPHIMURIUM 47-81 120-147 PILVN.sub.-- LACLA ACETOLACTATE SYNTHASE LACTOCOCCUS LACTIS 20-75 PIMPB.sub.-- SALTY IMPB PROTEIN SALMONELLA TYPHIMURIUM 185-212 PIMP.sub.-- ACICA INOSINE-5'-MONOPHOSPHATE ACINETOBACTER CALCOACETICUS 166-193 DEHYDROGENASE PIMP.sub.-- BACSU E-5'-MONOPHOSPHATE BACILLUS SUBTILIS 159-186 DEHYDROGENASE PINA.sub.-- BACTL IMMUNE INHIBITOR A BACILLUS THURINGIENSIS 103-130 324-358 PRECURSOR PINLA.sub.-- LISMO INTERNALIN A LISTERIA MONOCYTOGENES 106-143 161-188 196-232 PINLB.sub.-- LISMO INTERNALIN B PRECURSOR LISTERIA MONOCYTOGENES 53-94 166-200 385-415 PINVA.sub .-- YEREN INVASIN YERSINIA ENTEROCOLITICA 501-535 PIPA7.sub.-- SHIFL 60 KD ANTIGEN SHIGELLA FLEXNERI 285-312 PIPAA.sub. -- SHIFL 70 KD ANTIGEN SHIGELLA FLEXNERI 95-136 437-475 493-557 596-630 PIPAB.sub.-- SHIDY 62 KD MEMBRANE ANTIGEN SHIGELLA DYSENTERIAE 28-55 71-169 480-507 522-556 PIPAB.sub.-- SHIFL 62 KD MEMBRANE ANTIGEN SHIGELLA FLEXNERI 28-55 71-169 480-507 522-556 PIPAC.sub.-- SHIDY 42 KD MEMBRANE ANTIGEN SHIGELLA DYSENTERIAE 21-57 113-161 273-300 324-378 PRECURSOR PIPAC.sub.-- SHIFL 42 KD MEMBRANE ANTIGEN SHIGELLA FLEXNERI 28-57 113-161 273-300 324-372 PRECURSOR PIPAD.sub.-- SHIDY 37 KD MEMBRANE ANTIGEN SHIGELLA DYSENTERIAE 47-86 291-318 IPAD PIPAD.sub.-- SHIFL 36 KD MEMBRANE ANTIGEN SHIGELLA FLEXNERI 47-86 259-286 291-318 PIPGB.sub.-- SHIDY IPGB PROTEIN SHIGELLA DYSENTERIAE 175-202 PIPGB.sub.-- SHIFL IPGB PROTEIN SHIGELLA FLEXNERI 175-202 PIPT.sub.-- PSESS ISOPENTENYL TRANSFERASE PSEUDOMONAS SYRINGAE 53-87 143-173 PIPYR.sub.-- ECOLI INORGANIC PYROPHOSPHA- ESCHERICHIA COLI 138-172 TASE PIRGA.sub.-- VIBCH VIRULENCE PROTEIN VIBRIO CHOLERAE 212-239 336-377 PRECURSOR PIRGB.sub.-- VIBCH VIRULENCE REGULATORY VIBRIO CHOLERAE 67-97 PROTEIN IRGB PIRPA.sub.-- SYNP7 IRON-REGULATED PROTEIN A SYNECHOCOCCUS SP 167-194 PISBD.sub.-- SHIDY INSERTION ELEMENT ISO- SHIGELLA DYSENTERIAE 86-113 ISID PROTEIN INSB PISBN.sub.-- SHIDY INSERTION ELEMENT ISO- SHIGELLA DYSENTERIAE 6-37 ISIN PROTEIN INSB PISB.sub.-- ECOLI INSERTION ELEMENT IS1 ESCHERICHIA COLI 122-149 PROTEIN INSB PISB.sub.-- SHIFL INSERTION ELEMENT IS1 SHIGELLA FLEXNERI 86-113 PROTEIN INSB PISB.sub.-- SHISO INSERTION ELEMENT IS1 SHIGELLA SONNEI 86-113 PROTEIN INSB PISP1.sub.-- BACSU MAJOR INTRACELLULAR BACILLUS SUBTILIS 115-142 197-224 253-280 SERINE PROTEASE PISP.sub.-- BACPO INTRACELLULAR SERINE BACILLUS POLYMYXA 109-143 PROTEASE PISTA.sub.-- ECOLI ISTA PROTEIN ESCHERICHIA COLI 183-210 PISTA.sub.-- SHISO ISTA PROTEIN SHIGELLA SONNEI 183-210 PIUTA.sub.-- ECOLI FERRIC AEROBACTIN ESCHERICHIA COLI 186-213 525-552 559-593 RECEPTOR PRECURSOR PJAG.sub.-- BACSU JAG PROTEIN BACILLUS SUBTILIS 68-95 PK6P2.sub.-- ECOLI 6-PHOSPHOFRUCTOKINASE ESCHERICHIA COLI 143-170 ISOZYME 2 PKAD.sub.-- BACSU ADENYLATE KINASE BACILLUS SUBTILIS 188-215 PKAD.sub.-- LACLA ADENYLATE KINASE LACTOCOCCUS LACTIS 186-213 PKANU.sub.-- BACSP KANAMYCIN NUCLEOTIDYL- BACILLUS SP 69-96 TRANSFERASE PKANU.sub.-- STAAU KANAMYCIN NUCLEOTIDYL- STAPHYLOCOCCUS AUREUS 69-96 TRANSFERASE PKDGT.sub.-- ECOLI 2-KETO-3-DEOXYGLUCONATE ESCHERICHIA COLI 70-97 PERMEASE PKDGT.sub.-- ERWCH 2-KETO-3-DEOXYGLUCONATE ERWINIA CHRYSANTHEMI 126-153 PERMEASE PKDTA.sub.-- ECOLI 3-DEOXY-D-MANNO- ESCHERICHIA COLI 369-396 OCTULOSONIC-ACID TRANS PKGTP.sub.-- ECOLI ALPHA-DETOGLUTARATE ESCHERICHIA COLI 7-34 PERMEASE PKGUA.sub.-- ECOLI GUANYLATE KINASE ESCHERICHIA COLI 162-189 PKHSE.sub.-- BACSU HOMOSERINE KINASE BACILLUS SUBTILIS 49-76 PKHSE.sub.-- FREDI HOMOSERINE KINASE FREMYELLA DIPLOSIPHON 52-79 PKKA4.sub.-- BACCI AMINOGLYCOSIDE 3'- BACILLUS CIRCULANS 12-39 PHOSPHOTRANSFERASE PKORB.sub.-- ECOLI KORB TRANSCRIPTIONAL ESCHERICHIA COLI 228-255 REPRESSOR PROTEIN PKPY1.sub.-- SPICI PYRUVATE KINASE SPIROPLASMA CITRI 112-148 PKPYK.sub.-- BACST PYRUVATE KINASE BACILLUS STEAROTHERMOPHILUS 331-374 PLACA.sub.-- STAAU ISOMERASE LACA SUBUNIT STAPHYLOCOCCUS AUREUS 9-64 PLACA.sub.-- STRMU ISOMERASE LACA SUBUNIT STAPHYLOCOCCUS MUTANS 26-60 PLACA.sub.-- STRMU TAGATOSE-6-PHOSPHATE STAPHYLOCOCCUS MUTANS 56-83 283-310 KINASE PLACG.sub.-- LACCA 6-PHOSPHO-BETA-GALACTO- LACTOBACILLUS CASEI 290-317 SIDASE PLACI.sub.-- ECOLI LACTOSE OPERON ESCHERICHIA COLI 9-36 REPRESSOR PLACI.sub.-- KLEPN LACTOSE OPERON KLEBSIELLA PNEUMONIAE 195-229 REPRESSOR PLACR.sub.-- STAAU PHOSPHOTRANSFERASE STAPHYLOCOCCUS AUREUS 2-29 REPRESSOR PLACR.sub.-- STRMU PHOSPHOTRANSFERASE STREPTOCOCCUS MUTANS 2-32 REPRESSOR PLACY.sub.-- LACDE LACTOSE PERMEASE LACTOBACILLUS DELBRUECKII 196-230 PLAFB.sub.-- VIBPA FLAGELLAR HOOK- VIBRIO PARAHAEMOLYTICUS 62-89 388-415 ASSOCIATED PROTEIN 2 PLAMB.sub.-- KLEPN MALTOPORIN PRECURSOR KLEBSIELLA PNEUMONIAE 337-364 PLAMI.sub.-- CLOTM ENDO-1,3(4)-BETA- CLOSTRIDIUM THERMOCELLUM 132-159 GLUCANASE PRECURSOR PLASI.sub.-- PSEAE OHHL SYNTHESIS PROTEIN PSEUDOMONAS AERUGINOSA 171-198 LASI PLCCI.sub.-- LEUGE PROBABLE LEUCOCIN A LEUCONOSTOC GELIDUM 41-71 IMMUNITY PROTEIN PLCNC.sub.-- LACLA LACTOCOCCIN A SECRETION LACTOCOCCUS LACTIS 162-189 207-234 388-433 PROTEIN LCNC PLCND.sub.-- LACLA LACTOCOCCIN A SECRETION LACTOCOCCUS LACTIS 99-126 140-202 237-307 PROTEIN LCND PLCRD.sub.-- YEREN LOW CALCIUM RESPONSE YERSINIA ENTEROCOLITICA 122-149 491-518 LOCUS PROTEIN D PLCRD.sub.-- YERPE LOW CALCIUM RESPONSE YERSINIA PESTIS 122-149 491-518 LOCUS PROTEIN D PLCRV.sub.-- YERPE VIRULENCE-ASSOCIATED V YERSINIA PESTIS 22-49 157-184 240-267 ANTIGEN PLCRV.sub.-- YERPS VIRULENCE-ASSOCIATED V YERSINIA PSEUDOTUBERCULOSIS 22-49 240-267 ANTIGEN PLCTB.sub.-- BACCA LCTB PROTEIN BACILLUS CALDOTENAX 18-45 PLCTB.sub.-- BACST LCTB PROTEIN BACILLUS STEAROTHERMOPHILUS 14-45 PLDHD.sub.-- LACPL D-LACTATE DEHYDRO- LACTOBACILLUS PLANTARUM 51-81 GENASE PLDHP.sub.-- BACPS L-LACTATE DEHYDRO- BACILLUS PSYCHRO- 2-43 241-272 279-306 GENASE P SACCHAROLYTICUS PLDHX.sub.-- BACPS L-LACTATE DEHYDRO- BACILLUS PSYCHRO- 2-43 241-275 279-306 GENASE X SACCHAROLYTICUS PLDH.sub.-- BACME L-LACTATE DEHYDRO- BACILLUS MEGATERIUM 244-274 GENASE PLDH.sub.-- BACST L-LACTATE DEHYDRO- BACILLUS STEAROTHERMOPHILUS 241-268 279-313 GENASE PLDH.sub.-- BACSU L-LACTATE DEHYDRO- BACILLUS SUBTILIS 8-42 240-267 GENASE PLDH.sub.-- BIFLO L-LACTATE DEHYDRO- BIFIDOBACTERIUM LONGUM 22-49 GENASE PLDH.sub.-- LACPL L-LACTATE DEHYDRO- LACTOBACILLUS PLANTARUM 197-231 GENASE PLDH.sub.-- LISMO L-LACTATE DEHYDRO- LISTERIA MONOCYTOGENES 42-69 GENASE PLDH.sub.-- MYCHY L-LACTATE DEHYDRO- MYCOPLASMA HYOPNEUMONIAE 276-310 GENASE PLDH.sub.-- THEAQ L-LACTATE DEHYDRO- THERMUS AQUATICUS 3-30 GENASE PLEF.sub.-- BACAN LETHAL FACTOR PRECURSOR BACILLUS ANTHRACIS 165-192 304-331 480-514 548-578 619-658 737-764 PLEPA.sub.-- PSEFL LEPA PROTEIN PSEUDOMONAS FLUORESCENS 23-50 PLEP.sub.-- BACSU SIGNAL PEPTIDASE I BACILLUS SUBTILIS 3-30 PLEU1.sub.-- ECOLI 2-ISOPROPYLMALATE E SCHERICHIA COLI 437-464 SYNTHASE PLEU1.sub.-- LACLA 2-ISOPROPYLMALATE LACTOCOCCUS LACTIS 22-49 379-484 SYNTHASE PLEU3.sub.-- BACCO 3-ISOPROPYLMALATE BACILLUS COAGULANS 331-358 DEHYDROGENASE PLEU3.sub.-- CLOPA 3-ISOPROPYLMALATE CLOSTRIDIUM PASTEURIANUM 185-212 DEHYDROGENASE PLEUD.sub.-- LACLA 3-ISOPROPYLMALATE LACTOCOCCUS LACTIS 163-190 DEHYDRATASE PLEVR.sub.-- BACSU TRANSCRIPTIONAL REGULA- BACILLUS SUBTILIS 297-324 676-703 744-774 785-822 TORY PROTEIN LEVR PLEXA.sub.-- ERWCA LEXA REPRESSOR ERWINIA CAROTOVORA 146-173 PLIP1.sub.-- MORSP LIPASE 1 MORAXELLA SP 26-53 PLIP2.sub.-- MORSP LIPASE 2 MORAXELLA SP 356-383 PLIPB.sub.-- ECOLI LIPB PROTEIN ESCHERICHIA COLI 66-93 PLIP.sub.-- BURCE LIPASE PRECURSOR BURKHOLDERIA CEPACIA 176-203 PLIP.sub.-- PSEFL LIPASE PRECURSOR PSEUDOMONAS FLUORESCENS 8-35 PLIP.sub.-- PSES5 LIPASE PRECURSOR PSEUDOMONAS SP 176-203 PLIP.sub.-- STAAU LIPASE PRECURSOR STAPHYLOCOCCUS AUREUS 80-146 512-546 PLIVB.sub.-- SALTY LEU/ILE/VAL/THR-BINDING SALMONELLA TYPHIMURIUM 193-220 PROTEIN PRECURSOR PLIVC.sub.-- SALTY LEUCINE-SPECIFIC BINDING SALMONELLA TYPHIMURIUM 195-222 PROTEIN PRECURSOR PLIVE.sub.-- SALTY AMINO ACID TRANSPORT SALMONELLA TYPHIMURIUM 121-148 PROTEIN LIVE PLIVF.sub.-- ECOLI AMINO ACID TRANSPORT ESCHERICHIA COLI 23-50 PROTEIN LIVF PLIVJ.sub.-- CITFR LEU/ILE/VAL-BINDING CITROBACTER FREUNDII 195-222 PROTEIN PRECURSOR PLIVJ.sub.-- ECOLI LEU/ILE/VAL-BINDING ESCHERICHIA COLI 195-222 PROTEIN PRECURSOR PLIVK.sub.-- ECOLI LEUCINE-SPECIFIC BINDING ESCHERICHIA COLI 195-222 PROTEIN PRECURSOR PLIVM.sub.-- ECOLI AMINO ACID TRANSPORT ESCHERICHIA COLI 121-148 PROTEIN LIVM PLKTA.sub.-- ACTAC LEUKOTOXIN ACTINOBACILLUS ACTINO- 113-147 173-213 398-443 451-488 593-620 655-711 MYCETEMCOMITANS PLKTA.sub.-- PASHA LEUKOTOXIN PASTEURELLA HAEMOLYTICA 53-99 179-216 345-372 409-436 455-482 496-530 545-572 811-838 853-926 PLKTB.sub.-- ACTAC LEUKOTOXIN SECRETION ACTINOBACILLUS ACTINO- 487-514 PROTEIN MYCETEMCOMITANS PLKTB.sub.-- PASHA LEUKOTOXIN SECRETION PASTEURELLA HAEMOLYTICA 42-69 78-105 488-515 PROTEIN PLKTC.sub.-- ACTAC LTC PROTEIN ACTINOBACILLUS ACTINO- 58-85 116-150 MYCETEMCOMITANS PLKTC.sub.-- PASHA LKTC PROTEIN PASTEURELLA HAEMOLYTICA 123-157 PLKTD.sub.-- ACTAC LKTD PROTEIN ACTINOBACILLUS ACTINO- 116-164 205-242 278-305 364-391 MYCETEMCOMITANS PLKTD.sub.-- PASHA LKTD PROTEIN PASTEURELLA HAEMOLYTICA 184-289 PLON.sub.-- ECOLI ATP-DEPENDENT PROTEASE ESCHERICHIA COLI 121-148 LA PLPXA.sub.-- RICRI UDP-N-ACETYLGLUCO- RICKETTSIA RICKETTSII 229-256 SAMINE ACYLTRANSFERASE PLSPA.sub.-- ECOLI LIPOPROTEIN SIGNAL ESCHERICHIA COLI 10-37 PEPTIDASE PLSPA.sub.-- STAAU LIPOPROTEIN SIGNAL STAPHYLOCOCCUS AUREUS 134-161 PEPTIDASE PLUKF.sub.-- STAAU LEUKOCIDIN F SUBUNIT STAPHYLOCOCCUS AUREUS 161-195 PRECURSOR PLUKS.sub.-- STAAU LEUKOCIDIN S SUBUNIT STAPHYLOCOCCUS AUREUS 157-207 PRECURSOR PLUXA.sub.-- KRYAL ALKANAL MONOOXYGENASE KRYPTOPHANARON ALFREDI 190-217 ALPHA CHAIN PLUXB.sub.-- PHOPO ALKANAL MONOOXYGENASE PHOTOBACTERIUM 188-217 257-291 BETA CHAIN PHOSPHOREUM PLUXB.sub.-- VIBHA ALKANAL MONOOXYGENASE VIBRIO HARVEYI 373-400 BETA CHAIN PLUXC.sub.-- PHOLE ACYL-COA REDUCTASE PHOTOBACTERIUM LEIOGNATHI 44-81 PLUXC.sub.-- PHOPO ACYL-COA REDUCTASE PHOTOBACTERIUM 54-91 PHOSPHOREUM PLUXC.sub.-- VIBFI ACYL-COA REDUCTASE VIBRIO FISCHERI 16-65 PLUXC.sub.-- XENLU ACYL-COA REDUCTASE XENORHABDUS LUMINESCENS 39-69 PLUXD.sub.- - PHOLE ACYL TRANSFERASE PHOTOBACTERIUM LEIOGNATHI 89-119 218-245 PLUXE.sub.-- VIBHA LUCIFERIN-COMPONENT VIBRIO HARVEYI 30-57 LIGASE PLUXF.sub.-- PHOLE NON-FLUORESCENT FLAVO- PHOTOBACTERIUM LEIOGNATHI 145-172 PROTEIN PLUXF.sub.-- PHOPO NON-FLUORESCENT FLAVO- PHOTOBACTERIUM 37-85 99-126 PROTEIN PHOSPHOREUM PLUXG.sub.-- VIBFI PROBABLE FLAVIN VIBRIO FISCHERI 137-168 REDUCTASE PLUXH.sub.-- VIBHA LUXH PROTEIN VIBRIO HARVEYI 96-123 PLUXI.sub.-- VIBFI OHHL SYNTHESIS PROTEIN VIBRIO FISCHERI 30-58 LUXI PLUXJ.sub.-- VIBFI OHHL SYNTHESIS PROTEIN VIBRIO FISCHERI 30-57 LUXI PLUXP.sub.-- PHOPO LUMAZINE PROTEIN PHOTOBACTERIUM 51-85 162-189 PHOSPHOREUM PLUXR.sub.-- VIBHA LUXR REGULATORY PROTEIN VIBRIO HARVEYI 61-88 PLXB1.sub.-- PHOLE ALKANAL MONOOXYGENASE PHOTOBACTERIUM LEIOGNATHI 268-295 BETA CHAIN PLXB2.sub.-- PHOLE ALKANAL MONOOXYGENASE PHOTOBACTERIUM LEIOGNATHI 228-255 BETA CHAIN PLYB.sub.-- BACSU B-ENZYME BACILLUS SUBTILIS 87-114 PLYC.sub.-- CLOAB AUTOLYTIC LYSOZYME CLOSTRIDIUM ACETOBUTYLICUM 91-118 PLYSP.sub.-- ECOLI LYSINE-SPECIFIC PERMEASE ESCHERICHIA COLI 142-176 PLYTB.sub.-- BACSU AMIDASE ENHANCER BACILLUS SUBTILIS 55-82 150-177 467-513 555-585 PRECURSOR PLYTB.sub.-- ECOLI LYTB PROTEIN ESCHERICHIA COLI 210-237 PLYTC.sub.-- BACSU AMIDASE PRECURSOR BACILLUS SUBTILIS 179-213 225-252 PLYTR.sub.-- BACSU MEMBRANE-BOUND PROTEIN BACILLUS SUBTILIS 13-64 259-303 LYTR PM12.sub.-- STRPY M PROTEIN, SEROTYPE 12 STREPTOCOCCUS PYOGENES 46-92 114-156 191-300 305-342 383-417 436-494 PRECURSOR PM24.sub.-- STRPY M PROTEIN, SEROTYPE 24 STREPTOCOCCUS PYOGENES 12-46 89-128 175-202 245-272 280-313 399-457 PRECURSOR PM49.sub.-- STRPY M PROTEIN, SEROTYPE 49 STREPTOCOCCUS PYOGENES 12-174 269-327 PRECURSOR PM5.sub.-- STRPY M PROTEIN, SEROTYPE 5 STREPTOCOCCUS PYOGENES 5-39 56-263 306-333 352-410 PRECURSOR PM6.sub.-- STRPY M PROTEIN, SEROTYPE 6 STREPTOCOCCUS PYOGENES 12-39 70-282 290-324 343-401 PRECURSOR PMALE.sub.-- ECOLI MALTOSE-BINDING PROTEIN ESCHERICHIA COLI 20-47 PRECURSOR PMALE.sub.-- ENTAE MALTOSE-BINDING PROTEIN ENTEROBACTER AEROGENES 20-47 PRECURSOR PMALK.sub.-- ENTAE INNER MEMBRANE PROTEIN ENTEROBACTER AEROGENES 3-30 MALK PMALT.sub.-- ECOLI MALT REGULATORY PROTEIN ESCHERICHIA COLI 852-879 PMALX.sub.-- STRPN MALX PROTEIN PRECURSOR STREPTOCOCCUS PNEUMONIAE 40-67 180-207 PMANB.sub.-- BACSM 1,4-BETA-MANNOSIDASE A BACILLUS SP 410-441 AND B PREC PMANB.sub.-- CALSA B-MANNANASE/ENDO- CALDOCELLUM 389-423 592-626 1222-1256 1296-1323 GLUCANASE A PREC SACCHAROLYTICUM PMAOX.sub.-- BACST MALATE OXIDOREDUCTASE BACILLUS STEAROTHERMOPHILUS 246-273 PMARR.sub.-- ECOLI ANTIBIOTIC RESISTANCE ESCHERICHIA COLI 95-122 PROTEIN MARR PMBEB.sub.-- ECOLI MOBILIZATION PROTEIN ESCHERICHIA COLI 38-65 100-134 MBEB PMBHL.sub.-- WOLSU QUINONE-REAC NI/FE- WOLINELLA SUCCINOGENES 440-471 HYDROGENASE PMCBB.sub.-- ECOLI MCBB PROTEIN ESCHERICHIA COLI 47-74 122-163 PMCBD.sub.-- ECOLI MCBD PROTEIN ESCHERICHIA COLI 172-206 226-253 306-345 PMCP1.sub.-- ECOLI METHYL-ACCEPTING ESCHERICHIA COLI 272-299 CHEMOTAXIS PROTEIN I PMCP2.sub.-- ECOLI METHYL-ACCEPTING ESCHERICHIA COLI 258-306 CHEMOTAXIS PROTEIN II PMCP2.sub.-- SALTY METHYL-ACCEPTING SALMONELLA TYPHIMURIUM 258-306 CHEMOTAXIS PROTEIN II PMCP3.sub.-- ECOLI METHYL-ACCEPTING ESCHERICHIA COLI 288-315 CHEMOTAXIS PROTEIN III PMC4.sub.-- ECOLI METHYL-ACCEPTING ESCHERICHIA COLI 111-145 164-191 277-304 CHEMOTAXIS PROTEIN IV PMCPA.sub.-- CAUCR CHEMORECEPTOR MCPA CAULOBACTER CRESCENTUS 260-287 369-403 516-543 PMCPC.sub .-- SALTY CHEMOTAXIS CITRATE SALMONELLA TYPHIMURIUM 314-348 TRANDUCER PMCPD.sub.-- ENTAE CHEMOTAXIS ASPARTATE ENTEROBACTER AEROGENES 275-302 TRANSDUCER PMCPS.sub.-- ENTAE CHEMOTAXIS SERINE ENTEROBACTER AEROGENES 41-68 158-208 317-351 488-522 TRANSDUCER PMCRA.sub.-- ECOLI SPECIFIC RESTRICTION ESCHERICHIA COLI 37-71 ENZYME A PMCRA.sub.-- METBA METHYL-COENZYME M METHANOSARCINA BARKERI 375-405 REDUCTASE PMCRA.sub.-- METVA METHYL-COENZYME M METHANOCOCCUS VANNIELII 335-362 REDUCTASE PMCRA.sub.-- METVO METHYL-COENZYME M METHANOCOCCUS VOLTAE 336-363 REDUCTASE PMCRB.sub.-- METFE METHYL-COENZYME M METHANOTHERMUS FERVIDUS 267-294 REDUCTASE PMCRB.sub.-- METVO METHYL-COENZYME M METHANOCOCCUS VOLTAE 247-274 REDUCTASE PMCRC.sub.-- ECOLI MCRC PROTEIN ESCHERICHIA COLI 111-145 PMCRD.sub.-- METVO REDUCTASE OPERON METHANOCOCCUS VOLTAE 54-91 PROTEIN D PMDH.sub.-- ECOLI MALATE DEHYDROGENASE ESCHERICHIA COLI 127-154 PMDH.sub.-- METFE MALATE DEHYDROGENASE METHANOTHERMUS FERVIDUS 54-88 PMDH.sub.-- SALTY MALATE DEHYDROGENASE SALMONELLA TYPHIMURIUM 127-154 PMDL.sub.-- ECOLI MDL PROTEIN ESCHERICHIA COLI 464-491 684-711 992-1019 PMDOH.sub.-- ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI 119-152 MDOH PMECI.sub.-- STAEP METHICILLIN RESIS REG STAPHYLOCOCCUS EPIDERMIDIS & 88-122 PROTEIN MECI AUREUS PMECR.sub.-- STAEP METHICILLIN RESISTANCE STAPHYLOCOCCUS EPIDERMIDIS & 439-495 546-573 MECR1 PROTEIN AUREUS PMEMB.sub.-- METCA METHANE MONOOXYGENASE METHYLOCOCCUS CAPSULATUS 214-248 COMPONENT A PMEMB.sub.-- METTR METHANE MONOOXYGENASE METHYLOSINUS TRICHOSPORIUM 321-348 COMPONENT A PMEND.sub.-- ECOLI SHCHC SYNTHASE ESCHERICHIA COLI 333-367 PMER4.sub.-- STRLI PROBABLE HG TRANSPORT STREPTOMYCES LIVIDANS 159-186 PROTEIN PMERA.sub.-- BACSR MERCURIC REDUCTASE BACILLUS SP 146-180 PMERA.sub.-- STAAU MERCURIC REDUCTASE STAPHYLOCOCCUS AUREUS 292-347 352-386 PMERR.sub.-- STAAU MERCURIC RESISTANCE STAPHYLOCOCCUS AUREUS 86-113 OPERON REG PROTEIN PMETB.sub.-- ECOLI CYSTATHIONINE GAMMA- ESCHERICHIA COLI 356-383 SYNTHASE PMETC.sub.-- ECOLI CYSTATHIONINE BETA- ESCHERICHIA COLI 363-390 LYASE PMETC.sub.-- SALTY CYSTATHIONINE BETA- SALMONELLA TYPHIMURIUM 2-29 LYASE PMETE.sub.-- ECOLI METHIONINE SYNTHASE ESCHERICHIA COLI 448-482 PMETH.sub.-- ECOLI METHIONINE SYNTHASE ESCHERICHIA COLI 371-398 642-676 PMFD.sub.-- ECOLI TRANSCRIPTION-REPAIR ESCHERICHIA COLI 185-212 COUPLING FACTOR PMGLA.sub.-- ECOLI GALACTOSIDE-BINDING ESCHERICHIA COLI 62-89 312-380 PROTEIN PMINC.sub.-- BACSU SEPTUM SITE-DETERMINING BACILLUS SUBTILIS 65-122 PROTEIN MINC PMIOC.sub.-- ECOLI MIOC PROTEIN ESCHERICHIA COLI 102-129 PM1P.sub.-- CHLTR 27 KD MEMBRANE PROTEIN CHLAMYDIA TRACHOMATIS 41-75 PRECURSOR PM1P.sub.-- LEGMI OUTER MEMBRANE PROTEIN LEGIONELLA MICDADEI 106-133 MIP PRECURSOR PMLS1.sub.-- ENTFA RRNA ADENINE N-6-METHYL- ENTEROCOCCUS FAECALIS 4-81 20-154 TRANSFERASE PMLS1.sub.-- STAAU RRNA ADENINE N-6-METHYL- STAPHYLOCOCCUS AUREUS 9-47 TRANSFERASE PMCRB.sub.-- METFE METHYL-COENZYME M METHANOTHERMUS FERVIDUS 267-294 REDUCTASE PMCRB.sub.-- METVO METHYL-COENZYME M METHANOCOCCUS VOLTAE 247-274 REDUCTASE PMCRC.sub.-- ECOLI MCRC PROTEIN ESCHERICHIA COLI 111-145 PMCRD.sub.-- METVO REDUCTASE OPERON METHANOCOCCUS VOLTAE 54-91 PROTEIN D PMDH.sub.-- ECOLI MALATE DEHYDROGENASE ESCHERICHIA COLI 127-154 PMDH.sub.-- METFE MALATE DEHYDROGENASE METHANOTHERMUS FERVIDUS 54-88 PMDH.sub.-- SALTY MALATE DEHYDROGENASE SALMONELLA TYPHIMURIUM 127-154 PMDL.sub.-- ECOLI MDL PROTEIN ESCHERICHIA COLI 464-491 684-711 992-1019 PMDOH.sub.-- ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI 119-152 MDOH PMECI.sub.-- STAEP METHICILLIN RESIS REG STAPHYLOCOCCUS EPIDERMIDIS & 88-122 PROTEIN MECI AUREUS PMECR.sub.-- STAEP METHICILLIN RESISTANCE STAPHYLOCOCCUS EPIDERMIDIS & 439-495 546-573 MECRI PROTEIN AUREUS PMEMB.sub.-- METCA METHANE MONOOXYGENASE METHYLOCOCCUS CAPSULATUS 214-248 COMPONENT A PMEMB.sub.-- METTR METHANE MONOOXYGENASE METHYLOCOCCUS 321-348 COMPONENT A TRICHOSPORIUM PMEND.sub.-- ECOLI SHCHC SYNTHASE ESCHERICHIA COLI 333-367 PMER4.sub.-- STRLI PROBABLE HG TRANSPORT STREPTOMYCES LIVIDANS 159-186 PROTEIN PMERA.sub.-- BACSR MERCURIC REDUCTASE BACILLUS SP 146-180 PMERA.sub.-- STAAU MERCURIC REDUCTASE STAPHYLOCOCCUS AUREUS 292-347 352-386 PMERR.sub.-- STAAU MERCURIC RESISTANCE STAPHYLOCOCCUS AUREUS 86-113 OPERON REG PROTEIN PMETB.sub.-- ECOLI CYSTATHIONINE GAMMA- ESCHERICHIA COLI 356-383 SYNTHASE PMETC.sub.-- ECOLI CYSTATHIONINE BETA- ESCHERICHIA COLI 363-390 LYASE PMETC.sub.-- SALTY CYSTATHIONINE BETA- SALMONELLA TYPHIMURIUM 2-29 LYASE PMETE.sub.-- ECOLI METHIONINE SYNTHASE ESCHERICHIA COLI 448-482 PMETH.sub.-- ECOLI METHIONINE SYNTHASE ESCHERICHIA COLI 371-398 642-676 PMFD.sub.-- ECOLI TRANSCRIPTION-REPAIR ESCHERICHIA COLI 185-212 COUPLING FACTOR PMGLA.sub.-- ECOLI GALACTOSIDE-BINDING ESCHERICHIA COLI 62-89 312-380 PROTEIN PMINC.sub.-- BACSU SEPTUM SITE-DETERMINING BACILLUS SUBTILIS 62-122 PROTEIN MINC PMIOC.sub.-- ECOLI MIOC PROTEIN ESCHERICHIA COLI 102-129 PM1P.sub.-- CHLTR 27 KD MEMBRANE PROTEIN CHLAMYDIA TRACHOMATIS 41-75 PRECURSOR PM1P.sub.-- LEGMI OUTER MEMBRANE PROTEIN LEGIONELLA MICDADEI 106-133 MIP PRECURSOR PMLS1.sub.-- ENTFA RRNA ADENINE N-6-METHYL- ENTEROCOCCUS FAECALIS 4-81 120-154 TRANSFERASE PMLS1.sub.-- STAAU RRNA ADENINE N-6-METHYL- STAPHYLOCOCCUS AUREUS 9-47 TRANSFERASE PMLS2.sub.-- ENTFA RRNA ADENINE N-6-METHYL- ENTEROCOCCUS FAECALIS 4-81 120-154 TRANSFERASE PMLSB.sub.-- BACFR RRNA ADENINE N-6-METHYL- BACTEROIDES FRAGILIS 16-43 TRANSFERASE PMLSB.sub.-- ECOLI RRNA ADENINE N-6-METHYL- ESCHERICHIA COLI 4-81 120-154 TRANSFERASE PMLSB.sub.-- STRPN RRNA ADENINE N-6-METHYL- STREPTOCOCCUS PNEUMONIAE 4-81 120-154 TRANSFERASE PMLSB.sub.-- STRSA RRNA ADENINE N-6-METHYL- STREPTOCOCCUS SANGUIS 4-81 120-154 TRANSFERASE PMLSC.sub.-- BACFR RRNA ADENINE N-6-METHYL- BACTEROIDES FRAGILIS 16-43 TRANSFERASE PMMOB.sub.-- METC METHANE MONOOXYGENASE METHYLOCOCCUS CAPSULATUS 34-64 REG PROTEIN B PMOAB.sub.-- ECOLI MOLYBD COFAC BIOSYN ESCHERICHIA COLI 49-76 PROTEIN B PMOBA.sub.-- THIFE MOBA PROTEIN THIOBACILLUS FERROOXIDANS 94-121 251-278 PMOBC.sub.-- THIFE MOBC PROTEIN THIOBACILLUS FERROOXIDANS 20-47 PMOBD.sub.-- THIFE MOBC PROTEIN THIOBACILLUS FERROOXIDANS 95-132 PMOB.sub.-- ECOLI MOB PROTEIN ESCHERICHIA COLI 45-72 PMOEA.sub.-- ECOLI MOLYBDOPTERIN BIO- ESCHERICHIA COLI 243-270 SYNTHESIS MOEA PROTEIN PMOP1.sub.-- CLOPA MOLYBDENUM-PTERIN CLOSTRIDIUM PASTEURIANUM 26-53 BINDING PROTEIN I PMOP2.sub.-- CLOPA MOLYBDENUM-PTERIN CLOSTRIDIUM PASTEURIANUM 26-64 BINDING PROTEIN II PMOXY.sub.-- PARDE METHANOL UTIL CONT PARACOCCUS DENITRIFICANS 200-234 307-334 PROTEIN MOXY PMPEU.sub.-- SYNPY BILIN BIOSYNTHESIS SYNECHOCOCCUS SP 2-36 80-107 198-225 PROTEIN MPEU PMPEV.sub.-- SYNPY BILIN BIOSYNTHESIS SYNECHOCOCCUS SP 2-31 175-216 PMPRA.sub.-- ECOLI MPRA PROTEIN ESCHERICHIA COLI 136-163 PMRAY.sub.-- BACSU PENTAPEPTIDE- BACILLUS SUBTILIS 106-133 247-281 TRANSFERASE PMREB.sub.-- BACCE ROD SHAPE-DETERMINING BACILLUS CEREUS 186-213 PROTEIN MREB PMREC.sub.-- BACSU ROD SHAPE-DETERMINING BACILLUS SUBTILIS 65-112 PROTEIN MREC PMRKB.sub.-- KLEPN CHAPERONE PROTEIN MRKB KLEBSIELLA PNEUMONIAE 198-232 PRECURSOR PMRKC.sub.-- KLEPN MRKC PROTEIN PRECURSOR KLEBSIELLA PNEUMONIAE 55-82 452-489 592-622 PMRKD.sub. -- KLEPN FIMBRIA ADHESION PROTEIN KLEBSIELLA PNEUMONIAE 222-268 PRECURSOR PMRKE.sub.-- KLEPN MRKE PROTEIN KLEBSIELLA PNEUMONIAE 193-220 PMRP4.sub.-- STRPY FIBRINOGEN-/IG-BINDING STREPTOCOCCUS PYOGENES 7-46 99-310 PROTEIN PRECURSOR PMRP.sub.-- STRSU MURAMIDASE-RELEASED STREPTOCOCCUS SUIS 75-102 130-177 261-291 421-448 507-534 588-622 773-800 1058-1085 PROTEIN PRECURSOR PMSBA.sub.-- ECOLI PROB ATP-BINDING ESCHERICHIA COLI 116-150 412-449 TRANSPORT PROTEIN MSBA PMSRA.sub.-- STAEP ERYTHROMYCIN RESISTANCE STAPHYLOCOCCUS EPIDERMIDIS 174-223 323-350 PROTEIN PMSYB.sub.-- ECOLI ACIDIC PROTEIN MSYB ESCHERICHIA COLI 73-100 PMT57.sub.-- ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI 250-284 474-544 ECO571 PMTA1.sub.-- ACICA MODIFICATION METHYLASE ACINETOBACTER CALCOACETICUS 503-540 ACCI PMTAB.sub.-- SYNP2 MODIFICATION METHYLASE SYNECHOCOCCUS SP 19-46 AQUI BETA SUBUNIT PMTB1.sub.-- BREEP MODIFICATION METHYLASE BREVIBACTERIUM EPIDERMIDIS 166-200 309-336 BEPI PMTB1.sub.-- HERAU MODIFICATION METHYLASE HERPETOSIPHON AURANTIACUS 281-308 HGIBI PMTB2.sub.-- BACAM MODIFICATION METHYLASE BACILLUS AMYLOLIQUEFACIENS 35-62 BAMHII PMTB3.sub.-- BACAR MODIFICATION METHYLASE BACILLUS ANEURINOLYTICUS 184-211 BANIII PMTBA.sub.-- BACAR MODIFICATION METHYLASE BACILLUS ANEURINOLYTICUS 121-148 382-409 BANI PMTBB.sub.-- BACSU MODIFICATION METHYLASE BACILLUS SUBTILIS 231-258 467-496 BSUBI PMTBF.sub.-- BACSU MODIFICATION METHYLASE BACILLUS SUBTILIS 208-235 BSUFI PMTC1.sub.-- CITFR MODIFICATION METHYLASE CITROBACTER FREUNDII 2-36 55-82 252-279 CFRBI PMTC1.sub.-- HERAU MODIFICATION METHYLASE HERPETOSIPHON AURANTIACUS 120-147 HGICI PMTC2.sub.-- HERAU MODIFICATION METHYLASE HERPETOSIPHON AURANTIACUS 281-311 HGICII PMTE1.sub.-- ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI 76-110 145-172 ECORI PMTE1.sub.-- HERAU MODIFICATION METHYLASE HERPETOSIPHON AURANTIACUS 281-308 HGIEI PMTE2.sub.-- ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI 4-61 ECORII PMTE5.sub.-- ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI 73-100 ECO RV PMTEC.sub.-- ENTCL MODIFICATION METHYLASE ENTEROBACTER CLOACAE 418-445 ECIA PMTF1.sub.-- FLAOK MODIFICATION METHYLASE FLAVOBACTERIUM OKEANOKOITES 184-211 279-306 337-366 398-425 555-646 FOKI PMTF1.sub.-- FUSNU MODIFICATION METHYLASE FUSOBACTERIUM NUCLEATUM 22-49 FNUDI PMTG2.sub.-- HAEGA MODIFICATION METHYLASE HAEMOPHILUS GALLINARUM 135-165 HGAI-2 PMTH2.sub.-- HAEIN MODIFICATION METHYLASE HAEMOPHILUS INFLUENZAE 181-208 399-426 HINCII PMTHZ.sub.-- METTF MODIFICATION METHYLASE METHANOBACTERIUM 188-215 296-323 MTHZI THERMOFORMICICUM PMTK1.sub.-- KLEPN MODIFICATION METHYLASE KLEBSIELLA PNEUMONIAE 270-297 KPNI PMTLD.sub.-- STRMU MANNITOL-1-PHOSPHATE 5- STREPTOCOCCUS MUTANS 39-66 224-258 349-376 DEHYDROGE NASE PMTM1.sub.-- MORSP MODIFICATION METHYLASE MORAXELLA SP 5-39 49-104 MSPI PMTN3.sub.-- NEILA MODIFICATION METHYLASE NEISSERIA LACTAMICA 124-158 183-210 NLAIII PMTP2.sub.-- PROVU MODIFICATION METHYLASE PROTEUS VULGARIS 308-335 PVU II PMTPG.sub.-- SULAC MEMBRANE-ASSOCIATED SULFOLOBUS ACIDOCALDARIUS 9-67 ATPASE PMTPS.sub.-- PROST MODIFICATION METHYLASE PROVIDENCIA STUARTII 226-264 PSTI PMTR.sub.-- ECOLI TRYPTOPHAN-SPECIFIC ESCHERICHIA COLI 80-107 TRANSPORT PROTEIN PMTS1.sub.-- STRSA MODIFICATION METHYLASE STREPTOCOCCUS SANGUIS 116-153 434-461 600-645 STSI PMTS2.sub.-- SHISO MODIFICATION METHYLASE SHIGELLA SONNEI 81-108 SSOII PMTS9.sub.-- STAAU MODIFICATION METHYLASE STAPHYLOCOCCUS AUREUS 233-274 SAU96I PMTSA.sub.-- LACLC MODIFICATION METHYLASE LACTOCOCCUS LACTIS 88-115 187-214 SCRFI-A PMTSB.sub.-- LACLC MODIFICATION METHYLASE LACTOCOCCUS LACTIS 27-61 SCRFI-B PMTS1.sub.-- SPISQ CPG DNA METHYLASE SPIROPLASMA SP 188-230 256-290 PMTSM.sub.-- SERMA MODIFICATION METHYLASE SERRATIA MARCESCENS 61-88 SMAI PMTT8.sub.-- THETH MODIFICATION METHYLASE THERMUS AQUATICUS 120-157 TTHHB8I PMTV1.sub.-- VIBS3 MODIFICATION METHYLASE VIBRIO SP 23-66 VSPI PMUKB.sub.-- ECOLI MUKB PROTEIN ESCHERICHIA COLI 320-381 1014-1048 1216-1252 PMULI.sub.-- ERWAM MAJOR OUTER MEMBRANE ERWINIA AMYLOVORA 24-54 LIPOPROTEIN PREC PMULI.sub.-- MORMO MAJOR OUTER MEMBRANE MORGANELA MORGANII 27-54 LIPOPROTEIN PREC PMULI.sub.-- PROMI MAJOR OUTER MEMBRANE PROTEUS MIRABILIS 21-63 LIPOPROTEIN PREC PMURD.sub.-- BACSU UDP-LIGASE BACILLUS SUBTILIS 101-132 299-326 PMURE.sub.-- ECOLI LIGASE ESCHERICHIA COLI 107-134 PMURF.sub.-- ECOLI UDP-MURNAC-PENTAPEPTIDE ESCHERICHIA COLI 407-437 SYNTHETASE PMURZ.sub.-- ECOLI ENOYLPYRUVATE ESCHERICHIA COLI 392-419 TRANSFERASE PMURZ.sub.-- ENTCL ENOYLPYRUVATE ENTEROBACTER CLOACAE 392-419 TRANSFERASE PMUTA.sub.-- STRCM METHYLMALONYL-COA STREPTOMYCES CINNAMONENSIS 31-58 MUTASE BETA-SUBUNIT PMUTB.sub.-- PROFR METHYLMALONYL-COA PROPIONIBACTERIUM 549-576 MUTASE ALPHA-SUBUNIT FREUDENREICHII PMUTB.sub.-- SALTY /G-SPECIFIC ADENINE SALMONELLA TYPHIMURIUM 273-300 GLYCOSYLASE PMUTB.sub.-- STRCM METHYLMALONYL-COA STREPTOMYCES CINNAMONENSIS 481-508 MUTASE ALPHA-SUBUNIT PMUTL.sub.-- ECOLI DNA MISMATCH REPAIR ESCHERICHIA COLI 80-114 PROTEIN MUTL PMUTL.sub.-- SALTY DNA MISMATCH REPAIR SALMONELLA TYPHIMURIUM 80-114 PROTEIN MUTL PMUTL.sub.-- VIBCH PROTEIN MUTL VIBRIO CHOLERAE 134-169 PMUTS.sub.-- ECOLI DNA MISMATCH REPAIR ESCHERICHIA COLI 119-153 PROTEIN MUTS PMUTT.sub.-- STRAM MUTT-LIKE PROTEIN STREPTOMYCES AMBOFACIENS 60-87 PMVAA.sub.-- PSEMV COENZYME A REDUCTASE PSEUDOMONAS MEVALONII 341-368 PMX.sub.-- STRPY M-RELATED PROTEIN STREPTOCOCCUS PYOGENES 5-129 148-182 190-217 240-301 PRECURSOR PMYCO.sub.-- STRCI MYCOLYSIN PRECURSOR STREPTOMYCES CACAOI 300-352 PMYFC.sub.-- YEREN MYFC PROTEIN PRECURSOR YERSINIA ENTEROCOLITICA 210-237 PNADC.sub.-- SALTY NICOTINATE-NUCLEOTIDE SALMONELLA TYPHIMURIUM 123-154 255-289 PYROPHOSPHORYLASE PNADR.sub.-- SALTY TRANSCRIPTIONAL SALMONELLA TYPHIMURIUM 233-260 REGULATOR NADR PNAGD.sub.-- ECOLI NAGD PROTEIN ESCHERICHIA COLI 75-102 PNAGH.sub.-- CLOPE HYALURONOGLUCOS- CLOSTRIDIUM PERFRINGENS 48-75 990-1017 AMINIDASE PNAGR.sub.-- ECOLI NAGR PROTEIN ESCHERICHIA COLI 119-153 PNANH.sub.-- CLOSE SIALIDASE PRECURSOR CLOSTRIDIUM SEPTICUM 11-42 289-330 922-988 PNANH.sub.-- CLOSO SIALIDASE PRECURSOR CLOSTRIDIUM SORDELLII 377-404 PNANH.sub.-- SALTY SIALIDASE SALMONELLA TYPHIMURIUM 290-317 PNAPA.sub.- - ENTHR NA(+)/H(+) ANTIPORTER ENTEROCOCCUS HIRAE 116-150 PNARG.sub.-- ECOLI RESPIRATORY NITRATE ESCHERICHIA COLI 386-420 REDUCTASE ALPHA CHAIN PNARL.sub.-- ECOLI REGULATOR PROTEIN NARL ESCHERICHIA COLI 76-103 PNARP.sub.-- ECOLI REGULATOR PROTEIN NARP ESCHERICHIA COLI 155-189 PNARX.sub.-- ECOLI NITRATE/NITRITE SENSOR ESCHERICHIA COLI 220-247 431-458 505-538 PROTEIN NARX PNDVA.sub.-- RHIME BETA-(1.rarw.2)GLUCAN EXPORT RHIZOBIUM MELILOTI 212-239 PROTEIN PNEOR.sub.-- STRCY NEOMYCIN RESISTANCE STREPTOMYCES CYANOGENUS 348-375 PROTEIN PNEUA.sub.-- ECOLI ACYLNEURAMINATE ESCHERICHIA COLI 218-252 268-298 CYTITYLYLTRANSFERASE PNFRA.sub.-- ECOLI N4 ADSORPTION PROTEIN A ESCHERICHIA COLI 490-517 PRECURSOR PNFRB.sub.-- ECOLI N4 ADSORPTION PROTEIN B ESCHERICHIA COLI 2-43 186-220 511-538 PNFRC.sub.-- ECOLI N4 ADSORPTION PROTEIN C ESCHERICHIA COLI 315-342 PNFSI.sub.-- ENTCL NAD(P)H NITROREDUCTASE ENTEROBACTER CLOACAE 9-36 PNHAA.sub.-- ECOLI NA(+)/H(+) ANTIPORTER 1 ESCHERICHIA COLI 206-233 PNHAB.sub.-- ECOLI NA(+)/H(+) ANTIPORTER 2 ESCHERICHIA COLI 271-305 PNHAB.sub.-- PSECL NITRILE HYDRATASE PSEUDOMONAS CHLORORAPHIS 71-101 SUBUNIT BETA PNHB1.sub.-- RHORH NITRILE HYDRATASE RHODOCOCCUS RHODOCHROUS 63-93 SUBUNIT BETA PNIFA.sub.-- AZOBR NIF-SPECIFIC REGULATORY AZOSPIRILLUM BRASILENSE 7-44 PROTEIN PNIFA.sub.-- BRAJA NIF-SPECIFIC REGULATORY BRADYRHIZOBIUM JAPONICUM 252-279 PROTEIN PNIFA.sub.-- HERSE NIF-SPECIFIC REGULATORY HERBASPIRILLUM SEROPEDICAE 9-51 162-203 327-354 PROTEIN PNIFA.sub.-- RHILE NIF-SPECIFIC REGULATORY RHIZOBIUM LEGUMINOSARUM 100-127 PROTEIN PNIFA.sub.-- RHIME NIF-SPECIFIC REGULATORY RHIZOBIUM MELILOTI 171-198 PROTEIN PNIFA.sub.-- RHOCA NIF-SPECIFIC REGULATORY RHODOBACTER CAPSULATUS 260-287 PROTEIN PNIFB.sub.-- AZOVI NIFB PROTEIN AZOTOBACTER VINELANDII 342-369 PNIFB.sub.-- KLEPN NIFB PROTEIN KLEBSIELLA PNEUMONIAE 154-181 PNIFD.sub.-- ANASP NITROG MOLYBD-IRON ANABAENA SP 374-401 PROTEIN PNIFD.sub.-- AZOBR NITROG MOLYBD-IRON AZOSPIRILLUM BRASILENSE 377-404 PROTEIN PNIFD.sub.-- PLEBO NITROG MOLYBD-IRON PLECTONEMA BORYANUM 387-414 PROTEIN PNIFD.sub.-- THIFE NITROG MOLYBD-IRON THIOBACILLUS FERROOXIDANS 383-410 PROTEIN PNIFE.sub.-- CLOPA BIOSYNTHESIS PROTEIN NIFE CLOSTRIDIUM PASTEURIANUM 359-386 PNIFH.sub.-- FRAGR NITROGENASE IRON PROTEIN FRANKIA SP 56-83 PNIFH.sub.-- PLEBO NITROGENASE IRON PROTEIN PLECTONEMA BORYANUM 267-294 PNIFK.sub.-- AZOBR NITROG MOLYBD-IRON AZOSPIRILLUM BRASILENSE 430-457 PROTEIN PNIFK.sub.-- BRAJA NITROG MOLYBD-IRON BRADYRHIZOBIUM JAPONICUM 483-510 PROTEIN PNIFK.sub.-- BRASP NITROG MOLYBD-IRON BRADYRHIZOBIUM SP 478-505 PROTEIN PNIFK.sub.-- CLOPA NITROG MOLYBD-IRON CLOSTRIDIUM PASTEURIANUM 227-254 PROTEIN PNIFK.sub.-- THIFE NITROG MOLYBD-IRON THIOBACILLUS FERROOXIDANS 479-506 PROTEIN PNIFM.sub.-- AZOCH NIFM PROTEIN AZOTOBACTER CHROOCOCCUM 265-292 MCD 1 PNIFN.sub.-- BRAJA BIOSYNTHESIS PROTEIN BRADYRHIZOBIUM JAPONICUM 339-366 NIFN PNIFS.sub.-- ANASP NIFS PROTEIN ANABAENA SP 112-139 PNIFS.sub.-- LACDE NIFS PROTEIN HOMOLOG LACTOBACILLUS DELBRUECKII 59-86 PNIFT.sub.-- AZOVI NIFT PROTEIN AZOTOBACTER VINELANDII 6-33 PNIFU.sub.-- ANASL NIFU PROTEIN ANABAENA SP 7-49 PNIFU.sub.-- ANASP NIFU PROTEIN ANABAENA SP 148-178 PNIFU.sub.-- KLEPN NIFU PROTEIN KLEBSIELLA PNEUMONIAE 66-93 PNIKA.sub.-- ECOLI NICKEL TRANSPORT PROTEIN ESCHERICHIA COLI 122-149 282-309 456-483 NIKA PRECURSOR PNIKE.sub.-- ECOLI NICKEL TRANSPORT PROTEIN ESCHERICHIA COLI 177-204 NIKE PNIRB.sub.-- ECOLI NITRITE REDUCTASE ESCHERICHIA COLI 54-81 345-372 PNIRC.sub.-- ECOLI NIRC PROTEIN ESCHERICHIA COLI 212-239 PNIRS.sub.-- PSEST PSEUDOMONAS CYTO- PSEUDOMONAS STUTZERI 303-333 CHROME OXIDASE PRECURSO PNISB.sub.-- LACLA 117 KD MEMBRANE LACTOCOCCUS LACTIS 202-229 287-332 663-697 886-902 ASSOCIATED PROTEIN PNISC.sub.-- LACLA NISIN BIOSYNTHESIS LACTOCUCCUS LACTIS 52-92 140-188 PROTEIN NISC PNIST.sub.-- LACLA NISIN TRANSPORT PROTEIN LACTOCOCCUS LACTIS 223-257 278-305 426-470 NIST PNIVA.sub.-- CLOPA HOMOCITRATE SYNTHASE, CLOSTRIDIUM PASTEURIANUM 100-127 234-268 ALPHA SUBUNIT PNIVO.sub.-- CLOPA HOMOCITRATE SYNTHASE, CLOSTRIDIUM PASTEURIANUM 63-94 103-132 213-240 283-310 OMEGA SUBUNIT PNMPC.sub.-- ECOLI PORIN PROTEIN NMPC ESCHERICHIA COLI 22-49 69-96 335-362 PRECURSOR PNODC.sub.-- BRASP NODULATION PROTEIN C BRADYRHIZOBIUM SP 3--30 PNODC.sub.-- RHILO NODULATION PROTEIN C RHIZOBIUM LOTI 286-313 PNODC.sub.-- RHILT NODULATION PROTEIN C RHIZOBIUM LEGUMINOSARUM 14-48 PNODF.sub.-- RHILV NODULATION PROTEIN F RHIZOBIUM LEGUMINOSARUM 31-58 PNODF.sub.-- RHIMS NODULATION PROTEIN F RHIZOBIUM MELILOTI 39-66 PNODG.sub.-- RHIME NODULATION PROTEIN G RHIZOBIUM MELILOTI 8-35 PNODG.sub.-- RHIMS NODULATION PROTEIN G RHIZOBIUM MELILOTI 8-35 PNODL.sub.-- RHILV NODULATION PROTEIN L RHIZOBIUM LEGUMINOSARUM 26-53 PNODQ.sub.-- AZOBR NODULATION PROTEIN Q AZOSPIRILLUM BRASILENSE 60-87 PNODT.sub.-- RHILT NODULATION PROTEIN T RHIZOBIUM LEGUMINOSARUM 104-134 355-382 420-454 PNODT.sub.-- RHILV NODULATION PROTEIN T RHIZOBIUM LEGUMINOSARUM 364-391 416-443 PNODU.sub.-- RHIFR NODULATION PROTEIN U RHIZOBIUM FREDII 506-536 PNODV.sub.-- BRAJA NODULATION PROTEIN V BRADYRHIZOBIUM JAPONICUM 378-419 739-766 PNODX.sub.-- RHILV NODULATION PROTEIN X RHIZOBIUM LEGUMINOSARUM 232-259 PNOLB.sub.-- RHIFR NODULATION PROTEIN NOLB RHIZOBIUM FREDII 133-160 PNOLR.sub.-- RHIME NODULATION PROTEIN NOLR RHIZOBIUM MELILOTI 88-115 PNOSD.sub.-- PSEST NOSD PROTEIN PRECURSOR PSEUDOMONAS STUTZERI 319-346 PNOSR.sub.-- PSEST REGULATORY PROTEIN NOSR PSEUDOMONAS STUTZERI 127-154 PNOSZ.sub.-- PSEAE NITROUS-OXIDE REDUCTASE PSEDOMONAS AERUGINOSA 267-294 PRECURSOR PNOSZ.sub.-- PSEST NITROUS-OXIDE REDUCTASE PSEUDOMONAS STATZERI 557-591 PRECURSOR PNPRE.sub.-- BACAM BACILLOLYSIN PRECURSOR BACILLUS AMLOLIQUEFACIENS 113-147 217-244 PNPRE.sub.-- BACPO BACILLOLYSIN PRECURSOR BACILLUS POLYMYXA 57-91 187-228 PNPRE.sub.-- BACSU BACILLOLYSIN PRECURSOR BACILLUS SUBTILIS 116-146 307-334 PNQO5.sub.-- PARDE NADH-UBIQUINONE PARACOCCUS DENITRIFICANS 4-45 OXIDOREDUCTASE 21 KD CHAI PNQO9.sub.-- PARDE NADH-UBIQUINONE PARACOCCUS DENITRIFICANS 125-152 OXIDOREDUC 20 KD CHAIN PNRDD.sub.-- ECOLI ANNAER RIBONUC-TRIPHOS ESCHERICHIA COLI 91-125 REDUCTASE PNRFA.sub.-- ECOLI CYTOCHROME C552 ESCHERICHIA COLI 319-346 PRECURSOR PNRFG.sub.-- ECOLI NRFG PROTEIN ESCHERICHIA COLI 72-111 PNRL1.sub.-- RHORH ALIPHATIC NITRILASE RHODOCOCCUS RHODOCHROUS 109-136 PNSR.sub.-- LACLA NISIN-RESISTANCE PROTEIN LACTOCOCCUS LACTIS 52-79 135-162 PNTCA.sub.-- ANASP DNA-BINDING PROTEIN VF1 ANABAENA SP 65-92 PNTCA.sub.-- SYNP7 GLOBAL NITROGEN SYNECHOCOCCUS SP 44-91 REGULATOR PNTCA.sub.-- SYNP3 GLOBAL NITROGEN SYNECHOCYSTIS SP 67-94 REGULATOR PNTRB.sub.-- VIBAL NITROGEN REGULATION VIBRIO ALGINOLYTICUS 194-223 PROTEIN NTRB PNTRC.sub.-- PROVU NITROGEN REGULATION PROTEUS VULGARIS 385-412 PROTEIN NR PNTRC.sub.-- RHIME NITROGEN ASSIMILATION RHIZOBIUM MELILOTI 451-478 REGULATORY PROTEIN PNU2C.sub.-- SYNP7 NADH-PLASTOQUINONE SYNECHOCOCCUS SP 80-107 OXIDOREDUCTASE CHAIN PNU4C.sub.-- SYNY3 NADH-PLASTOQUINONE SYNECHOCYSTIS SP 27-54 OXIDOREDUCTASE CHAIN PNU5C.sub.-- SYNP2 NADH-PLASTOQUINONE SYNECHOCOCCUS SP 614-641 OXIDOREDUCTASE CHAIN PNUJC.sub.-- SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTIS SP 163-190 OXIDOREDUCTASE SUBU PNUKC.sub.-- SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTIS SP 169-199 OXIDOREDUCTASE SUBU PNULX.sub.-- SYNY3 NADH-PLASTOQUINONE SYNECHOCYSTIS SP 46-80 OXIDOREDUCTASE CHAIN PNUOG.sub.-- ECOLI NADH DEHYDROGENASE I ESCHERICHIA COLI 368-402 CHAIN G PNUOL.sub.-- ECOLI NADH DEHYDROGENASE I ESCHERICHIA COLI 30-57 496-523 CHAIN L PNUON.sub.-- ECOLI NADH DEHYDROGENASE I ESCHERICHIA COLI 392-419 CHAIN N PNUPC.sub.-- ECOLI NUCLEOTIDE PERMEASE ESCHERICHIA COLI 13-43 134-164 356-385 PNUSA.sub.-- ECOLI NUSA PROTEIN ESCHERICHIA COLI 21-62 PNUSB.sub.-- ECOLI N UTILIZATION SUBSTANCE ESCHERICHIA COLI 17-65 70-97 PROTEIN B PNUSG.sub.-- ECOLI TRANSCRIPTION ANTI- ESCHERICHIA COLI 141-168 TERMINATION PROTEIN NUS PNUSG.sub.-- THEMA TRANSCRIPTION ANTI- THERMOTOGA MARITIMA 203-230 TERMINATION PROTEIN NUS PNYLB.sub.-- FLASP 6-AMINOHEXANOATE-DIMER FLAVOBACTERIUM SP 223-250 HYDROLASE PNYLC.sub.-- FLASP 6-AMINOHEXANOATE-DIMER FLAVOBACTERIUM SP 223-250 HYDROLASE PO16G.sub.-- BACCE OLIGO-1,6-GLUCOSIDASE BACILLUS CEREUS 301-328 POCCT.sub.-- AGRT6 OCTOPINE-BINDING PROTEIN AGROBACTERIUM TUMEFACIENS 172-202 T PRECURSOR PODO1.sub.-- AZOVI 2-OXOGLUTARATE AZOTOBACTER VINELANDII 829-856 DEHYDROGENASE E1 COMPONE PODO1.sub.-- BACSU 2-OXOGLUTARATE BACILLUS SUBTILIS 487-524 809-850 DEHYDROGENASE E1 COMPONE PODO1.sub.-- ECOLI 2-OXOGLUTARATE ESCHERICHIA COLI 6-33 DEHYDROGENASE E1 COMPONE PODO2.sub.-- BACSU DIHYDROLIPOAMIDE SUC- BACILLUS SUBTILIS 30-60 TRANSF COMP PODOB.sub.-- PSEPU 2-OXOGLUTARATE PSEUDOMONAS PUTIDA 223-254 DEHYDROGENASE E1 COMPONE PODP1.sub.-- ECOLI PYRUVATE DEHYDRO- ESCHERICHIA COLI 624-651 GENASE E1 COMPONENT PODP2.sub.-- AZOVI DIHYDROLIPOAMIDE AZOTOBACTER VINELANDII 518-545 ACETRANS COMP PODP2.sub.-- ECOLI DIHYDROLIPOAMIDE ESCHERICHIA COLI 14-41 117-144 ACETRANS COMP PODPA.sub.-- BACST PYRUVATE DEHYDRO- BACILLUS STEAROTHERMOPHILUS 299-333 GENASE E1 COMPONENT PODPA.sub.-- BACSU PYRUVATE DEHYDRO- BACILLUS SUBTILIS 305-332 GENASE E1 COMPONENT PODPB.sub.-- BACST PYRUVATE DEHYDRO- BACILLUS STEAROTHERMOPHILUS 23-50 GENASE E1 COMPONENT PODPB.sub.-- BACSU PYRUVATE DEHYDRO- BACILLUS SUBTILIS 16-50 GENASE E1 COMPONENT POM1E.sub.-- CHLTR 15 KD CYSTEINE-RICH CHLAMYDIA TRACHOMATIS 38-65 PROTEIN, SEROVAR E POMA1.sub.-- NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE 63-90 P1 A PRECURSOR POMA1.sub.-- NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS 359-386 P1 A PRECURSOR PNUJC.sub.-- SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTIS SP 163-190 OXIDOREDUCTASE SUBU PNUKC.sub.-- SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTIS SP 169-199 OXIDOREDUCTASE SUBU PNULX.sub.-- SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTIS SP 46-80 OXIDOREDUCTASE SUBU PNUOG.sub.-- ECOLI NADH DEHYDROGENASE I ESCHERICHIA COLI 368-402 CHAIN G PNUOL.sub.-- ECOLI NADH DEHYDROGENASE I ESCHERICHIA COLI 30-57 496-523 CHAIN L PNUON.sub.-- ECOLI NADH DEHYDROGENASE I ESCHERICHIA COLI 392-419 CHAIN N PNUPC.sub.-- ECOLI NUCLEOTIDE PERMEASE ESCHERICHIA COLI 13-43 134-164 356-383 PNUSA.sub.-- ECOLI NUSA PROTEIN ESCHERICHIA COLI 21-62 PNUSB.sub.-- ECOLI N UTILIZATION SUBSTANCE ESCHERICHIA COLI 17-65 70-97 PROTEIN B PNUSG.sub.-- ECOLI TRANSCRIPTION ANTI- ESCHERICHIA COLI 141-168 TERMINATION PROTEIN NUS PNUSG.sub.-- THEMA TRANSCRIPTION ANTI- THERMOTOGA MARITIMA 203-230 TERMINATION PROTEIN NUS PNYLB.sub.-- FLASP 6-AMINOHEXANOATE-DIMER FLAVOBACTERIUM SP 223-250 HYDROLASE PNYLC.sub.-- FLASP 6-AMINOHEXANOATE-DIMER FLAVOBACTERIUM SP 223-250 HYDROLASE PO16G.sub.-- BACCE OLIGO-1,6-GLUCOSIDASE BACILLUS CEREUS 301-328 POCCT.sub.-- AGRT6 OCTOPINE-BINDING PROTEIN AGROBACTERIUM TUMEFACIENS 172-202 T PRECURSOR PODO1.sub.-- AZOVI 2-OXOGLUTARATE AZOTOBACTER VINELANDII 829-856 DEHYDROGENASE E1 COMPONE PODO1.sub.-- BACSU 2-OXOGLUTARATE BACILLUS SUBTILIS 487-524 809-850 DEHYDROGENASE E1 COMPONE PODO1.sub.-- ECOLI 2-OXOGLUTARATE ESCHERICHIA COLI 6-33 DEHYDROGENASE E1 COMPONE PODO2.sub.-- BACSU DIHYDROLIPOAMIDE SUC- BACILLUS SUBTILIS 30-60 TRANSF COMP PODOB.sub.-- PSEPU 2-OXOGLUTARATE PSEUDOMONAS PUTIDA 223-254 DEHYDROGENASE E1 COMPONE PODP1.sub.-- ECOLI PYRUVATE DEHYDRO- ESCHERICHIA COLI 624-651 GENASE E1 COMPONENT PODP2.sub.-- AZOVI DIHYDROLIPOAMIDE AZOTOBACTER VINELANDII 518-545 ACETRANS COMP PODP2.sub.-- ECOLI DIHYDROLIPOAMIDE ESCHERICHIA COLI 14-41 117-144 ACETRANS COMP PODPA.sub.-- BACST PYRUVATE DEHYDRO- BACILLUS STEAROTHERMOPHILUS 299-333 GENASE E1 COMPONENT PODPA.sub.-- BACSU PYRUVATE DEHYDRO- BACILLUS SUBTILIS 305-332 GENASE E1 COMPONENT PODPB.sub.-- BACST PYRUVATE DEHYDRO- BACILLUS STEAROTHERMOPHILUS 23-50 GENASE E1 COMPONENT PODPB.sub.-- BACSU PYRUVATE DEHYDRO- BACILLUS SUBTILIS 16-50 GENASE E1 COMPONENT POM1E.sub.-- CHLTR 15 KD CYSTEINE-RICH CHLAMYDIA TRACHOMATIS 38-65 PROTEIN, SEROVAR E POMA1.sub.-- NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE 63-90 PI.A PRECURSOR POMA1.sub.-- NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS 359-386 PI.A PRECURSOR POMA2.sub.-- NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS 353-380 PI.A PRECURSOR POMB1.sub.-- NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE 63-90 P.IB PRECURSOR POMB1.sub.-- NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS 63-90 P.IB PRECURSOR POMB2.sub.-- NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE 63-90 P.IB PRECURSOR POMB2.sub.-- NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS 63-90 P.IB PRECURSOR POMB3.sub.-- NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS 63-90 P.IB PRECURSOR POMB4.sub.-- NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS 24-51 63-90 P.IB PRECURSOR POMB.sub.-- NEILA OUTER MEMBRANE PROTEIN NEISSERIA LACTAMICA 116-143 P.IB PRECURSOR POMB.sub.-- NEISI OUTER MEMBRANE PROTEIN NEISSERIA SICCA 24-51 63-90 P.IB PRECURSOR POMLA.sub.-- ACTPL OUTER MEMBRANE LIPO- ACTINOBACILLUS 114-151 PROTEIN PRECURSOR PLEUROPNEUMONIAE POMP1.sub.-- HAEIN OUTER MEMBRANE PROTEIN HAEMOPHILUS INFLUENZAE 154-184 303-330 341-368 P1 PRECURSOR POMP2.sub.-- HAEIN OUTER MEMBRANE PROTEIN HAEMOPHILUS INFLUENZAE 16-71 220-254 326-353 P2 PRECURSOR POMP3.sub.-- NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE 14-41 P.III PRECURSOR POMP7.sub.-- STAAU 70 KD OUTER MEMBRANE STAPHYLOCOCCUS AUREUS 53-80 88-115 PROTEIN PRECURSOR POMPA.sub.-- THEMA OUTER MEMBRANE PROTEIN THERMOTOGA MARITIMA 100-138 151-178 183-249 255-292 301-328 351-385 ALPHA PRECURSOR POMPC.sub.-- ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI 20-47 64-94 C PRECURSOR POMPC.sub.-- NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE 89-123 P.IIC PRECURSOR POMPC.sub.-- SALTI OUTER MEMBRANE PROTEIN SALMONELLA TYPHI 166-193 C PRECURSOR POMPF.sub.-- ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI 21-55 231-258 F PRECURSOR POMPH.sub.-- PHOS9 OMPH PROTEIN PHOTOBACTERIUM SP 292-319 POMPT.sub.-- ECOLI PROTEASE VII PRECURSOR ESCHERICHIA COLI 37-64 POP65.sub.-- NEIGO OPACITY PROTEIN OPA65 NEISSERIA GONORRHOEAE 71-111 POP67.sub.-- NEIGO OPACITY PROTEIN OPA67 NEISSERIA GONORRHOEAE 72-109 POPAA.sub.-- NEIGO OPACITY PROTEIN OPA53 NEISSERIA GONORRHOEAE 71-123 140-167 POPAG.sub.-- NEIGO OPACITY PROTEIN OPA52 NEISSERIA GONORRHOEAE 80-107 140-167 POPAI.sub.-- NEIGO OPACITY PROTEIN OPA54 NEISSERIA GONORRHOEAE 80-107 POPAJ.sub.-- NEIGO OPACITY PROTEIN OPA58 NEISSERIA GONORRHOEAE 71-105 POPAK.sub.-- NEIGO OPACITY PROTEIN OPA57 NEISSERIA GONORRHOEAE 71-105 POPDA.sub.-- ECOLI OLIGOPEPTIDASE A ESCHERICHIA COLI 147-174 POPDA.sub.-- SALTY OLIGOPEPTIDASE A SALMONELLA TYPHIMURIUM 147-174 POPDE.sub.-- PSEAE TRANSCRIPTION FACTOR PSEUDOMONAS AUREGINOSA 64-91 OPDE POPPA.sub.-- ECOLI OLIGOPEPTIDE-BINDING ESCHERICHIA COLI 402-432 PROTEIN PRECURSOR POPPB.sub.-- SALTY OLIGOPEPTIDE PERMEASE SALMONELLA TYPHIMURIUM 265-299 PROTEIN OPPB POPR1.sub.-- NEIME OPACITY-RELATED PROTEIN NEISSERIA MENINGITIDIS 108-135 POMP1 POPR3.sub.-- NEIME OPACITY-RELATED PROTEIN NEISSERIA MENINGITIDIS 94-135 POMP3 POSMC.sub.-- ECOLI OSMOTICALLY INDUCIBLE ESCHERICHIA COLI 5-32 PROTEIN OSMC POSPA.sub.-- BORBU OUTER SURFACE PROTEIN A BORRELIA BURGDORFERI 63-100 112-139 157-204 223-271 PRECURSOR POSPB.sub.-- BORBU OUTER SURFACE PROTEIN B BORRELIA BURGDORFERI 113-259 262-296 PRECURSOR POTC2.sub.-- BACSU ORNITHINE CARBAMOYL- BACILLUS SUBTILIS 188-215 TRANSFERASE POTCC.sub.-- PSEAE ORNITHINE CARBAMOYL- PSEUDOMONAS AERUGINOSA 17-44 TRANSFERASE POTCC.sub.-- PSEPU ORNITHINE CARBAMOYL- PSEUDOMONAS PUTIDA 3-33 TRANSFERASE POUTB.sub.-- BACSU SPORE OUTGROWTH FACTOR BACILLUS SUBTILIS 225-252 B POUTO.sub.-- ERWCA LEADER PEPTIDASE ERWINIA CAROTOVORA 189-216 PP18K.sub.-- STRPA 18 KD PROTEIN IN FIMA STREPTOCOCCUS PARASANGUIS 115-149 3' REGION PP18K.sub.-- STRSA 18 KD PROTEIN IN SSAB STREPTOCOCCUS SANGUIS 10-37 114-148 3' REGION PP1P.sub.-- LACLC P1-TYPE PROTEINASE LACTOCOCCUS LACTIS 107-155 904-950 1073-1100 1223-1250 1466-1496 1625-1655 PRECURSOR PP29.sub.-- MYCHR PROTEIN P29 MYCOPLASMA HYORHINIS 5-56 101-160 202-246 PP2P.sub.-- LACLA PII-TYPE PROTEINASE LACTOCOCCUS LACTIS 107-155 904-950 1073-1100 1223-1250 1446-1496 1625-1689 PRECURSOR PP2P.sub.-- LACPA II-TYPE PROTEINASE LACTOBACILLUS PARACASEI 107-155 904-941 1073-1100 1223-1250 1446-1496 1628-1655 PRECURSOR PP30.sub.-- ECOLI P30 PROTEIN ESCHERICHIA COLI 55-82 PP34.sub.-- RICRI PROTEIN P34 RICKETTSIA RICKETTSII 9-47 135-173 PP37.sub.-- MYCHR PROTEIN P37 PRECURSOR MYCOPLASMA HYORHINIS 38-75 PP3P.sub.-- LACLC PIII-TYPE PROTEINASE LACTOCOCCUS LACTIS 107-155 904-950 1073-1100 1223-1250 1446-1496 1628-1655 PRECURSOR PP47K.sub.-- PSECL 47 KD PROTEIN PSEUDOMONAS CHLORORAPHIS 288-315 PP54.sub.-- ENTFC P54 PROTEIN PRECURSOR ENTEROCOCCUS FAECIUM 58-92 141-209 PP60.sub.-- LISGR PROTEIN P60 PRECURSOR LISTERIA GRAYI 31-61 101-142 300-334 431-458 PP60.sub.-- LISIN PROTEIN P60 PRECURSOR LISTERIA INNOCUA 67-94 102-143 PP60.sub.-- LISIV PROTEIN P60 PRECURSOR LISTERIA IVANOVII 101-140 315-359 PP60.sub.-- LISMO PROTEIN P60 PRECURSOR LISTERIA MONOCYTOGENES 103-144 PP60.sub.-- LISSE PROTEIN P60 PRECURSOR LISTERIA SEELIGERI 101-140 270-298 321-365 395-422 PP60.sub.-- LISWE PROETIN P60 PRECURSOR LISTERIA WELSHIMERI 113-140 317-361 396-423 PP69.sub.-- MYCHR PROTEIN P69 MYCOPLASMA HYORHINIS 264-295 421-464 487-517 544-575 PPABA.sub.-- BACSU ADC SYNTHASE BACILLUS SUBTILIS 12-41 PPABC.sub.-- BACSU 4-AMINO-4- BACILLUS SUBTILIS 250-277 DEOXYCHORISMATE LYASE PPABC.sub.-- ECOLI 4-AMINO-4- ESCHERICHIA COLI 140-167 DEOXYCHORISMATE LYASE PPABL.sub.-- STRGR PROTEIN Y STREPTOMYCES GRISEUS 52-79 PPAC.sub.-- ARTVI PENICILLIN ACYLASE ARTHROBACTER VISCOSUS 170-197 333-363 571-606 640-674 PRECURSOR PPAC.sub.-- BACSH PENICILLIN ACYLASE BACILLUS SPHAERICUS 232-259 PPAC.sub.-- STRMU PAC PROTEIN PRECURSOR STREPTOCOCCUS MUTANS 146-276 281-465 538-565 576-630 1075-1102 1159-1186 1381-1434 PPAI1.sub.-- BACSU REGULATORY PROTEIN PAI 1 BACILLUS SUBTILIS 103-137 PPAI2.sub.-- BACSU REGULATORY PROTEIN PAI 2 BACILLUS SUBTILIS 145-172 PPAPE.sub.-- ECOLI FIMBRIAL PROTEIN PAPE ESCHERICHIA COLI 42-69 86-123 PPAPF.sub.-- ECOLI MINOR FIMBRIAL PROTEIN ESCHERICHIA COLI 4-31 PAPF PPAPG.sub.-- ECOLI FIMBRIAL PROTEIN PAPG ESCHERICHIA COLI 282-316 PRECURSOR PPARA.sub.-- AGRTU PARA PROTEIN AGROBACTERIUM TUMEFACIENS 60-87 PPARB.sub.-- ECOLI PLASMID PARTITION PAR B ESCHERICHIA COLI 117-154 249-283 PROTEIN PPARE.sub.-- ECOLI TOPOISOMERASE IV SUBUNIT ESCHERICHIA COLI 444-471 526-553 B PPARE.sub.-- SALTY TOPOISOMERASE IV SUBUNIT SALMONELLA TYPHIMURIUM 444-471 526-553 B PPA.sub.-- BACAN PROTECTIVE ANTIGEN BACILLUS ANTHRACIS 13-52 125-152 296-335 585-615 650-684 PRECURSOR PPBP2.sub.-- ECOLI PENICILLIN-BINDING ESCHERICHIA COLI 95-122 178-205 207-241 PROTEIN 2 PPPB2.sub.-- NEIGO PENICILLIN-BINDING NEISSERIA GONORRHOEAE 193-220 PROTEIN 2 PPBP2.sub.-- NEIME PENICILLIN-BINDING NEISSERIA MENINGITIDIS 193-220 PROTEIN 2 PPBP2.sub.-- STRPN PENICILLIN-BINDING STREPTOCOCCUS PNEUMONIAE 144-183 216-243 259-286 605-632 PROTEIN 2B PPBP3.sub.-- ECOLI PENICILLIN-BINDING ESCHERICHIA COLI 224-251 334-368 PROTEIN 3 PRECURSOR PPBP4.sub.-- BACSU PENICILLIN-BINDING BACILLUS SUBTILIS 374-401 PROTEIN 4.degree. PPBP4.sub.-- ECOLI PENICILLIN-BINDING ESCHERICHIA COLI 336-363 PROTEIN 4 PRECURSOR PPBPA.sub.-- ECOLI PENICILLIN-BINDING ESCHERICHIA COLI 145-172 PROTEIN 1A PPBPB.sub.-- ECOLI PENICILLIN-BINDING ESCHERICHIA COLI 62-96 263-290 PROTEIN 1B PPBPX.sub.-- STRPN PENICILLIN-BINDING STREPTOCOCCUS PNEUMONIAE 89-116 706-733 PROTEIN 2X PPBP.sub.-- STAAU PENICILLIN-BINDING STAPHYLOCOCCUS AUREUS 78-108 176-203 263-324 502-529 PROTEIN PPCAB.sub.-- PSEPU CYCLOISOMERASE PSEUDOMONAS PUTIDA 115-142 226-253 PPEL3.sub.-- ERWCA PECTATE LYASE III ERWINIA CAROTOVORA 110-137 PRECURSOR PPELA.sub.-- ERWCA PECTATE LYASE A ERWINIA CAROTOVORA 110-137 PRECURSOR PPELB.sub.-- ERWCA PECTATE LYASE B ERWINIA CAROTOVORA 110-137 PRECURSOR PPELC.sub.-- ERWCA PECTATE LYASE C ERWINIA CAROTOVORA 110-137 PRECURSOR PPELF.sub.-- ERWCH PECTATE LYASE E ERWINIA CHRYSANTHEMI 40-67 209-243 PRECURSOR PPELP.sub.-- ERWCA PERIPLASMIC PECTATE ERWINIA CAROTOVORA 455-482 LYASE PRECURSOR PPELP.sub.-- YERPS PERIPLASMIC PECTATE YERSINIA PSEUDOTUBERCULOSIS 459-489 LYASE PRECURSOR PPELX.sub.-- ERWCA PUTATIVE PECTATE LYASE X ERWINIA CAROTOVORA 188-218 PRECURSOR PPELX.sub.-- ERWCH EXOPOLYGALACTURONATE ERWINIA CHRYSANTHEMI 466-493 LYASE PRECURSOR PPEPD.sub.-- ECOLI AMINOACYL-HISTIDINE ESCHERICHIA COLI 264-314 DIPEPTIDASE PPEPQ.sub.-- ECOLI X-PRO DIPEPTIDASE ESCHERICHIA COLI 251-278 PPERT.sub.-- BORBR PERTACTIN PRECURSOR BORDETELLA BRONCHISEPTICA 617-644 PPERT.sub.-- BORPA PERTACTIN PRECURSOR BORDETELLA PARAPERTUSSIS 628-655 PPERT.sub.-- BORPE PERTACTIN PRECURSOR BORDETELLA PERTUSSIS 616-643 PPGK.sub.-- CORGL PHOSPHOGLYCERATE CORYNEBACTERIUM GLUTMICUM 83-117 KINASE PPGK.sub.-- ECOLI PHOSPHOGLYCERATE ESCHERICHIA COLI 186-216 KINASE PPGK.sub.-- METBR PHOSPHOGLYCERATE METHANOBACTERIUM BRYANTII 36-63 KINASE PPGK.sub.-- THETH PHOSPHOGLYCERATE THERMUS AQUATICUS 222-249 KINASE PPGL1.sub.-- ERWCA ENDO-POLYGALACTURO- ERWINIA CAROTOVORA 237-271 NASE PRECURSOR PPGTE.sub.-- SALTY OUTER MEMBRANE SALMONELLA TYPHIMURIUM 66-93 PROTEASE E PRECURSOR PPHA1.sub.-- FREDI C-PHYCOCYANIN-1 ALPHA FREMYELLA DIPLOSIPHON 21-48 CHAIN PPHA2.sub.-- FREDI C-PHYCOCYANIN-2 ALPHA FREMYELLA DIPLOSIPHON 21-48 CHAIN PPHAA.sub.-- PSEOL POLY(3-HYDROXY- PSEUDOMONAS OLEOVORANS 264-291 ALKANOATE) POLYMERASE 1 PPHAB.sub.-- ANACY ALLOPHYCOCYANIN BETA ANABAENA CYLINDRICA 7-48 CHAIN PPHAB.sub.-- ANAVA ALLOPHYCOCYANIN BETA ANABAENA VARIABILIS 14-48 CHAIN PPHAB.sub.-- FREDI ALLOPHYCOCYANIN BETA FREMYELLA DIPLOSIPHON 8-49 CHAIN PPHAB.sub.-- MASLA ALLOPHYCOCYANIN BETA MASTIGOCLADUS LAMINOSUS 14-41 CHAIN PPHAB.sub.-- SYNP6 ALLOPHYCOCYANIN BETA SYNECHOCOCCUS SP 14-41 CHAIN PPHAC.sub.-- SYNP6 ALLOPHYCOCYANIN ALPHA- SYNECHOCOCCUS SP 33-60 B CHAIN PPHAG.sub.-- FREDI ALLOPHYCOCYANIN GAMMA FREMYELLA DIPLOSIPHON 32-59 CHAIN PPHB3.sub.-- FREDI C-PHYCOCYANIN-3 BETA FREMYELLA DIPLOSIPHON 29-56 CHAIN PPHBB.sub.-- ALCEU ACETOACETYL-COA ALCALIGENES EUTROPHUS 55-85 REDUCTASE PPHCA.sub.-- SYNY1 C-PHYCOCYANIN ALPHA SYNECHOCYSTIS SP 21-55 CHAIN PPHCB.sub.-- SYNP6 C-PHYCOCYANIN BETA SYNECHOCOCCUS SP 28-55 CHAIN PPHCB.sub.-- SYNP7 C-PHYCOCYANIN BETA SYNECHOCOCCUS SP 28-55 CHAIN PPHCB.sub.-- SYNY1 C-PHYCOCYANIN BETA SYNECHOCYSTIS SP 21-55 CHAIN PPHEA.sub.-- ECOLI CHORISMATE MUTASE ESCHERICHIA COLI 10-37 PPHEA.sub.-- ERWHE CHORISMATE MUTASE ERWINIA HERBICOLA 10-37 159-186 252-286 PPHEA.sub.-- PSESP PHENOL 2-MONOOXYGENASE PSEUDOMONAS SP 171-201 282-314 437-464 PPHEB.sub.-- MASLA PHYCOERYTHROCYANIN MASTIGOCLADUS LAMINOSUS 21-62 BETA CHAIN PPHEB.sub.-- PSESP CATHECHOL 1,2- PSEUDOMONAS SP 24-51 DIOXYGENASE PPHEG.sub.-- SYNPY LINKER POLYPEPTIDE SYNECHOCOCCUS SP 158-185 PPHEP.sub.-- ECOLI PHENYLALANINE-SPECIFIC ESCHERICHIA COLI 284-311 PERMEASE PPHF1.sub.-- CLOPA PERIPLASMIC [FE] CLOSTRIDIUM PASTEURIANUM 434-471 HYDROGENASE 1 PPHL1.sub.-- BACCE SPHINGOMYELINASE C BACILLUS CEREUS 2-36 PRECURSOR PPHL2.sub.-- BACCE SPHINGOMYELINASE C BACILLUS CEREUS 2-36 PRECURSOR PPHL3.sub.-- BACCE SPHINGOMYELINASE C BACILLUS CEREUS 2-36 PRECURSOR PPHLC.sub.-- BACCE PHOSPHOLIPASE C BACILLUS CEREUS 32-59 179-206 PRECURSOR PPHLC.sub.-- CLOBI PHOSPHOLIPASE C CLOSTRIDIUM BIFERMENTANS 50-77 335-365 PRECURSOR PPHLC.sub.-- CLOPE PHOSPHOLIPASE C CLOSTRIDIUM PERFRINGENS 210-237 369-398 PRECURSOR PPHLC.sub.-- LISMO PHOSPHOLIPASE C LISTERIA MONOCYTOGENES 147-174 PRECURSOR PPHLC.sub.-- PSEAE HEMOLYTIC PHOSPHOLIPASE PSEUDOMONAS AERUGINOSA 685-712 C PRECURSOR PPHLC.sub.-- STAAU PHOSPHOLIPASE C STAPHYLOCOCCUS AUREUS 6-33 PRECURSOR PPHLD.sub.-- BACCE PHOSPHOLIPASE C BACILLUS CEREUS 179-206 PRECURSOR PPHL.sub.-- LEPIN SPHINGOMYELINASE C LEPTOSPIRA INTERROGANS 30-57 394-428 PRECURSOR PPHND.sub.-- ECOLI PHND PROTEIN ESCHERICHIA COLI 296-326 PPHNK.sub.-- ECOLI PHNK PROTEIN ESCHERICHIA COLI 178-205 PPHNM.sub.-- ECOLI PHNM PROTEIN ESCHERICHIA COLI 5-35 PPHOE.sub.-- CITFR OUTER MEMBRANE PORE CITROBACTER FREUNDII 13-40 47-105 PROTEIN E PRECURSOR PPHOE.sub.-- ECOLI OUTER MEMBRANE PORE ESCHERICHIA COLI 13-40 64-105 168-195 226-253 PROTEIN E PRECURSOR PPHOE.sub.-- KLEOX OUTER MEMBRANE PORE KLEBSIELLA OXYTOCA 13-40 64-91 PROTEIN E PRECURSOR PPHOE.sub.-- KLEPN OUTER MEMBRANE PORE KLEBSIELLA PNEUMONIAE 13-40 64-105 PROTEIN E PRECURSOR PPHOE.sub.-- SALTY OUTER MEMBRANE PORE SALMONELLA TYPHIMURIUM 63-104 320-347 PROTEIN E PRECURSOR PPHOP.sub.-- BACSU ALK PHOS SYNTHESIS BACILLUS SUBTILIS 185-219 TRANS REG PROTEIN PPHOQ.sub.-- ECOLI SENSOR PROTEIN PHOQ ESCHERICHIA COLI 244-278 PPHOQ.sub.-- SALTY VIRULENCE SENSOR PROTEIN SALMONELLA TYPHIMURIUM 226-260 PHOQ PPHOR.sub.-- BACSU ALK PHOS SYNTHESIS BACILLUS SUBTILIS 89-145 387-425 SENSOR PROTEIN PHOR PPHRA.sub.-- ECOLI PHOTOREPAIR PROTEIN ESCHERICHIA COLI 63-90 207-241 PHRA PPHRA.sub.-- SYNPY R-PHYCOCYANIN II ALPHA SYNECHOCOCCUS SP 20-47 CHAIN PPHRA.sub.-- SYNPZ R-PHYCOCYANIN II ALPHA SYNECHOCOCCUS SP 20-47 CHAIN PPHSG.sub.-- ECOLI GLYCOGEN PHOSPHORYLASE ESCHERICHIA COLI 157-184 488-515 PPHSM.sub.-- ECOLI MALTODEXTRIN ESCHERICHIA COLI 71-108 PHOSPHORYLASE PPILA.sub.-- NEIGO PROB SIGNAL RECOGNITION NEISSERIA GONORRHOEAE 17-68 PARTICLE PROTEIN PPILB.sub.-- PSEAE FIMBRIAL ASSEMBLY PSEUDOMONAS AERUGINOSA 16-60 PROTEIN PILB PPILC.sub.-- PSEAE PILC PROTEIN PSEUDOMONAS AERUGINOSA 143-170 PPILD.sub.-- NEIGO LEADER PEPTIDASE NEISSERIA GONORRHOEAE 110-137 PPILQ.sub.-- PSEAE FIMBRIAL ASSEMBLY PSEUDOMONAS AERUGINOSA 71-115 639-666 PROTEIN PILQ PRECURSOR PPILS.sub.-- PSEAE SENSOR PROTEIN PILS PSEUDOMONAS AERUGINOSA 9-46 PPIR.sub.-- ECOLI P1 PROTEIN ESCHERICHIA COLI 156-188 PPIV.sub.-- MORBO PININ GENE INVERTING MORAXELLA BOVIS 42-69 152-182 PROTEIN PPIV.sub.-- MORLA PILIN GENE INVERTING MORAXELLA LACUNATA 152-182 PROTEIN PPLC.sub.-- BACCE PHOSPHODIESTERASE BACILLUS CEREUS 217-245 PRECURSOR PPLC.sub.-- BACTU PHOSPHODIESTERASE BACILLUS THURINGIENSIS 216-245 PRECURSOR PPLC.sub.-- LISMO PHOSPHODIESTERASE LISTERIA MONOCYTOGENES 238-265 PRECURSOR PPLSC.sub.-- ECOLI ACYLTRANSFERASE ESCHERICHIA COLI 106-133 PPLSX.sub.-- ECOLI PLSX PROTEIN ESCHERICHIA COLI 241-270 PPLYD.sub.-- ERWCA PECTIN LYASE ERWINIA CAROTOVORA 27-92 PPMBA.sub.-- ECOLI PMPA PROTEIN ESCHERICHIA COLI 9-50 PPME.sub.-- ERWCH PECTINESTERASE ERWINIA CHRYSANTHEMI 60-87 PRECURSOR PPMGY.sub.-- ECOLI PHOSPHOGLYCERATE ESCHERICHIA COLI 82-116 MUTASE PPMGY.sub.-- ZYMM PHOSPHOGLYCERATE ZYMOMONAS MOBILIS 13-40 80-110 MUTASE PPNP.sub.-- ECOLI POLYRIBONUC ESCHERICHIA COLI 260-294 NUCLEOTIDYLTRANSF PPNUC.sub.-- SALTY PNUC PROTEIN SALMONELLA TYPHIMURIUM 178-205 PPODK.sub.-- BACSY PYRUVATE, ORTHO- BACTEROIDES SYMBIOSUS 51-78 PHOSPHATE DIKINASE PPORF.sub.-- PSESY OUTER MEMBRANE PORIN PSEUDOMONAS SYRINGAE 111-138 F PRECURSOR PPORO.sub.-- PSEAE PORIN O PRECURSOR PSEUDOMONAS AERUGINOSA 390-424 PPORP.sub.-- PSEAE PORIN P PRECURSOR PSEUDOMONAS AERUGINOSA 139-181 260-287 369-396 PPOTD.sub .-- ECOLI BINDING PROTEIN ESCHERICHIA COLI 320-347 PRECURSOR PPOTE.sub.-- ECOLI PUTRESCINE-ORNITHINE ESCHERICHIA COLI 91-118 ANTIPORTER PPOXB.sub.-- ECOLI PYRUVATE DEHYDRO- ESCHERICHIA COLI 8-38 GENASE PPPB3.sub.-- BACSU ALKALINE PHOSPHATASE III BACILLUS SUBTILIS 109-150 433-460 PRECURSOR PPPB4.sub.-- BACSU ALKALINE PHOSPHATASE IV BACILLUS SUBTILIS 85-123 336-363 PRECURSOR PPPB.sub.-- ECOLI ALKALINE PHOSPHATASE ESCHERICHIA COLI 235-262 PRECURSOR PPPB.sub.-- ESCFE ALKALINE PHOSPHATE ESCHERICHIA FERGUSONII 236-263 PRECURSOR PPPCE.sub.-- FLAME PROLYL ENDOPEPTIDASE FLAVOBACTERIUM 158-199 PRECURSOR MENINGOSEPTICUM PPPCF.sub.-- FLAME PROLYL ENDOPEPTIDASE FLAVOBACTERIUM 158-199 256-283 PRECURSOR MENINGOSEPTICUM PPPCK.sub.-- ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA COLI 45-72 CARBOXYKINASE PPPDA.sub.-- CLOPE PROTEIN A PRECURSOR CLOSTRIDIUM PERFRINGENS 73-107 PPPSA.sub.-- ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA COLI 49-76 SYNTHASE PPQQ2.sub.-- ACICA COENZYME PQQ SYNTHESIS ACINETOBACTER CALCOACETICUS 40-74 PROTEIN II PPRCA.sub.-- ANAVA CALCIUM DEPENDENT ANABAENA VARIABILIS 371-398 PROTEASE PRECURSOR PPRCA.sub.-- THEAC PROTEASOME, ALPHA THERMOPLASMA ACIDOPHILUM 88-115 SUBUNIT PPRC.sub.-- ECOLI TAIL-SPECIFIC PROTEASE ESCHERICHIA COLI 158-192 366-393 PROCURSOR PPRE1.sub.-- STAAU PLASMID RECOMBINATION STAPHYLOCOCCUS AUREUS 27-78 152-179 264-347 ENZYME PPRE2.sub.-- STAAU PLASMID RECOMBINATION STAPHYLOCOCCUS AUREUS 48-75 181-208 310-361 366-393 ENZYME PPREA.sub.-- LACPL PLASMID RECOMBINATION LACTOBACILLUS PLANTARUM 37-71 291-318 ENZYME PPRE.sub.-- BACLI REGULATORY PROTEIN BACILLUS LICHENIFORMIS 2-40 PPRE.sub.-- BACSP PLASMID RECOMBINATION BACILLUS SP 181-224 288-345 ENZYME PPRE.sub.-- STRAG PLASMID RECOMBINATION STREPTOCOCCUS AGALACTIAE 285-319 332-359 420-454 ENZYME PPRFA.sub.-- LISMO LISTERIOLYSIN REGULA- LISTERIA MONOCYTOGENES 76-110 173-204 TORY PROTEIN PPRIA.sub.-- ECOLI PRIMOSOMAL PROTEIN N' ESCHERICHIA COLI 218-245 PPRIM.sub.-- BACSU DNA PRIMASE BACILLUS SUBTILIS 383-433 PPRIM.sub.-- BUCAP DNA PRIMASE BUCHNERA APHIDICOLA 13-43 282-319 PPRIM.sub.-- CLOAB DNA PRIMASE CLOSTRIDIUM ACETOBUTYLICUM 87-114 PPRIM.sub.-- LACLA DNA PRIMASE LACTOCOCCUS LACTIS 269-296 PPRIM.sub.-- RICPR DNA PRIMASE RICKETTSIA PROWAZEKII 10-37 245-286 477-504 526-593 PPRIS.sub.-- DESDE PRISMANE PROTEIN DESULFOVIBRIO DESULFURICANS 30-57 PPRLB.sub.-- ACHLY BETA-LYTIC METALLOENDO- ACHROMOBACTER LYTICUS 317-344 PEPTIDASE PPRLB.sub.-- LYSEN BETA-LYTIC METALLOENDO- LYSOBACTER ENZYMOGENES 121-148 PEPTIDASE PPRO1.sub.-- LISMO ZINC METALLOPROTEINASE LISTERIA MONOCYTOGENES 111-145 275-316 PRECURSOR PPRO2.sub.-- LISMO ZINC METALLOPROTEINASE LISTERIA MONOCYTOGENES 111-145 PRECURSOR PPROA.sub.-- SERMA GAMMA-GLUTAMYL SERRATIA MARCESCENS 309-336 PHOSPHATE REDUCTASE PPROA.sub.-- STAAU PROTEIN A PRECURSOR STAPHYLOCOCCUS AUREUS 2-29 PPROB.sub.-- SERMA GLUTAMATE 5-KINASE SERRATIA MARCESCENS 7-34 PPROB.sub.-- STRAG PROTEIN B STREPTOCOCCUS AGALACTIAE 58-85 PPROC.sub.-- PSEAE PYRROLINE-5- PSEUDOMONAS AERUGINOSA 148-175 CARBOXYLATE REDUCTASE PPROH.sub.-- BACSU PYRROLINE-5- BACILLUS SUBTILIS 200-227 CARBOXYLATE REDUCTASE HOMOL PPROP.sub.-- ECOLI PROLINE/BETAINE ESCHERICHIA COLI 460-487 TRANSPORTER PPROV.sub.-- ECOLI PERIPHERAL MEMBRANE ESCHERICHIA COLI 24-54 PROTEIN PROV PPROV.sub.-- SALTY PERIPHERAL MEMBRANE SALMONELLA TYPHIMURIUM 24-54 PROTEIN PROV PPRRB.sub.-- ECOLI PRRB PROTEIN ESCHERICHIA COLI 170-197 PPRRC.sub.-- ECOLI ANTICODON NUCLEASE ESCHERICHIA COLI 282-309 PPRRD.sub.-- ECOLI PRRD PROTEIN ESCHERICHIA COLI 278-305 PPRSA.sub.-- BACSU PROTEIN EXPORT PROTEIN BACILLUS SUBTILIS 52-87 95-157 PRSA PRECURSOR PPRTA.sub.-- STRGR PROTEASE A PRECURSOR STREPTOMYCES GRISEUS 56-110 PPRTC.sub.-- ERWCH SECRETED PROTEASE C ERWINIA CHRYSANTHEMI 103-130 PRECURSOR PPRTC.sub.-- PORGI COLLAGENASE PRECURSOR PORPHYROMONAS GINGIVALIS 285-312 PPRTD.sub.-- ERWCH PROTEASES SECRETION ERWINIA CHRYSANTHEMI 328-355 PROTEIN PRTD PPRTE.sub.-- BACNO EXTRACELLULAR SERINE BACTEROIDES NODOSUS 106-133 219-265 346-384 PROTEASE PRECURSOR PPRTE.sub.-- ERWCH PROTEASES SECRETION ERWINIA CHRYSANTHEMI 108-135 158-192 231-290 PROTEIN PRTE PPRTF.sub.-- ERWCH PROTEASES SECRETION ERWINIA CHRYSANTHEMI 280-310 PROTEIN PRTF PPRTM.sub.-- LACLA PROTEASE MATURATION LACTOCOCCUS LACTIS 76-103 112-139 PROTEIN PRECURSOR PPRTM.sub.-- LACLC PROTEASE MATURATION LACTOCOCCUS LACTIS 26-53 76-103 112-139 PROTEIN PRECURSOR PPRTM.sub.-- LACPA PROTEASE MATURATION LACTOBACILLUS PARACASEI 76-103 112-139 PROTEIN PRECURSOR PPRTS.sub.-- SERMA EXTRACELLULAR SERINE SERRATIA MARCESCENS 304-331 576-607 1007-1041 PROTEASE PRECURSOR PPRTT.sub.-- SERMA EXTRACELLULAR SERINE SERRATIA MARCESCENS 304-331 463-491 1007-1041 PROTEASE PRECURSOR PPRTX.sub.-- ERWCH SECRETED PROTEASE C ERWINIA CHRYSANTHEMI 314-341 PRECURSOR PPSAA.sub.-- SYNEN CHLOROPHYLL A SYNECHOCOCCUS ELONGATUS 120-147 APOPROTEIN A1 NAEGEL PPSAA.sub.-- SYNP2 CHLOROPHYLL A SYNECHOCOCCUS SP 109-136 326-356 APOPROTEIN A1 PPSAA.sub.-- SYNVU CHLOROPHYLL A SYNECHOCOCCUS VULCANUS 120-147 APOPROTEIN A1 PPSAA.sub.-- SYNY3 CHLOROPHYLL A SYNECHOCYSTIS SP 44-71 120-147 338-368 APOPROTEIN A1 PPSAB.sub.-- YERPE CHAPERONE PROTEIN PSAB YERSINIA PESTIS 244-271 PRECURSOR PPSAD.sub.-- SYNP6 PHOTOSYSTEM 1 REACTION SYNECHOCOCCUS SP 11-38 CENTRE SUBUNIT II PPSAE.sub.-- YERPE PSAE PROTEIN PRECURSOR YERSINIA PESTIS 66-118 PPSBO.sub.-- ANANI STABILIZING POLYPEPTIDE ANACYSTIS NIDULANS 99-126 209-243 PRECURSOR PPSPA.sub.-- ECOLI PHAGE SHOCK PROTEIN A ESCHERICHIA COLI 55-82 PPSRA.sub.-- WOLSU POLYSULFIDE REDUCTASE WOLINELLA SUCCINOGENES 114-141 CHAIN A PRECURSOR PPSTS.sub.-- ECOLI PHOSPHATE-BINDING ESCHERICHIA COLI 40-74 PROTEIN PRECURSOR PPT1.sub.-- BACSU PHOSPHOTRANSFERASE BACILLUS SUBTILIS 26-60 PPT1.sub.-- ECOLI PHOSPHOTRANSFERASE ESCHERICHIA COLI 135-162 399-426 PPT1.sub.-- SALTY PHOSPHOTRANSFERASE SALMONELLA TYPHIMURIUM 232-259 399-426 PPT1.sub.-- STACA PHOSPHOTRANSFERASE STAPHYLOCOCCUS CARNOSUS 34-61 PPT1.sub.-- STRSL PHOSPHOTRANSFERASE STREPTOCOCCUS SALIVARIUS 34-61 198-232 PPT2B.sub.-- ERWCH PHOSPHOTRANSFERASE ERWINIA CHRYSANTHEMI 127-154 ENZYME II PPT2G.sub.-- BACSU PHOSPHOTRANSFERASE BACILLUS SUBTILIS 670-697 ENZYME II PPT2L.sub.-- LACCA PHOSPHOTRANSFERASE LACTOBACILLUS CASEI 537-564 ENZYME II PPT2L.sub.-- LACLA PHOSPHOTRANSFERASE LACTOCOCCUS LACTIS 183-214 409-436 ENZYME II PPT2L.sub.-- STAAU PHOSPHOTRANSFERASE STAPHYLOCOCCUS AUREUS 421-448 530-557 ENZYME II PPT2M.sub.-- ECOLI PHOSPHOTRANSFERASE ESCHERICHIA COLI 445-489 ENZYME II PPT2M.sub.-- STACA PHOSPHOTRANSFERASE STAPHYLOCOCCUS CARNOSUS 388-415 ENZYME II PPT2N.sub.-- ECOLI N-ACETYLGLUCOSAMINE- ESCHERICHIA COLI 370-400 PERMEASE PPT2S.sub.-- STRMU PHOSPHOTRANSFERASE STREPTOCOCCUS MUTANS 600-627 ENZYME II PPT3F.sub.-- SALTY PHOSPHOTRANSFERASE SALMONELLA TYPHIMURIUM 107-134 FPR PROTEIN PPT3L.sub.-- LACCA PHOSPHOTRANSFERASE LACTOBACILLUS CASEI 40-67 FACTOR III PPTHP.sub.-- ECOLI PHOSPHOCARRIER PROTEIN ESCHERICHIA COLI & 31-65 HPR SALMONELLA TYPHIMURIUM PPTHP.sub.-- KLEPN PHOSPHOCARRIER PROTEIN KLEBSIELLA PNEUMONIAE 31-65 HPR PPTRB.sub.-- ECOLI PROTEASE II ESCHERICHIA COLI 94-121 217-251 PPULA.sub.-- KLEAE PULLULANASE KLEBSIELLA AEROGENES 894-928 PPULA.sub.-- KLEPN PULLULANASE KLEBSIELLA PNEUMONIAE 894-918 PPULO.sub.-- KLEPN LEADER PEPTIDASE KLEBSIELLA PNEUMONIAE 178-205 PPULS.sub.-- KLEPN PULS PRECURSOR KLEBSIELLA PNEUMONIAE 70-97 PPUPA.sub.-- PSEPU UPTAKE PROTEIN PSEUDOMONAS PUTIDA 112-162 210-237 429-463 736-763 PRECURSOR PPUR1.sub.-- BACSU AMIDOPHOSPHORIBOSYL- BACILLUS SUBTILIS 394-421 TRANSF PREC PPUR2.sub.-- BACSU PHOSPHORIBOSYLAMINE-- BACILLUS SUBTILIS 349-376 GLYCINE LIGASE PPUR3.sub.-- BACSU FORMYLTRANSFERASE BACILLUS SUBTILIS 149-176 PPUR3.sub.-- ECOLI FORMYLTRANSFERASE ESCHERICHIA COLI 27-54 PPUR4.sub.-- BACSU SYNTHASE I BACILLUS SUBTILIS 18-45 PPUR5.sub.-- BACSU CYCLO-LIGASE BACILLUS SUBTILIS 153-194 PPUR6.sub.-- ECOLI AIR CARBOXYLASE ESCHERICHIA COLI 131-158 PPUR7.sub.-- BACSU SAICAR SYNTHETASE BACILLUS SUBTILIS 3-43 PPUR8.sub .-- BACSU ADENYLOSUCCINATE LYASE BACILLUS SUBTILIS 56-130 226-253 PPUR8.sub.-- ECOLI ADENYLOSUCCINATE LYASE ESCHERICHIA COLI 194-221 331-372 PPUR9.sub.-- BACSU AICAR TRANSFORMYLASE BACILLUS SUBTILIS 19-53 345-372 PPUR9.sub.-- ECOLI AICAR TRANSFORMYLASE ESCHERICHIA COLI 239-268 PPUR9.sub.-- SALTY AICAR TRANSFORMYLASE SALMONELLA TYPHIMURIUM 218-247 PPURL.sub.-- BACSU SYNTHASE II BACILLUS SUBTILIS 609-636 PPYG1.sub.-- ANASP LINKER POLYPEPTIDE CPCG1 ANABAENA SP 88-115 PPYG1.sub.- - MASLA LINKER POLYPEPTIDE CPCG1 MASTIGOCLADUS LAMINOSUS 89-116 PPYG2.sub.-- ANASP LINKER POLYPEPTIDE CPCG2 ANABAENA SP 88-115 PPYG2.sub.-- MASLA LINKER POLYPEPTIDE CPCG2 MASTIGOCLADUS LAMINOSUS 89-116 PPYG3.sub.-- MASLA LINKER POLYPEPTIDE CPCG3 MASTIGOCLADUS LAMINOSUS 91-132 PPYG4.sub.-- ANASP LINKER POLYPEPTIDE CPCG4 ANABAENA SP 90-131 PPYR1.sub.-- ANASP 32.1 KD LINKER POLYPEPTIDE ANABAENA SP 35-62 PPYR2.sub.-- FREDI 27.9 KD LINKER POLYPEPTIDE FREMYELLA DIPLOSIPHON 105-132 PPYR4.sub.-- FREDI 31.6 KD LINKER POLYPEPTIDE FREMYELLA DIPLOSIPHON 22-66 PPYR5.sub.-- FREDI 37.5 KD LINKER POLYPEPTIDE FREMYELLA DIPLOSIPHON 106-143 PPYR6.sub.-- FREDI 30.8 KD LINKER POLYPEPTIDE FREMYELLA DIPLOSIPHON 43-70 113-140 PPYRB.sub.-- BACSU ASPARTATE CARBAMOYL- BACILLUS SUBTILIS 9-36 TRANSFERASE PPYRB.sub.-- SERMA ASPARTATE CARBAMOYL- SERRATIA MARCESCENS 70-97 TRANSFERASE PPYRD.sub.-- ECOLI DIHYDROOROTATE ESCHERICHIA COLI 115-142 DEHYDROGENASE PPYRD.sub.-- SALTY DIHYDROOROTATE SALMONELLA TYPHIMURIUM 115-142 183-210 DEHYDROGENASE PPYRG.sub.-- BACSU CTP SYNTHASE BACILLUS SUBTILIS 275-302 322-349 PPYS1.sub.-- FREDI PHYCOBILISOME 9.7 KD FREMYELLA DIPLOSIPHON 21-48 LINKER POLYPEPTIDE PQOR.sub.-- ECOLI QUINONE OXIDOREDUCTASE ESCHERICHIA COLI 180-215 PQUEA.sub.-- ECOLI QUEUOSINE BIOSYNTHESIS ESCHERICHIA COLI 234-261 PROTEIN QUEA PR34K.sub.-- CLOPA 34.2 KD PROTEIN IN CLOSTRIDIUM PASTEURIANUM 23-50 157-232 RUBREDOXIN OPERON PRACC.sub.-- ECOLI RACC PROTEIN ESCHERICHIA COLI 5-32 PRACD.sub.-- STRTR ASPARTATE RACEMASE STREPTOCOCCUS THERMOPHILUS 152-189 PRACS.sub.-- BACSU PROBABLE AMINO ACID BACILLUS SUBTILIS 132-162 RACEMASE PRAFA.sub.-- ECOLI ALPHA-GALACTOSIDASE ESCHERICHIA COLI 89-116 PRAFD.sub.-- ECOLI RAFFINOSE INVERTASE ESCHERICHIA COLI 348-375 PRBSC.sub.-- ECOLI RIBOSE TRANSPORT SYSTEM ESCHERICHIA COLI 65-99 195-222 COMPONENT PRBSK.sub.-- ECOLI RIBOKINASE ESCHERICHIA COLI 200-239 PRBTR.sub.-- KLEAE RIBITOL (RBT) OPERON KLEBSIELLA AEROGENES 6-47 REPRESSOR PRCSA.sub.-- ECOLI BIOSYNTHESIS ACTIVATION ESCHERICHIA COLI 170-197 PROTEIN A PRCSA.sub.-- ERWAM BIOSYNTHESIS ACTIVATION ERWINIA AMYLOVORA 92-119 174-201 PROTEIN A PRCSA.sub.-- ERWST BIOSYNTHESIS ACTIVATION ERWINIA STEWARTII 174-201 PROTEIN A PRCSA.sub.-- KLEAE BIOSYNTHESIS ACTIVATION KLEBSIELLA AEROGENES 168-205 PROTEIN A PRCSB.sub.-- ECOLI CAPSULE SYNTHESIS B ESCHERICHIA COLI 14-41 159-186 COMPONENT PREC2.sub.-- LEGPN RECA PROTEIN LEGIONELLA PNEUMOPHILA 262-310 PRECA.sub.-- ACHLA RECA PROTEIN ACHOLEPLASMA LAIDLAWII 283-310 PRECA.sub.-- AGRTU RECA PROTEIN AGROBACTERIUM TUMEFACIENS 3-30 132-159 281-308 PRECA.sub.-- ANAVA RECA PROTEIN ANABAENA VARIABILIS 322-349 PRECA.sub.-- AQUPY RECA PROTEIN AQUIFEX PYROPHILUS 63-90 126-153 PRECA.sub.-- BACFR RECA PROTEIN BACTEROIDES FRAGILIS 108-135 PRECA.sub.-- BACSU RECE PROTEIN BACILLUS SUBTILIS 267-294 PRECA.sub.-- BRUAB RECA PROTEIN BRUCELLA ABORTUS 3-30 132-159 280-307 PRECA.sub.-- BURCE RECA PROTEIN BURKHOLDERIA CEPACIA 75-109 PRECA.sub.-- ERWCA RECA PROTEIN ERWINIA CAROTOVORA 284-311 PRECA.sub.-- LACDE RECA PROTEIN LACTOBACILLUS DELBRUECKII 20-47 PRECA.sub.-- LACHE RECA PROTEIN LACTOBACILLUS HELVETICUS 20-47 PRECA.sub.-- LACLA RECA PROTEIN LACTOCOCCUS LACTIS 135-162 232-269 288-315 PRECA.sub.-- METCL RECA PROTEIN METHYLOMONAS CLARA 266-303 PRECA.sub.-- METFL RECA PROTEIN METHYLOBACILLUS FLAGELLATUM 276-303 PRECA.sub.- - MYCPU RECA PROTEIN MYCOPLASMA PULMONIS 30-57 PRECA.sub.-- MYCTU RECA PROTEIN MYCOBACTERIUM TUBERCULOSIS 749-776 PRECA.sub.-- NEIGO RECA PROTEIN NEISSERIA GONORRHOEAE 263-310 PRECA.sub.- - PROMI RECA PROTEIN PROTEUS MIRABILIS 283-310 PRECA.sub.-- PSEAE RECA PROTEIN PSEUDOMONAS AERUGINOSA 282-309 PRECA.sub.-- RHILP RECA PROTEIN RHIZOBIUM LEGUMINOSARUM 3-30 131-158 280-307 PRECA.sub.-- RHILV RECA PROTEIN RHIZOBIUM LEGUMINOSARUM 119-146 268-295 PRECA.sub.-- RHIME RECA PROTEIN RHIZOBIUM MELILOTI 119-146 268-295 PRECA.sub .-- RHOSH RECA PROTEIN RHODOBACTER SPHAEROIDES 119-146 PRECA.sub.-- STRPN RECA PROTEIN STREPTOCOCCUS PNEUMONIAE 134-161 293-327 PRECA.sub.-- SYNP2 RECA PROTEIN SYNECHOCOCCUS SP 124-151 PRECA.sub.-- VIBCH RECA PROTEIN VIBRIO CHOLERAE 290-317 PRECF.sub.-- BACSU RECF PROTEIN BACILLUS SUBTILIS 4-31 178-205 PRECF.sub.-- ECOLI RECF PROTEIN ESCHERICHIA COLI 82-109 147-174 PRECF.sub.-- PROMI RECF PROTEIN PROTEUS MIRABILIS 86-113 PRECF.sub.-- PSEPU RECF PROTEIN PSEUDOMONAS PUTIDA 84-111 PRECF.sub.-- SALTY RECF PROTEIN SALMONELLA TYPHIMURIUM 147-174 PRECJ.sub.-- ECOLI EXONUCLEASE RECJ ESCHERICHIA COLI 52-79 PRECN.sub.-- BACSU RECOMBINATION PROTEIN BACILLUS SUBTILIS 21-48 156-184 192-247 299-336 344-378 PRECQ.sub.-- ECOLI DNA HELICASE RECQ ESCHERICHIA COLI 468-495 PRELA.sub.-- ECOLI GTP PYROPHOSPHOKINASE ESCHERICHIA COLI 680-707 PREMA.sub.-- BACSU REPLICATION AND BACILLUS SUBTILIS 2-36 81-108 MAINTENANCE PROTEIN PREMA.sub.-- STAAU REPLICATION AND STAPHYLOCOCCUS AUREUS 2-36 81-108 MAINTENANCE PROTEIN PREMA.sub.-- STAEP REPLICATION AND STAPHYLOCOCCUS EPIDERMIDIS 2-36 81-108 MAINTENANCE PROTEIN PREP5.sub.-- ECOLI REPLICATION PROTEIN REPA ESCHERICHIA COLI 50-77 90-117 PREPA.sub.-- BACSU REPA PROTEIN BACILLUS SUBTILIS 342-373 PREPA.sub.-- ECOLI REPA PROTEIN ESCHERICHIA COLI 91-118 228-255 PREPA.sub.-- NEIGO REPLICATION PROTEIN NEISSERIA GONORRHOEAE 57-84 138-172 PREPB.sub.-- LACPL REPLICATION PROTEIN LACTOBACILLUS PLANTARUM 184-211 REPB PREPM.sub.-- STAAU REPLICATION INITIATION STAPHYLOCOCCUS AUREUS 254-284 PROTEIN PREPN.sub.-- STAAU REPLICATION INITIATION STAPHYLOCOCCUS AUREUS 258-285 PROTEIN PREPR.sub.-- STRAG REPR PROTEIN STREPTOCOCCUS AGALACTIAE 430-467 PREPS.sub.-- STRPY REPS PROTEIN STREPTOCOCCUS PYOGENES 423-467 PREPX.sub.-- STAAU REP PROTEIN STAPHYLOCOCCUS AUREUS 111-150 172-210 PREPY.sub.-- ECOLI REPLICATION INITIATION ESCHERICHIA COLI 288-315 PROTEIN PREP.sub.-- CLOPE REPLICATION PROTEIN CLOSTRIDIUM PERFRINGENS 168-195 297-324 343-375 PREP.sub.- - ECOLI REP HELICASE ESCHERICHIA COLI 119-146 205-243 PREP.sub.-- LACPL REP PROTEIN LACTOBACILLUS PLANTARUM 119-199 260-287 PRESP.sub.-- CLOPE RESOLVASE CLOSTRIDIUM PERFRINGENS 68-102 151-185 PRF2.sub.-- BACSU PROBABLE PEPTIDE CHAIN BACILLUS SUBTILIS 34-68 RELEASE FACTOR 2 PRF2.sub.-- ECOLI PEPTIDE CHAIN RELEASE ESCHERICHIA COLI 86-113 163-204 FACTOR 2 PRF2.sub.-- SALTY PEPTIDE CHAIN RELEASE SALMONELLA TYPHIMURIUM 86-113 163-204 FACTOR 2 PRF3.sub.-- ECOLI PEPTIDE CHAIN RELEASE ESCHERICHIA COLI 180-210 443-473 FACTOR 3 PRFAB.sub.-- ECOLI 1,6-GALACTOSYL- ESCHERICHIA COLI 199-226 TRANSFERASE PRFAG.sub.-- ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI 185-212 RFAG PRFAJ.sub.-- ECOLI 1,2-GLUCOSYLTRANSFERASE ESCHERICHIA COLI 39-66 233-268 PRFAJ.sub.-- SALTY 1,2-GLUCOSYLTRANSFERASE SALMONELLA TYPHIMURIUM 68-95 145-172 236-263 PRJAK.sub.-- SALTY 1,2-N-ACETYLGLUCOSAMINE- SALMONELLA TYPHIMURIUM 335-369 TRANSFERASE PRFAL.sub.-- ECOLI O-ANTIGEN LIGASE ESCHERICHIA COLI 366-393 PRFAL.sub.-- SALTY O-ANTIGEN LIGASE SALMONELLA TYPHIMURIUM 326-360 PRFAP.sub.- - ECOLI BIOSYNTHESIS PROTEIN RFAP ESCHERICHIA COLI 8-35 PRFAS.sub.-- ECOLI BIOSYNTHESIS PROTEIN RFAS ESCHERICHIA COLI 62-89 184-240 PRFAY.sub.-- ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI 18-45 RFAY PRFAZ.sub.-- ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI 3-30 85-112 RFAZ PRFBB.sub.-- SALTY DTDP-GLUCOSE 4,6- SALMONELLA TYPHIMURIUM 320-359 DEHYDRATASE PRFBM.sub.-- SALTY MANNOSE-1-PHOSPHATE SALMONELLA TYPHIMURIUM 313-361 GUANYLYLTRANSFERASE PRFBS.sub.-- SALTI PARATOSE SYNTHASE SALMONELLA TYPHI 22-56 205-232 PRFEA.sub.-- VIBAN PRECURSOR FOR FERRIC VIBRIO ANGUILLARUM 349-376 ANGUIBACTIN PRFH.sub.-- ECOLI PEPTIDE CHAIN RELEASE ESCHERICHIA COLI 83-110 FACTOR HOMOLOG PRG12.sub.-- BACTU PUTATIVE G12 SITE-SPECIFIC BACILLUS THURINGIENSIS 15-68 190-262 310-383 RECOMBINASE PRHAB.sub.-- ECOLI RHAMNULOKINASE ESCHERICHIA COLI 175-202 PRHAB.sub.-- SALTY RHAMNULOKINASE SALMONELLA TYPHIMURIUM 175-202 PRHAR.sub.- - ECOLI L-RHAMNOSE OPERON ESCHERICHIA COLI 10-41 TRANSACTIVATOR PRHAS.sub.-- ECOLI L-RHAMNOSE OPERON REG ESCHERICHIA COLI 152-179 PROTEIN RHAS PRHIR.sub.-- RHILV RHIR REGULATORY PROTEIN RHIZOBIUM LEGUMINOSARUM 206-233 PRHLB.sub.-- ECOLI RNA HELICASE RHLB/MMRA ESCHERICHIA COLI 138-165 PRHO.sub.-- BORBU TRANS TERM FACTOR RHO BORRELIA BURGDORFERI 215-242 327-369 PRHPR.sub.-- BACSU PROTEASE PROD REG BACILLUS SUBTILIS 82-109 PROTEIN HPR PRHSA.sub.-- ECOLI RHSA PROTEIN PRECURSOR ESCHERICHIA COLI 667-694 PRHSB.sub.-- ECOLI RHSB PROTEIN PRECURSOR ESCHERICHIA COLI 667-694 PRHSC.sub.-- ECOLI RHSC PROTEIN PRECURSOR ESCHERICHIA COLI 380-414 667-694 1056-1083 PRHSD.sub.-- ECOLI RHSD PROTEIN PRECURSOR ESCHERICHIA COLI 671-712 1071-1098 PRHSE.sub.-- ECOLI RHSE PROTEIN ESCHERICHIA COLI 345-372 PRIML.sub.-- ECOLI ACETYLTRANSFERASE ESCHERICHIA COLI 93-127 PRIR2.sub.-- ECOLI RIBONUCLEOSIDE- ESCHERICHIA COLI 167-194 DIPHOSPHATE REDUCTASE PRISA.sub.-- PHOLE RIBOFLAVIN SYNTHASE PHOTOBACTERIUM LEIOGNATHI 2-47 131-158 ALPHA CHAIN PRISB.sub.-- BACSU RIBOFLAVIN SYNTHASE BACILLUS SUBTILIS 8-35 BETA CHAIN PRISB.sub.-- PHOLE RIBOFLAVIN SYNTHASE PHOTOBACTERIUM LEIOGNATHI 14-41 BETA CHAIN PRL10.sub.-- STRAT 50S RIBOSOMAL PROTEIN L10 STREPTOMYCES ANTIBIOTICUS 14-72 106-133 PRL12.sub.-- SYNY3 50S RIBOSOMAL PROTEIN L12 SYNECHOCYSTIS SP 2-34 PRL12.sub.-- THEMA 50S RIBOSOMAL PROTEIN L12 THERMOTOGA MARITIMA 8-35 56-86 PRL14.sub.-- BACST 50S RIBOSOMAL PROTEIN L14 BACILLUS STEAROTHERMOPHILUS 18-45 PRL14.sub.-- MICLU 50S RIBOSOMAL PROTEIN L14 MICROCOCCUS LUTEUS 18-45 PRL14.sub.-- MYCCA 50S RIBOSOMAL PROTEIN L14 MYCOPLASMA CAPRICOLUM 51-92 PRL15.sub.-- BACLI 50S RIBOSOMAL PROTEIN L15 BACILLUS LICHENIFORMIS 21-48 PRL15.sub.-- BACST 50S RIBOSOMAL PROTEIN L15 BACILLUS STEAROTHERMOPHILUS 95-134 PRL15.sub.-- BACSU 50S RIBOSOMAL PROTEIN L15 BACILLUS SUBTILIS 95-122 PRL15.sub.-- CHLTR 50S RIBOSOMAL PROTEIN L15 CHLAMYDIA TRACHOMATIS 110-144 PRL15.sub.-- ECOLI 50S RIBOSOMAL PROTEIN L15 ESCHERICHIA COLI 79-113 PRL15.sub.-- LACLA 50S RIBOSOMAL PROTEIN L15 LACTOCOCCUS LACTIS 8-35 PRL15.sub.-- METVA 50S RIBOSOMAL PROTEIN L15 METHANOCOCCUS VANNIELII 68-102 PRL15.sub.-- MYCCA 50S RIBOSOMAL PROTEIN L15 MYCOPLASMA CAPRICOLUM 63-135 PRL18.sub.-- BACST 50S RIBOSOMAL PROTEIN L18 BACILLUS STEAROTHERMOPHILUS 31-58 PRL18.sub.-- CHLTR 50S RIBOSOMAL PROTEIN L18 CHLAMYDIA TRACHOMATIS 32-86 PRL18.sub.-- HALMA 50S RIBOSOMAL PROTEIN L18 HALOARCULA MARISMORTUI 80-107 PRL18.sub.-- MYCCA 50S RIBOSOMAL PROTEIN L18 MYCOPLASMA CAPRICOLUM 61-88 PRL19.sub.-- ECOLI 50S RIBOSOMAL PROTEIN L19 ESCHERICHIA COLI 25-52 PRL19.sub.-- HALMA 50S RIBOSOMAL PROTEIN L19 HALOARCULA MARISMORTUI 101-128 PRL19.sub.-- METVA PROBABLE 50S RIBOSOMAL METHANOCOCCUS VANNIELII 45-72 PROTEIN PRL1.sub.-- PROVU 50S RIBOSOMAL PROTEIN L1 PROTEUS VULGARIS 159-194 PRL1.sub.-- SULSO 50S RIBOSOMAL PROTEIN L1 SULFOLOBUS SOLFATARICUS 5-32 184-211 PRL20.sub.-- ECOLI 50S RIBOSOMAL PROTEIN L20 ESCHERICHIA COLI 14-41 PRL20.sub.-- MYCFE 50S RIBOSOMAL PROTEIN L20 MYCOPLASMA FERMENTANS 14-41 PRL21.sub.-- BACSU 50S RIBOSOMAL PROTEIN L21 BACILLUS SUBTILIS 4-38 PRL22.sub.-- ECOLI 50S RIBOSOMAL PROTEIN L22 ESCHERICHIA COLI 28-55 PRL23.sub.-- METVA 50S RIBOSOMAL PROTEIN L23 METHANOCOCCUS VANNIELII 30-57 PRL23.sub.-- MYCCA 50S RIBOSOMAL PROTEIN L23 MYCOPLASMA CAPRICOLUM 32-59 PRL24.sub.-- HALMA 50S RIBOSOMAL PROTEIN L24 HALOARCULA MARISMORTUI 48-75 PRL24.sub.-- METVA 50S RIBOSOMAL PROTEIN L24 METHANOCOCCUS VANNIELII 61-90 PRL24.sub.-- MICLU 50S RIBOSOMAL PROTEIN L24 MICROCOCCUS LUTEUS 36-63 PRL29.sub.-- CHLTR 50S RIBOSOMAL PROTEIN L29 CHLAMYDIA TRACHOMATIS 39-66 PRL29.sub.-- ECOLI 50S RIBOSOMAL PROTEIN L29 ESCHERICHIA COLI 36-63 PRL29.sub.-- MYCCA 50S RIBOSOMAL PROTEIN L29 MYCOPLASMA CAPRICOLUM 39-85 PRL4.sub.-- BACST 50S RIBOSOMAL PROTEIN L4 BACILLUS STEAROTHERMOPHILUS 141-168 PRL4.sub.-- MYCCA 50S RIBOSOMAL PROTEIN L4 MYCOPLASMA CAPRICOLUM 144-198 PRL5.sub.-- THETH 50S RIBOSOMAL PROTEIN L5 THERMUS AQUATICUS 38-65 PRL6.sub.-- BACST 50S RIBOSOMAL PROTEIN L6 BACILLUS STEAROTHERMOPHILUS 79-106 PRL6.sub.-- ECOLI 50S RIBOSOMAL PROTEIN L6 ESCHERICHIA COLI 19-46 PRL6.sub.-- METVA 50S RIBOSOMAL PROTEIN L6 METHANOCOCCUS VANNIELII 129-159 PRL9.sub.-- BACST 50S RIBOSOMAL PROTEIN L9 BACILLUS STEAROTHERMOPHILUS 47-77 PRL9.sub.-- ECOLI 50S RIBOSOMAL PROTEIN L9 ESCHERICHIA COLI 122-149 PRLA0.sub.-- HALCU ACIDIC RIBOSOMAL PROTEIN HALBACTERIUM CUTIRUBRUM 138-182 P0 HOMOLOG PRLA0.sub.-- HALHA ACIDIC RIBOSOMAL PROTEIN HALOBACTERIUM HALOBIUM 138-182 PO HOMOLOG PRLA0.sub.-- HALMA ACIDIC RIBOSOMAL PROTEIN HALOARCULA MARISMORTUI 64-91 153-184 PO HOMOLOG PRLA0.sub.-- METVA ACIDIC RIBOSOMAL PROTEIN METHANOCOCCUS VANNIELII 194-221 PO HOMOLOG PRLA.sub.-- HALEU RIBOSOMAL PROTEIN `A` HALOPHILIC EUBACTERIUM 59-86 NRCC 41227 PRLA.sub.-- HALHA 50S RIBOSOMAL PROTEIN L20 HALOBACTERIUM HALOBIUM 2-29 PRLA.sub.-- HALMA 50S RIBOSOMAL PROTEIN L12 HALOARCULA MARISMORTUI 2-29 PRLA.sub.-- METVA RIBOSOMAL PROTEIN `A` METHANOCOCCUS VANNIELII 2-29 PRLA.sub.-- MICLU 50S RIBOSOMAL PROTEIN MA MICROCOCCUS LUTEUS 55-82 90-117 PRLX1.sub.-- SALTY 43 KD RELAXATION PROTEIN SALMONELLA TYPHIMURIUM 226-260 PRLX1.sub.-- STAAU RLX PROTEIN STAPHYLOCOCCUS AUREUS 3-30 102-132 177-218 266-300 PRLX2.sub.-- SALTY 22 KD RELAXATION PROTEIN SALMONELLA TYPHIMURIUM 19-53 PRLX2.sub.-- STAAU RLX PROTEIN STAPHYLOCOCCUS AUREUS 3-30 102-133 261-295 PRLX3.sub.-- STAAU RLX PROTEIN STAPHYLOCOCCUS AUREUS 3-30 146-216 PRLX.sub.-- SULSO 50S RIBOSOMAL PROTEIN LX SULFOLOBUS SOLFATARICUS 32-62 PRNBR.sub.-- BACAM RIBONUCLEASE PRECURSOR BACILLUS AMYLOLIQUEFACIENS 33-67 129-156 PRNC.sub.-- ECOLI RIBONUCLEASE III ESCHERICHIA COLI 10-37 117-144 PRNE.sub.-- ECOLI RIBONUCLEASE E ESCHERICHIA COLI 413-440 628-662 PRNPA.sub.-- BUCAP RIBONUCLEASE P PROTEIN BUCHNERA APHIDICOLA 85-114 COMPONENT PRNPH.sub.-- BACSU RIBONUCLEASE PH BACILLUS SUBTILIS 159-186 PRNS.sub.-- ECOLI REGULATORY PROTEIN RNS ESCHERICHIA COLI 116-160 PRN.sub.-- BACCI RIBONUCLEASE BACILLUS CIRCULANS 82-109 PRN.sub.-- BACIN RIBONUCLEASE PRECURSOR BACILLUS INTERMEDIUS 38-72 PRP28.sub.-- BACTK RNA POLYMERASE SIGMA-28 BACILLUS THURINGIENSIS 73-107 FACTOR PRECURSOR PRP32.sub.-- CITFR RNA POLYMERASE SIGMA-32 CITROBACTER FREUNDII 30-57 FACTOR PRP35.sub.-- BACTK RNA POLYMERASE SIGMA-35 BACILLUS THURINGIENSIS 8-35 63-90 FACTOR PRECURSOR PRP54.sub.-- ALCEU RNA POLYMERASE SIGMA-54 ALCALIGENES EUTROPHUS 229-266 FACTOR PRP54.sub.-- AZOCA RNA POLYMERASE SIGMA-54 AZORHIZOBIUM CAULINODANS 174-208 FACTOR PRP54.sub.-- BACSU RNA POLYMERASE SIGMA-54 BACILLUS SUBTILIS 16-43 97-124 274-308 396-423 FACTOR PRP54.sub.-- BRAJA RNA POLYMERASE SIGMA-54 BRADYRHIZOBIUM JAPONICUM 97-124 FACTOR 1 PRP54.sub.-- KLEPN RNA POLYMERASE SIGMA-54 KLEBSIELLA PNEUMONIAE 148-182 FACTOR PRP54.sub.-- RHOCA RNA POLYMERASE SIGMA-54 RHODOBACTER CAPSULATUS 155-185 FACTOR PRP55.sub.-- BRAJA RNA POLYMERASE SIGMA-54 BRADYRHIZOBIUM JAPONICUM 145-172 FACTOR 2 PRP5M.sub.-- ALCEU PROBABLE SIGMA (54) ALCALIGENES EUTROPHUS 21-51 MODULATION PROTEIN PRP5M.sub.-- ECOLI PROBABLE SIGMA (54) ESCHERICHIA COLI 21-67 MODULATION PROTEIN PRP5M.sub.-- SALTY PROBABLE SIGMA (54) SALMONELLA TYPHIMURIUM 21-67 MODULATION PROTEIN PRP70.sub.-- BUCAP RNA POLYMERASE SIGMA-70 BUCHNERA APHIDICOLA 69-96 109-136 173-217 228-255 303-337 FACTOR PRP70.sub.-- CHLTR RNA POLYMERASE SIGMA-70 CHLAMYDIA TRACHOMATIS 5-32 FACTOR PRP70.sub.-- ECOLI RNA POLYMERASE SIGMA-70 ESCHERICHIA COLI 327-361 FACTOR PRP70.sub.-- PSEAE RNA POLYMERASE SIGMA-70 PSEUDOMONAS AERUGINOSA 334-368 FACTOR PRP70.sub.-- RICPR RNA POLYMERASE SIGMA-70 RICKETTSIA PROWAZEKII 244-321 348-382 FACTOR PRP80.sub.-- MYXXA RNA POLYMERASE SIGMA-80 MYXOCOCCUS XANTHUS 208-235 318-347 359-386 FACTOR PRPCF.sub.-- SYNPY BILIN BIOSYNTHESIS SYNECHOCOCCUS SP 180-207 PROTEIN RPCF PRPOA.sub.-- BACSU DNA-DIRECTED RNA BACILLUS SUBTILIS 55-107 POLYMERASE ALPHA CHAIN PRPOA.sub.-- ECOLI A-DIRECTED RNA ESCHERICHIA COLI & 57-105 POLYMERASE ALPHA CHAIN SALMONELLA TYPHIMURIUM PRPOA.sub.-- HALHA DNA-DIRECTED RNA HALOBACTERIUM HALOBIUM 863-904 POLYMERASE SUBUNIT A PRPOA.sub.-- HALMO A-DIRECTED RNA HALOCOCCUS MORRHUAE 229-270 POLYMERASE SUBUNIT A PRPOA.sub.-- METTH DNA-DIRECTED RNA METHANOBACTERIUM 218-245 486-513 642-669 POLYMERASE SUBUNIT A THERMOAUTOTROPHICU PRPOA.sub.-- SULAC DNA-DIRECTED RNA SULFOLOBUS ACIDOCALDARIUS 222-256 500-527 693-720 POLYMERAS E SUBUNIT A PRPOA.sub.-- THECE DNA-DIRECTED RNA THERMOCOCCUS CELER 228-262 POLYMERASE SUBUNIT A' PRPOB.sub.-- ECOLI DNA-DIRECTED RNA ESCHERICHIA COLI 599-626 1011-1038 POLYMERASE BETA CHAIN PRPOB.sub.-- MYCLE DNA-DIRECTED RNA MYCOBACTERIUM LEPRAE 723-760 1084-1111 POLYMERASE BETA CHAIN PRPOB.sub.-- SALTY A-DIRECTED RNA SALMONELLA TYPHIMURIUM 599-626 958-985 1011-1038 POLYMERASE BETA CHAIN PRPOB.sub.-- SULAC A-DIRECTED RNA SULFOLOBUS ACIDOCALDARIUS 160-187 255-282 534-561 827-861 POLYMERASE SUBUNIT B PRPOB.sub.-- THEMA A-DIRECTED RNA THERMOTOGA MARITIMA 350-377 POLYMERASE BETA CHAIN PRPOC.sub.-- ANASP DNA-DIRECTED RNA ANABAENA SP 152-194 POLYMERASE GAMMA CHAIN PRPOC.sub.-- ECOLI DNA-DIRECTED RNA ESCHERICHIA COLI 786-813 948-994 1223-1257 POLYMERASE BETA' CHAIN PRPOC.sub.-- HALHA DNA-DIRECTED RNA HALOBACTERIUM HALOBIUM 175-202 POLYMERASE SUBUNIT C PRPOC.sub.-- HALMO DNA-DIRECTED RNA HALOCOCCUS MORRHUAE 27-54 117-144 207-234 POLYMERASE SUBUNIT C PRPOC.sub.-- METTH DNA-DIRECTED RNA METHANOBACTERIUM 58-85 272-302 327-354 POLYMERASE SUBUNIT C THERMOAUTOTROPHICU PRPOC.sub.-- MYCLE A-DIRECTED RNA MYCOBACTERIUM LEPRAE 273-300 860-887 911-938 1131-1158 POLYMERASE BETA' CHAIN PRPOC.sub.-- NOSCO DNA-DIRECTED RNA NOSTOC COMMUNE 150-192 POLYMERASE GAMMA CHAIN PRPOC.sub.-- SULAC DNA-DIRECTED RNA SULFOLOBUS ACIDOCALDARIUS 36-63 172-214 224-251 POLYMERASE SUBUNIT C PRPOC.sub.-- THECE DNA-DIRECTED RNA THERMOCOCCUS CELER 21-58 POLYMERASE SUBUNIT A" PRPOD.sub.-- NOSCO DNA-DIRECTED RNA NOSTOC COMMUNE 72-116 402-449 539-566 POLYMERASE DELTA CHAIN PRPOE.sub.-- ECOLI RNA POLYMERASE SIGMA-E ESCHERICHIA COLI 5-39 FACTOR PRPOS.sub.-- ECOLI RNA POLYMERASE SIGMA ESCHERICHIA COLI 281-308 FACTOR KATF PRPOU.sub.-- HALHA DNA-DIRECTED RNA HALOBACTERIUM HALOBIUM 91-118 POLYMERASE SUBUNIT B' PRPSA.sub.-- AGRTU RNA POLYMERASE SIGMA-A AGROBACTERIUM TUMEFACIENS 310-347 397-427 FACTOR PRPSA.sub.-- ANASP RNA POLYMERASE SIGMA-A ANABAENA SP 71-105 FACTOR PRPSA.sub.-- CLOAB RNA POLYMERASE SIGMA-A CLOSTRIDIUM ACETOBUTYLICUM 2-29 FACTOR PRPSA.sub.-- STRAU RNA POLYMERASE SIGMA STREPTOMYCES AUREOFACIENS 278-305 FACTOR RPOD PRPSB.sub.-- ANASP RNA POLYMERASE SIGMA-B ANABAENA SP 4-31 FACTOR PRPSB.sub.-- BACSU RNA POLYMERASE SIGMA-B BACILLUS SUBTILIS 5-35 169-196 200-230 FACTOR PRPSB.sub.-- MYXXA RNA POLYMERASE SIGMA-B MYXOCOCCUS XANTHUS 47-74 FACTOR PRPSB.sub.-- STIAU RNA POLYMERASE SIGMA-B STIGMATELLA AURANTIACA 96-123 FACTOR PRPSC.sub.-- ANASP RNA POLYMERASE SIGMA-C ANABAENA SP 58-85 FACTOR PRPSD.sub.-- BACSU RNA POLYMERASE SIGMA-D BACILLUS SUBTILIS 192-249 FACTOR PRPSE.sub.-- BACSU RNA POLYMERASE SIGMA-E BACILLUS SUBTILIS 63-90 FACTOR PRECURSOR PRPSE.sub.-- CLOAB RNA POLYMERASE SIGMA-E CLOSTRIDIUM ACETOBUTYLICUM 14-41 116-160 FACTOR PRPSF.sub.-- BACLI RNA POLYMERASE SIGMA-F BACILLUS LICHENIFORMIS 4-31 191-248 FACTOR PRPSF.sub.-- BACME RNA POLYMERASE SIGMA-F BACILLUS MEGATERIUM 191-225 FACTOR PRPSF.sub.-- BACSU RNA POLYMERASE SIGMA-F BACILLUS SUBTILIS 4-41 191-248 FACTOR PRPSH.sub.-- BACLI RNA POLYMERASE SIGMA-H BACILLUS LICHENIFORMIS 191-218 FACTOR PRPSH.sub.-- BACSU RNA POLYMERASE SIGMA-H BACILLUS SUBTILIS 186-213 FACTOR PRPSK.sub.-- BACSU RNA POLYMERASE SIGMA-K BACILLUS SUBTILIS 75-109 189-216 FACTOR PRPSP.sub.-- STAAU RNA POLYMERASE SIGMA STAPHYLOCOCCUS AUREUS 19-46 FACTOR PLAC PRPSW.sub.-- STRCO RNA POLYMERASE SIGMA STREPOMYCES COELICOLOR 232-273 FACTOR WHIG PRPSX.sub.-- BACTK POSSIBLE RNA POLYMERASE BACILLUS THURINGIENSIS 33-60 SIGMA-G FACTOR PRS10.sub.-- ECOLI 30S RIBOSOMAL PROTEIN S10 ESCHERICHIA COLI 3-30 PRS11.sub.-- BACSU 30S RIBOSOMAL PROTEIN S11 BACILLUS SUBTILIS 8-42 PRS13.sub.-- BACSU 30S RIBOSOMAL PROTEIN S13 BACILLUS SUBTILIS 44-85 PRS17.sub.-- METVA 30S RIBOSOMAL PROTEIN S17 METHANOCOCCUS VANNIELII 34-73 PRS1.sub.-- ECOLI 30S RIBOSOMAL PROTEIN S1 ESCHERICHIA COLI 99-126 144-171 PRS1.sub.-- PROSP 30S RIBOSOMAL PROTEIN S1 PROVIDENCIA SP 39-66 265-292 349-376 PRS1.sub.-- RHIME 30S RIBOSOMAL PROTEIN S1 RHIZOBIUM MELILOTI 91-125 172-217 PRS21.sub.-- BACST 30S RIBOSOMAL PROTEIN S21 BACILLUS STEAROTHERMOPHILUS 1-28 PRS2.sub.-- SPICI 30S RIBOSOMAL PROTEIN S2 SPIROPLASMA CITRI 91-125 PRS3.sub.-- ACHLA 30S RIBOSOMAL PROTEIN S3 ACHOLEPLASMA LAIDLAWII 83-110 PRS3.sub.-- MYCCA 30S RIBOSOMAL PROTEIN S3 MYCOPLASMA CAPRICOLUM 77-106 136-163 PRS4.sub.-- ECOLI 30S RIBOSOMAL PROTEIN S4 ESCHERICHIA COLI 50-77 PRS5.sub.-- HALMA 30S RIBOSOMAL PROTEIN S5 HALOARCULA MARISMORTUI 160-187 PRS5.sub.-- MYCCA 30S RIBOSOMAL PROTEIN S5 MYCOPLASMA CAPRICOLUM 35-62 182-216 PRS6.sub.-- THETH 30S RIBOSOMAL PROTEIN S6 THERMUS AQUATICUS 16-43 PRS7.sub.-- METVA 30S RIBOSOMAL PROTEIN S7 METHANOCOCCUS VANNIELII 69-96 PRS7.sub.-- MYCLE 30S RIBOSOMAL PROTEIN S7 MYCOBACTERIUM LEPRAE 22-49 PRS8.sub.-- MICLU 30S RIBOSOMAL PROTEIN S8 MICROCOCCUS LUTEUS 103-130 PRS8.sub.-- MYCCA 30S RIBOSOMAL PROTEIN S8 MYCOPLASMA CAPRICOLUM 41-78 PRSGA.sub.-- ECOLI FERRITIN LIKE PROTEIN ESCHERICHIA COLI 80-107 PRT67.sub.-- ECOLI RNA-DIRECTED DNA ESCHERICHIA COLI 225-268 POLYMERASE PSACB.sub.-- BACAM LEVANSUCRASE PRECURSOR BACILLUS AMYLOLIQUEFACIENS 175-202 254-281 PSACB.sub.-- BACSU LEVANSUCRASE PRECURSOR BACILLUS SUBTILIS 175-202 254-288 PSACB.sub.-- STRMU LEVANSUCRASE PRECURSOR STREPTOCOCCUS MUTANS 31-65 155-189 314-369 PSACQ.sub .-- BACLI SACQ REGULATORY FACTOR BACILLUS LICHENIFORMIS 2-46 PSACT.sub.-- BACSU SACPA OPERON ANTI- BACILLUS SUBTILIS 102-129 189-216 TERMINATOR PSAGP.sub.-- STRPY STREPTOCOCCAL ACID STREPTOCOCCUS PYOGENES 294-331 362-389 GLYCOPROTEIN PSAOX.sub.-- BACSN SARCOSINE OXIDASE BACILLUS SP 350-377 PSAS2.sub.-- CLOBI SPORE PROTEIN CLOSTRIDIUM BIFERMENTANS 17-47 PSASG.sub.-- BACCE SPORE PROTEIN GAMMA- BACILLUS CEREUS 31-58 TYPE PSASG.sub.-- BACST SPORE PROTEIN GAMMA- BACILLUS STEAROTHERMOPHILUS 37-64 TYPE PSBCC.sub.-- ECOLI EXONUCLEASE SBCC ESCHERICHIA COLI 218-260 337-364 535-585 622-656 778-812 821-865 915-942 PSBCD.sub.-- ECOLI EXONUCLEASE SBCD ESCHERICHIA COLI 137-164 334-397 PSBM.sub.-- ECOLI SBM PROTEIN ESCHERICHIA COLI 5-32 436-470 553-580 PSBP.sub.-- BACSU SBP PROTEIN BACILLUS SUBTILIS 28-55 PSCPA.sub.-- STRPY C5A PEPTIDASE PRECURSOR STREPTOCOCCUS PYOGENES 126-160 784-811 831-880 PSCRB.sub.-- KLEPN SUCROSE-6-PHOSPHATE KLEBSIELLA PNEUMONIAE 174-201 HYDROLASE PSCRB.sub.-- LACLA SUCROSE-6-PHOSPHATE LACTOCOCCUS LACTIS 182-217 354-385 395-422 HYDROLASE PSCRB.sub.-- STRMU SUCROSE-6-PHOSPHATE STREPTOCOCCUS MUTANS 335-362 HYDROLASE PSCRK.sub.-- SALTH FRUCTOKINASE SALMONELLA THOMPSON 97-124 PSCRK.sub.-- SALTY FRUCTOKINASE SALMONELLA TYPHIMURIUM 183-210 PSCRY.sub.-- KLEPN SUCROSE PORIN PRECURSOR KLEBSIELLA PNEUMONIAE 61-88 240-267 PSCRY.sub.-- SALTY SUCROSE PORIN PRECURSOR SALMONELLA TYPHIMURIUM 16-54 61-88 240-267 PSECA.sub.-- BACSU PREPROTEIN TRANSLOCASE BACILLUS SUBTILIS 12-39 226-260 SECA SUBUNIT PSECA.sub.-- ECOLI PREPROTEIN TRANSLOCASE ESCHERICHIA COLI 360-387 453-481 SECA SUBUNIT PSECB.sub.-- ECOLI PROTEIN-EXPORT PROTEIN ESCHERICHIA COLI 41-68 SECB PSECD.sub.-- ECOLI PROTEIN-EXPORT ESCHERICHIA COLI 46-73 378-412 MEMBRANE PROTEIN SECD PSECF.sub.-- ECOLI PROTEIN-EXPORT ESCHERICHIA COLI 174-201 MEMBRANE PROTEIN SECF PSECY.sub.-- ECOLI PREPROTEIN TRANSLOCASE ESCHERICHIA COLI 101-128 SECY SUBUNIT PSECY.sub.-- LACLA PREPROTEIN TRANSLOCASE LACTOCOCCUS LACTIS 403-430 SECY SUBUNIT PSECY.sub.-- METVA PREPROTEIN TRANSLOCASE METHANOCOCCUS VANNIELII 131-161 396-423 SECY SUBUNIT PSECY.sub.-- STACA PREPROTEIN TRANSLOCASE STAPHYLOCOCCUS CARNOSUS 149-191 SECY SUBUNIT PSEFC.sub.-- SALEN SEFC PROTEIN PRECURSOR SALMONELLA ENTERITIDIS 137-164 475-535 PSERA.sub.-- BACSU D-3-PHOSPHOGLYCERATE BACILLUS SUBTILIS 16-43 347-374 DEHYDROGENASE PSFAA.sub.-- ECOLI 5-FIMBRIAL PROTEIN ESCHERICHIA COLI 11-38 SUBUNIT PRECURSOR PSFSA.sub.-- ECOLI SUGAR FERMENTATION ESCHERICHIA COLI 81-115 STIMULATION PROTEIN PSFUA.sub.-- SERMA IRON-TRANSPORT SFUA SERRATIA MARCESCENS 34-61 PROTEIN PRECURSOR PSHUI.sub.-- ECOLI SHUFFLON PROTEIN A ESCHERICHIA COLI 224-262 PSHU2.sub.-- ECOLI SHUFFLON PROTEIN A' ESCHERICHIA COLI 224-262 PSHU3.sub.-- ECOLI SHUFFLON PROTEIN B ESCHERICHIA COLI 224-262 PSHU4.sub.-- ECOLI SHUFFLON PROTEIN B' ESCHERICHIA COLI 224-262 PSHU5.sub.-- ECOLI SHUFFLON PROTEIN C ESCHERICHIA COLI 224-262 402-429 PSHU6.sub.-- ECOLI SHUFFLON PROTEIN C' ESCHERICHIA COLI 224-262 PSHU7.sub.-- ECOLI SHUFFLON PROTEIN D' ESCHERICHIA COLI 224-262 PSINR.sub.-- BACLI SINR PROTEIN BACILLUS LICHENIFORMIS 9-36 43-80 PSINR.sub.-- BACSU SINR PROTEIN BACILLUS SUBTILIS 9-36 43-70 PSLAP.sub.-- ACEKI CELL SURFACE PROTEIN ACETOGENIUM KIVUI 237-264 282-309 313-453 458-489 517-544 563-593 641-685 726-753 PRECURSOR PSLPA.sub.-- ECOLI PROPHAGE CP4-57 ESCHERICHIA COLI 93-136 INTEGRASE PSMF.sub.-- ECOLI SMF PROTEIN ESCHERICHIA COLI 24-51 PSMPB.sub.-- ECOLI SMALL PROTEIN B ESCHERICHIA COLI 27-61 90-117 PSMP.sub.-- ECOLI SMP PROTEIN PRECURSOR ESCHERICHIA COLI 71-98 PSMTB.sub.-- SYNP7 TRANSCRIPTIONAL SYNECHOCOCCUS SP 62-96 REPRESSOR 5MTB PSODF.sub.-- COXBU SUPEROXIDE DISMUTASE COXIELLA BURNETII 116-143 PSODF.sub.-- ECOLI SUPEROXIDE DISMUTASE ESCHERICHIA COLI 115-142 PSODF.sub.-- METTH SUPEROXIDE DISMUTASE METHANOBACTERIUM 25-52 THERMOAUTOTROPHICU PSODF.sub.-- PHOLE SUPEROXIDE DISMUTASE PHOTOBACTERIUM LEIOGNATHI 22-63 PSODM.sub.-- PROFR SUPEROXIDE DISMUTASE PROPIONIBACTERIUM 164-191 FREUDENREICHII PSOHB.sub.-- ECOLI SOHB PROTEIN PRECURSOR ESCHERICHIA COLI 7-48 70-97 273-300 PSOPB.sub.-- ECOLI SOPB PROTEIN ESCHERICHIA COLI 252-279 PSOXR.sub.-- ECOLI SOXR PROTEIN ESCHERICHIA COLI 16-63 PSP0J.sub.-- BACSU STAGE 0 SPORULATION BACILLUS SUBTILIS 131-158 PROTEIN J PSP2A.sub.-- BACME STAGE II SPORULATION BACILLUS MEGATERIUM 19-53 PROTEIN AA PSP2A.sub.-- BACSU STAGE II SPORULATION BACILLUS SUBTILIS 21-55 PROTEIN AA PSP2B.sub.-- BACLI STAGE II SPORULATION BACILLUS LICHENIFORMIS 42-69 PROTEIN AB PSP2B.sub.-- BACME STAGE II SPORULATION BACILLUS MEGATERIUM 36-73 PROTEIN AB PSP2D.sub.-- BACSU STAGE II SPORULATION BACILLUS SUBTILIS 134-161 PROTEIN D PSP2G.sub.-- BACTK POSSIBLE ASPARTYL BACILLUS THURINGIENSIS 4-36 117-144 PROTEASE PSP2J.sub.-- BACSU STAGE II SPORULATION BACILLUS SUBTILIS 14-44 463-500 PROTEIN J PSP3D.sub.-- BACSU STAGE III SPORULATION BACILLUS SUBTILIS 9-36 52-86 PROTEIN D PSP3J.sub.-- BACSU STAGE III SPORULATION BACILLUS SUBTILIS 44-75 PROTEIN J PRECURSOR PSP4A.sub.-- BACSU STAGE IV SPORULATION BACILLUS SUBTILIS 139-180 PROTEIN A PSP4B.sub.-- BACSU STAGE IV SPORULATION BACILLUS SUBTILIS 39-66 PROTEIN B PSP4G.sub.-- BACSU STAGE IV SPORULATION BACILLUS SUBTILIS 251-278 PROTEIN FB PSP5A.sub.-- BACSU STAGE V SPORULATION BACILLUS SUBTILIS 9-36 PROTEIN AF PSPAA.sub.-- STRDO ANTIGEN I STREPTOCOCCUS DOWNEI 184-218 PSPAB.sub.-- BACSU SUBTILIN BIOSYNTHESIS BACILLUS SUBTILIS 181-208 117 KD PROTEIN PSPAC.sub.-- BACSU SUBTILIN BIOSYNTHESIS BACILLUS SUBTILIS 311-338 PROTEIN SPAC PSPAK.sub.-- BACSU SENSOR PROTEIN SPAK BACILLUS SUBTILIS 80-107 224-251 290-324 PSPAP.sub.-- STRMU CELL SURFACE ANTIGEN I/ STREPTOCOCCUS MUTANS 122-276 281-465 538-565 576-630 1071-1098 1155-1182 1377-1430 II PRECURSOR PSPAR.sub.-- BACSU REGULATORY PROTEIN BACILLUS SUBTILIS 4-31 172-199 PSPAT.sub.-- BACSU SUBTILIN TRANSPORT BACILLUS SUBTILIS 55-82 226-267 PROTEIN SPAT PSPEC.sub.-- STRPY EXOTOXIN TYPE C STREPTOCOCCUS PYOGENES 12-39 PRECURSOR PSPIR.sub.-- SPICI SPIRALIN SPIROPLASMA CITRI 82-109 155-182 PSPIR.sub.-- SPIME SPIRALIN SPIROPLASMA MELLIFERUM 195-222 PSPOT.sub.-- ECOLI GUAN-3',5'-BIS(DIPHOS) 3'- ESCHERICHIA COLI 637-664 PYROPHOSPHOHYDROLA PSPPA.sub.-- ECOLI PROTEASE IV ESCHERICHIA COLI 278-305 PSQHC.sub.-- ZYMMO SQUALENE-HOPENE CYCLASE ZYMOMONAS MOBILIS 590-617 PSRFA.sub.-- BACSU SURFACTIN SYNTHETASE BACILLUS SUBTILIS 159-186 244-271 SUBUNIT A PSRP5.sub.-- ECOLI SIGNAL RECOGNITION ESCHERICHIA COLI 301-328 PARTICLE PROTEIN PSRP5.sub.-- MYCMY SIGNAL RECOGNITION MYCOPLASMA MYCOIDES 21-65 107-141 394-428 PARTICLE PROTEIN PSSA1.sub.-- PASHA SEROTYPE-SPECIFIC ANTIGEN PASTEURELLA HAEMOLYTICA 151-178 358-385 465-518 529-570 860-904 1 PRECURSOR PSSAB.sub.-- STRPA ADHESION B PRECURSOR STREPTOCOCCUS PARASANGUIS 32-59 PSSAB.sub.-- STRSA ADHESION B PRECURSOR STREPTOCOCCUS SANGUIS 21-59 101-128 PSSB.sub.-- ECOLI SINGLE-STRAND BINDING ESCHERICHIA COLI 68-95 PROTEIN PSSB.sub.-- PROMI SINGLE-STRAND BINDING PROTEUS MIRABILIS 63-104 PROTEIN PSSB.sub.-- SERMA SINGLE-STRAND BINDING SERRATIA MERCESCENS 63-104 PROTEIN PSSP5.sub.-- STRSA AGGLUTININ RECEPTOR STREPTOCOCCUS SANGUIS 131-173 178-287 295-483 565-592 676-710 1081-1131 PRECURSOR PSTAV.sub.-- STRAV STREPTAVIDIN PRECURSOR STREPTOMYCES AVIDINII 125-152 PSTA.sub.-- ECOLI STREPTOTHRICIN ACETYL- ESCHERICHIA COLI 66-91 TRANSFERASE PSTC1.sub.-- STAAU STAPHYLOCOAGULASE STAPHYLOCOCCUS AUREUS 90-119 172-199 280-311 PRECURSOR PSTC2.sub.-- STAAU STAPHYLOCOAGULASE STAPHYLOCOCCUS AUREUS 90-117 264-291 PRECURSOR PSTC.sub.-- CLOBE L-TRANSD TRANSC CONTROL CLOSTRIDIUM BEIJERINCKII 47-74 PROTEIN PSTPA.sub.-- ECOLI STPA PROTEIN ESCHERICHIA COLI 36-63 PSTR1.sub.-- STRGR INOSAMINE-PHOSPHATE STREPTOMYCES GRISEUS 183-210 AMIDINOTRANSFERASE 1 PSTRP.sub.-- STREQ STREPTOKINASE C STREPTOCOCCUS EQUISIMILIS 209-236 281-308 PRECURSOR PSTRP.sub.-- STRPY STREPTOKINASE A STREPTOCOCCUS PYOGENES 209-236 PRECURSOR PSTRP.sub.-- STRSP STREPTOKINASE G STREPTOCOCCUS SP 209-236 281-308 PRECURSOR PSUBE.sub.-- BACSU MINOR EXTRACELLULAR BACILLUS SUBTILIS 435-462 522-563 639 PROTEASE EPR PREC PSUBF.sub.-- BACSU BACILLOPEPTIDASE F BACILLUS SUBTILIS 40-67 89-116 121-148 554-597 PRECURSOR PSUBI.sub.-- SALTY SULFATE-BINDING PROTEIN SALMONELLA TYPHIMURIUM 37-74 PSUBI.sub.-- SYNP7 SULFATE-BINDING PROTEIN SYNECHOCOCCUS SP 63-94 PRECURSOR PSUBI.sub.-- SYNY3 SULFATE-BINDING PROTEIN SYNECHOCYSTIS SP 64-91 PRECURSOR PSUBT.sub.-- BACLI SUBTILISIN CARLSBERG BACILLUS LICHENIFORMIS 191-222 PRECURSOR PSUBT.sub.-- BACMS SUBTILISIN BACILLUS MESENTERICUS 91-118 PSUBT.sub.-- BACS9 SUBTILISIN PRECURSOR BACILLUS SP 36-63 250-277 PSUBT.sub.-- BACSA SUBTILISIN AMYLO- BACILLUS SUBTILIS 197-224 SACCHARITICUS PRECURSOR PSUBT.sub.-- BACSD SUBTILISIN BACILLUS SUBTILIS 86-117 PSUBT.sub.-- BACST SUBTILISIN J PRECURSOR BACILLUS STEAROTHERMOPHILUS 197-224 PSUBT.sub.-- BACSU SUBTILISIN E PRECURSOR BACILLUS SUBTILIS 197-224 PSUBV.sub.-- BACSU MINOR EXTRACELLULAR BACILLUS SUBTILIS 55-108 613-654 741-768 PROTEASE VPR PRECUR PSUCC.sub.-- ECOLI SUCCINYL-COA SYNTHETASE ESCHERICHIA COLI 62-89 SYNTHETASE BETA PSUCP.sub.-- AGRVI SUCROSE PHOSPHORYLASE AGROBACTERIUM VITIS 449-476 PSULA.sub.-- ENTAE CELL DIVISION INHIBITOR ENTEROBACTER AEROGENES 112-139 PSYA.sub.-- ECOLI ALANYL-TRNA SYNTHETASE ESCHERICHIA COLI 257-287 725-752 790-821 PSYD.sub.-- ECOLI ASPARTYL-TRNA ESCHERICHIA COLI 330-357 SYNTHETASE PSYE.sub.-- BACST GLUTAMYL-TRNA BACILLUS STEAROTHERMOPHILUS 49-76 SYNTHETASE PSYE.sub.-- BACSU GLUTAMYL-TRNA BACILLUS SUBTILIS 49-76 351-386 SYNTHETASE PSYE.sub.-- THETH GLUTAMYL-TRNA THERMUS AQUATICUS 405-432 SYNTHETASE PSYFA.sub.-- BACSU PHENYLALANYL-TRNA BACILLUS SUBTILIS 7-34 SYNTHETASE A CHAIN PSYFB.sub.-- BACSU PHENYLALANYL-TRNA BACILLUS SUBTILIS 340-367 407-441 SYNTHETASE BETA CHAIN PSYFB.sub.-- ECOLI PHENYLALANYL-TRNA ESCHERICHIA COLI 546-573 607-634 744-771 SYNTHETASE BETA CHAIN PSYGB.sub.-- ECOLI GLYCYL-TRNA SYNTHETASE ESCHERICHIA COLI 354-381 487-514 BETA CHAIN PSYH.sub.-- STREQ HISTIDYL-TRNA SYNTHETASE STREPTOCOCCUS EQUISIMILIS 376-403 PSYI.sub.-- METTH ISOLEUCYL-TRNA METHANOBACTERIUM 1010-1037 SYNTHETASE T HERMOAUTOTROPHICU PSYK1.sub.-- ECOLI LYSYL-TRNA SYNTHETASE ESCHERICHIA COLI 283-310 PSYK2.sub.-- ECOLI LYSYL-TRNA SYNTHETASE, ESCHERICHIA COLI 45-72 283-310 HEAT INDUCIBLE PSYL.sub.-- ECOLI LEUCYL-TRNA SYNTHETASE ESCHERICHIA COLI 220-247 PSYM.sub.-- BACST METHIONYL-TRNA BACILLUS STEAROTHERMOPHILUS 69-99 SYNTHETASE PSYM.sub.-- ECOLI METHIONYL-TRNA ESCHERICHIA COLI 87-124 SYNTHETASE PSYP.sub.-- ECOLI PROLYL-TRNA SYNTHETASE ESCHERICHIA COLI 541-568 PSYQ.sub.-- ECOLI GLUTAMINYL-TRNA ESCHERICHIA COLI 394-421 SYNTHETASE PSYRD.sub.-- PSESY SYRD PROTEIN PSEUDOMONAS SYRINGAE 449-483 PSYR.sub.-- ECOLI ARGINYL-TRNA SYNTHETASE ESCHERICHIA COLI 540-574 PSYT1.sub.-- BACSU THREONYL-TRNA BACILLUS SUBTILIS 401-428 605-639 SYNTHETASE PSYV.sub.-- BACST VALYL-TRNA SYNTHETASE BACILLUS STEAROTHERMOPHILUS 603-630 809-843 PSYV.sub.-- ECOLI VALYL-TRNA SYNTHETASE ESCHERICHIA COLI 300-327 882-912 924-951 PSYW.sub.-- BACST TRYPTOPHANYL-TRNA BACILLUS STEAROTHERMOPHILUS 204-231 239-266 SYNTHETASE PSYY1.sub.-- BACSU TYROSYL-TRNA SYNTHETASE BACILLUS SUBTILIS 81-115 375-409 1 PSYY2.sub.-- BACSU TYROSYL-TRNA SYNTHETASE BACILLUS SUBTILIS 69-96 2 PSYY.sub.-- BACCA TYROSYL-TRNA SYNTHETASE BACILLUS CALDOTENAX 295-322 372-416 PSYY.sub.-- BACST TYROSYL-TRNA SYNTHETASE BACILLUS STEAROTHERMOPHILUS 295-322 372-416 PT1M1.sub.-- ECOLI ENZYME ECOR124/3 1 M ESCHERICHIA COLI 126-167 405-432 485-512 PROTEIN PT1R1.sub.-- ECOLI ENZYME ECOR124/3 R ESCHERICHIA COLI 30-57 624-651 702-736 768-795 843-870 966-1000 PROTEIN PT1R.sub.-- ECOLI ENZYME ECOK 1 R PROTEIN ESCHERICHIA COLI 158-263 PT1S1.sub.-- ECOLI ENZYME ECOR124/3 I ESCHERICHIA COLI 154-181 SPECIFICITY PROTEIN PT1SA.sub.-- ECOLI ENZYME ECOA I SPECIFICITY ESCHERICHIA COLI 279-306 PROTEIN PT1SB.sub.-- ECOLI ENZYME ECOB I SPECIFICITY ESCHERICHIA COLI 278-312 PROTEIN PT1SD.sub.-- ECOLI ENZYME ECOD I SPECIFICITY ESCHERICHIA COLI 249-283 PROTEIN PT1SE.sub.-- ECOLI ENZYME ECOE I SPECIFICITY ESCHERICHIA COLI 279-306 PROTEIN PT1S.sub.-- SALPO ENZYME SPECIFICITY SALMONELLA POTSDAM 396-423 PROTEIN PT1S.sub.-- SALTY ENZYME SPECIFICITY SALMONELLA TYPHIMURIUM 194-221 276-304 402-429 PROTEIN PT257.sub.-- ECOLI TYPE IIS RESTRICTION ESCHERICHIA COLI 138-196 265-295 406-440 639-682 687-728 926-954 ENZYME ECO571 PT2A1.sub.-- ACICA TYPE II RESTRICTION ACINETOBACTER CALCOACETICUS 49-76 ENZYME ACCI PT2BF.sub.-- BACSU TYPE II RESTRICTION BACILLUS SUBTILIS 3-43 135-223 236-280 ENZYME BSUFI PT2BR.sub.-- BACSU TYPE II RESTRICTION BACILLUS SUBTILIS 3-45 338-384 401-430 532-559 ENZYME BSURI PT2C1.sub.-- CITFR TYPE II RESTRICTION CITROBACTER FREUNDII 35-62 ENZYME CFRBI PT2C1.sub.-- HERAU TYPE II RESTRICTION HERPETOSIPHON AURANTIACUS 176-215 ENZYME HGICI PT2C2.sub.-- HERAU TYPE II RESTRICTION HERPETOSIPHON AURANTIACUS 243-273 ENZYME HGICII PT2D1.sub.-- DESDN TYPE II RESTRICTION DESULFOVIBRIO DESULFURICANS 85-122 ENZYME DDEI PT2D1.sub.-- STRPN TYPE II RESTRICTION STREPTOCOCCUS PNEUMONIAE 213-240 ENZYME DPNI PT2E1.sub.-- ECOLI TYPE II RESTRICTION ESCHERICHIA COLI 2-29 ENZYME ECORI PT2E2.sub.-- ECOLI TYPE II RESTRICTION ESCHERICHIA COLI 333-360 ENZYME ECORII PT2E5.sub.-- ECOLI TYPE II RESTRICTION ESCHERICHIA COLI 128-155 214-241 ENZYME ECORV PT2F1.sub.-- FLAOK TYPE IIS RESTRICTION FLAVOBACTERIUM OKEANOKOITES 302-336 ENZYME FOKI PT2H1.sub.-- HAEIN TYPE II RESTRICTION HAEMOPHILUS INFLUENZAE 6-38 69-96 ENZYME HINFI PT2H1.sub.-- HAEPA TYPE II RESTRICTION HAEMOPHILUS PARAINFLUENZAE 77-125 ENZYME HPAI PT2H2.sub.-- HAEHA TYPE II RESTRICTION HAEMOPHILUS HAEMOLYTICUS 23-50 ENZYME HHAII PT2H2.sub.-- HAEIN TYPE II RESTRICTION HAEMOPHILUS INFLUENZAE 97-138 ENZYME HINCII PT2K1.sub.-- KLEPN TYPE II RESTRICTION KLEBSIELLA PENUMONIAE 18-45 178-205 ENZYME KPNI PT2M1.sub.-- MORBO TYPE II RESTRICTION MORAXELLA BOVIS 15-61 187-215 225-252 ENZYME MBOI PT2M2.sub.-- MORBO TYPE IIS RESTRICTION MORAXELLA BOVIS 3-30 158-185 337-364 ENZYME MOBOII PT2MZ.sub.-- METTF POSSIBLE TYPE II METHANOBACTERIUM 105-151 RESTRICTION ENZYME MTHZI THERMOFORMICICUM PT2NG.sub.-- NEIGO TYPE II RESTRICTION NEISSERIA GONORRHOEAE 117-144 231-258 ENZYME NGOPII PT2S1.sub.-- STRSA TYPE II RESTRICTION STREPTOCOCCUS SANGUIS 5-32 41-68 395-446 ENZYME STSI PT2S2.sub.-- SHISO TYPE II RESTRICTION SHIGELLA SONNEI 206-243 258-288 ENZYME SSOII PT2S3.sub.-- STAAU TYPE II RESTRICTION STAPHYLOCOCCUS AUREUS 70-102 ENZYME SAU3A1 PT2SI.sub.-- SALIN TYPE II RESTRICTION SALMONELLA INFANTIS 144-181 ENZYME SINI PT2SM.sub.-- SERMA TYPE II RESTRICTION SERRATIA MARCESCENS 61-88 ENZYME SMAI PT2TA.sub.-- THEAQ TYPE II RESTRICTION THERMUS AQUATICUS 147-181 203-237 ENZYME TAQI PT3MO.sub.-- ECOLI SYSTEM ECOP15 ENZYME ESCHERICHIA COLI 37-71 75-102 236-296 378-405 MOD PT3RE.sub.-- BACCE SYSTEM ENZYME RES BACILLUS CEREUS 62-89 256-283 PTA47.sub.-- TREPA 47 KD MEMBRANE ANTIGEN TREPONEMA PALLIDUM 26-53 PRECURSOR PTA53.sub.-- TREDE 53 KD MEMBRANE ANTIGEN TREPONEMA DENTICOLA 99-126 298-329 A PRECUSOR PTACY.sub.-- BACAL ALVEOLYSIN PRECURSOR BACILLUS ALVEI 272-302 374-401 PTACY.sub.-- CLOPE PERFRINGOLYSIN O CLOSTRIDIUM PERFRINGENS 270-311 372-434 PRECURSOR PTACY.sub.-- LISIV IVANOLYSIN PRECURSOR LISTERIA IVANOVII 93-120 167-195 396-423 PTACY.sub.-- LISMO LISTERIOLYSIN O LISTERIA MONOCYTOGENES 98-125 168-196 295-329 397-424 PRECURSOR PTACY.sub.-- LISSE SEELIGERIOLYSIN LISTERIA SEELIGERI 99-126 296-323 349-376 398-463 PRECURSOR PTACY.sub.-- STRPN PNEUMOLYSIN STREPTOCOCCUS PNEUMONIAE 234-272 PTACY.sub.-- STRPY STREPTOLYSIN O STREPTOCOCCUS PYOGENES 86-133 355-382 440-470 PRECURSOR PTAGB.sub.-- BACSU TECHOIC ACID BIOSYN BACILLUS SUBTILIS 42-69 PROTEIN B PREC PTACG.sub.-- BACSU TECHOIC ACID BIO- BACILLUS SUBTILIS 348-375 SYNTHESIS PROTEIN C PTAGE.sub.-- BACSU TECHOIC ACID BIO- BACILLUS SUBTILIS 59-93 144-181 185-243 565-592 600-627 SYNTHESIS PROTEIN E PTAGF.sub.-- BACSU TECHOIC ACID BIO- BACILLUS SUBTILIS 182-209 SYNTHESIS PROTEIN F PTBP1.sub.-- NEIGO TRANSFERRIN-BINDING NEISSERIA GONORRHOEAE 39-73 127-164 398-425 810-841 PROTEIN 1 PRECURSOR PTBUD.sub.-- PSEPI PHENOL 2-MONOOXYGENASE PSEUDOMONAS PICKETTII 38-65 227-254 375-402 PTCDT.sub. -- SALTY TRANSCRIPTIONAL SALMONELLA TYPHIMURIUM 105-132 REGULATORY PROTEIN TCDT PTCPC.sub.-- VIBCH MEMBRANE PROTEIN TCPC VIBRIO CHOLERAE 20-47 83-128 199-233 263-290 344-375 459-486 PTCPE.sub.-- VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE 24-59 77-111 PROTEIN TCPE PTCPF.sub.-- VIBCH TCP PILUS SECRETION VIBRIO CHOLERAE 32-66 211-238 PROTEIN TCPF PTCPH.sub.-- VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE 95-122 PROTEIN TCPH PTCIP.sub.-- VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE 25-52 234-261 279-306 346-379 PROTEIN TCPI PTCPN.sub.-- VIBCH TCP PILUS VIRULENCE VIBRIO CHOLERAE 48-75 REGULATORY PROTEIN PTCPO.sub.-- VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE 230-257 PROTEIN TCPO PTCPY.sub.-- VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE 121-148 PROTEIN TCPY PTCPZ.sub.-- VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE 44-85 PROTEIN TCPZ PTCR2.sub.-- BACSU TETRACYCLINE RESISTANCE BACILLUS SUBTILIS 404-434 PROTEIN PTCR.sub.-- BACST TETRACYCLINE RESISTANCE BACILLUS STEAROTHERMOPHILUS 422-453 PROTEIN PTCR.sub.-- STAAU TETRACYCLINE RESISTANCE STAPHYLOCOCCUS AUREUS 404-431 PROTEIN PTCR.sub.-- STRAG TETRACYCLINE RESISTANCE STREPTOCOCCUS AGALACTIAE 422-453 PROTEIN PTCR.sub.-- STRPN TETRACYCLINE RESISTANCE STREPTOCOCCUS PNEUMONIAE 422-453 PROTEIN PTDCA.sub.-- ECOLI TDCABC OPERON TRANS- ESCHERICHIA COLI 210-239 CRIPTIONAL ACTIVATOR PTDCC.sub.-- ECOLI TDCC PROTEIN ESCHERICHIA COLI 334-361 PTEE6.sub.-- STRPY STRYPSIN-RESIST SURFACE STREPTOCOCCUS PYOGENES 137-164 361-395 400-437 T6 PROTEIN PREC PTER2.sub.-- ECOLI TETRACYCLINE REPRESSOR ESCHERICHIA COLI 8-36 PROTEIN CLASS B PTER4.sub.-- ECOLI TETRACYCLINE REPRESSOR ESCHERICHIA COLI 183-210 PROTEIN CLASS D PTERA.sub.-- ALCSP TELLURIUM RESISTANCE ALCALIGENES SP 48-86 PROTEIN TERA PTESB.sub.-- ECOLI ACYL-COA THIOESTERASE II ESCHERICHIA COLI 4-31 PTET5.sub.-- ENTFA TETRACYCLINE RESISTANCE ENTEROCOCCUS FAECALIS 2-36 130-159 179-206 217-244 PROTEIN TETM PTET9.sub.-- ENTFA TETRACYCLINE RESISTANCE ENTEROCOCCUS FAECALIS 2-36 130-159 217-244 260-287 PROTEIN TETM PTETC.sub.-- ECOLI TRANSPOSON TN10 TETC ESCHERICHIA COLI 72-106 116-158 PROTEIN PTETM.sub.-- STRLI TETRACYCLINE RESISTANCE STREPTOMYCES LIVIDANS 82-109 PROTEIN PTETM.sub.-- UREUR TETRACYCLINE RESISTANCE UREAPLASMA UREALYTICUM 2-36 130-159 217-244 260-287 PROTEIN TETM PTETO.sub.-- CAMCO TETRACYCLINE RESISTANCE CAMPYLOBACTER COLI 2-29 PROTEIN TETO PTETO.sub.-- CAMJE TETRACYCLINE RESISTANCE CAMPYLOBACTER JEJUNI 2-36 PROTEIN TETO PTETO.sub.-- STRMU TETRACYCLINE RESISTANCE STREPTOCOCCUS MUTANS 2-29 PROTEIN TETO PTETX.sub.-- BACFR TETRACYCLINE RESISTANCE BACTEROIDES FRAGILIS 25-62 PROTEIN PTETX.sub.-- CLOTE TETANUS TOXIN PRECURSOR CLOSTRIDIUM TETANI 274-304 540-567 615-642 692-719 985-1012 1240-1277 PTF2B.sub.-- PYRWO TRANS INITIATION FACTOR PYROCOCCUS WOESEI 218-258 HB HOMOLOG PTFDC.sub.-- ALCEU CHLOROCATECHOL 1,2- ALCALIGENES EUTROPHUS 2-33 DIOXYGENASE PTGT.sub.-- ECOLI QUEUINE TRNA-RIBOSYL- ESCHERICHIA COLI 173-200 TRANSFERASE PTHD1.sub.-- LACLA THREONINE DEHYDRATASE LACTOCOCCUS LACTIS 267-303 BIOSYNTHETIC PTHD2.sub.-- ECOLI THREONINE DEHYDRATASE ESCHERICHIA COLI 293-320 CATABOLIC PTHDF.sub.-- BACSU FURAN OXIDATION PROTEIN BACILLUS SUBTILIS 153-180 192-226 282-316 391-418 THDF PTHDF.sub.-- ECOLI FURAN OXIDATION PROTEIN ESCHERICHIA COLI 226-260 404-431 THDF PTHDF.sub.-- PSEPU FURAN OXIDATION PROTEIN PSEUDOMONAS PUTIDA 226-260 THDF PTHER.sub.-- BACCE THERMOLYSIN BACILLUS CEREUS 4-38 240-267 PTHER.sub.-- BACST THERMOLYSIN PRECURSOR BACILLUS STEAROTHERMOPHILUS 45-72 PTHER.sub.-- BACTH THERMOLYSIN BACILLUS THERMO- 86-113 PROTEOLYTICUS PTHET.sub.-- THEVU THERMITASE THERMOACTINOMYCES VULGARIS 131-161 PTHIC.sub.-- ECOLI THIC PROTEIN ESCHERICHIA COLI 232-263 301-328 PTHIG.sub.-- ECOLI THIG PROTEIN ESCHERICHIA COLI 138-165 PTHPS.sub.-- SULAC THERMOPSIN PRECURSOR SULFOLOBUS ACIDOCALDARIUS 135-172 199-233 PTHRC.sub.-- BRELA THREONINE SYNTHASE BREVIBACTERIUM 288-315 LACTOFERMENTUM PTHTR.sub.-- SACER PUTATIVE THIOSULFATE SACCHAROPOLYSPORA ERYTHRAEA 69-96 SULFURTRANSFERASE PTIG.sub.-- ECOLI TRIGGER FACTOR ESCHERICHIA COLI 144-171 PTMPA.sub.-- TREPA TREPONEMAL MEMBRANE TREPONEMA PALLIDUM 236-266 PROTEIN A PRECURSOR PTMPB.sub.-- TREPA TREPONEMAL MEMBRANE TREPONEMA PALLIDUM 44-71 PROTEIN B PRECURSOR PTMPB.sub.-- TREPH TREPONEMAL MEMBRANE TREPONEMA PHAGEDENIS 41-68 PROTEIN B PRECURSOR PTNAB.sub.-- ECOLI LOW AFFINITY TRYPTOPHAN ESCHERICHIA COLI 74-108 PERMEASE PTNP4.sub.-- STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS 52-79 322-349 PTNP7.sub.-- ENTFA TRANSPOSON TN917 ENTEROCOCCUS FAECALIS 59-97 111-138 RESOLVASE PTNPA.sub.-- STAAU TRANSPOSASE A STAPHYLOCOCCUS AUREUS 151-178 PTNPB.sub.-- STAAU TRANSPOSASE B STAPHYLOCOCCUS AUREUS 589-625 PTNPI.sub.-- BACTU TNP I RESOLVASE BACILLUS THURINGIENSIS 7-62 65-92 174-201 PTNSB.sub.-- ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI 99-126 510-537 POSITION PROTEIN TNSB PTNSC.sub.-- ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI 32-59 314-341 POSITION PROTEIN TNSC PTNSD.sub.-- ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI 339-366 POSITION PROTEIN TNSD PTNSE.sub.-- ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI 463-490 POSITION PROTEIN TNSE PTOD1.sub.-- PSEPU TOLUENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA 36-63 ALPHA SUBUNIT PTOD2.sub.-- PSEPU TOLUENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA 119-153 BETA SUBUNIT PTODA.sub.-- PSEPU TOLUENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA 179-213 SYSTEM PTODJ.sub.-- PSEPU TODF PRODUCT HYDRATASE PSEUDOMONAS PUTIDA 143-170 PTOLA.sub.-- ECOLI TOLA PROTEIN ESCHERICHIA COLI 101-138 PTOLC.sub.-- ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI 144-178 184-211 239-266 348-375 383-443 TOLC PRECURSOR PTOP1.sub.-- SYNP7 DNA TOPOISOMERASE I SYNECHOCOCCUS SP 203-230 PTORA.sub.-- ECOLI TRIMETHYLAMINE-N-OXIDE ESCHERICHIA COLI 797-824 REDUCTASE PTOX1.sub.-- BORPE PERTUSSIS TOXIN SUBUNIT BORDETELLA PERTUSSIS 179-206 1 (S1) PRECURSOR PTOX2.sub.-- BORPE PERTUSSIS TOXIN SUBUNIT BORDETELLA PERTUSSIS 58-85 2 (S2) PRECURSOR PTOXA.sub.-- CLODI TOXIN A CLOSTRIDIUM DIFFICILE 20-88 99-159 204-231 342-369 373-414 847-962 966-994 997-1024 1348-1402 PTOXA.sub.-- PSEAE EXOTOXIN A PRECURSOR PSEUDOMONAS AERUGINOSA 470-497 PTOXB.sub.-- CLODI TOXIN B CLOSTRIDIUM DIFFICILE 38-72 133-163 199-241 825-869 923-950 1334-1388 1403-1433 1506-1565 1716-1747 PTOXS.sub.-- VIBCH TRANSMEMBRANE VIBRIO CHOLERAE 13-40 REGULATORY PROTEIN TOXS PTPF1.sub.-- TREPA ANTIGEN TPF 1 TREPONEMA PALLIDUM 106-143 PTPIS.sub.-- ECOLI TRIOSEPHOSPHATE ESCHERICHIA COLI 83-110 ISOMERASE PTPIS.sub.-- MORSP TRIOSEPHOSPHATE MORAXELLA SP 139-166 ISOMERASE PTPR.sub.-- PORGI THIOL PROTEASE PORPHYROMONAS GINGIVALIS 117-144 PRECURSOR PTR2M.sub.-- AGRT3 TRYPTOPHAN 2-MONO- AGROBACTERIUM TUMEFACIENS 239-266 501-529 OXYGENASE PTR2M.sub.-- AGRT4 TRYPTOPHAN 2-MONO- AGROBACTERIUM TUMEFACIENS 239-266 502-529 OXYGENASE PTR2M.sub.-- PSESS TRYPTOPHAN 2-MONO- PSEUDOMONAS SYRINGAE 41-68 OXYGENASE PTRA1.sub.-- STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS 58-113 PTRA2.sub.-- STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS 11-38 58-113 PTRA3.sub.-- ECOLI TRANSPOSASE ESCHERICHIA COLI 721-755 PTRA3.sub.-- RHIME TRANSPOSASE RHIZOBIUM MELILOTI 179-206 PTRA3.sub.-- STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS 33-60 68-95 PTRA4.sub.-- ECOLI TRANSPOSASE ESCHERICHIA COLI 181-208 308-340 720-754 PTRA6.sub.-- ECOLI TRANSPOSASE ESCHERICHIA COLI 51-78 PTRA6.sub.-- SHISO TRANSPOSASE SHIGELLA SONNEI 51-78 200-227 231-258 PTRA7.sub.-- ECOLI TRANSPOSASE ESCHERICHIA COLI 729-756 PTRA9.sub.-- MYCTU PUTATIVE TRANSPOSASE MYCOBACTERIUM TUBERCULOSIS 159-186 PTRAB.sub.-- BACTB IS231B PROBABLE BACILLUS THURINGINESIS 281-308 419-446 TRANSPOSASE PTRAC.sub.-- BACTB IS231C PROBABLE BACILLUS THIRINGIENSIS 281-308 419-446 TRANSPOSASE PTRAC.sub.-- STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS 4-31 45-72 PTRAX.sub.-- BACTB IS231 PROBABLE BACILLUS THURINGIENSIS 281-308 419-446 TRANSPOSASE PTRA.sub.-- BACTU TRANSPOSASE BACILLUS THURINGIENSIS 93-127 509-539 PTRA.sub.-- PSEAE TRANSPOSASE PSEUDOMONAS AERUGINOSA 127-154 721-755 PTRB1.sub.-- ECOLI TRAB PROTEIN ESCHERICHIA COLI 113-143 PTRBF.sub.-- ECOLI TRBF PROTEIN ESCHERICHIA COLI 12-39 PTRB1.sub.-- ECOLI TRB1 PROTEIN ESCHERICHIA COLI 70-97 PTRC1.sub.-- ECOLI TRAC-1 PROTEIN ESCHERICHIA COLI 1006-1058 PTRC2.sub.-- ECOLI TRAC-2 PROTEIN ESCHERICHIA COLI 1102-1149 PTRC3.sub.-- ECOLI TRAC-3 PROTEIN ESCHERICHIA COLI 884-931 PTRD1.sub.-- ECOLI TRAD PROTEIN ESCHERICHIA COLI 297-348 PTREA.sub.-- ECOLI PERIPLASMIC TREHALASE ESCHERICHIA COLI 362-403 477-508 PRECURSOR PTREC.sub.-- ECOLI AMYLOTREHALASE ESCHERICHIA COLI 280-307 PTRFA.sub.-- ECOLI TRFA TRANSCRIPTIONAL ESCHERICHIA COLI 5-32 105-132 REPRESSOR PROTEIN PTRG1.sub.-- ECOLI TRAG PROTEIN ESCHERICHIA COLI 61-88 630-657 831-858 865-895 PTRG5.sub.-- ECOLI TRAG PROTEIN ESCHERICHIA COLI 196-223 PTRG6.sub.-- ECOLI TRAG PROTEIN ESCHERICHIA COLI 195-222 518-545 PTRI1.sub.-- ECOLI TRAI PROTEIN ESCHERICHIA COLI 155-209 597-624 887-914 1350-1377 PTRI2.sub.-- ECOLI TRAI PROTEIN ESCHERICHIA COLI 155-209 597-624 887-914 1350-1377 PTRI5.sub.-- ECOLI TRAI PROTEIN ESCHERICHIA COLI 47-74 328-371 PTRJ4.sub.-- ECOLI TRAJ PROTEIN ESCHERICHIA COLI 36-63 PTRM8.sub.-- ECOLI TRAM PROTEIN ESCHERICHIA COLI 5-32 PTRMA.sub.-- ECOLI TRNA (URACIL-5-)-METHYL- ESCHERICHIA COLI 107-137 TRANSFERASE PTRMD.sub.-- ECOLI TRNA (GUANINE-N1)- ESCHERICHIA COLI 115-142 226-253 METHYLTRANSFERASE PTRPA.sub.-- BACSU TRYPTOPHAN SYNTHASE BACILLUS SUBTILIS 220-247 ALPHA CHAIN PTRPA.sub.-- CAUCR TRYPTOPHAN SYNTHASE CAULOBACTER CRESCENTUS 241-275 PTRPA.sub.-- PSEAE TRYPTOPHAN SYNTHASE PSEUDOMONAS AERUGINOSA 176-203 ALPHA CHAIN PTRPB.sub.-- ACICA TRYPTOPHAN SYNTHASE ACINETOBACTER CALCOACETICUS 79-113 BETA CHAIN PTRPB.sub.-- BACSU TRYPTOPHAN SYNTHASE BACILLUS SUBTILIS 76-103 318-345 BETA CHAIN PTRPB.sub.-- BRELA TRYPTOPHAN SYNTHASE BREVIBACTERIUM 172-199 BETA CHAIN LACTOFERMENTUM PTRPB.sub.-- LACCA TRYPTOPHAN SYNTHASE LACTOBACILLUS CASEI 83-117 BETA CHAIN PTRPB.sub.-- LACLA TRYPTOPHAN SYNTHASE LACTOBACILLUS LACTIS 77-104 164-191 BETA CHAIN PTRPB.sub.-- VIBPA TRYPTOPHAN SYNTHASE VIBRIO PARAHAEMOLYTICUS 56-83 BETA CHAIN PTRPC.sub.-- BRELA INDOLE-3-GLYCEROL BREVIBACTERIUM 229-256 PHOSPHATE SYNTHASE LACTOFERMENTUM PTRPC.sub.-- ECOLI INDOLE-3-GLYCEROL ESCHERICHIA COLI 205-232 PHOSPHATE SYNTHASE PTRPC.sub.-- LACLA INDOLE-3-GLYCEROL LACTOCOCCUS LACTIS 148-175 PHOSPHATE SYNTHASE PTRPC.sub.-- VIBPA INDOLE-3-GLYCEROL VIBRIO PARAHAEMOLYTICUS 346-376 PHOSPHATE SYNTHASE PTRPD.sub.-- ACICA ANTHRANILATE PHOSPHOR- ACINETOBACTER CALCOACETICUS 223-250 260-294 IBOSYLTRANSFERASE PTRPD.sub.-- PSEAE ANTHRANILATE PHOSPHOR- PSEUDOMONAS AERUGINOSA 205-232 IBOSYLTRANSFERASE PTRPD.sub.-- PSEPU ANTHRANILATE PHOSPHOR- PSEUDOMONAS PUTIDA 205-232 IBOSYLTRANSFERASE PTRPD.sub.-- VIBPA ANTHRANILATE PHOSPHOR- VIBRIO PARAHAEMOLYTICUS 2-29 IBOSYLTRANSFERASE PTRPE.sub.-- BACPU ANTHRANILATE SYNTHASE BACILLUS PUMILUS 33-60 COMPONENT I PTRPE.sub.-- CLOTM ANTHRANILATE SYNTHASE CLOSTRIDIUM THERMOCELLUM 165-226 COMPONENT I PTRPE.sub.-- LACLA ANTHRANILATE SYNTHASE LACTOCOCCUS LACTIS 142-191 COMPONENT I PTRPE.sub.-- LEPBI ANTHRANILATE SYNTHASE LEPTOSPIRA BIFLEXA 145-179 COMPONENT I PTRPE.sub.-- RHIME ANTHRANILATE SYNTHASE RHIZOBIUM MELILOTI 139-166 PTRPE.sub.-- SALTY ANTHRANILATE SYNTHASE SALMONELLA TYPHIMURIUM 191-218 COMPONENT I PTRPE.sub.-- SULSO ANTHRANILATE SYNTHASE SULFOLOBUS SOLFATARICUS 143-183 298-328 COMPONENT I PTRPE.sub.-- VIBPA ANTHRANILATE SYNTHASE VIBRIO PARAHAEMOLYTICUS 9-36 54-81 COMPONENT I PTRPG.sub.-- ACICA ANTHRANILATE SYNTHASE ACINETOBACTER CALCOACETICUS 12-39 COMPONENT II PTRPG.sub.-- AZOBR ANTHRANILATE SYNTHASE AZOSPIRILLUM BRASILENSE 4-31 COMPONENT II PTRPG.sub.-- ECOLI ANTHRANILATE SYNTHASE ESCHERICHIA COLI 5-32 COMPONENT II PTRPG.sub.-- LACLA ANTHRANILATE SYNTHASE LACTOCOCCUS LACTIS 4-31 COMPONENT II PTRPG.sub.-- PSEAE ANTHRANILATE SYNTHASE PSEUDOMONAS AERUGINOSA 12-39 COMPONENT II PTRPG.sub.-- SALTY ANTHRANILATE SYNTHASE SALMONELLA TYPHIMURIUM 5-32 COMPONENT II PTRPG.sub.-- SERMA ANTHRANILATE SYNTHASE SERRATIA MARCESCENS 9-43 COMPONENT II PTRPG.sub.-- SHIDY ANTHRANILATE SYNTHASE SHIGELLA DYSENTERIAE 5-32 COMPONENT II PTRPO.sub.-- PSEAE PUTATIVE TRANSCRIPTIONAL PSEUDOMONAS AERUGINOSA 147-174 REGULATOR PTRS2.sub.-- ECOLI TRANS PROTEIN ESCHERICHIA COLI 85-119 PTRT3.sub.-- ECOLI RESISTANCE PROTEIN ESCHERICHIA COLI 184-221 PRECURSOR PTRY1.sub.-- SALTY TRAY PROTEIN SALMONELLA TYPHIMURIUM 30-57 PTRYP.sub.-- STRGR TRYPSIN PRECURSOR STREPTOMYCES GRISEUS 80-107 PTSR.sub.-- STRAZ RRNA METHYLTRANSFERASE STREPTOMYCES AZUREUS 126-153 PTSST.sub.-- STAAU TOXIC SHOCK SYNDROME STAPHYLOCOCCUS AUREUS 29-63 102-129 TOXIN-1 PRECURSOR PTSX.sub.-- ECOLI CHANNEL-FORMING PROTEIN ESCHERICHIA COLI 225-252 TSX PRECURSOR PTTK.sub.-- ECOLI HYPOTHETICAL 24.3 KD ESCHERICHIA COLI 81-115 PROTEIN PTUS.sub.-- ECOLI SITE-BINDING PROTEIN ESCHERICHIA COLI 57-91 107-134 PTYCA.sub.-- BACBR TRYOCIDINE SYNTHETASE I BACILLUS BREVIS 117-147 534-561 1019-1051 PTYF1.sub.-- TREPE ANTIGEN TYF1 TREPONEMA PERTENUE 106-143 PTYRA.sub.-- BACSU POSSIBLE PREPHENATE BACILLUS SUBTILIS 244-271 312-342 DEHYDROGENASE PTYRA.sub.-- ECOLI CHORISMATE MUTASE ESCHERICHIA COLI 329-370 PTYRR.sub.-- ECOLI TRANSCRIPTIONAL ESCHERICHIA COLI 483-510 REGULATORY PROTEIN TYRR PTYSY.sub.-- LACCA THYMIDYLATE SYNTHASE LACTOBACILLUS CASEI 139-173 PTYSY.sub.-- LACLA THYMIDYLATE SYNTHASE LACTOCOCCUS LACTIS 75-109 PTYSY.sub.-- STAAU THYMIDYLATE SYNTHASE STAPHYLOCOCCUS AUREUS 69-96 PUHPB.sub.-- ECOLI SENSOR PROTEIN UHPB ESCHERICHIA COLI 276-303 316-343 PUHPB.sub.-- SALTY SENSOR PROTEIN UHPB SALMONELLA TYPHIMURIUM 276-303 316-343 PUMUC.sub.-- SALTY UMUC PROTEIN SALMONELLA TYPHIMURIUM 204-231 PUPP.sub.-- ECOLI URACIL PHOSPHORIBOSYL- ESCHERICHIA COLI 30-57 TRANSFERASE PURAA.sub.-- ECOLI URACIL PERMEASE ESCHERICHIA COLI 350-384 PURE1.sub.-- HELPY UREASE ALPHA SUBUNIT HELICOBACTER PYLORI 15-42 PURE1.sub.-- PROMI UREASE ALPHA SUBUNIT PROTEUS MIRABILIS 72-99 PURE1.sub.-- PROVU UREASE ALPHA SUBUNIT PROTEUS VULGARIS 72-99 PURE1.sub.-- UREUR UREASE ALPHA SUBUNIT UREAPLASMA UREALYTICUM 13-40 483-517 PURE2.sub.-- HELPY UREASE BETA SUBUNIT HELICOBACTER PYLORI 62-99 PURED.sub.-- HELPY UREASE OPERON URED HELICOBACTER PYLORI 17-44 PROTEIN PUREE.sub.-- PROMI UREASE ACCESSORY PROTEUS MIRABILIS 57-84 PROTEIN UREE PUREF.sub.-- KLEAE UREASE ACCESSORY KLEBSIELLA AEROGENES 20-47 PROTEIN UREF PRECURSOR PUS45.sub.-- LACLA SECRETED 45 KD PROTEIN LACTOCOCCUS LACTIS 44-98 150-223 276-303 PRECURSOR PUSHA.sub.-- ECOLI P-SUGAR HYDROLASE ESCHERICHIA COLI 56-83 PRECURSOR PUSHA.sub.-- SALTY SILENT PROTEIN USHA (0) SALMONELLA TYPHIMURIUM 56-83 PRECURSOR PUVRA.sub.-- ECOLI EXCINUCLEASE ABC ESCHERICHIA COLI 527-554 871-898 SUBUNIT A PUVRA.sub.-- MICLU EXCINUCLEASE ABC MICROCOCCUS LUTEUS 579-606 619-646 684-718 922-949 SUBUNIT A PUVRA.sub.-- PARDE EXCINUCLEASE ABC PARACOCCUS DENITRIFICANS 33-60 SUBUNIT A PUVRC.sub.-- BACSU EXCINUCLEASE ABC BACILLUS SUBTILIS 342-372 511-538 SUBUNIT C PUVRC.sub.-- ECOLI EXCINUCLEASE ABC ESCHERICHIA COLI 37-64 332-362 SUBUNIT C PUVRD.sub.-- ECOLI HELICASE II ESCHERICHIA COLI 280-307 PVANA.sub.-- ENTFC VANCOMYCIN RESISTANCE ENTEROCOCCUS FAECIUM 182-209 PROTEIN VANA PVANC.sub.-- ENTGA VANCOMYCIN RESISTANCE ENTEROCOCCUS GALLINARUM 177-211 PROTEIN VANC PVIB4.sub.-- AGRT5 VIRB4 PROTEIN PRECURSOR AGROBACTERIUM TUMEFACIENS 138-172 PVIB6.sub.-- AGRT5 VIRB6 PROTEIN AGROBACTERIUM TUMEFACIENS 190-227 PVIB6.sub.-- AGRT6 VIRB6 PROTEIN AGROBACTERIUM TUMEFACIENS 190-227 PVIB6.sub.-- AGRT9 VIRB6 PROTEIN AGROBACTERIUM TUMEFACIENS 190-227 PVIBX.sub.-- AGRT5 VIRB10 PROTEIN AGROBACTERIUM TUMEFACIENS 32-59 212-239 PVIBX.sub.-- AGRT6 VIRB10 PROTEIN AGROBACTERIUM TUMEFACIENS 32-59 211-238 PVIBX.sub.-- AGRT9 VIRB10 PROTEIN AGROBACTERIUM TUMEFACIENS 32-59 212-239 PVIC1.sub.-- AGRRA VIRC1 PROTEIN AGROBACTERIUM RHIZOGENES 81-108 TUMEFACIENS PVIC1.sub.-- AGRT5 VIRC1 PROTEIN AGROBACTERIUM TUMEFACIENS 81-108 PVIC1.sub.-- AGRT6 VIRC1 PROTEIN AGROBACTERIUM TUMEFACIENS 81-108 PVID3.sub.-- AGRRA VIRD3 PROTEIN AGROBACTERIUM RHIZOGENES 149-176 265-292 PVIRA.sub.-- AGRT5 WIDE HOST RANGE (WHR) AGROBACTERIUM TUMEFACIENS 42-76 113-147 657-684 VIRA PROTEIN PVIRA.sub.-- AGRT6 WIDE HOST RANGE (WHR) AGROBACTERIUM TUMEFACIENS 42-69 84-125 653-680 VIRA PROTEIN PVIRA.sub.-- AGRT9 WIDE HOST RANGE (WHR) AGROBACTERIUM TUMEFACIENS 42-69 84-125 653-680 VIRA PROTEIN PVIRB.sub.-- SHIFL VIRB TRANSCRIPTIONAL SHIGELLA FLEXNERI 37-71 107-134 187-214 252-291 ACTIVATOR PVIRF.sub.-- YEREN VIRULENCE REGULON YERSINIA ENTEROCOLITICA 16-46 TRANSACTIVATOR PVIRG.sub.-- AGRRA VIRG REGULATORY PROTEIN AGROBACTERIUM RHIZOGENES 34-61 PVIRL.sub.-- AGRT6 LIMITED HOST RANGE (LHR) AGROBACTERIUM TUMEFACIENS 106-157 VIRA PROTEIN PVISC.sub.-- ECOLI VISC PROTEIN ESCHERICHIA COLI 47-74 PVLPA.sub.-- MYCHR VARIANT SURFACE ANTIGEN MYCOPLASMA HYORHINIS 74-112 A PRECURSOR PVM03.sub.-- BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII 54-81 PROTEIN 3 PRECURSOR PVM07.sub.-- BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII 332-359 PROTEIN 7 PRECURSOR PVM21.sub.-- BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII 330-357 PROTEIN 21 PRECURSOR PVM24.sub.-- BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII 47-143 PROTEIN 24 PRECURSOR PVM25.sub.-- BORHE OUTER MEMBRANE LIPO- BORRELIA HERMSII 315-356 PROTEIN 25 PRECURSOR PVNFA.sub.-- AZOVI NITROGEN FIXATION AZOTOBACTER VINELANDII 158-188 218-245 PROTEIN VNFA PVNFK.sub.-- AZOCH NITROGENASE VANADIUM- AZOTOBACTER CHROOCOCCUM 68-95 IRON PROTEIN MCD 1 PVNFK.sub.-- AZOVI NITROGENASE VANADIUM- AZOTOBACTER VINELANDII 68-95 372-403 IRON PROTEIN PVRP2.sub.-- SALCH 65 KD VIRULENCE PROTEIN SALMONELLA CHOLERAE-SUIS 509-536 PVRP2.sub.-- SALDU 65 KD VIRULENCE PROTEIN SALMONELLA DUBLIN 511-538 PVSDE.sub.-- SALDU VIRULENCE PROTEIN VSDE SALMONELLA DUBLIN 3-36 PVVHB.sub.-- VIBVU CYTOLYSIN SECRETION VIBRIO VULNIFICUS 30-75 PROTEIN PWAPA.sub.-- STRMU WALL-ASSOCIATED PROTEIN STREPTOCOCCUS MUTANS 4-41 313-386 PRECURSOR PWRBA.sub.-- ECOLI TRP REPRESSOR BINDING ESCHERICHIA COLI 89-116 PROTEIN PX191.sub.-- ECOLI X POLYPEPTIDE ESCHERICHIA COLI 104-131 PX192.sub.-- ECOLI X POLYPEPTIDE ESCHERICHIA COLI 104-131 PX193.sub.-- ECOLI X POLYPEPTIDE ESCHERICHIA COLI 104-131 PXISA.sub.-- ANASP EXCISASE A ANABAENA SP 4-31 89-116 135-162 PXPRB.sub.-- ECOLI POSSIBLE INTEGRASE/ ESCHERICHIA COLI 268-295 RECOMBINASE XPRB PXYLA.sub.-- STAXY XYLOSE ISOMERASE STAPHYLOCOCCUS XYLOSUS 411-438 PXYLK.sub.-- KLEAE XYLULOSE KINASE KLEBSIELLA AEROGENES 2-29 PXYLK.sub.-- LACPE XYLULOSE KINASE LACTOBACILLUS PENTOSUS 52-79 211-238 260-287 PXYLK.sub .-- STAXY XYLULOSE KINASE STAPHYLOCOCCUS XYLOSUS 4-31 96-130 209-236 246-273 PXYLR.sub.-- BACSU XYLOSE REPRESSOR BACILLUS SUBTILIS 75-102 260-287 PXYLR.sub.-- LACPE XYLOSE REPRESSOR LACTOBACILLUS PENTOSUS 262-289 PXYLR.sub.-- STAXY XYLOSE REPRESSOR STAPHYLOCOCCUS XYLOSUS 20-64 101-158 221-255 274-301 PXYLZ.sub.-- PSEPU ELECTRON TRANSFER PSEUDOMONAS PUTIDA 51-78 104-131 COMPONENT PXYN4.sub.-- CALSA PUTATIVE ENDO-1,4- CALDOCELLUM 198-225 BETA-XYLANASE SACCHAROLYTICUM PXYNA.sub.-- BACCI O-1,4-BETA-XYLANASE BACILLUS CIRCULANS 47-74 PRECURSOR PXYNA.sub.-- BACSS ENDO-1,4-BETA-XYLANASE BACILLUS SP 173-200 PRECURSOR PXYNA.sub.-- BACSU ENDO-1,4-BETA-XYLANASE BACILLUS SUBTILIS 47-74 PRECURSOR PXYNA.sub.-- CALSA ENDO-1,4-BETA-XYLANASE A CALDOCELLUM 132-159 226-256 PRECURSOR SACCHAROLYTICUM PXYNA.sub.-- PSEFL ENDO-1,4-BETA-XYLANASE PSEUDOMONAS FLUORESCENS 33-82 PRECURSOR PXYNB.sub.-- BACPU BETA-XYLOSIDASE BACILLUS PUMILUS 459-486 PXYNB.sub.-- CALSA BETA-XYLOSIDASE CALDOCELLUM 440-474 SACCHAROLYTICUM PXYNB.sub.-- PSEFL ENDO-1,4-BETA-XYLANASE PSEUDOMONAS FLUORESCENS 51-78 251-278 317-344 475-502 PRECURSOR PXYNC.sub.-- PSEFL ALPHA-L-ARABINOFURAN- PSEUDOMONAS FLUORESCENS 51-78 251-278 OSIDASE C PRECURSOR PXYNC.sub.-- STRLI ENDO-1,4-BETA-XYLANASE STREPTOMYCES LIVIDANS 183-210 C PRECURSOR PY14K.sub.-- HALMO HYPOTHETICAL 14.9 KD HALOCOCCUS MORRHUAE 56-83 PROTEIN PY23K.sub.-- STROR HYPOTHETICAL 23.1 KD STREPTOCOCCUS ORALIS 78-105 PROTEIN PY36K.sub.-- METSM HYPOTHETICAL 36.7 KD METHANOBREVIBACTER SMITHII 128-162 172-218 PROTEIN PYAAC.sub.-- ECOLI HYPOTHETICAL 34.6 KD ESCHERICHIA COLI 271-298 PROTEIN PYAAC.sub.-- PSEFL HYPOTHETICAL 33.9 KD PSEUDOMONAS FLUORESCENS 274-301 PROTEIN PYAAM.sub.-- ECOLI HYPOTHETICAL 59.1 KD ESCHERICHIA COLI 45-72 PROTEIN PYAAP.sub.-- ECOLI HYPOTHETICAL 56.6 KD ESCHERICHIA COLI 352-379 PROTEIN PYAAQ.sub.-- ECOLI HYPOTHETICAL 28.5 KD ESCHERICHIA COLI 155-182 PROTEIN PYABC.sub.-- ECOLI HYPOTHETICAL 34.9 KD ESCHERICHIA COLI 131-158 PROTEIN PYABG.sub.-- ECOLI HYPOTHETICAL 89.7 KD ESCHERICHIA COLI 446-480 627-654 PROTEIN PYABN.sub.-- ECOLI HYPOTHETICAL 63.9 KD ESCHERICHIA COLI 428-455 PROTEIN PYAC3.sub.-- PSEAE HYPOTHETICAL 23.9 KD PSEUDOMONAS AERUGINOSA 48-75 150-177 PROTEIN PYAD2.sub.-- CLOAB HYPOTHETICAL 21.6 KD CLOSTRIDIUM ACETOBUTYLICUM 75-109 114-144 PROTEIN PYAD3.sub.-- CLOAB HYPOTHETICAL 36.9 KD CLOSTRIDIUM ACETOBUTYLICUM 132-159 165-196 210-237 PROTEIN PYAD6.sub.-- CLOAB HYPOTHETICAL PROTEIN CLOSTRIDIUM ACETOBUTYLICUM 21-55 PYADA.sub.-- YEREN INVASIN PRECURSOR YERSINIA ENTEROCOLITICA 196-230 247-274 318-381 PYADA.sub.-- YERPS INVASIN PRECURSOR YERSINIA PSEUDOTUBERCULOSIS 255-282 297-360 PYADC.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 13-40 101-131 PYAEA.sub.-- RICRI 17 KD PROTEIN RICKETTSIA RICKETTSII 107-134 PYAFB.sub.-- ECOLI HYPOTHETICAL 29.4 KD ESCHERICHIA COLI 221-248 PROTEIN PYAFD.sub.-- ECOLI HYPOTHETICAL 29.1 KD ESCHERICHIA COLI 34-71 PROTEIN PYAFE.sub.-- ECOLI HYPOTHETICAL 23.0 KD ESCHERICHIA COLI 123-150 PROTEIN PYA1B.sub.-- ESCFE HYPOTHETICAL PROTEIN ESCHERICHIA FERGUSONII 2-35 PYAM1.sub.-- SALTY PUTATIVE AMIDASE SALMONELLA TYPHIMURIUM 73-100 PYAT1.sub.-- SYNY3 HYPOTHETICAL 13.0 KD SYNECHOCYSTIS SP 26-60 PROTEIN PYATP.sub.-- MYCLE HYPO PROTEIN PUTATIVE MYCOBACTERIUM LEPRAE 23-57 91-158 511-538 ATP OPERON PYATR.sub.-- BACFI HYPOL ATP-BINDING BACILLUS FIRMUS 211-238 TRANSPORT PROTEIN PYATS.sub.-- MYCGA HYPOTHETICAL PROTEIN MYCOPLASMA GALLISEPTICUM 7-41 PYATU.sub.-- MYCGA HYPOTHETICAL PROTEIN MYCOPLASMA GALLISEPTICUM 29-56 60-87 PYAV5.sub.-- XANCV HYPOTHETICAL 50 KD XANTHOMONAS CAMPESTRIS 68-98 199-226 AVIRULENCE PROTEIN PYBAH.sub.-- ECOLI HYPOTHETICAL 24.8 KD ESCHERICHIA COLI 49-79 PROTEIN PYBBA.sub.-- ECOLI HYPOTHETICAL ABC ESCHERICHIA COLI 6-69 TRANSPORTER PYBED.sub.-- ECOLI HYPOTHETICAL 9.8 KD ESCHERICHIA COLI 51-82 PROTEIN PYBID.sub.-- ECOLI HYPOTHETICAL 14.1 KD ESCHERICHIA COLI 97-124 PROTEIN PYCAE.sub.-- ECOLI HYPOTHETICAL 24.5 KD ESCHERICHIA COLI 34-61 PROTEIN PYCBA.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 38-65 PYCBL.sub.-- BACUN HYPOTHETICAL 17.3 KD BACTEROIDES UNIFORMIS 66-100 PROTEIN PYCEA.sub.-- BACLA HYPOTHETICAL PROTEIN BACILLUS LAUTUS 111-138 PYCFC.sub.-- ECOLI HYPOTHETICAL 22.9 KD ESCHERICHIA COLI 52-79 PROTEIN PYCHR.sub.-- ALCEU HYPOTHETICAL PROTEIN ALCALIGENES EUTROPHUS 21-48 PYC1B.sub.-- ECOLI HYPOTHETICAL 20.8 KD ESCHERICHIA COLI 16-43 PROTEIN PYC1F.sub.-- ECOLI 18.6 KD PROTEIN ESCHERICHIA COLI 7-68 134-166 PYC1K.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 35-62 PYCL1.sub.-- ECOLI HYPOTHETICAL 43.3 KD ESCHERICHIA COLI 54-81 PROTEIN PYCP3.sub.-- SYNPY HYPOTHETICAL 29.3 KD SYNECHOCOCCUS SP 194-221 PROTEIN PYCP3.sub.-- SYNY3 HYPOTHETICAL 28.0 KD SYNECHOCYSTIS SP 7-34 120-154 PROTEIN PYCP5.sub.-- SYNY3 HYPOTETHICAL 39.5 KD SYNECHOCYSTIS SP 277-308 PROTEIN PYCPG.sub.-- MASLA HYPOTHETICAL PROTEIN MASTIGOCLADUS LAMINOSUS 2-29 PYCPY.sub.-- PSEA9 HYPO PHYCOCYANIN PSEUDANABAENA SP 380-407 OPERON PROTEIN Y PYCR2.sub.-- BACTK HYPOTHETICAL 29.1 KD BACILLUS THURINGIENSIS 42-84 153-180 PROTEIN PYCS5.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 32-59 PRECURSOR PYCW5.sub.-- BACSU HYPOTHETICAL PROTEIN BACILLUS SUBTILIS 3-30 59-86 PYD3M.sub.-- HERAU HYPOTHETICAL 68.4 KD HERPETOSIPHON AURANTIACUS 12-39 151-178 360-416 PROTEIN PYDBA.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 32-66 117-144 163-216 233-267 295-329 458-485 676-717 1136-1163 1499-1530 PYDBD.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 80-107 PYDDB.sub.-- ECOLI HYPOTHETICAL 86.7 KD ESCHERICHIA COLI 606-641 683-714 726-753 PROTEIN PYDDC.sub.-- ECOLI HYPOTHETICAL 80.8 KD ESCHERICHIA COLI 373-400 421-452 621-648 PROTEIN PYDDD.sub.-- ECOLI HYPOTHETICAL 24.1 KD ESCHERICHIA COLI 133-174 PROTEIN PYDEH.sub.-- ECOLI HYPOTHETICAL 20.5 KD ESCHERICHIA COLI 96-130 PROTEIN PYDEJ.sub.-- ECOLI HYPOTHETICAL 18.3 KD ESCHERICHIA COLI 4-38 PROTEIN PYDEK.sub.-- ECOLI HYPOTHETICAL 65.5 KD ESCHERICHIA COLI 333-360 524-551 565-592 PROTEIN PYDNN.sub.-- BORBU HYPOTHETICAL 11.2 KD BORRELIA BURGDORFERI 6-36 PROTEIN PYDO1.sub.-- SULSO HYPOTHETICAL 14.7 KD SULFOLOBUS SOLFATARICUS 17-58 71-103 PROTEIN PYDO3.sub.-- SULSO HYPOTHETICAL 16.9 KD SULFOLOBUS SOLFATARICUS 11-38 PROTEIN PYEBA.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 93-120 PYEBG.sub.-- ECOLI HYPOTHETICAL 10.7 KD ESCHERICHIA COLI 50-77 PROTEIN PYEEE.sub.-- ECOLI HYPOTHETICAL 38.1 KD ESCHERICHIA COLI 43-70 PROTEIN PYEEF.sub.-- ECOLI HYPO 49.8 KD TRANSPORT ESCHERICHIA COLI 147-174 PROTEIN PYEGA.sub.-- ECOLI HYPOTHETICAL IN DCD ESCHERICHIA COLI 145-172 3' REGION PYEHA.sub .-- ECOLI HYPOTHETICAL 36.9 KD ESCHERICHIA COLI 69-106 283-310 PROTEIN PYEHB.sub.-- ECOLI HYPOTHETICAL 92.3 KD ESCHERICHIA COLI 151-178 501-545 PROTEIN PYEHD.sub.-- ECOLI HYPOTHETICAL 19.1 KD ESCHERICHIA COLI 96-123 PROTEIN PYEHF.sub.-- ECOLI HYPOTHETICAL 140.0 KD ESCHERICHIA COLI 543-570 PROTEIN PYEHI.sub.-- ECOLI HYPOTHETICAL 138.1 KD ESCHERICHIA COLI 35-70 102-129 PROTEIN PYEHU.sub.-- ECOLI HYPOTHETICAL 62.1 KD ESCHERICHIA COLI 326-353 PROTEIN PYEIC.sub.-- ECOLI HYPOTHETICAL 33.6 KD ESCHERICHIA COLI 46-80 PROTEIN PYEIF.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 61-88 PYEIJ.sub.-- ECOLI HYPOTHETICAL 43.4 KD ESCHERICHIA COLI 15-42 PROTEIN PYEJA.sub.-- ECOLI HYPOTHETICAL ABC ESCHERICHIA COLI 83-110 TRANSPORTER PYEJF.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 453-480 PYEJO.sub.-- ECOLI HYPOTHETICAL 91.2 KD ESCHERICHIA COLI 399-433 PROTEIN PYFHD.sub.-- ECOLI HYPOTHETICAL 40.6 KD ESCHERICHIA COLI 175-202 PROTEIN PYFU2.sub.-- BACST HYPOTHETICAL 30.6 KD BACILLUS STEAROTHERMOPHILUS 133-160 PROTEIN PYFXK.sub.-- BRAJA HYPOTHETICAL PROTEIN BRADYRHIZOBIUM JAPONICUM 109-150 PYGAP.sub.-- BACME HYPOTHETICAL 37.7 KD BACILLUS MEGATERIUM 40-67 PROTEIN PYGFD.sub.-- ECOLI HYPOTHETICAL 29.4 KD ESCHERICHIA COLI 214-241 PROTEIN PYGGB.sub.-- ECOLI HYPOTHETICAL 30.9 KD ESCHERICHIA COLI 225-252 PROTEIN PYGGG.sub.-- ECOLI HYPOTHETICAL 31.8 KD ESCHERICHIA COLI 209-236 PROTEIN PYG12.sub.-- BACTU HYPOTHETICAL 22.8 KD BACILLUS THURINGIENSIS 26-61 PROTEIN PYG12.sub.-- PSEPU HYPOTHETICAL 32.4 KD PSEUDOMONAS PUTIDA 145-172 PROTEIN PYG1F.sub.-- ECOLI HYPOTHETICAL 48.4 KD ESCHERICHIA COLI 223-264 PROTEIN PYGL4.sub.-- BACST HYPOTHETICAL 35.5 KD BACILLUS STEAROTHERMOPHILUS 6-33 PROTEIN PYGL5.sub.-- BACST HYPOTHETICAL PROTEIN BACILLUS STEAROTHERMOPHILUS 182-209 PYGLN.sub.-- BACCE HYPOTHETICAL 15 KD BACILLUS CEREUS 79-124 PROTEIN PYGRD.sub.-- BACSU HYPOTHETICAL PROTEIN BACILLUS SUBTILIS 20-47 PYGRE.sub.-- BACSU HYPOTHETICAL 17.1 KD BACILLUS SUBTILIS 84-111 PROTEIN PYGRP.sub.-- BACSU HYPOTHETICAL 39.0 KD BACILLUS SUBTILIS 98-125 PROTEIN PYGRP.sub.-- CLOAB HYPOTHETICAL 38.8 KD CLOSTRIDIUM ACETOBUTYLICUM 160-210 PROTEIN PYGT2.sub.-- STRMU HYPOTHETICAL PROTEIN 2 STREPTOCOCCUS MUTANS 4-40 110-138 235-262 PYHAB.sub .-- ECOLI HYPOTHETICAL 20.6 KD ESCHERICHIA COLI 20-65 PROTEIN PYHAC.sub.-- ECOLI HYPOTHETICAL 45.2 KD ESCHERICHIA COLI 69-96 PROTEIN PYHAF.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 44-71 138-165 PYHBG.sub.-- ECOLI PROBABLE ABC ESCHERICHIA COLI 176-203 TRANSPORTER PYHBG.sub.-- PSEPU PROBABLE ABC PSEUDOMONAS PUTIDA 74-101 106-133 147-174 TRANSPORTER PYHBG.sub.-- THIFE PROBABLE ABC THIOBACILLUS FERROOXIDANS 113-140 TRANSPORTER PYHDF.sub.-- ECOLI HYPOTHETICAL 55.4 KD ESCHERICHIA COLI 267-297 PROTEIN PYHEM.sub.-- BACSU HYPOTHETICAL 32.0 KD BACILLUS SUBTILIS 222-253 PROTEIN PYHET.sub.-- ANASP HYPOTHETICAL PROTEIN ANABAENA SP 72-99 PYHHA.sub.-- ECOLI HYPOTHETICAL 16.6 KD ESCHERICHIA COLI 56-84 PROTEIN PYHHG.sub.-- ECOLI HYPOTHETICAL 15.1 KD ESCHERICHIA COLI 43-77 PROTEIN PYHHH.sub.-- ECOLI HYPOTHETICAL 14.5 KD ESCHERICHIA COLI 43-73 PROTEIN PYHI1.sub.-- LACLA HYPOTHETICAL PROTEIN LACTOCOCCUS LACTIS 167-194 PYHI3.sub.-- LACLA HYPOTHETICAL 38.0 KD LACTOCOCCUS LACTIS 90-124 132-159 PROTEIN PYHI6.sub.-- LACLA HYPOTHETICAL 30.7 KD LACTOCOCCUS LACTIS 92-148 PROTEIN PYHI8.sub.-- LACLA HYPOTHETICAL 30.7 KD LACTOCOCCUS LACTIS 77-104 156-183 PROTEIN PYHLB.sub.-- STAAU HYPOTHETICAL PROTEIN STAPHYLOCOCCUS AUREUS 18-67 PYHLB.sub.-- VIBCH HYPOTHETICAL 18.3 KD VIBRIO CHOLERAE 99-126 PROTEIN PYHMF.sub.-- METFE HYPOTHETICAL 32.2 KD METHANOTHERMUS FERVIDUS 106-133 PROTEIN PYHS1.sub.-- CLOAB HYPOTHETICAL 11.0 KD CLOSTRIDIUM ACETOBUTYLICUM 41-85 PROTEIN PYHSA.sub.-- CLOAB HYPOTHETICAL 20.6 KD CLOSTRIDIUM ACETOBUTYLICUM 98-125 PROTEIN PYHSC.sub.-- CLOAB HYPOTHETICAL 42.4 KD CLOSTRIDIUM ACETOBUTYLICUM 25-52 208-253 276-310 PROTEIN PYHV1.sub.-- LACHE HYPOTHETICAL PROTEIN LACTOBACILLUS HELVETICUS 93-120 127-154 PYHYA.sub.-- PSESN HYPOTHETICAL PROTEIN PSEUDOMONAS SP 217-266 PYI11.sub.-- HALHA HYPOTHETICAL 38.0 KD HALOBACTERIUM HALOBIUM 245-272 PROTEIN PYI32.sub.-- MYCTU IS986 HYPOTHETICAL 6.6 KD MYCOBACTERIUM TUBERCULOSIS 19-46 PROTEIN PYI42.sub.-- PSEAY HYPOTHETICAL 42.6 KD PSEUDOMONAS AMYLODERAMOSA 9-36 PROTEIN PYI48.sub.-- METSM ISM1 HYPOTHETICAL 48.3 KD METHANOBREVIBACTER SMITHII 73-100 154-184 338-365 PROTEIN PYI52.sub.-- HALHA HYPOTHETICAL 31 KD HALOBACTERIUM HALOBIUM 86-113 PROTEIN PYIBB.sub.-- ECOLI HYPOTHETICAL 34.0 KD ESCHERICHIA COLI 202-239 PROTEIN PYIBD.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 9-43 PYIBF.sub.-- ECOLI HYPOTHETICAL 22.6 KD ESCHERICHIA COLI 131-158 PROTEIN PYIBG.sub.-- ECOLI HYPOTHETICAL 18.1 KD ESCHERICHIA COLI 70-97 PROTEIN PYICC.sub.-- ECOLI HYPOTHETICAL 33.2 KD ESCHERICHIA COLI 143-170 PROTEIN PYICD.sub.-- ECOLI HYPOTHETICAL 31.1 KD ESCHERICHIA COLI 132-159 PROTEIN PYICE.sub.-- ECOLI HYPOTHETICAL 62.3 KD ESCHERICHIA COLI 408-435 PROTEIN PYICI.sub.-- ECOLI HYPOTHETICAL 88.1 KD ESCHERICHIA COLI 122-149 PROTEIN PYICN.sub.-- ECOLI HYPOTHETICAL 18.2 KD ESCHERICHIA COLI 76-103 PROTEIN PYICO.sub.-- ECOLI HYPOTHETICAL 49.9 KD ESCHERICHIA COLI 320-347 PROTEIN PYIDB.sub.-- ECOLI HYPOTHETICAL 13.8 KD ESCHERICHIA COLI 34-78 PROTEIN PYIDE.sub.-- ECOLI HYPOTHETICAL 58.9 KD ESCHERICHIA COLI 86-113 192-209 277-304 PROTEIN PYIDI.sub.-- ECOLI HYPOTHETICAL 15.7 KD ESCHERICHIA COLI 56-83 PROTEIN PYIDK.sub.-- ECOLI HYPOTHETICAL 62.1 KD ESCHERICHIA COLI 2-39 PROTEIN PYIDP.sub.-- ECOLI HYPOTHETICAL 27.3 KD ESCHERICHIA COLI 63-97 PROTEIN PYIEA.sub.-- ECOLI HYPOTHETICAL 49.2 KD ESCHERICHIA COLI 221-248 PROTEIN PYIEC.sub.-- ECOLI HYPOTHETICAL 60.6 KD ESCHERICHIA COLI 20-58 270-297 PROTEIN PYIEC.sub.-- ERWCH HYPOTHETICAL PROTEIN ERWINIA CHRYSANTHEMI 22-67 PYIED.sub.-- ECOLI HYPOTHETICAL 34.8 KD ESCHERICHIA COLI 86-120 PROTEIN PYIEG.sub.-- ECOLI HYPOTHETICAL 46.9 KD ESCHERICHIA COLI 293-327 PROTEIN PYIEH.sub.-- ECOLI HYPOTHETICAL 24.7 KD ESCHERICHIA COLI 51-78 PROTEIN PYIEM.sub.-- ECOLI HYPOTHETICAL 15.0 KD ESCHERICHIA COLI 73-105 PROTEIN PYIEO.sub.-- ECOLI HYPOTHETICAL 51.5 KD ESCHERICHIA COLI 201-242 380-407 PROTEIN PYIFC.sub.-- ECOLI HYPOTHETICAL 39.6 KD ESCHERICHIA COLI 175-202 PROTEIN PYIGJ.sub.-- ECOLI HYPOTHETICAL 14.0 KD ESCHERICHIA COLI 51-92 PROTEIN PYIGM.sub.-- ECOLI HYPOTHETICAL 33.7 KD ESCHERICHIA COLI 120-154 PROTEIN PYIGN.sub.-- ECOLI HYPOTHETICAL 54.7 KD ESCHERICHIA COLI 207-234 PROTEIN PYIGO.sub.-- ECOLI HYPOTHETICAL 28.1 KD ESCHERICHIA COLI 67-94 PROTEIN PYIGP.sub.-- ECOLI HYPOTHETICAL 22.3 KD ESCHERICHIA COLI 173-200 PROTEIN PYIGT.sub.-- ECOLI HYPOTHETICAL 27.8 KD ESCHERICHIA COLI 132-159 PROTEIN PYIHB.sub.-- ECOLI HYPOTHETICAL 21.2 KD ESCHERICHIA COLI 13-40 PROTEIN PYIHD.sub.-- ECOLI HYPOTHETICAL 10.3 KD ESCHERICHIA COLI 28-55 PROTEIN PYIHF.sub.-- ECOLI HYPOTHETICAL 54.1 KD ESCHERICHIA COLI 272-306 PROTEIN PYIHI.sub.-- ECOLI HYPOTHETICAL 19.1 KD ESCHERICHIA COLI 112-139 PROTEIN PYIHK.sub.-- ECOLI HYPOTHETICAL 65.4 KD ESCHERICHIA COLI 4-31 PROTEIN PYIHM.sub.-- ECOLI HYPOTHETICAL 36.9 KD ESCHERICHIA COLI 83-110 120-154 297-324 PROTEIN PYIHO.sub.-- ECOLI HYPOTHETICAL 81.8 KD ESCHERICHIA COLI 612-646 PROTEIN PYIHP.sub.-- ECOLI HYPOTHETICAL 53.1 KD ESCHERICHIA COLI 357-384 PROTEIN PYIHV.sub.-- ECOLI HYPOTHETICAL 31.9 KD ESCHERICHIA COLI 72-99 PROTEIN PYIHX.sub.-- ECOLI HYPOTHETICAL 23.5 KD ESCHERICHIA COLI 9-36 PROTEIN PYIHZ.sub.-- ECOLI HYPOTHETICAL 15.9 KD ESCHERICHIA COLI 6-33 PROTEIN PYIIP.sub.-- ECOLI HYPOTHETICAL 32.9 KD ESCHERICHIA COLI 22-63 PROTEIN PYIIU.sub.-- ECOLI HYPOTHETICAL 9.6 KD ESCHERICHIA COLI 28-71 PROTEIN PYIJC.sub.-- ECOLI HYPOTHETICAL 26.6 KD ESCHERICHIA COLI 136-163 PROTEIN PYIJH.sub.-- ECOLI HYPOTHETICAL 78.3 KD ESCHERICHIA COLI 225-263 PROTEIN PYIJK.sub.-- ECOLI HYPOTHETICAL 11.2 KD ESCHERICHIA COLI 26-53 PROTEIN PYIJO.sub.-- ECOLI HYPOTHETICAL 32.1 KD ESCHERICHIA COLI 214-241 PROTEIN PYIJP.sub.-- ECOLI HYPOTHETICAL 66.6 KD ESCHERICHIA COLI 110-137 419-446 PROTEIN PYINL.sub.-- LISMO HYPOTHETICAL 26.8 KD LISTERIA MONOCYTOGENES 7-34 PROTEIN PYIS1.sub.-- SHISO INSERTION ELEMENT IS600 SHIGELLA SONNEI 62-89 PYIS1.sub.-- STRCO IS110 HYPOTHETICAL 43.6 KD STREPTOMYCES COELICOLOR 125-152 PROTEIN PYIS3.sub.-- SHISO INSERTION LEMENT IS629 SHIGELLA SONNEI 66-100 PYISP.sub.-- BACSP HYPOTHETICAL 41.2 KD BACILLUS SP 312-339 PROTEIN PYJAG.sub.-- ECOLI HYPOTHETICAL 22.6 KD ESCHERICHIA COLI 51-78 PROTEIN PYJAJ.sub.-- ECOLI HYPOTHETICAL 20.4 KD ESCHERICHIA COLI 88-122 PROTEIN PYJBH.sub.-- ECOLI HYPOTHETICAL 78.5 KD ESCHERICHIA COLI 93-120 PROTEIN PYJBL.sub.-- ECOLI HYPOTHETICAL 9.7 KD ESCHERICHIA COLI 30-57 PROTEIN PYJBM.sub.-- ECOLI HYPOTHETICAL 26.7 KD ESCHERICHIA COLI 112-149 PROTEIN PYJBQ.sub.-- ECOLI HYPOTHETICAL 15.7 KD ESCHERICHIA COLI 2-29 PROTEIN PYJCC.sub.-- ECOLI HYPOTHETICAL 60.8 KD ESCHERICHIA COLI 38-65 414-441 451-492 PROTEIN PYJCE.sub.-- ECOLI HYPOTHETICAL 60.5 KD ESCHERICHIA COLI 454-481 PROTEIN PYJCG.sub.-- ECOLI HYPOTHETICAL 59.2 KD ESCHERICHIA COLI 394-421 PROTEIN PYJCO.sub.-- ECOLI HYPOTHETICAL 25.1 KD ESCHERICHIA COLI 91-118 PROTEIN PYJCP.sub.-- ECOLI HYPOTHETICAL 53.4 KD ESCHERICHIA COLI 242-269 PROTEIN PYJCS.sub.-- ECOLI HYPOTHETICAL 73.7 KD ESCHERICHIA COLI 366-396 PROTEIN PYJCW.sub.-- ECOLI HYPOTHETICAL ABC ESCHERICHIA COLI 50-94 TRANSPORTER PYJDA.sub.-- ECOLI HYPOTHETICAL 84.2 KD ESCHERICHIA COLI 2-29 451-485 PROTEIN PYJDB.sub.-- ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 103-134 PROTEIN PYJJA.sub.-- ECOLI HYPOTHETICAL 17.5 KD ESCHERICHIA COLI 35-69 88-129 PROTEIN PYKAB.sub.-- BACFI HYPOTHETICAL 48.8 KD BACILLUS FIRMUS 321-355 PROTEIN PYLA1.sub.-- LACAC HYPOTHETICAL PROTEIN LACTOBACILLUS ACIDOPHILUS 47-74 PYLA2.sub.-- LACAC HYPOTHETICAL 14.5 KD LACTOBACILLUS ACIDOPHILUS 15-42 PROTEIN PYLA3.sub.-- LACAC HYPOTHETICAL 14.4 KD LACTOBACILLUS ACIDOPHILUS 47-74 PROTEIN PYLAC.sub.-- SULSO HYPOTHETICAL 24.4 KD SULFOLOBUS SOLFATARICUS 23-50 PROTEIN PYLP3.sub.-- PSEPU HYPOTHETICAL 44.7 KD PSEUDOMONAS PUTIDA 186-213 314-341 PROTEIN PYLPA.sub.-- YEREN YLPA LIPOPROTEIN YERSINIA ENTEROCOLITICA 184-221 PRECURSOR PYLT3.sub.-- ANAVA HYPOTHETICAL 22.6 KD ANABAENA VARIABILIS 172-199 PROTEIN PYLUD.sub.-- LACLA HYPOTHETICAL 29.7 KD LACTOCOCCUS LACTIS 35-70 PROTEIN PYME2.sub.-- BACSU HYOPTHETICAL 35.3 KD BACILLUS SUBTILIS 52-79 PROTEIN PYMG2.sub.-- MYCGE HYPOTHETICAL 114.4 KD MYCOPLASMA GENITALIUM 56-83 159-193 420-445 981-1008 PROTEIN PRECURSOR PYNGA.sub.-- CLOPE HYPOTHETICAL PROTEIN CLOSTRIDIUM PERFRINGENS 139-166 PYNGB.sub.-- CLOPE HYPOTHETICAL 31.2 KD CLOSTRIDIUM PERFRINGENS 12-49 63-97 182-211 PROTEIN PYNI1.sub.-- METTL HYPOTHETICAL PROTEIN METHANOCOCCUS 55-89 THERMOLITHOTROPHICUS PYNQ1.sub.-- PARDE HYPOTHETICAL 9.3 KD PARACOCCUS DENITRIFICANS 52-86 PROTEIN PYNT3.sub.-- ANASP HYPOTHETICAL 28.1 KD ANABAENA SP 171-198 PROTEIN PYNT5.sub.-- ANASP HYPOTHETICAL PROTEIN ANABAENA SP 87-165 PYOHD.sub.-- ECOLI HYPOTHETICAL 21.4 KD ESCHERICHIA COLI 5-32 PROTEIN PYOHG.sub.-- ECOLI HYPOTHETICAL 43.3 KD ESCHERICHIA COLI 104-171 289-316 PROTEIN PYOJA.sub.-- ECOLI HYPOTHETICAL 15.0 KD ESCHERICHIA COLI 17-44 PROTEIN PYOJE.sub.-- ECOLI HYPOTHETICAL 93.5 KD ESCHERICHIA COLI 221-248 PROTEIN PYOJF.sub.-- ECOLI HYPOTHETICAL 9.5 KD ESCHERICHIA COLI 41-82 PROTEIN PYOJH.sub.-- ECOLI HYPOTHETICAL 54.3 KD ESCHERICHIA COLI 145-193 PROTEIN PYOJJ.sub.-- ECOLI HYPOTHETICAL 36.2 KD ESCHERICHIA COLI 94-121 PROTEIN PYOMA2.sub.-- PHOS9 HYPOTHETICAL PROTEIN IN PHOTOBACTERIUM SP 32-59 OMPH 3' REGION PYOPH.sub. -- YEREN PROTEIN-TYROSINE YERSINIA ENTEROCOLITICA 63-105 PHOSPHATASE YOPH PYOPH.sub.-- YERPS PROTEIN-TYROSINE YERSINIA PSEUDOTUBERCULOSIS 63-105 PHOSPHATASE YOPH PYOPN.sub.-- YEREN OUTER MEMBRANE PROTEIN YERSINIA ENTEROCOLITICA 23-50 66-93 235-262 YOPN PYOPN.sub.-- YERPS OUTER MEMBRANE PROTEIN YERSINIA PSEUDOTUBERCULOSIS 23-50 66-93 235-262 YOPN PYOPQ.sub.-- YEREN YOPQ PROTEIN PRECURSOR YERSINIA ENTEROCOLITICA 61-88 PYORA.sub.-- HAEIN HYPOTHETICAL 31.5 KD HAEMOPHILUS INFLUENZAE 147-174 PROTEIN PYORA.sub.-- LISMO HYPOTHETICAL 25.6 KD LISTERIA MONOCYTOGENES 32-77 PROTEIN PYORA.sub.-- PYRWO HYPOTHETICAL 24.7 KD PYROCOCCUS WOESEI 183-210 PROTEIN PYORB.sub.-- HAEIN HYPOTHETICAL 19.8 KD HAEMOPHILUS INFLUENZAE 39-66 PROTEIN PYORC.sub.-- HAEIN HYPOTHETICAL 19.9 KD HAEMOPHILUS INFLUENZAE 49-79 PROTEIN PYORE.sub.-- HAEIN 8 KD PROTEIN HAEMOPHILUS INFLUENZAE 47-74 82-109 PYORF.sub.-- HAEIN 26.8 KD PROTEIN HAEMOPHILUS INFLUENZAE 199-229 PYORH.sub.-- HAEIN HYPOTHETICAL 13.7 KD HAEMOPHILUS INFLUENZAE 7-34 PROTEIN PYORI.sub.-- HAEIN 95.4 KD PROTEIN HAEMOPHILUS INFLUENZAE 416-450 688-722 PYORQ.sub.-- BACSU HYPOTHETICAL 34 KD BACILLUS SUBTILIS 148-175 PROTEIN PYORX.sub.-- PYRWO HYPOTHETICAL PROTEIN PYROCOCCUS WOESEI 66-93 PYORZ.sub.-- LISMO HYPOTHETICAL 16.9 KD LISTERIA MONOCYTOGENES 27-54 PROTEIN PYP15.sub.-- STAAU HYPOTHETICAL 15.5 KD STAPHYLOCOCCUS AUREUS 71-98 110-137 PROTEIN PYP23.sub.-- BACSU HYPOTHETICAL 22.5 KD BACILLUS SUBTILIS 57-84 PROTEIN PYP23.sub.-- STAAU HYPOTHETICAL 22.2 KD STAPHYLOCOCCUS AUREUS 29-70 PROTEIN PYP2A.sub.-- STAAU HYPOTHETICAL 26.9 KD STAPHYLOCOCCUS AUREUS 34-104 PROTEIN PYP2B.sub.-- STAAU HYPOTHETICAL 27.0 KD STAPHYLOCOCCUS AUREUS 23-60 62-89 179-206 PROTEIN PYP2C.sub.-- STAAU HYPOTHETICAL 27.7 KD STAPHYLOCOCCUS AUREUS 13-83 129-176 PROTEIN PYP7.sub.-- AGRT4 HYPOTHETICAL PROTEIN 7 AGROBACTERIUM TUMEFACIENS 29-56 PYPA2.sub.-- LEGPN HYPOTHETICAL PROTEIN LEGIONELLA PNEUMOPHILA 94-135 PYPAS.sub.-- ENTFA HYPOTHETICAL 13 KD ENTEROCOCCUS FAECALIS 79-106 PROTEIN PYPA.sub.-- BACAN HYPOTHETICAL 21.6 KD BACILLUS ANTHRACIS 13-47 115-162 PROTEIN PYPC1.sub.-- ECOLI HYPOTHETICAL 27.6 KD ESCHERICHIA COLI 5-32 PROTEIN PYPDA.sub.-- BACSU HYPOTHETICAL 27.3 KD BACILLUS SUBTILIS 184-222 PROTEIN PYPFT.sub.-- ECOLI HYPOTHETICAL 12.6 KD ESCHERICHIA COLI 16-43 PROTEIN PYPH1.sub.-- SYNP2 HYPOTHETICAL 18.1 KD SYNECHOCOCCUS SP 34-61 PROTEIN PYP16.sub.-- CLOPE HYPOTHETICAL 19.7 KD CLOSTRIDIUM PERFRINGENS 7-34 43-77 83-149 PROTEIN PYP19.sub.-- CLOPE HYPOTHETICAL 14.5 KD CLOSTRIDIUM PERFRINGENS 2-59 PROTEIN PYPIX.sub.-- CLOPE HYPOTHETICAL 38.4 KD CLOSTRIDIUM PERFRINGENS 110-137 263-290 303-340 PROTEIN PYPIY.sub.-- PSEAE HYPOTHETICAL 38.5 KD PSEUDOMONAS AERUGINOSA 22-52 PROTEIN PYPP.sub.-- BACSU HYPOTHETICAL PROCESSING BACILLUS SUBTILIS 329-356 PROTEASE PYPQQ.sub.-- KLEPN HYPOTHETICAL PROTEIN KLEBSIELLA PNEUMONIAE 243-270 PYPS2.sub.-- PLEBO HYPOTHETICAL 13.1 KD LECTONEMA BORYANUM 27-54 PROTEIN PYPV1.sub.-- METTF HYPOTHETICAL 40.7 KD METHANOBACTERIUM 58-85 308-335 PROTEIN THERMOFORMICICUM PYPV3.sub.-- METTF HYPOTHETICAL 22.5 KD METHANOBACTERIUM 3-30 PROTEIN THERMOFORMICICUM PYPV7.sub.-- METTF HYPOTHETICAL 17.1 KD METHANOBACTERIUM 69-117 PROTEIN THERMOFORMICICUM PYPVB.sub.-- METTF HYPOTHETICAL 49.6 KD METHANOBACTERIUM 333-360 389-430 PROTEIN THERMOFORMICICUM PYPYB.sub.-- BACSU HYPOTHETICAL 72.4 KD BACILLUS SUBTILIS 602-636 PROTEIN PYPZ1.sub.-- METTF HYPOTHETICAL 40.6 KD METHANOBACTERIUM 58-85 308-335 PROTEIN THERMOFORMICICUM PYPZ2.sub.-- METTF HYPOTHETICAL 33.1 KD METHANOBACTERIUM 38-65 154-188 PROTEIN THERMOFORMICICUM PYPZ5.sub.-- METTF HYPOTHETICAL 54.1 KD METHANOBACTERIUM 193-220 226-253 381-408 PROTEIN THERMOFORMICICUM PYPZ7.sub.-- METTF HYPOTHETICAL 9.7 KD METHANOBACTERIUM 5-78 PROTEIN THERMOFORMICICUM PYR18.sub.-- THEPE HYPOTHETICAL 18.7 KD THERMOFILUM PENDENS 82-109 PROTEIN PYRB1.sub.-- HALCU HYPOTHETICAL 40 KD OF HALOBACTERIUM CUTIRUBRUM 20-51 PROTEIN GTP-BINDING PROTEIN PYREC.sub.-- SYNP2 HYPOTHETICAL 28.7 KD SYNECHOCOCCUS SP 49-76 PROTEIN PYRF0.sub.-- SALTY HYPOTHETICAL 40.6 KD SALMONELLA TYPHIMURIUM 143-190 PROTEIN PYRF2.sub.-- SALTY HYPOTHETICAL 51.0 KD SALMONELLA TYPHIMURIUM 428-455 PROTEIN PYRF5.sub.-- SALTY HYPOTHETICAL 20.6 KD SALMONELLA TYPHIMURIUM 29-56 PROTEIN PYRF6.sub.-- SALTY HYPOTHETICAL 36.6 KD SALMONELLA TYPHIMURIUM 130-157 PROTEIN PYRG2.sub.-- LACLA HYPOTHETICAL PROTEIN LACTOCOCCUS LACTIS 140-167 PYRL1.sub.-- METVA HYPOTHETICAL PROTEIN METHANOCOCCUS VANNIELII 40-93 129-156 PYRP2.sub.-- METVA HYPOTHETICAL 11.6 KD METHANOCOCCUS VANNIELII 13-40 PROTEIN PYRP2.sub.-- SULAC HYPOTHETICAL 11.5 KD SULFOLOBUS ACIDOCALDARIUS 5-51 PROTEIN PYRP3.sub.-- SULAC HYPOTHETICAL 14.5 KD SULFOLOBUS ACIDOCALDARIUS 37-71 PROTEIN PYRTP.sub.-- BACSU HYPOTHETICAL 25.3 KD BACILLUS SUBTILIS 29-56 PROTEIN PYRTS.sub.-- BACSU HYPOTHETICAL 11.4 KD BACILLUS SUBTILIS 3-30 44-81 PROTEIN PYSCB.sub.-- YEREN HYPOTHETICAL YSC OPERON YERSINIA ENTEROCOLITICA 90-121 PROTEIN B PYSCC.sub.-- YEREN YSC OPERON PROTEIN C YERSINIA ENTEROCOLITICA 38-72 365-399 PRECURSOR PYSCD.sub.-- YEREN YSC OPERON PROTEIN D YERSINIA ENTEROCOLITICA 242-269 PYSCH.sub.-- YEREN YSC OPERON PROTEIN H YERSINIA ENTEROCOLITICA 28-58 PYSCH.sub.-- YERPS YSC OPERON PROTEIN H YERSINIA PSEUDOTUBERCULOSIS 28-58 PYSCI.sub.-- YEREN YSC OPERON PROTEIN I YERSINIA ENTEROCOLITICA 49-76 PYSCI.sub.-- YERPS YSC OPERON PROTEIN I YERSINIA PSEUDOTUBERCULOSIS 49-76 PYSCJ.sub.-- YEREN YSC OPERON LIPOPROTEIN J YERSINIA ENTEROCOLITICA 99-126 PRECURSOR PYSCJ.sub.-- YEREN YSC OPERON LIPOPROTEIN J YERSINIA PSEUDOTUBERCULOSIS 99-126 PRECURSOR PYSCL.sub.-- YEREN YSC OPERON PROTEIN L YERSINIA ENTEROCOLITICA 41-68 PYSCL.sub.-- YERPS YSC OPERON PROTEIN L YERSINIA PSEUDOTUBERCULOSIS 41-68 PYSMA.sub.-- SERMA HYPOTHETICAL 9.5 KD SERRATIA MARCESCENS 11-70 PROTEIN PYSO2.sub.-- DESAM HYPOTHETICAL 28.3 KD DESULFUROLOBUS AMBIVALENS 68-109 PROTEIN PYSO3.sub.-- DESAM HYPOTHETICAL PROTEIN DESULFUROLOBUS AMBIVALENS 65-155 PYSP2.sub.-- LEPIT HYPOTHETICAL PROTEIN LEPTOSPIRA INTERROGANS 6-33 60-94 PYSR1.sub.-- MYCMY HYPOTHETICAL PROTEIN MYCOPLASMA MYCOIDES 35-99 185-227 300-327 PYSY3.sub.-- BACSU HYPOTHETICAL 19.6 KD BACILLUS SUBTILIS 72-99 PROTEIN PYSYN.sub.-- METFE HYPOTHETICAL PROTEIN METHANOTHERMUS FERVIDUS 78-105 PYT37.sub.-- STRFR HYPOTHETICAL 37.1 KD STREPTOMYCES FRADIAE 246-273 PROTEIN PYTDK.sub.-- BACSU HYPOTHETICAL 35.6 KD BACILLUS SUBTILIS 244-271 279-306 PROTEIN PYTRE.sub.-- LEPBI HYPOTHETICAL 22 KD LEPTOSPIRA BIFLEXA 84-113 PROTEIN PYTRP.sub.-- LACLA HYPOTHETICAL 13.3 KD LACTOCOCCUS LACTIS 76-112 PROTEIN PYTS1.sub.-- BACSU HYPOTHETICAL 20 KD BACILLUS SUBTILIS 37-64 PROTEIN PYTSF.sub.-- SPICI HYPOTHETICAL 23.8 KD SPIROPLASMA CITRI 102-149 PROTEIN PYX04.sub.-- BACSU HYPOTHETICAL 12.8 KD BACILLUS SUBTILIS 37-64 68-95 PROTEIN PYX06.sub.-- BACSU HYPOTHETICAL 21.0 KD BACILLUS SUBTILIS 142-169 PROTEIN PYX13.sub.-- BACSU HYPOTHETICAL 26.0 KD BACILLUS SUBTILIS 17-51 PROTEIN PYX15.sub.-- BACSU HYPOTHETICAL 61.8 KD BACILLUS SUBTILIS 165-207 262-289 PROTEIN PYX18.sub.-- BACSU HYPOTHETICAL 66.8 KD BACILLUS SUBTILIS 3-30 34-61 94-142 PROTEIN PYX19.sub.-- BACSU HYPOTHETICAL 31.3 KD BACILLUS SUBTILIS 56-83 85-112 PROTEIN PYX20.sub.-- BACSU HYPOTHETICAL 23.2 KD BACILLUS SUBTILIS 24-58 PROTEIN PYX12.sub.-- ANASP HYPOTHETICAL 18.9 KD ANABAENA SP 77-104 PROTEIN PYXYB.sub.-- CALSA HYPOTHETICAL 10.7 KD CALDOCELLUM 9-39 PROTEIN SACCHAROLYTICUM PYXYC.sub.-- CALSA HYPOTHETICAL PROTEIN CALDOCELLUM 41-94 SACCHAROLYTICUM PYZE.sub.-- ECOLI HYPOTHETICAL 16.7 KD ESCHERICHIA COLI 41-78 PROTEIN - 107 .times. 174 .times. 4 SEARCH MOTIF RESULTS SUMMARY FOR ALL HUMAN PROTEINS PCGENE 107 .times. 178 .times. 4 Motif Search on All Human Protein Sequences FILE NAME PROTEIN AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 P143F.sub.-- HUMAN 14-3-3 PROTEIN ETA (PROTEIN AS1) (FRAGMENT) 101-135 P143S.sub.-- HUMAN 14-3-3 PROTEIN HOMOLOG STRATIFIN 45-72 P143T.sub.-- HUMAN 14-3-3 PROTEIN THETA (14-3-3 PROTEIN T-CELL) (HS1 PROTEIN) 61-92 P143Z.sub.-- HUMAN 14-3-3 PROTEIN ZETA (PROTEIN KINASE C INHIBITOR 28-55 PROTEIN-1) (KCIP-1) P1A23.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-114 A-29 (AW-19) A*2901 ALPHA CHAIN P1A24.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 A-29 (AW-19) A*2902 ALPHA CHAIN P1B02.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 B-7 B*0702 ALPHA CHAIN P1B05.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 148-182 B-13 B*1301 ALPHA CHAIN P1B10.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-75 (B-15) B*1502 ALPHA CHAIN P1B11.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84115 BW-72 (BW-70) B*1503 ALPHA P1B12.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 76-107 B-62 B*1504 ALPHA CHAIN P1B13.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-18 B*1801 ALPHA CHAIN P1B21.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-35 B*3501 ALPHA CHAIN P1B22.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-35 B*3502 ALPHA CHAIN P1B23.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-35 B*3503 ALPHA CHAIN P1B24.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 76-107 B-35 B*3504 ALPHA CHAIN P1B25.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-35 B*3505 ALPHA CHAIN P1B26.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-35 B*3506 ALPHA CHAIN P1B27.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-35 B*3507 ALPHA CHAIN P1B28.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-35 B*3508 ALPHA CHAIN P1B29.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 88-115 B-37 B*3701 ALPHA CHAIN P1B32.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 B-39 B*3902 ALPHA CHAIN P1B33.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 60-91 BW-60 (B-40) B*4001 ALPHA CHAIN P1B34.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-40 B*4002 ALPHA CHAIN P1B35.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-40 B*4003 ALPHA CHAIN P1B36.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-40 B*4004 ALPHA CHAIN P1B38.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 BW-41 B*4101 ALPHA CHAIN P1B39.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-42 B*4201 ALPHA CHAIN P1B40.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-111 BW-44 (B-12) B*4401 ALPHA CHAIN P1B41.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-44 (B-12) B*4402 ALPHA CHAIN P1B42.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-114 BW-44 (B-12) B*4403 ALPHA CHAIN P1B43.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 BW-45 (B-12) B*4501 ALPHA CHAIN P1B44.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-46 B*4601 ALPHA CHAIN P1B45.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 88-115 BW-47 B*4701 ALPHA CHAIN P1B46.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 BW-48 B*4801 ALPHA CHAIN P1B47.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-49 (B-21) B*4901 ALPHA CHAIN P1B48.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 BW-50 (B-21) B*5001 ALPHA CHAIN P1B53.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-52 (B-5) B*5201 ALPHA CHAIN P1B55.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-54 (BW-22) B*5401 ALPHA P1B56.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-55 (BW-22) B*5501 ALPHA P1B57.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-55 (BW-22) B*5502 ALPHA P1B58.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-56 (BW-22) B*5601 ALPHA P1B59.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-56 (BW-22) B*5602 ALPHA P1C01.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 CW-1 CW*0101 ALPHA CHAIN P1C02.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 CW-1 CW*0102 ALPHA CHAIN P1C03.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 CW-2 CW*0201 ALPHA CHAIN P1C04.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 CW-2 CW*0202 ALPHA CHAIN P1C06.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 CW-3 CW*0302 ALPHA CHAIN P1C12.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 CW-8 CW*0801 ALPHA CHAIN P1C13.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 CW-8 CW*0802 ALPHA CHAIN P1C14.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 CW-8 CW*0803 ALPHA CHAIN P1C17.sub.-- HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 CW*1401 ALPHA CHAIN PRECURSOR P25A6.sub.-- HUMAN 69/71 KD (2'-5') OLIGOADENYLATE 593-620 SYNTHETASE P2AAA.sub.-- HUMAN PROTEIN PHOSPHATASE PP2A, 65 KD REGULATORY SUBUNIT, 12-49 54-81 ALPHA ISOFORM P2AAB.sub.-- HUMAN PROTEIN PHOSPHATASE PP2A, 65 KD REGULATORY SUBUNIT, 9-36 41-68 79-106 BETA ISOFORM P2ABA.sub.-- HUMAN PROTEIN PHOSPHATASE PP2A, 55 KD REGULATORY SUBUNIT, 177-218 ALPHA ISOFORM P411.sub.-- HUMAN ERYTHROID PROTEIN 4.1 (BAND 4.1, ERTHROCYTE FORM) 32-66 P412.sub.-- HUMAN NON-ERYTHROID PROTEIN 4.1 (BAND 4.1, LYMPHOID FORM) 3-30 708-735 P42.sub.-- HUMAN ERYTHROCYTE MEMBRANE PROTEIN BAND 4.2 173-200 518-545 P4F2.sub.-- HUMAN 4F2 CELL-SURFACE ANTIGEN HEAVY CHAIN (4F2HC) 281-322 (LYMPHOCYTE ACTIVATION P5H1E.sub.-- HUMAN 5-HYDROXYTRYPTAMINE 1E RECEPTOR (5-HT-1E) (SEROTONIN 311-338 RECEPTOR) P5H1F.sub.-- HUMAN 5-HYDROXYTRYPTAMINE 1F RECEPTOR (5-HT-1F) (SEROTONIN 222-253 RECEPTOR) P5H2A.sub.-- HUMAN 5-HYDROXYTRYPTAMINE 2A RECEPTOR (5-HT-2A) (SEROTONIN 22-56 RECEPTOR) P5H7.sub.-- HUMAN 5-HYDROXYTRYPTAMINE 7 RECEPTOR (5-HT-7) (5-HT-X) 72-99 (SEROTONIN RECEPTOR) PA1AC.sub.-- HUMAN ALPHA-1-ANTICHYMORTYPSIN PRECURSOR (ACT) 98-132 330-357 PA1AG.sub.-- HUMAN ALPHA-1-ACID GLYCOPROTEIN 1 PRECURSOR (OROSOMUCOID) 92-119 ((OMD) PA1AT.sub.-- HUMAN ALPHA-1-ANTITRYPSIN PRECURSOR (ALPHA-1 PROTEASE 168-202 INHIBITOR) (ALPHA-1- PA1AU.sub.-- HUMAN ALPHA-1-ANTITRYPSIN-REALATED PROTEIN PRECURSOR 163-197 PA2AP.sub.-- HUMAN ALPHA-2-ANTIPLASMIN PRECURSOR (ALPHA-2-PLASMIN 191-218 365-395 INHIBITOR) (ALPHA-2- PA2GL.sub.-- HUMAN LEUCINE-RICH ALPHA-2-GLYCOPROTEIN (LRG) 104-134 PA2MG.sub.-- HUMAN ALPHA-2-MACROGLOBULIN PRECURSOR (ALPHA-2-M) 53-80 319-349 1085-1112 1402-1429 PA4.sub.-- HUMAN ALZHIMER'S DESEASE AMYLOID A4 PROTEIN PRECURSOR 428-455 (PROTEASE NEXIN-11) PAACT.sub.-- HUMAN ALPHA-ACTININ (F-ACTIN CROSS LINKING PROTEIN) 92-119 720-747 PAATM.sub.-- HUMAN ASPARTATE AMINOTRANSFERASE, MITOCHONDRIAL 109-136 PRECURSOR (EC 2.6.1.1) PABP2.sub.-- HUMAN ENDOTHELIAL ACTIN-BINDING PROTEIN (ABP-280) 61-88 119-147 2604-2633 (NONMUSCLE FILAMIN) PAC12.sub.-- HUMAN ACTIVATOR 1 37 KD SUBUNIT (REPLICATION FACTOR C 37 306-333 KD SUBUNIT) (A1 PAC15.sub.-- HUMAN ACTIVATOR 1 140 KD SUBUNIT (REPLICATION FACTOR C 14-51 182-209 668-700 LARGE SUBUNIT) (A1 PACDL.sub.-- HUMAN ACYL-COA DEHYDROGENASE PRECURSOR, LONG-CHAIN 78-108 179-206 313-340 SPECIFIC (EC 1.3.99.13) PACET.sub.-- HUMAN ANGIOTENSIN-CONVERTING ENZYME PRECURSOR, TESTIS- 78-115 126-153 676-710 SPECIFIC (EC 3.4.15.1) PACE.sub.-- HUMAN ANGIOTENSIN-CONVERTING ENZYME PRECURSOR, SOMATIC 652-689 700-727 1250-1284 (EC 3.4.15.1) (ACE) PACHA.sub.-- HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN 48-80 PRECURSOR PACHE.sub.-- HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, EPSILON CHAIN 46-98 PRECURSOR PACHG.sub.-- HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, GAMMA CHAIN 45-79 304-331 PRECURSOR PACHP.sub.-- HUMAN NEURONAL ACETYLCHOLINE RECEPTOR PROTEIN, BETA-4 29-56 70-97 CHAIN (FRAGMENT) PACRO.sub.-- HUMAN ACROSIN PRECURSOR (EC 3.4.21.10) 112-149 PACYM.sub.-- HUMAN ACYLPHOSPHATASE, MUSCLE TYPE ISOZYME (EC 3.6.1.7) 26-53 (ACYLPHOSPHATE PADT2.sub.-- HUMAN ADP,ATP CARRIER PROTEIN, FIBROBLAST ISOFORM 162-189 (ADP/ATP TRANSLOCASE 2) PADT3.sub.-- HUMAN ADP,ATP CARRIER PROTEIN, LIVER ISOFORM T2 (ADP/ATP 163-190 TRANSLOCASE 3) PAK79.sub.-- HUMAN A-KINASE ANCHOR PROTEIN 79 (AKAP 79) (CAMP-DEPENDENT 197-238 381-414 PROTEIN KINASE PALFA.sub.-- HUMAN FRUCTOSE-BISPHOSPHATE ALDOLASE (EC 4.1.2.13) A 36-63 (MUSCLE) PALFB.sub.-- HUMAN FRUCTOSE-BISPHOSPHATE ALDOLASE (EC 4.1.2.13) B 79-113 (LIVER) PAMD1.sub.-- HUMAN AMP DEAMINASE 1 (EC 3.5.4.6) (MYOADENYLATE 59-86 DEAMINASE) (AMP DEAMINASE PAMD3.sub.-- HUMAN AMP DEAMINASE 3 (EC 3.5.4.6) (AMP DEAMINASE 49-76 ISOFORM E) PAMPN.sub.-- HUMAN AMINOPEPTIDASE N (EC 3.4.11.2) (MICROSOMAL 492-523 604-648 926-964 AMINOPEPTIDASE) (GP150) PAMPR.sub.-- HUMAN AMPHIRGEULIN PRECURSOR (AR) 213-247 PAMRP.sub.-- HUMAN ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN 173-236 263-290 PRECURSOR PANFB.sub.-- HUMAN BRAIN NATRIURETIC PEPTIDE PRECURSOR 36-63 PANK1.sub.-- HUMAN ANKYRIN R (ANKYRINS 2.1 AND 2.2) (ERYTHROCYTE 812-839 1004-1031 1617-1644 ANKYRIN) PANKB.sub.-- HUMAN ANKYRIN, BRAIN VARIANT 1 (ANKYRIN B) (ANKYRIN, 1544-1571 NONERYTHROID) PANKC.sub.-- HUMAN ANKYRIN, BRAIN VARIANT 2 (ANKYRIN B) (ANKYRIN, 1811-1838 NONERYTHROID) PANPA.sub.-- HUMAN ATRIAL NATRIURETIC PEPTIDE RECEPTOR A PRECURSOR 553-580 825-852 (ANP-A) (ANPRA) (GC-A) PANPB.sub.-- HUMAN ATRIAL NATRIURETIC PEPTIDE RECEPTOR B PRECURSOR 810-837 (ANP-B) (ANPRA) (GC-B) PANT3.sub.-- HUMAN ANTITHROMBIN-III PRECURSOR (ATIII) 162-196 PANX2.sub.-- HUMAN ANNEXIN II (LIPOCORTIN II) (CALPACTIN I HEAVY 40-67 306-333 CHAIN) (CHROMOBINDIN 8) PANX3.sub.-- HUMAN ANNEXIN III (LIPOCORTIN III) (PLACENTAL 215-242 ANTICOAGULANT PROTEIN III) PANX6.sub.-- HUMAN ANNEXIN VI (LIPOCORTIN VI) (P68) (P70) (PROTEIN 60-87 626-653 III) (CHROMOBINDIN 20) PANXI.sub.-- HUMAN ANNEXIN, INTESTIN-SPECIFIC (ISA) 37-78 137-164 PAOFA.sub.-- HUMAN AMINE OXIDASE (FLAVIN-CONTAINING) A (EC 1.4.3.4) 16-43 74--104 (MONOAMINE OXIDASE) PAOFB.sub.-- HUMAN AMINE OXIDASE (FLAVIN-CONTAINING) B (EC 1.4.3.4) 68-95 74--104 (MONOAMINE OXIDASE) PAPA1.sub.-- HUMAN APOLIPOPROTEIN A-I PRECURSOR (APO-AI) 57-84 PAPB.sub.-- HUMAN APOLIPOPROTEIN B-100 PRECURSOR (APO B-100/APO B-48) 1073-1100 1353-1380 1524-1584 2074-2113 2132-2159 2181-2215 2240-2271 2360-2389 2466-2507 2529-2559 2850-3000 3360-3390 3480-3570 3620-3654 4040-4074 4090-4120 4135-4167 4247-4301 4397-4438 4465-4492 4499-4544 PAPC2.sub.-- HUMAN APOLIPOPROTEIN C-II PRECURSOR (APO-CII) 36-63 PAPC.sub.-- HUMAN ADENOMATOUS POLYPOSIS COLI PROTEIN (APC PROTEIN) 145-172 617-651 834-861 1795-1822 2172-2212 2572-2609 PAPE.sub.-- HUMAN APOLIPOPROTEIN E PRECURSOR (APO-E) 48-81 PAPOA.sub.-- HUMAN APOLIPOPROTEIN (A) PRECURSOR (EC 3.4.21.-) 4448-4475 (APO (A)) (LP (A) ) PAQP1.sub.-- HUMAN AQUAPORIN-CHIP (WATER CHANNEL PROTEIN FOR RED BLOOD 39-73 CELLS AND KIDNEY PARK1.sub.-- HUMAN BETA-ADRENERGIC RECEPTOR KINASE 1 (EC 2.7.1.126) 523-553 (BETA-ARK-1) PARLY.sub.-- HUMAN ARGININOSUCCINATE LYASE (EC 4.3.2.1) 69-103 (ARGINOSUCCINASE) PARNT.sub.-- HUMAN ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR 223-250 (ARNT PROTEIN) (DIO PARRC.sub.-- HUMAN BETA-ARRESTIN 2 215-242 305-332 PARRS.sub.-- HUMAN ARRESTIN (RETINAL S-ANTIGEN) (48 KD PROTEIN) (S-AG) 299-352 PARY1.sub.-- HUMAN ARYLAMINE N-ACETYL TRANSFERASE, MONOMORPHIC 7-34 (EC 2.3.1.5) (MNAT) PARY2.sub.-- HUMAN ARYLAMINE N-ACETYLTRANSFERASE, POLYMORPHIC 7-34 (EC 2.3.1.5) (PNAT) PASNS.sub.-- HUMAN ASPARAGINE SYNTHETASE (GLUTAMINE-HYDROLYZING) 311-338 347-374 (EC 6.3.5.4) (TS11 CELL PATCD.sub.-- HUMAN CALCIUM-TRANSPORTING ATPASE SARCOPLASMIC RETICULUM 163-190 TYPE (EC 3.6.1.38) PATCE.sub.-- HUMAN CALCIUM-TRANSPORTING ATPASE ENDOPLASMIC RETICULUM 163-190 TYPE (EC 3.6.1.38) PATF1.sub.-- HUMAN TRANSCRIPTION FACTOR ATF-1 (FRAGMENT) 203-230 PATF3.sub.-- HUMAN TRANSCRIPTION FACTOR ATF-3 (FRAGMENT) 155-183 PATF5.sub.-- HUMAN TRANSCRIPTION FACTOR ATF-5 (FRAGMENT) 30-61 PATF6.sub.-- HUMAN TRANSCRIPTION FACTOR ATF-6 (FRAGMENT) 34-68 PATFA.sub.-- HUMAN TRANSCRIPTION FACTOR ATF-A AND AFTA-DELTA 351-394 PATPF.sub.-- HUMAN ATP SYNTHASE B CHAIN, MITOCHONDRIAL PRECURSOR 129-163 (EC 3.6.1.34) PB232.sub.-- HUMAN NUCLEOLAR PHOSPHOPROTEIN B23 (NUCLEOPHOSMIN) 114-141 (NUMATRIN) PB2AR.sub.-- HUMAN BETA-2-ADRENERGIC RECEPTOR 292-319 345-372 PB3A2.sub.-- HUMAN ANION EXCHANGE PROTEIN 2 (NON-ERYTHROID BAND 1081-1111 3-LIKE PROTEIN) (BND3L) PB94.sub.-- HUMAN B94 PROTEIN 115-142 525-562 609-636 PBAN7.sub.-- HUMAN ERYTHROCYTE BAND 7 INTEGRAL MEMBRANE PROTEIN 106-140 PBASO.sub.-- HUMAN BASONUCLIN 120-147 310-337 773-807 PBC2B.sub.-- HUMAN TRANSFORMING PROTEIN BCL-2-BETA 178-205 PBCGF.sub.-- HUMAN B-CELL GROWTH FACTOR PRECURSOR (BCGF-12 KD) 33-63 PBCR.sub.-- HUMAN BREAKPOINT CLUSTER REGION PROTEIN 784-825 PBGLR.sub.-- HUMAN BETA-BLUCURONIDASE PRECURSOR (EC 3.2.1.31) 246-280 504-531 PBMP2.sub.-- HUMAN BONE MORPHOGENETIC PROTEIN 2 PRECURSOR (BMP-2) 216-250 (BMP-2A) PBMP5.sub.-- HUMAN BONE MORPHOGENETIC PROTEIN 5 PRECURSOR (BMP-5) 202-229 PBMP6.sub.-- HUMAN BONE MORPHOGENETIC PROTEIN 6 PRECURSOR (BMP-6) 274-301 BPMP7.sub.-- HUMAN BONE MORPHOGENETIC PROTEIN 7 PRECURSOR (BMP-7) 192-219 (OSTEOENIC PROTEIN 1) PBN51.sub.-- HUMAN BN51 PROTEIN 284-311 PBPI.sub.-- HUMAN BACTERICIDAL PERMEABILITY INCREASING PROTEIN 168-195 PRECURSOR (BPI) (CAP 57) PBRS3.sub.-- HUMAN BOMBESIN RECEPTOR SUBTYPE-3 (BRS-3) 10-37 BPTF2.sub.-- HUMAN BASIC TRANSCRIPTION FACTOR 62 KD SUBUNIT (P62) 128-162 353-385 PBTG1.sub.-- HUMAN BTG1 PROTEIN (B-CELL TRANSLOCATION GENE 1 PROTEIN) 26-53 PC1TC.sub.-- HUMAN C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC 330-363 (METHYLENETETRAYDROFO PC2TA.sub.-- HUMAN MHC CLASS II TRANSACTIVATOR CIITA 921-948 PCA19.sub.-- HUMAN COLLAGEN ALPHA 1 (IX) CHAIN PRECURSOR 120-150 PCA1B.sub.-- HUMAN COLLAGEN ALPHA 1 (IX) CHAIN PRECURSOR 341-368 PCABV.sub.-- HUMAN CALBINDIN (VITAMIN D-DEPENDENT CALCIUM-BINDING 27-54 PROTEIN (CABP), AVIAN- PCAD5.sub.-- HUMAN CADHERIN 5 PRECURSOR (7B4 ANTIGEN) 723-750 PCADE.sub.-- HUMAN ETITHELIAL-CADHERIN PRECURSOR (E-CADHERIN) 838-865 (UVOMORULIN) (CAM 120/80) PCADN.sub.-- HUMAN NEURAL-CADHERIN PRECURSOR (N-CADHERIN) 95-122 323-350 PCADP.sub.-- HUMAN PLACENTAL-CADHERIN PRECURSOR (P-CADHERIN) 384-411 580-607 PCAGA.sub.-- HUMAN CALGRANULIN A (MIGRATION INHBITORY FACTOR-RELATED 2-29 PROTEIN 8) (MRP-8) PCALR.sub.-- HUMAN CALCITONIN RECEPTOR PRECURSOR (CT-R) 140-167 PCAMA.sub.-- HUMAN CARTLIAGE MATRIX PROTEIN PRECURSOR 297-324 467-494 PCAP1.sub.-- HUMAN CALPAIN 1, LARGE (CATALYTIC) SUBUNIT (EC 3.4.22.17) 561-588 (CALCIUM-ACTIVATED PCAP2.sub.-- HUMAN CALPAIN 2, LARGE (CATALYTIC) SUBUNIT (EC 3.4.22.17) 257-284 502-529 (CALCIUM-ACTIVATED PCAP3.sub.-- HUMAN CALPAIN P94, LARGE (CATALYTIC) SUBUNIT (EC 3.4.22.17) 674-701 (CALCIUM- PCAPL.sub.-- HUMAN PLACENTAL CALCIUM-BINDING PROTEIN 13-40 PCAP.sub.-- HUMAN ADENYLYL CYCLASE-ASSOCIATED PROTEIN (CAP) 111-138 163-197 321-355 PCART.sub.-- HUMAN CALRETININ (29 KD CALBINDIN) 217-244 PCASB.sub.-- HUMAN BETA CASIN PRECURSOR 14-48 PCATA.sub.-- HUMAN CATALASE (EC 1.11.1.6) 422-456 PCATD.sub.-- HUMAN CATHEPSIN D PRECURSOR (EC 3.4.23.5) 253-282 PCATH.sub.-- HUMAN CATHEPSIN H PRECURSOR (EC 3.4.22.16) 41-68 PCATL.sub.-- HUMAN CATHEPSIN L PRECURSOR (EC 3.4.22.15) (MAJOR 278-305 EXCRETED PROTEIN) (MEP) PCATS.sub.-- HUMAN CATHEPSIN S PRECURSOR (EC 3.4.22.27) 30-57 142-169 PCBFB.sub.-- HUMAN CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT B (CBF-B) 24-58 138-165 (NF-Y PROTEIN PCBG.sub.-- HUMAN CORTICOSTEROID-BINDING GLOBINULIN PRECURSOR (CBG) 88-122 (TRANSCORTIN) PCBPB.sub.-- HUMAN CARBOXYPEPTIDASE B PRECURSOR (EC 3.4.17.2) 69-129 278-305 319-346 (PARCREAS-SPECIFIC PROTEIN) PCBPH.sub.-- HUMAN CARBOXYPEPTIDASE H PRECURSOR (EC 3.4.17.10) 355-382 (CARBOXYPEPTIDASE E) (CPE) PCC21.sub.-- HUMAN CDC21 HOMOLOG (P1-CDC21) (FRAGMENT) 35-62 PCC27.sub.-- HUMAN PROTEIN CDC27HS 209-240 PCCG1.sub.-- HUMAN TRANSCRIPTION INITIATION FACTOR TFIID 250 KD 1298-1342 SUBUNIT (TBP-ASSOCIATED PCE14.sub.-- HUMAN MONOCYTE DIFFERENTIATION ANTIGEN CD14 PRECURSOR 142-169 (MYELOID CELL-SPECIFI PCD1A.sub.-- HUMAN T-CELL SURFACE CLYCOPROTEIN CDIA PRECURSOR (CDIA 32-63 281-308 ANTIGEN) (T-CELL PCD1E.sub.-- HUMAN T-CELL SURFACE CLYCOPROTEIN CDIE PRECURSOR (CDIE 71-104 ANTIGEN) (R2G1) PCD20.sub.-- HUMAN B-LYMPHOCYTE ANTIGEN CD20 (B-LYMPHOCYTE SURFACE 226-255 ANTIGEN B1) (LEU-16) PCD24.sub.-- HUMAN CD20 RECEPTOR PRECURSOR 226-255 PCD2.sub.-- HUMAN T-CELL SURFACE ANTIGEN CD2 PRECURSOR (T-CELL SURFACE 88-19 ANTIGEN PCD34.sub.-- HUMAN HEMOPOIETIC PROGENITOR CELL ANTIGEN CD34 PRECURSOR 74-108 PCD37.sub.-- HUMAN LEUKOCYTE ANTIEN CD37 101-128 PCD3G.sub.-- HUMAN T-CELL SURFACE GLYCOPROTEIN CD3 GAMMA CHAIN 7-34 PRECURSOR (T-CELL RECEPT PCD3L.sub.-- HUMAN CD30 LIGAND (CD30-L) 96-130 183-217 PCD4X.sub.-- HUMAN CD44 ANTIGEN, EPITHELIAL FORM PRECURSOR (CD44E) 328-355 (PHAGOCYTIC PCD4.sub.-- HUMAN T-CELL SURFACE GLYCOPROTEIN CD4 PRECURSOR (T-CELL 44-71 240-267 SURFACE ANTIGEN PCD53.sub.-- HUMAN LEUKOCYTE SURFACE ANTIGEN CD53 87-114 PCD72.sub.-- HUMAN B-CELL DIFFERENTIATION ANTIGEN CD72 (LYB-2) 118-177 PCDK3.sub.-- HUMAN CELL DIVISION PROTEIN KINASE 3 (EC 2.7.1.-) 5--32 PCDK5.sub.-- HUMAN CELL DIVISION PROTEIN KINASE 5 (EC 2.7.1.-) (KINASE 5--32 PSSALRE) PCEBB.sub.-- HUMAN CCAA/ENHANCER BINDING PROTEIN BETA (C/EBP BETA) 296-330 (NUCLEAR FACTOR PCENB.sub.-- HUMAN MAJOR CENTROMERE AUTOANTIGEN B (CENTROMERE 568-595 PROTEIN B) (CENP-B) PCENC.sub.-- HUMAN CENTROMERE PROTEIN C (CENP-C) (CENTROMERE 433-460 AUTOANTIGEN C) PCENE.sub.-- HUMAN CENTROMERIC PROTEIN E (CENP-E PROTEIN) 372-399 493-520 553-607 715-752 767-825 850-884 903-947 963-995 1080-1107 1122-1149 1179-1239 1250-1277 1340-1367 1440-1481 1486-1556 1646-1680 1684-1724 1808-1846 1852-1883 1890-1917 1940-1988 2021-2048 2288-2318 2440-2478 2498-2563 PCERU.sub.-- HUMAN CERULOPLASMIN PRECURSOR (EC 1.16.3.1) (FERROXIDASE) 913-940 PCETP.sub.-- HUMAN CHOLESTERYL ESTER TRANSFER PROTEIN PRECURSOR 71-108 PCFTR.sub.-- HUMAN CYSTIC FIBROSIS TRNASMEMBRANE CONDUCTANCE 158-189 803-922 1243-1270 REGULATOR (CFTR) PCGCC.sub.-- HUMAN CGMP-GATED CATION CHANNEL PROTEIN (CYCLIC NUCLEOTIDE 216-243 PCGL.sub.-- HUMAN CYSTATHIONINE GAMMA-LYASE (EC 4.4.1.1) 315-349 PCHLR.sub.-- HUMAN CHLORDECONE REDUCTASE (EC 1.1.1.225) (CDR) 17-51 PCHOL.sub.-- HUMAN CHOROIDERAEMIA-LIKE PROTEIN 56-97 230-257 451-478 PCHOR.sub.-- HUMAN CHOROIDERAMIA PROTEIN (TCD PROTEIN) 112-139 PCINA.sub.-- HUMAN SODIUM CHANNEL PROTEIN, CARDIAC AND SKELETAL MUSCLE 787-814 943-970 ALPHA-SUBUNIT PCLCA.sub.-- HUMAN CLATHRIN LIGHT CHAIN A (BRAIN AND LYMPHOCYTE LCA) 121-148 PCLCB.sub.-- HUMAN CLATHRIN LIGHT CHAIN B (BRAIN AND LYMPHOCYTE LCB) 123-157 PCLCY.sub.-- HUMAN CALCYCLIN (PROLACTIN RECEPTOR ASSOCIATED PROTEIN) 9-50 (PRA) (GROWTH PCLUS.sub.-- HUMAN CLUSTERIN PRECURSOR (COMPLEMENT-ASSOCIATED PROTINE 36-98 323-350 367-394 SP-40,40) PCMGA.sub.-- HUMAN CHROMOGRANIN A PRECURSOR (CGA) (CONTAINS: 93-120 430-457 PANCREASTATIN AND WE-14) PCNTF.sub.-- HUMAN CILIARY NEUROTROPHIC FACTOR (CNTF) 66-93 PCO02.sub.-- HUMAN TUMOR-ASSOCIATED ANTIGEN CO-029 29-56 95-148 PCO3.sub.-- HUMAN COMPLEMENT C3 PRECURSOR 242-276 593-620 837-867 PCO4.sub.-- HUMAN COMPLEMENT C4 PRECURSOR 1292-1319 PCO5.sub.-- HUMAN COMPLEMENT C5 PRECURSOR 298-342 537-564 970-997 1270-1304 PCO6.sub.-- HUMAN COMPLEMENT C6 PRECURSOR 367-398 PCO7.sub.-- HUMAN COMPLEMENT C7 PRECURSOR 225-261 PCOXI.sub.-- HUMAN CYTOCHROME C OXIDASE POLYPEPTIDE I (EC 1.9.3.1) 353-380 PCP70.sub.-- HUMAN CYTOCHROME P450 VII (CHOLESTEROL 7-ALPHA- 263-290 346-373 MONOOXYGENASE) PCPCH.sub.-- HUMAN CYTOCHROME P450 IIC17 (EC 1.14.14.1) (P450-254C) 109-136 (FRAGMENT) PCPE1.sub.-- HUMAN CYTOCHROME P450 IIE1 (EC 1.14.14.1) (P450-J) 231-258 (ETHANOL INDUCIBLE) PCPSM.sub.-- HUMAN CARBAMOYL-PHOSPHATE SYNTHASE (AMMONIA) 112-146 420-447 MITOCHONDRIAL PRECURSOR PCPT2.sub.-- HUMAN MITOCHONDRIAL CARNITINE PALMITOYLTRANSFERASE II 410-437 PRECURSOR PCPT7.sub.-- HUMAN CYTOCHROME P450 XVIIA1 (P450-C17) (EC 1.14.99.9) 226-257 (STERIOD 17-ALPHA- PCPV1.sub.-- HUMAN CYTOCHROME P450 XIXA1 (AROMATASE) (EC 1.14.14.1) 234-271 (ESTROGEN PCR2.sub.-- HUMAN COMPLEMENT RECEPTOR TYPE 2 PRECURSOR (CR2) 986-1013 (COMPLEMENT C3D RECEPTOR) PCRCM.sub.-- HUMAN COLORECTAL MUTANT CANCER PROTEIN (MCC PROTEIN) 68-126 379-420 633-678 724-754 763-790 PCREB.sub.-- HUMAN CAMP RESPONSE ELEMENT BINDING PROTEINS A AND B 94-125 (CREB-1 AND CREB-B) PCREP.sub.-- HUMAN CAMP RESPONSE ELEMENT BINDING PROTEIN CRE-BP1 380-414 PCRP.sub.-- HUMAN C-REACTIVE PROTEIN PRECURSOR 60-87 150-177 PCS1.sub.-- HUMAN CLEAVAGE SIGNAL-1 PROTEIN (CS-1) 203-233 PCSF1.sub.-- HUMAN MICROPHAGE COLONY STIMULATING FACTOR-1 PRECURSOR 143-170 (CSF-1) (MCSF) PCST3.sub.-- HUMAN CLEAVAGE STIMULATION FACTOR, 50 KD SUBUNIT (CSTF 50 6-33 KD SUBUNIT) (CF-1 PCTNA.sub.-- HUMAN ALPHA-CATENIN (CADHERIN-ASSOCIATED PROTEIN) 681-718 PCTNR.sub.-- HUMAN ALPHA-CATENIN RELATED PROTEIN (CATENIN ALPHA-2) 680-717 PCX26.sub.-- HUMAN GAP JUNCTION BETA-2 PROTEIN (CONNEXIN 26) (CX26) 108-139 PCS32.sub.-- HUMAN GAP JUNCTION BETA-1 PROTEIN (CONNEXIN 32) (CX32) 117-144 (GAP JUNCTION 28 KD PCX37.sub.-- HUMAN GAP JUNCTION ALPHA-4 PROTEIN (CONNEXIN 37) (CX37) 88-115 PCYB5.sub.-- HUMAN CYTOCHROME B5 3-42 PCYG1.sub.-- HUMAN GUANYLATE CYCLASE SOLUBLE, BETA-1 CHAIN (EC 4.6.1.2) 80-107 126-153 352-396 (70 KD CHAIN) PCYG4.sub.-- HUMAN GUANYLATE CYCLASE SOLUBLE, ALPHA-4 CHAIN (EC 4.6.1.2) 106-133 PCYGR.sub.-- HUMAN RETINAL GUANYLYL CYCLASE PRECURSOR (EC 4.6.1.2) 824-851 PCYRG.sub.-- HUMAN CYTOKINE RECEPTOR COMMON GAMMA CHAIN PRECURSOR 293-320 (GAMMA-C) PCYTA.sub.-- HUMAN CYSTATIN A (STEFIN A) (CYSTATIN AS) 27-58 PDBL.sub.-- HUMAN PROTO-ONCOGENE DBL PRECURSOR (CONTAINS: MCF2) 233-283 485-524 766-793 801-845 PDESM.sub.-- HUMAN DESMIN 153-180 272-312 PDESP.sub.-- HUMAN DESMOPLAKIN I AND II (DPI AND DPII) (FRAGMENT) 31-79 113-143 217-244 269-317 382-434 437-467 528-558 563-598 630-674 697-734 738-789 1456-1493 1508-1535 PDHAP.sub.-- HUMAN ALDEHYDE DEHYDROGENASE, DIMERIC NADP-PREFERRING 31-58 (EC 1.2.1.5) PDMD.sub.-- HUMAN DYSTROPHIN 86-116 338-365 484-511 753-780 976-1003 1012-1228 1364-1394 1615-1674 1838-1865 2158-2185 2313-2343 2752-2779 2786-2830 2912-2958 3014-3041 3499-3533 PDNJI.sub.-- HUMAN DNAJ PROTEIN HOMOLOG 45-76 PDNLI.sub.-- HUMAN DNA LIGASE I (EC 6.5.1.1) (POLYDEOXYRIBONUCLEOTIDE 130-157 355-392 732-759 SYNTHASE (ATP) PDPOA.sub.-- HUMAN DNA POLYMERASE ALPHA (EC 2.7.7.7) 25-74 1009-1057 1100-1127 PDPOD.sub.-- HUMAN DNA POLYMERASE DELTA CATALYTIC CHAIN (EC 2.7.7.7) 729-756 PDPP4.sub.-- HUMAN DIPDPTIDYL PEPTIDASE IV (EC 3.4.14.5) (DPP IV) 29-77 114-148 (T-CELL ACTIVATION PDRN1.sub.-- HUMAN DEOXYRIBONCULEASE I PRECURSOR (EC 3.1.21.1) 44-71 (DNASE I) PDSC2.sub.-- HUMAN DESMOCOLLIN 3A/3B PRECURSOR (DESMOSOMAL 80 107 355-398 GLYCOPROTEIN II AND III) PDSG1.sub.-- HUMAN DESMOGLEIN 1 PRECURSOR (DESMOSOMAL GLYCOPROTEIN 1) 15-42 271-298 497-531 (DG1) PDSG3.sub.-- HUMAN DEXMOGLEIN 3 PRECURSOR (130 KD PEMPHIGUS VULGARIS 211-248 325-352 ANTIGEN) (PVA) PDUG.sub.-- HUMAN DIVERENT UPSTREAM PROTEIN (DUP) 584-618 PEAR1.sub.-- HUMAN V-ERBA RELATED PROTEIN EAR-1 523-550 PEB12.sub.-- HUMAN EBV-INDUCED G PROTEIN-COUPLED RECEPTOR 2 (EBI2) 44-78 PEF1B.sub.-- HUMAN ELONGATION FACTOR 1-BETA (EF-1-BETA) 105-132 PEF1D.sub.-- HUMAN ELONGATION FACTOR 1-DELTA (EF-1-DELTA) 84-118 PEGFR.sub.-- HUMAN EPIDERMAL GROWTH FACTOR RECEPTOR PRECURSOR 64-91 440-467 (EC 2.7.1.112) PEGF.sub.-- HUMAN EPIDERMAL GROWTH FACTOR PRECURSOR, KIDNEY (EGF) 47-74 (UROGASTRONE) PELF1.sub.-- HUMAN ETS-RELATED TRANSCRIPTION FACTOR ELF-1 551-588 PENPL.sub.-- HUMAN ENDOPLASMIN PRECURSOR (94 KD GLUCOSE-REGULATED 47-74 246-273 PROTEIN) (GRP94) (GP96 PENV1.sub.-- HUMAN RETORVIRUS-RELATED ENV POLYPROTEIN 382-420 PEPC.sub.-- HUMAN IG EPSILON CHAIN C REGION 161-188 PEPMO.sub.-- HUMAN EPIMORPHIN 35-62 67-94 249-283 PER72.sub.-- HUMAN PROTEIN DISULFIDE ISOMERASE-RELATED PRECURSOR 58-85 142-169 458-485 (ERP72) PERC1.sub.-- HUMAN DNA EXCISION REPAIR PROTEIN ERCC-1 240-270 PERC6.sub.-- HUMAN EXCISION REPAIR PROTEIN ERCC-6 160-209 939-973 PERTR.sub.-- HUMAN ESTROGEN RECEPTOR (ER) 451-488 PET2.sub.-- HUMAN ENDOTHELIN-2 PRECURSOR (ET-2) 133-160 PET3.sub.-- HUMAN ENDOTHELIN-3 PRECURSOR (ET-3) 182-209 PEV2A.sub.-- HUMAN EVI2A PROTEIN PRECURSOR 29-56 PEZRI.sub.-- HUMAN EZRIN (P81) (CYTOVILLIN) (VILLIN-2) 119-146 351-392 402-429 512-539 PFA5.sub.-- HUMAN COAGULATION FACTOR V PRECURSOR 2103-2137 PFA8.sub.-- HUMAN COAGULATION FACTOR VIII PRECURSOR (PROCOAGULANT 871-908 1007-1034 1194-1230 COMPONENT) PFA9.sub.-- HUMAN COAGULATION FACTOR IX PRECURSOR (EC 3.4.21.22) 271-298 (CHRISTMAS FACTOR) PFABI.sub.-- HUMAN FATTY ACID-BINDING PROTEIN, INTESTINAL 98-125 PFASA.sub.-- HUMAN APOPTOSIS-MEDIATING SURFACE ANTIGEN FAS PRECURSOR 23-50 249-301 306-333 (APO-1 ANTIGEN) PFCE2.sub.-- HUMAN LOW AFFINITY IMMUNOGLOBULIN EPSILON FC RECEPTOR 81 115 (LYMPHOCYTE IGE PFCEA.sub.-- HUMAN HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA 140-174 SUBUNIT (FCERI) PFIBA.sub.-- HUMAN FIBRINOGEN ALPHA CHAIN PRECURSOR 131-165 427-457 PFIBB.sub.-- HUMAN FIBRINOGEN BETA CHAIN PRECURSOR 149-186 PFIBG.sub.-- HUMAN FIBRINOGEN GAMMA-A CHAIN PRECURSOR 59-93 125-160 PFIBH.sub.-- HUMAN FIBRINOGEN GAMMA-G CHAIN (FIBRINOGEN GAMMA') 59-93 125-160 PFINC.sub.-- HUMAN FIBRONECTIN PRECURSOR 2168-2199 PFLI1.sub.-- HUMAN FLI-1 ONCOGENE (ERGB TRANSCRIPTION FACTOR) 172-209 PFMO3.sub.-- HUMAN DIMETHYLANILINE MONOOXYGENASE (N-OXIDE FORMING) 3 184-218 256-283 301-328 (EC 1.14.13.8) PFOS.sub.-- HUMAN P55-FOS PROTO-ONCOGENE PROTEIN 162-193 PFRA1.sub.-- HUMAN FOS-RELATED ANTIGEN 1 133-168 PFRA2.sub.-- HUMAN FOS-RELATED ANTIGEN 2 149-180 PFRIH.sub.-- HUMAN FERRITIN HEAVY CHAIN 7-34 PFRIL.sub.-- HUMAN FERRITIN LIGHT CHAIN 3-33 PFSHR.sub.-- HUMAN FOLLICLE STIMULATING HORMONE RECEPTOR PRECURSOR 364-395 (FSH-R) PFUCO.sub.-- HUMAN TISSUE ALPHA-L-FUCOSIDASE PRECURSOR (EC 3.2.1.51) 308-335 (ALPHA-L-FUCOSIDASE PFUMH.sub.-- HUMAN FUMARATE HYDRATASE, MITOCHONDRIAL (EC 4.2.1.2) 424-451 (FUMARASE) PG0S2.sub.-- HUMAN PUTATIVE LYMPHOCYTE G0/G1 SWITCH PROTEIN 56-83 PG19P.sub.-- HUMAN PROTEIN KINASE C SUBSTRATE, 80 KD PROTEIN, HEAVY 146-173 CHAIN (PKCSH) PG6PI.sub.-- HUMAN GLUCOSE-6-PHOSPHATE ISOMERASE (GPI) (EC 5.3.1.9) 16-50 (PHOSPHOGLUCOSE PG732.sub.-- HUMAN MAJOR GASTROINTESTINAL TUMOR-ASSOCIATED PROTEIN GA733-2 PRECURSOR PGA12.sub.-- HUMAN GALACTOKINASE 2 (EC 2.7.1.6) 254-281 PGAA1.sub.-- HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-1 SUBUNIT 210-237 PRECURSOR (GABA(A) PGAA3.sub.-- HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-3 SUBUNIT 211-255 PRECURSOR (GABA(A) PGASR.sub.-- HUMAN GASTRIN/CHOLECYSTOKININ TYPE B RECEPTOR (CCK-B 75-105 RECEPTOR) PGB01.sub.-- HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(O), ALPHA 22-49 SUBUNIT 1 PGB02.sub.-- HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(O), ALPHA 22-49 SUBUNIT 2 PGBAK.sub.-- HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(K), ALPHA 22-49 SUBUNIT (G(I) ALPHA-3) PGBAS.sub.-- HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(S), ALPHA 7-34 SUBUNIT (ADENYLATE PGBAY.sub.-- HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(Y), ALPHA 95-122 SUBUNIT (ALPHA-11) PGBB3.sub.-- HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) 65-92 BETA SUBUNIT 3 PGBLP.sub.-- HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN BETA 110-137 255-282 289-316 SUBUNIT-LIKE PROTEIN 12.3 PGBP2.sub.-- HUMAN INTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 2 454-488 (GUANINE NUCLEOTIDE- PGBT2.sub.-- HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(T), ALPHA-2 22-49 SUBUNIT (TRANSDUCIN PGCF.sub.-- HUMAN GC-RICH SEQUENCE DNA-BINDING FACTOR (GCF) 200-227 293-320 367-394 396-423 647-674 (TRANSCRIPTION FACTOR 9) PGCH1.sub.-- HUMAN GTP CYCLOHYDROLASE I (EC 3.5.4.16) 165-192 PGCRA.sub.-- HUMAN GLUCOCORTICOID RECEPTOR, ALPHA (GR) 167-194 PGCRB.sub.-- HUMAN GLUCOCORTICOID RECEPTOR, BETA (GR) 167-194 PGCSP.sub.-- HUMAN GLYCINE DEHYDROGENASE (DECARBOXYLATING) PRECURSOR 460-487 (EC 1.4.4.2) PGDN.sub.-- HUMAN GLIA DERIVED NEXIN (GDN) (PROTEASE NEXTIN I) 83-110 PGELS.sub.-- HUMAN GELSOLIN PRECURSOR, PLASMA (ACTIN-DEPOLYMERIZING 701-728 FACTOR) (ADF) PGFAP.sub.-- HUMAN GLIAL FIBRILLARY ACIDIC PROTEIN, ASTROCYTE 189-216 349-376 384-411 PGL6S.sub.-- HUMAN N-ACETYLGLUCOSAMINE-6-SULFATASE PRECURSOR 170-211 (EC 3.1.6.14) (G6S) PGLPK.sub.-- HUMAN LYCEROL KINASE (EC 2.7.1.30) (APT: GLYCEROL 78-112 251-278 3-PHOSPHOTRANSFERASE) PGLY1.sub.-- HUMAN SERINE HYDROXYMETHYLTRANSFERASE, CYTOSOLIC 32-59 344--371 (EC 2.1.2.1) (SERINE PGLY2.sub.-- HUMAN SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL 417-444 (EC 2.1.2.1) (SERINE PGR78.sub.-- HUMAN 78 KD GLUCOSE REGULATED PROTEIN PRECURSOR (GRP 78) 564-591 598-625 (IMMUNOGLOBULIN PGRA2.sub.-- HUMAN GLYCINE RECEPTOR ALPHA-2 CHAIN PRECURSOR 142-169 341-368 PGRAV.sub.-- HUMAN GRAVIN (FRAGMENT) 9-43 61-88 PGRFR.sub.-- HUMAN GROWTH HORMONE-RELEASING HORMONE RECEPTOR 128-155 PRECURSOR (GHRH RECEPT PGTH2.sub.-- HUMAN GLUTATHIONE S-TRANSFERASE HA SUBUNIT 2 64-91 (EC 2.5.1.18) (GTH2) (CLASS- PGTPA.sub.-- HUMAN GTPASE-ACTIVATING PROTEIN (GAP) (RAS P21 PROTEIN 474-501 1012-1047 ACTIVATOR) PGTR1.sub.-- HUMAN GLUCOSE TRANSPORTER TYPE 1, ERYTHROCYTE/BRAIN 274-301 PGTR3.sub.-- HUMAN GLUCOSE TRANSPORTER TYPE 3, BRAIN 272-299 PGTR4.sub.-- HUMAN GLUCOSE TRANSPORTER TYPE 4, INSULIN-RESPONSIVE 290-317 PH10.sub.-- HUMAN ISTONE H1' 44-89 PH1A.sub.-- HUMAN HISTONE H1A (H1.1) 73-104 PH1B.sub.-- HUMAN HISTONE H1B (H1.4) 70-101 PH1C.sub.-- HUMAN HISTONE H1C (H1.3) 71-102 PH1D.sub.-- HUMAN HISTONE H1D (H1.2) 70-101 PH1T.sub.-- HUMAN HISTONE H1T 74-105 PH2B0.sub.-- HUMAN HISTONE H2B.1 20-47 PH2B2.sub.-- HUMAN HISTONE H2B.2 20-47 PH2B.sub.-- HUMAN HISTONE H2B (H2B.1 A) 20-47 PHA25.sub.-- HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ(5) 142-169 ALPHA CHAIN PRECURSOR PHA2K.sub.-- HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-W53 56-83 BETA CHAIN PRECURSOR PHA2P.sub.-- HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DP(W4) 50-77 BETA CHAIN PRECURSOR PHA2Q.sub.-- HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DP(W2) 50-77 BETA CHAIN PRECURSOR PHA2S.sub.-- HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, SB BETA 16-43 CHAIN PRECURSOR PHBG1.sub.-- HUMAN HEPARIN-BINDING GROWTH FACTOR PRECURSOR 1 (HBGF-1) 102-129 (ACIDIC FIBROBLAST PHBG3.sub.-- HUMAN INT-2 PROTO-ONCOGENE PROTEIN PRECURSOR (HBGF-3) 61-91 PHBG6.sub.-- HUMAN FIBROBLAST GROWTH FACTOR-6 PRECURSOR (FGF-6) 41-75 159-186 (HBGF-6) (HST-2) PHBI.sub.-- HUMAN P59 PROTEIN (HSP BINDING IMMUNOPHILIN) (HBI) 264-312 (POSSIBLE PEPTIDYL-PROLYL PHEM4.sub.-- HUMAN UROPORPHYRINOGEN-III SYNTHASE (EC 4.2.1.75) 74-118 (UROPORPHYRINOGEN-III PHEP2.sub.-- HUMAN HEPARIN COFACTOR II PRECURSOR (HC-II) (PROTEASE 169-196 INHIBITOR LEUSERPIN 2) PHEPS.sub.-- HUMAN SERIN PROTEASE HEPSIN (EC 3.4.21.-) 22-49 PHEXA.sub.-- HUMAN BETA-HEXOSAMINIDASE ALPHA CHAIN PRECUROSR 356-383 (EC 3.2.1.52) (N-ACETYL- PHEXB.sub.-- HUMAN BETA-HEXOSAMINIDASE BETA CHAIN PRECUROSR 388-415 (EC 3.2.1.52) (N-ACETYL-BETA PHMX1.sub.-- HUMAN HOMEOBOX PROTEIN MSX-1 (HOX-7) 178-212 PHNFA.sub.-- HUMAN HEPATOCYTE NUCLEAR FACTOR 1-ALPHA (HNF-1A) (LIVER 2-29 SPECIFIC PHO1.sub.-- HUMAN HEME OXYGENASE 1 (EC 1.14.99.3) (HO-1) 197-224 PHPPD.sub.-- HUMAN 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (EC 1.13.11.27) 306-333 (4HPPD) PHRX.sub.-- HUMAN ZINC FINGER PROTEIN HRX 521-548 914-974 1637-1666 2215-2286 2289-2316 3317-3344 3448-3475 PHS1.sub.-- HUMAN HEMATOPOIETIC LINEAGE CELL SPECIFIC PROTEIN 43-70 PHS9A.sub.-- HUMAN HEAT SHOCK PROTEIN HSP 90-ALPHA (HSP 86) 443-470 640-674 PHSER.sub.-- HUMAN HEAT-STABLE ENTEROTOXIN RECEPTOR PRECURSOR (GC-C) 511-545 (INTESTINAL PHSF1.sub.-- HUMAN HEAT SHOCK FACTOR PROTEIN 1 (HSF 1) (HEAT SHOCK 113-140 168-209 TRANSCRIPTION FACTOR PHSF2.sub.-- HUMAN HEAT SHOCK FACTOR PROTEIN 2 (HSF 2) (HEAT SHOCK 117-198 TRANSCRIPTION FACTOR PHV2I.sub.-- HUMAN IG HEAVY CHAIN PRECURSOR V-II REGION (ARH-77) 67-108 PHV3T.sub.-- HUMAN IG HEAVY CHAIN V-III REGION (GAL) 47-74 PHX11.sub.-- HUMAN HOMEOBOX PROTEIN HOX-II (TCL-3 PROTO-ONOGENE) 262-289 PHXB7.sub.-- HUMAN HOMEOBOX PROTEIN HOX-B7 (HOX-2C) (HHO.C1) 135-162 PIAPP.sub.-- HUMAN ISLET AMYLOID POLYPEPTIDE 53-80 PIBP3.sub.-- HUMAN INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN 3 183-210 PRECURSOR (IGFBP-3) PIC1.sub.-- HUMAN PLASMA PROTEASE C1 INHIBITOR PRECURSOR (C1 INH) 251-278 PICA2.sub.-- HUMAN INTERCELLULAR ADHESION MOLECULE-2PRECURSOR (ICAM-2) 57-84 PIDE.sub.-- HUMAN INSULIN-DEGRADING ENZYME (EC 3.4.99.45) (INSULINASE) 474-504 907-941 (INSULIN PIF41.sub.-- HUMAN EUKARYOTIC INITIATION FACTOR 4A-I (EIF-4A-I) 232-259 322-349 PIF4B.sub.-- HUMAN INTRINSIC FACTOR PRECURSOR (IF) (GASTRIC INTRINSIC 149-176 406-433 FACTOR) PIF.sub.-- HUMAN INHIBIN BETA A CHAIN PRECURSOR (ACTIVIN BETA-A CHAIN) 308-349 (ERYTHROID PIHBA.sub.-- HUMAN INTERLEUKIN-1 ALPHA PRECURSOR (IL-1 ALPHA) 80-107 183-210 (HEMATOPOIETIN-1) PIL1A.sub.-- HUMAN INTERLEUKIN-1 RECEPTOR, TYPE I PRECURSOR (IL-1R1) 76-110 172-199 (P80) PIL1R.sub.-- HUMAN INTERLEUKIN-1 RECEPTOR, TYPE I PRECURSOR (IL-1R1) 437-467 (P80) PIL1S.sub.-- HUMAN INTERLEUKIN-1 RECEPTOR, TYPE II PRECURSOR (IL-1R2) 159-186 PIL5R.sub.-- HUMAN INTERLEUKIN-5 RECEPTOR ALPHA CHAIN PRECURSOR 87-114 (IL-5R-ALPHA) PIL6.sub.-- HUMAN INTERLEUKIN-6 PRECURSOR (IL-6) (B-CELL STIMULATOR 112-139 FACTOR 2) (BSF-2) PINAI.sub.-- HUMAN INTERFERON ALPHA-1 PRECURSOR 94-121 PINAR.sub.-- HUMAN INTERFERON ALPHA RECEPTOR PRECURSOR (IFN-ALPHA-REC) 90-117 164-191 300-327 508-535 PINB.sub.-- HUMAN INTERFERON BETA PRECURSOR (FIBROBLAST) 88-129 BINI1.sub.-- HUMAN INTERFERON-INDUCED 17 KD PROTEIN (CONTAINS: 83-121 INTERFERON-INDUCED 15 KD BINI6.sub.-- HUMAN INTERFERON-INDUCED 56 KD PROTEIN (IFI-56K) 51-78 216-245 393-430 PINSR.sub.-- HUMAN INSULIN RECEPTOR PRECURSOR (EC 2.7.1.112) (IR) 592-619 PINVO.sub.-- HUMAN INVOLUCRIN 119-146 229-273 326-363 386-450 PIP3K.sub.-- HUMAN 1D-MYO-INOSITOL-TRISPHOSPHATE 3-KINASE A 121-162 (EC 2.7.1.127) (INOSITOL PIPSP.sub.-- HUMAN PLASMA SERINE PROTEASE (PROTEIN C) INHIBITOR 90-117 206-233 PRECURSOR (PCI) PIRBP.sub.-- HUMAN INTERPHOTORECEPTOR RETINOID-BINDING PROTEIN 670-697 PRECURSOR (IRBP) PIRF2.sub.-- HUMAN INTERFERON REGULATORY FACTOR 2 (IRF-2) 157-193 PIT5P.sub.-- HUMAN 75 KD INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 235-262 PRECURSOR PITA2.sub.-- HUMAN PLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (GPIA) 579-606 900-927 (COLLAGEN RECEPTO PITA5.sub.-- HUMAN FIBRONECTIN RECEPTOR ALPHA SUBUNIT PRECURSOR 250-284 657-695 765-792 (INTEGRIN ALPHA-F) PITA6.sub.-- HUMAN INTEGRIN ALPHA-6 PRECURSOR (VLA-6) (INTEGRIN 884-911 944-974 ALPHA-E) (CD49F) PITAL.sub.-- HUMAN LEUKOCYTE ADHESION GLYCOPROTEIN LFA1 ALPHA CHAIN 256-283 310-341 795-822 PRECURSOR (LEUKOC PITAM.sub.-- HUMAN CELL SURFACE GLYCOPROTEIN MAC-1 ALPHA SUBUNIT 1044-1078 PRECURSOR (CR-3 ALPHA PITAV.sub.-- HUMAN VITRONECTIN RECEPTOR ALPHA SUBUNIT PRECURSOR 230-264 (INTEGRIN ALPHA-V) PITB1.sub.-- HUMAN FIBRONECTIN RECEPTOR BETA SUBUNIT PRECURSOR 218-245 354-399 (INTEGRIN BETA-1) (CD29) PITB2.sub.-- HUMAN CELL SURFACE ADHESION GLYCOPROTEINS LFA-1, CR3 AND 339-366 705-732 P150,95, BETA- PITB3.sub.-- HUMAN PLATELET MEMBRANE GLYCOPROTEIN IIIA PRECURSOR 324-351 (GPIIIA) (INTEGRIN BETA- PITB4.sub.-- HUMAN INTEGRIN BETA-4 SUBUNIT PRECURSOR (GP150) 342-369 PITB5.sub.-- HUMAN INTEGRIN BETA-5 SUBUNIT PRECURSOR 724-751 PITB6.sub.-- HUMAN INTEGRIN BETA-6 SUBUNIT PRECURSOR 311-338 352-393 PITB8.sub.-- HUMAN INTEGRIN BETA-8 SUBUNIT PRECURSOR 362-399 696-737 PITI2.sub.-- HUMAN INTER-ALPHA-TRYPSIN INHIBITOR COMPLEX COMPONENT II 134-161 425-452 772-818 PRECURSOR PK1CJ.sub.-- HUMAN KERATIN, TYPE I CYTOSKELETAL 10 (CYTOKERATIN 10) 154-187 196-227 337-399 428-462 (K10) PK1CM.sub.-- HUMAN KERATIN, TYPE I CYTOSKELETAL 13 (CYTOKERATIN 13) 12-142 (K13) PK1CN.sub.-- HUMAN KERATIN, TYPE I CYTOSKELETAL 14 (CYTOKERATIN 14) 122-152 306-335 393-424 (K14) PK1CO.sub.-- HUMAN KERATIN, TYPE I CYTOSKELETAL 15 (CYTOKERATIN 15) 113-143 (K15) PK1CP.sub.-- HUMAN KERATIN, TYPE I CYTOSKELETAL 16 (CYTOKERATIN 16) 308-339 (K16) PK1CQ.sub.-- HUMAN KERATIN, TYPE I CYTOSKELETAL 17 (CYTOKERATIN 17) 122-152 302-346 393-431 (K17) PK1CR.sub.-- HUMAN KERATIN, TYPE I CYTOSKELETAL 18 (CYTOKERATIN 18) 87-114 251-298 337-385 (K18) PK1CS.sub.-- HUMAN KERATIN, TYPE I CYTOSKELETAL 19 (CYTOKERATIN 19) 88-118 317-362 370-397 (K19) PK2C1.sub.-- HUMAN KERATIN, TYPE I CYTOSKELETAL 1 (CYTOKERATIN 1) (K1) 196-226 346-384 390-467 (CYTOSKELETAL 67 PK2C2.sub.-- HUMAN KERATIN, TYPE II CYTOSKELETAL 65 KD 215-248 364-405 461-488 PK2C4.sub.-- HUMAN KERATIN, TYPE II CYTOSKELETAL 4 (CYTOKERATIN 4) (K4) 42-73 126-153 189-248 (FRAGMENT) PK2C5.sub.-- HUMAN KERATIN, TYPE II CYTOSKELETAL 5 (CYTOKERATIN 5) (K5) 185-246 332-373 (58 KD PK2C6.sub.-- HUMAN KERATIN, TYPE II CYTOSKELETAL 6 (CYTOKERATIN 6) (K6) 178-239 325-366 422-449 (K6B KERATIN) PK2C8.sub.-- HUMAN KERATIN, TYPE II CYTOSKELETAL 8 (CYTOKERATIN 8) (K8) 140-167 PK2CA.sub.-- HUMAN KERATIN, TYPE II CYTOSKELETAL 56 KD (K6A KERATIN) 7-34 120-161 217-244 (FRAGMENT) KP6PF.sub.-- HUMAN 6-PHOSPHOFRUCTOKINASE, MUSCLE TYPE (EC 2.7.1.11) 140-167 (PHOSPHOFRUCTOKINASE PK6PL.sub.-- HUMAN 6-PHOSPHOFRUCTOKINASE, LIVER TYPE (EC 2.7.1.11) 49-80 128-159 (PHOSPHOFRUCTOKINASE PKABL.sub.-- HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ABL 498-525 (EC 2.7.1.112) (P150) PKAC.sub.-- HUMAN IG KAPPA CHAIN C REGION 37-85 PKALM.sub.-- HUMAN KALLMANN SYNDROME PROTEIN PRECURSOR (ADHESION 380-414 MOLECULE-LIKE X-LINK PKAP0.sub.-- HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE I-ALPHA 179-206 REGULATORY CHAIN PKAP1.sub.-- HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE I-BETA 177-204 REGULATORY CHAIN PKAP2.sub.-- HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE II-ALPHA 175-202 290-317 REGULATORY CHAIN PKBF1.sub.-- HUMAN NUCLEAR FACTOR KAPPA-B SUBUNIT-1 (NF-KAPPA-B P105 529-570 SUBUNIT PKCRB.sub.-- HUMAN CREATINE KINASE, B CHAIN (EC 2.7.3.2) 301-328 PKECK.sub.-- HUMAN TYROSINE PROTEIN-KINASE ECK PRECURSOR (EC 2.7.1.112) 466-493 (EPITHELIAL CELL PKFER.sub.-- HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FER 219-246 564-591 (EC 2.7.1.112) (P94-FER) PKFER.sub.-- HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FER 101-145 295-322 (EC 2.7.1.112) (C-FES) PKFLT.sub.-- HUMAN RECEPTOR-RELATED TYROSINE KINASE FLT PRECURSOR 208-235 319-353 (EC 2.7.1.112) PKFMS.sub.-- HUMAN MACROPHAGE COLONY STIMULATION FACTOR I RECEPTOR 293-320 PRECURSOR (CSF-1-R) PKFYN.sub.-- HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FYN 199-233 (EC 2.7.1.112) (P59-FYN) KGGPB.sub.-- HUMAN CGMP-DEPENDENT PROTEIN KINASE, BETA ISOZYME (CGK) 17-54 (EC 2.7.1.37) PKHEK.sub.-- HUMAN TYROSINE KINASE HEK RECEPTOR PRECURSOR (EC 2.7.1.112) 646-673 PKINH.sub.-- HUMAN KINESIN HEAVY CHAIN 125-155 425-452 471-542 633-680 689-716 872-899 PKKIT.sub.-- HUMAN KIT PROTO-ONCOGENE TYROSINE KINASE PRECURSOR 235-263 (EC 2.7.1.112) PKMET.sub.-- HUMAN HEPATOCYTE GROWTH FACTOR RECEPTOR PRECURSOR 898-925 (MET PROTO-ONCOGENE PHNH.sub.-- HUMAN KININOGEN, HMW PRECURSOR (ALPHA-2-THIOL PROTEINASE 505-532 INHIBITOR) PKP58.sub.-- HUMAN GALACTOSYLTRANSFERASE ASSOCICATED PROTEIN KINASE 81-108 P58/GTA (EC 2.7.1.-) PKP68.sub.-- HUMAN INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED 149-179 191-225 285-312 PROTEIN KINASE PKP78.sub.-- HUMAN PUTATIVE SERIN/THREONINE-PROTEIN KINASE P78 582-609 (EC 2.7.1.-) PKPCL.sub.-- HUMAN PROTEIN KINASE C, ETA TYPE (EC 2.7.1.-) (NPKC-ETA) 318-345 (PKC-L) PKPT1.sub.-- HUMAN SERINE/THREONINE-PROTEIN KINASE PCTAIRE-1 (EC 2.7.1-) 149-176 209-253 PKPY1.sub.-- HUMAN PYRUVATE KINASE, M1 (MUSCLE) ISOZYME (EC 2.7.1.40) 243-289 (CYTOSOLIC THYROID PKPY2.sub.-- HUMAN PYRUVATE KINASE, M2 (MUSCLE) (EC 2.7.1.40) 243-289 PKPYR.sub.-- HUMAN PYRUVATE KINASE, ISOZYME R (EC 2.7.1.40) 2-29 PKRET.sub.-- HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RET 183-217 (EC 2.7.1.112) PKROS.sub.-- HUMAN ROS PROTO-ONCOGENE TYROSINE KINASE (EC 2.7.1.112) 157-203 (FRAGMENT) PKSRC.sub.-- HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC 143-170 (EC 2.7.1.112) (P60-SRC) PKU7.sub.-- HUMAN LUPUS KU AUTOANTIGEN PROTEIN P70 (70 KD SUBUNIT OF 235-279 KU ANTIGEN) PKU86.sub.-- HUMAN LUPUS KU AUTOANTIGEN PROTEIN P86 (86 KD SUBUNIT OF 258-292 KU ANTIGEN) PKYES.sub.-- HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE YES 209-243 (EC 2.7.1.112) (P61-YES) PLAM1.sub.-- HUMAN LAMIN B1 32-66 117-144 152-193 214-241 397-424 480-507 510-539 PLAMA.sub.-- HUMAN LAMIN A (70 KD LAMIN) 32-88 114-165 292-343 PLAMC.sub.-- HUMAN LAMIN C 32-88 114-165 292-343 PLAR.sub.-- HUMAN LAR PROTEIN PRECURSOR (LEUKOCYTE ANTIGEN RELATED) 935-969 (EC 3.1.3.48) PLA.sub.-- HUMAN LUPUS LA PROTEIN (SJOGREN SYNDROME TYPE B ANTIGEN 191-222 295-342 (SS-B)) PLCAT.sub.-- HUMAN PHOSPHATIDYLCHOLINE-STEROL ACYLTRANSFERASE 131-158 PRECURSOR (EC 2.3.1.43) PLDHH.sub.-- HUMAN L-LACTATE DEHYDROGENASE H CHAIN (EC 1.1.1.27) 81-108 302-329 (LDH-B) PLDHM.sub.-- HUMAN L-LACTATE DEHYDROGENASE M CHAIN (EC 1.1.1.27) 225-252 (LDH-A) PLDLR.sub.-- HUMAN LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR 483-510 PLECH.sub.-- HUMAN ASIALOGLYCOPROTEIN RECEPTOR 1 (PEPATIC LECTIN H1) 62-96 (ASGPR) PLEM3.sub.-- HUMAN P-SELECTIN PRECURSOR (GRANULE MEMBRANE PROTEIN 140) 32-59 87-116 (GMP-140) (PADGEM) PLGUL.sub.-- HUMAN LACTOYLGLUTATHIONE LYASE (EC 4.4.1.5) 83-117 (METHYLGLYOXALASE) PLIF.sub.-- HUMAN LEUKAEMIA INHIBITORY FACTOR PRECURSOR (LIF) 95-122 (DIFFERENTIATION- PLIN1.sub.-- HUMAN LINE-1 REVERSE TRANSCRIPTASE HOMOLOG 152-179 232-263 298-358 671-698 874-901 1036-1066 PLIPG.sub.-- HUMAN TRIACYLGLYCEROL LIPASE PRECURSOR (EC 3.1.1.3) 158-185 (LIPASE, GASTRIC) PLIPS.sub.-- HUMAN HORMONE SENSITIVE LIPASE (EC 3.1.1.-) (HSL) 305-332 PLKHA.sub.-- HUMAN LEUKOTRIENE A-4 HYDROLASE (EC 3.3.2.6) (LTA-4 42-83 290-324 HYDROLASE) (LEUKTRIENE PLMA.sub.-- HUMAN LAMININ A CHAIN PRECURSOR 1318-1345 1741-1771 1785-1812 1824-1851 1884-1921 1965-1999 2026-2059 2091-2118 PLMB1.sub.-- HUMAN LAMININ B1 CHAIN PRECURSOR 1267-1314 1364-1394 1597-1631 1651-1714 1722-1781 PLMB2.sub.-- HUMAN LAMININ B2 CHAIN PRECURSOR 1103-1135 1513-1547 PLMP2.sub.-- HUMAN LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN 2 155-182 PRECURSOR (LAMP-2) PLOX2.sub.-- HUMAN ARACHIDONATE 12-LIPOXYGENASE (EC 1.13.11.31) 341-368 (12-LOX) PLOX5.sub.-- HUMAN ARACHIDONATE 5-LIPOXYGENASE (EC 1.13.11.31) 50-87 (5-LIPOXYGENASE) (5-LO) PLPH.sub.-- HUMAN LACTASE-PHLORIZIN HYDROLASE PRECURSOR (EC 3.2.1.108) 776-803 (EC 3.2.1.62) PLRPB.sub.-- HUMAN PROTEIN-TYROSINE PHOSPHATASE BETA PRECURSOR 140-167 589-637 (EC 3.1.3.48) (PTP-BETA) PLRPG.sub.-- HUMAN PROTEIN-TYROSINE PHOSPHATASE GAMMA PRECURSOR 1081-1108 (EC 3.1.3.48) PLRPZ.sub.-- HUMAN PROTEIN-TYROSINE PHOSPHATASE ZETA PRECURSOR 553-587 1024-1051 1973-2000 (EC 3.1.3.48) (PTP-ZETA) PLSHR.sub.-- HUMAN LUTROPIN-CHORIOGONALDOTROPIC HORMONE RECEPTOR 66-114 448-480 PRECURSOR (LG/CG-5) PLV2B.sub.-- HUMAN IG LAMBDA CHAIN V-II REGION (NEI) 61-88 PLYAG.sub.-- HUMAN LYSOSOMAL ALPHA-GLUCOSIDASE PRECURSOR (EC 3.2.1.20) 885-912 (ACID MALTASE) PM2OM.sub.-- HUMAN MITOCHONDRIAL 2-OXOGLUTARATE/MALATE CARRIER PROTEIN 50-77 (OGCP) PMAC2.sub.-- HUMAN GALACTOSE-SPECIFIC LECTIN (MAC-2 ANTIGEN) 219-246 (IGE-BINDING PROTEIN) (35 KD PMAN9.sub.-- HUMAN MAN(9)-ALPHA-MANNOSIDASE (EC 3.2.1.-) 414-441 PMAMA.sub.-- HUMAN MANNOSE-6-PHOSPHATE ISOMERASE (EC 5.3.1.8) 60-87 (PHOSPHOMANNOSE ISOMERASE) PMANR.sub.-- HUMAN MACROPHAGE MANNOSE RECEPTOR PRECURSOR 248-284 1147-1182 PMAP2.sub.-- HUMAN MICROTUBULE-ASSOCIATED PROTEIN 2 (FRAGMENT) 434-478 PMAP4.sub.-- HUMAN MICROTUBULE-ASSOCIATED PROTEIN 4 408-449 PMAX.sub.-- HUMAN MAX PROTEIN 117-144 PMDM2.sub.-- HUMAN MDM2 PROTEIN (P53-ASSOCIATED PROTEIN) 235-288 PMDR1.sub.-- HUMAN MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROTEIN 1) PMERL.sub.-- HUMAN MERLIN (SCHWANNMIN) 377-407 532-566 PMERO.sub.-- HUMAN MEROSIN HEAVY CHAIN (LAMININ CHAIN A2) (FRAGMENT) 71-105 139-173 431-458 791-818 PMGMT.sub.-- HUMAN METHYLATED-DNA-PROTEIN-CYSTEINE METHYLTRANSFERASE 91-118 (EC 2.1.1.63) (6-O- PMKLP.sub.-- HUMAN MITOTIC KINESIN-LIKE PROTEIN-1 207-234 319-346 510-537 549-608 PMLCH.sub.-- HUMAN MELANIN-CONCENTRATING HORMONE PRECURSOR 8-35 PMLK1.sub.-- HUMAN MIXED LINEAGE KINASE 1 (EC 2.7.1.-) (FRAGMENT) 130-157 321-348 PMMSA.sub.-- HUMAN METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 393-420 PMOES.sub.-- HUMAN MOESIN (MEMBRANE-ORGANIZING EXTENSION SPIKE PROTEIN) 119-146 351-403 PMPCP.sub.-- HUMAN MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN PRECURSOR 286-313 PMPI3.sub.-- HUMAN M-PHASE INDUCER PHOSPHATASE 3 (EC 3.1.3.48) 72-99 PMPKK.sub.-- HUMAN DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE 19-50 KINASE (EC 2.7.1.-) PMPRI.sub.-- HUMAN CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR 1569-1596 2437-2478 PRECURSOR (CI MAN-6- PMRP.sub.-- HUMAN MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 396-423 507-548 PMSHR.sub.-- HUMAN MELANOCYTE STIMULATING HORMONE RECEPTOR (MSH-R) 38-65 (MELANOTROPIN PMSRE.sub.-- HUMAN MACROPHAGE SCAVENGER RECEPTOR TYPES I AND II 173-204 260 (MACROPHAGE ACETYLATED PMTDM.sub.-- HUMAN DNA (CYTOSINE-5)-METHYLTRANSFERASE (EC 2.1.1.37) 387-414 601-628 (DNA PMTF1.sub.-- HUMAN MITOCHONDRIAL TRNASCRIPTION FACTOR 1 PRECURSOR 181-212 (MTTF1) PMUTA.sub.-- HUMAN METHYLMALONYL-COA MUTASE PRECURSOR (EC 5.4.99.2) 468-519 (MCM) PMX1.sub.-- HUMAN INTERFERON-REGULATED RESISTANCE GTP-BINDING PROTEIN 108-150 MXA (INTERFERON- PMX2.sub.-- HUMAN INTERFERON-REGULATED RESISTANCE GTP-BINDING PROTEIN 451-489 670-697 MXB (P78 RELATED PMYBA.sub.-- HUMAN MYB-RELATED PROTEIN A (FRAGMENT) 619-646 PMYBB.sub.-- HUMAN MYB-RELATED PROTEIN B 87-117 PMYCN.sub.-- HUMAN N-MYC PROTO-ONCOGENE PROTEIN 263-300 413-461 PMYC.sub.-- HUMAN MYC PROTO-ONCOGENE PROTEIN 393-422 PMYF4.sub.-- HUMAN MYOGENIC FACTOR MYF-4 (MYOGENIN) 119-146 PMYF5.sub.-- HUMAN MYOGENIC FACTOR MYF-5 121-148 PMYP2.sub.-- HUMAN MYOGENIC P2 PROTEIN 70-110 PMYPR.sub.-- HUMAN MYELIN PROTEOLIPID PROTEIN (PLP) (LIPOPHILIN) 43-70 (CONTAINS: MYELIN PMYSA.sub.-- HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM 38-75 84-111 137-178 236-324 398-435 440-485 (FRAGMENT) PMYSB.sub.-- HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM 48-75 951-981 997-1044 1088-1122 1192-1234 1266-1332 1360-1408 1442-1479 1488-1532 1541-1582 1640-1681 1683-1710 1801-1838 PMYSE.sub.-- HUMAN MYOSIN HEAVY CHAIN, FAST SKELETAL MUSCLE, EMBRYONIC 46-73 860-903 952-1077 1119-1146 1193-1235 1267-1340 1364-1411 1483-1597 1641-1675 1707-1734 1827-1858 PMYSP.sub.-- HUMAN MYOSIN HEAVY CHAIN, PERINATAL CARDIAC MUSCLE 50-77 95-125 141-188 215-272 403-483 507-552 586-624 685-736 784-818 (FRAGMENT) 823-907 946-987 1049-1076 PMYSS.sub.-- HUMAN MYOSIN HEAVY CHAIN, SKELETAL MUSCLE (FRAGMENT) 133-160 193-280 304-349 423-460 468-526 581-608 645-681 743-798 808-835 846-873 PMYT1.sub.-- HUMAN MYELIN TRANSCRIPTION FACTOR 1 (MYTI) (FRAGMENT) 640-678 PNACA.sub.-- HUMAN SODIUM/CALCIUM EXCHANGER PRECURSOR (NA+/CA2+- 492-519 594-621 705-735 EXCHANGE PROTEIN) PNCA2.sub.-- HUMAN NEURAL CELL ADHESION MOLECULE, PHOSPHATIDYLINOSITOL- 255-282 LINKED ISOFORM PNCF1.sub.-- HUMAN NEUTROPHIL CYTOSOL FACTOR 1 (NCF-47K) (47 KD 234-261 310-337 AUTOSOMAL CHRONIC PNCF2.sub.-- HUMAN NEUTROPHIL NADPH OXIDASE FACTOR (P67-PHOX) 5-32 PNEFA.sub.-- HUMAN DNA-BINDING PROTEIN NEFA PRECURSOR 50-77 82-112 343-395 PNEP.sub.-- HUMAN NEPRILYSIN (EC 3.4.24.11) (NEUTRAL ENDOPEPTIDASE) 170-216 644-671 (NEP) PNF1.sub.-- HUMAN NEUROFIBROMIN (NEUROFIBROMATOSIS-RELATED PROTEIN 1145-1172 1388-1422 1639-1666 NF-1) (FRAGMENT) PNFH.sub.-- HUMAN NEUROFILAMENT TRIPLET H PROTEIN (200 KD 91-128 431-490 NEUROFILAMENT PROTEIN) (NF-H) PNFL.sub.-- HUMAN NEUROFILAMENT TRIPLET L PROTEIN (68 KD NEUROFILAMENT 92-126 441-468 PROTEIN) (NF-L) PNFM.sub.-- HUMAN NEUROFILAMENT TRIPLET M PROTEIN (160 KD NEUROFILAMENT 101-141 164-194 215-280 315-372 737-764 794-826 872-913 PROTEIN) (NF-M) PNK1R.sub.-- HUMAN SUBSTANCE-P RECEPTOR (SPR) (NK-1 RECEPTOR) (NK-1R) 338-365 PNK4.sub.-- HUMAN NATURAL KILLER CELLS PROTEIN 4 PRECURSOR 166-193 PNKCR.sub.-- HUMAN NK-TUMOR RECOGNITION PROTEIN (NATURAL-KILLER CELLS 187-214 448-475 559-599 701-742 816-843 1080-1133 CYCLOPHILIN- PNKGA.sub.-- HUMAN NKG2-A AND NKG2-B TYPE II INTEGRAL MEMBRANE 28-55 PROTEINS PNOSI.sub.-- HUMAN NITRIC-OXIDE SYNTHASE, BRAIN (EC 1.14.13.39) (NOS, 389-416 1116-1146 1292-1319 TYPE I) PNOS3.sub.-- HUMAN NITRIC-OXIDE SYNTHASE, ENDOTHELIAL (EC 1.14.13.39) 389-416 (EC-NOS) (NOS, PNTGI.sub.-- HUMAN SODIUM- AND CHLORIDE-DEPENDENT GABA TRANSPORTER 1 131-158 PNTR.sub.-- HUMAN NEUROTENSIN RECEPTOR (NT-R) 57-84 PNTSE.sub.-- HUMAN SODIUM DEPENDENT SEROTONIN TRANSPORTER (5HT 71-98 TRANSPORTER) (5HTT) PNTTA.sub.-- HUMAN SODIUM- AND CHLORIDE-DEPENDENT TAURINE TRANSPORTER 120-147 PNU2M.sub.-- HUMAN NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 2 (EC 1.6.5.3) 202-240 PNU4M.sub.-- HUMAN NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4 (EC 1.6.5.3) 164-191 372-399 PNUBN.sub.-- HUMAN NUCLEOBINDIN PRECURSOR 46-73 360-387 PNUCL.sub.-- HUMAN NUCLEOLIN (PROTEIN C23) 462-508 PNY3R.sub.-- HUMAN PUTATIVE NEUROPEPTIDE Y RECEPTOR TYPE 3 (PNY3-R) 115-142 (FB22) (NPYRL) POAT.sub.-- HUMAN ORNITHINE AMINOTRANSFERASE PRECURSOR (EC 2.6.1.13) 98-128 (ORNITHINE-OXO- POC3A.sub.-- HUMAN OCTAMER-BINDING TRANSCRIPTION FACTOR 3A (OCT-3A) 139-173 POC3B.sub.-- HUMAN OCTAMER-BINDING TRANSCRIPTION FACTOR 3B (OCT-3B) 37-78 POCRL.sub.-- HUMAN LOWE'S OCULOCEREBRORENAL SYNDROME PROTEIN 704-735 PODB2.sub.-- HUMAN LIPOAMIDE ACYLTRANSFERASE COMPONENT (E2) PRECURSOR 100-127 375-402 OF BRANCHED-CHAI PODP2.sub.-- HUMAN DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT (E2) 72-99 OF PYRUVATE POMGP.sub.-- HUMAN OLIODENDROCYTE-MYELIN GLYCOPROTEIN PRECURSOR (OMG) 53-80 POPSB.sub.-- HUMAN BLUE-SENSITIVE OPSIN (BLUE CONE PHOTORECEPTOR 220-247 PIGMENT) POPSG.sub.-- HUMAN GREEN-SENSITIVE OPSIN (GREEN CONE PHOTORECEPTOR 90-117 239-266 PIGMENT) POPSR.sub.-- HUMAN RED-SENSITIVE OPSIN (RED CONE PHOTORECEPTOR PIGMENT) 90-117 239-266 POSTP.sub.-- HUMAN OSTEOPONTIN PRECURSOR (BONE SIALOPROTEIN 1) 239-266 (URINARY STONE PROTEIN) POTC.sub.-- HUMAN ORNITHINE CARBAMOYLTRANSFERASE PERCURSOR (EC 2.1.3.3) 170-204 POTNC.sub.-- HUMAN OSTEONECTIN PRECURSOR (BASEMENT MEMBRANE PROTEIN 173-207 BM-40) POXYB.sub.-- HUMAN OXYSTEROL-BINDING PROTEIN 89-123 190-217 290-317 577-604 POXYR.sub.-- HUMAN OXYTOCIN RECEPTOR (OT-R) 350-377 PP107.sub.-- HUMAN RETINOBLASTOMA-ASSOCIATED PROTEIN-LIKE 107 KD 159-186 422-449 HOMOLOG (P107) PP1DP.sub.-- HUMAN DNA POLYMERASE ALPHA HOLOENZYME-ASSOCIATED 19-60 637-664 PROTEIN P1 PP47.sub.-- HUMAN PLECKSTRIN (P47) 298-325 PP4HA.sub.-- HUMAN PROLYL 4-HYDROXYLASE ALPHA SUBUNIT PRECURSOR 26-69 191-218 (EC 1.14.11.2) PP60.sub.-- HUMAN MITOCHONDRIAL MATRIX PROTEIN P1 PRECURSOR (P60 72-99 271-298 361-407 LYMPHOCYTE PROTEIN) PP85A.sub.-- HUMAN PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY ALPHA 12-39 428-476 586-613 688-715 SUBUNIT (P13-KINASE PPAP1.sub.-- HUMAN PANCREATITIS ASSOCIATED PROTEIN 1 PRECURSOR 77-104 PPAX5.sub.-- HUMAN PAIRED BOX PROTEIN PAX-5 (B-CELL SPECIFIC 157-187 TRANSCRIPTION FACTOR) PPDGA.sub.-- HUMAN PLATELET-DERIVED GROWTH FACTOR, A CHAIN PRECURSOR 38-65 (PDGF A-CHAIN) PPEC1.sub.-- HUMAN PLATELET ENDOTHELIAL CELL ADHESION MOLECULE 685-719 PRECURSOR (PECAM-1) PPENK.sub.-- HUMAN PROENKEPHALIN A PRECURSOR 142-176 PPERE.sub.-- HUMAN EOSINOPHIL PEROXIDASE PRECURSOR (EC 1.11.1.7) (EPO) 308-335 (FRAGMENT) PPERF.sub.-- HUMAN PERFORIN 1 PRECURSOR (P1) (LYMPHOCYTE PORE FORMING 411-438 PROTEIN) (PFP) PPF4L.sub.-- HUMAN PLATELET BASIC PROTEIN PRECURSOR (PBP) (CONTAINS: 21-55 CONNECTIVE-TISSUE PPGCA.sub.-- HUMAN CARTILAGE-SPECIFIC PROTEOGLYCAN CORE PROTEIN 73-100 PRECURSOR (CSPCP) PPGCS.sub.-- HUMAN LARGE FIBROBLAST PROTEOGLYCAN PRECURSOR (VERSICAN) 64-98 1390-1417 1553-1580 (CHONDROITIN) PPGDH.sub.-- HUMAN 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE (NAD(+)) 87-118 (EC 1.1.1.141) (PGDH) PPGDR.sub.-- HUMAN BETA PLATELET-DERIVED GROWTH FACTOR RECEPTOR 294-321 354-384 465-495 PRECURSOR (EC 2.7.1.112) PPGDS.sub.-- HUMAN ALPHA PLATELET-DERIVED GROWTH FACTOR RECEPTOR 64-94 347-395 461-488 524-551 986-1058 PRECURSOR PPGHS.sub.-- HUMAN PROSTAGLANDIN G/H SYNTHASE PRECURSOR (EC 1.14.99.1) 331-358 (CYCLOOXYGENSE) PPGS1.sub.-- HUMAN BONE/CARTILAGE PROTEOGLYCAN I PRECURSOR (BIGLYCAN) 100-127 (PG-S1) PPH4H.sub.-- HUMAN PHENYLALANINE-4-HYDROXYLASE (EC 1.14.16.1) (PAH) 239-266 (PHE-4- PPHB.sub.-- HUMAN PROHIBITIN 41-68 PPHOS.sub.-- HUMAN PHOSDUCIN (33 KD PHOTOTRANSDUCING PROTEIN) (MEKA 184-225 PROTEIN) PPHS1.sub.-- HUMAN GLYCOGEN PHOSPHORYLASE, LIVER FORM (EC 2.4.1.1) 116-143 PPHS2.sub.-- HUMAN GLYCOGEN PHOSPHORYLASE, MUSCLE FORM (EC 2.4.1.1) 532-559 PPHS3.sub.-- HUMAN GLYCOGEN PHOSPHORYLASE, BRAIN FORM (EC 2.4.1.1) 533-560 PPIP4.sub.-- HUMAN 1-PHOSPHATIDYLINOSITOR-4,5-BISPHOSPHATE 908-935 PHOSPHODIESTERASE BETA 2 PPIP5.sub.-- HUMAN 1-PHOSPHATIDYLINOSITOR-4,5-BISPHOSPHATE 142-169 239-266 PHOSPHODIESTERASE GAMMA 2 PPLAK.sub.-- HUMAN PLAKOGLOBIN (DESMOPLAKIN III) 373-400 PPLSL.sub.-- HUMAN L-PLASTIN (FIMBRIN) 507-534 PPLST.sub.-- HUMAN T-PLASTIN (FIMBRIN) 510-561 PPM22.sub.-- HUMAN PHERIPHERAL MYELIN PROTEIN 22 (PMP-22) 3-33 PPMGB.sub.-- HUMAN PHOSPHOGLYCERATE MUTASE, BRAIN FORM (EC 5.4.2.1) 81-111 (PGAM-B) (EC 5.4.2.4) PPMGM.sub.-- HUMAN PHOSPHOGLYCERATE MUTASE, MUSCLE FORM (EC 5.4.2.1) 81-115 (PGAM-M) PPML1.sub.-- HUMAN PROBABLE TRANSCRIPTION FACTOR PML-1 551-585 PPMLX.sub.-- HUMAN PROBABLE TRANSCRIPTION FACTOR PML-X 551-585 PPMSC.sub.-- HUMAN AUTOANTIGEN PM-SCL 103-130 PPOGA.sub.-- HUMAN DNA-BINDING PROTEIN PO-GA 14-51 182-209 610-637 667-699 PPOL1.sub.-- HUMAN RETROVIRUS-RELATED POL POLYPROTEIN (REVERSE 774-804 TRANSCRIPTASE PPOL2.sub.-- HUMAN RETROVIRUS-RELATED POL POLYPROTEIN (FRAGMENT) 78-138 171-205 PPOR1.sub.-- HUMAN OUTER MITOCHONDRIAL MEMBRANE PROTEIN PORIN 33-76 189-216 (VOLTAGE-DEPENDENT ANIO PPPAP.sub.-- HUMAN PROSTATIC ACID PHOSPHATASE PRECURSOR (EC 3.1.3.2) 235-269 PPPAS.sub.-- HUMAN RED CELL ACID PHOPHATASE 1, ISOZYME S (EC 3.1.3.2) 26-53 (ACP1) PPPOL.sub.-- HUMAN NAD(+) ADP-RIBOSYLTRANSFERASE (EC 2.4.2.30) 699-729 972-1003 (POLY(ADP-RIBOSE) PPRC2.sub.-- HUMAN PROTEASOME COMPONENT C2 (EC 3.4.99.46) (MACROPAIN 39-66 SUBUNIT C2) PPRC3.sub.-- HUMAN PROTEASOME COMPONENT C3 (EC 3.4.99.46) (MACROPAIN 34-61 SUBUNIT C3) PPRC9.sub.-- HUMAN PROTEASOME COMPONENT C9 (EC 3.4.99.46) (MACROPAIN 203-261 SUBUNIT C9) PPRGR.sub.-- HUMAN PROGESTERONE RECEPTOR (PR) (FORMS A AND B) 846-890 PPRTS.sub.-- HUMAN VITAMIN K-DEPENDENT PROTEIN S (BLOOD CLOTTING) 337-371 PRECURSOR PPRTZ.sub.-- HUMAN VITAMIN K-DEPENDENT PROTEIN Z PRECURSOR 29-56 PPSOR.sub.-- HUMAN PSORIASIN 65-92 PPSPD.sub.-- HUMAN PULMONARY SURFACTANT-ASSOCIATED PROTEIN D PRECURSOR 224-251 (PSP-D) (SP-D) PPTHY.sub.-- HUMAN PARATHYROID HORMONE PRECURSOR (PARATHYRIN) 86-113 PPTN1.sub.-- HUMAN PROTEIN-TYROSINE PHOSPHATASE 1B (EC 3.1.3.48) 136-177 (PTP-1B) PPTN2.sub.-- HUMAN T-CELL PROTEIN-TYROSINE PHOSPHATASE (EC 3.1.3.48) 59-86 138-178 (TCPTP) PPTN6.sub.-- HUMAN PROTEIN-TYROSINE PHOSPHATASE 1C (EC 3.1.3.48) 227-261 512-580 (PTP-1C) (HEMATOPOIETIC PPTNB.sub.-- HUMAN PROTEIN-TYROSINE PHOSPHATASE 2C (EC 3.1.3.48) 41-68 218-245 (PTP-2C) (PTP-1D) PPTNC.sub.-- HUMAN PROTEIN-TYROSINE PHOSPHATASE G1 (EC 3.1.3.48) 618-645 695-722 (PTPG1) PPTRR.sub.-- HUMAN PARATHYROID HORMONE/PARATHYROID HORMONE-RELATED 368-395 PEPTIDE PPTX3.sub.-- HUMAN PENTAXIN-RELATED PROTEIN PTX3 PRECURSOR 74-101 PPUR2.sub.-- HUMAN PHOSPHORIBOSYLAMINE-GLYCINE LIGASE (EC 6.3.4.13) 803-830 (GARS) (GLYCINAMIDE PPUR6.sub.-- HUMAN MULTIFUNCTIONAL PROTEIN ADE2H1 391-418 (PHOSPHORIBO SYLAMINOIMIDAZOLE- PPUR8.sub.-- HUMAN ADENYLOSUCCINATE LYASE (EC 4.3.2.2) 204-231 (ADENYLOSUCCINASE) (ASL) PPYR5.sub.-- HUMAN URIDINE 5'-MONOPHOSPHATE SYNTHASE (UMP SYNTHASE 120-150 (UMP SYNTHASE) (OROTATE PPYRG.sub.-- HUMAN CTP SYNTHASE (EC 6.3.4.2) (UTP-AMMONIA LIGASE) (CTP 86-113 300-334 SYNTHETASE) PPZP.sub.-- HUMAN PREGNANCY ZONE PROTEIN PRECURSOR 315-354 990-1024 1162-1189 1405-1432 PRA74.sub.-- HUMAN TRANSCRIPTION FACTOR IIF, ALPHA SUBUNIT (TFIIF, 474-501 ALPHA SUBUNIT) PRAB4.sub.-- HUMAN RAS-RELATED PROTEIN RAB-4 38-65 PRAB6.sub.-- HUMAN RAS-RELATED PROTEIN RAB-6 123-150 PRADI.sub.-- HUMAN RADIXIN 308-335 414-463 510-537 PRB11.sub.-- HUMAN RAS-RELATED PROTEIN RAB-11 (24KG) (YL-8) 151-178 PRBB3.sub.-- HUMAN RETINOBLASTOMA BINDING PROTEIN 3 (RBBP-3) 129-156 161-223 (PRB-BINDING PROTEIN E2F-1) PRDP.sub.-- HUMAN RD PROTEIN 9-53 PRENI.sub.-- HUMAN RENIN PRECURSOR, RENAL (EC 3.4.23.15) 136-163 (ANGIOTENSINOGENASE) PREST.sub.-- HUMAN RESTIN (CYTOPLASMIC LINKER PROTEIN-170 ALPHA-2) 190-217 333-370 445-472 571-619 744-771 784-852 1023-1050 1088-1139 1157-1184 (CLIP-170) 1216-1306 PRFA1.sub.-- HUMAN REPLICATION PROTEIN A 70 KD DNA-BINDING SUBUNIT 208-235 425-455 (RP-1) (RF-A) PRFP.sub.-- HUMAN TRANSFORMING PROTEIN (RFP) (RET FINGER PROTEIN) 183-217 PRH.sub.-- HUMAN BLOOD GROUP RH(D) POLYPEPTIDE 361-388 PRIB1.sub.- - HUMAN RIBOPHORIN I PRECURSOR 81-108 496-530 PRIB1.sub.-- HUMAN RIBOPHORIN II PRECURSOR 142-172 361-388 PRIR1.sub.-- HUMAN RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M1 CHAIN 42-69 370-400 (EC 1.17.4.1) PRL22.sub.-- HUMAN 60S RIBOSOMAL PROTEIN L22 (EPSTEIN-BARR VIRUS SMALL 78-112 RNA ASSOCIATED PRL26.sub.-- HUMAN 60S RIBOSOMAL PROTEIN L26 55-89 103-137 PRL9.sub.-- HUMAN 60S ROBOSOMAL PROTEIN L9 146-192 PRLA0.sub.-- HUMAN 60S ACIDIC ROBOSOMAL PROTEIN P0 (L10E) 138-165 PRO5.sub.-- HUMAN 52 KD RO PROTEIN (SJOREN SYNDROME TYPE A ANTIGEN 190-235 238-265 (SS-A)) PRO6.sub.-- HUMAN 60 KD RO PROTEIN (SJOREN SYNDROME TYPE A ANTIGEN 192-245 (SS-A)) PROC.sub.-- HUMAN HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS C1/C2 16-43 (HNRNP C1 AND HNPNP PROL.sub.-- HUMAN HETEROGENEOUS RIBONUCLEOPROTEIN L (HRNPL) 501-528 PROU.sub.-- HUMAN HETEROGENEOUS RIBONUCLEOPROTEIN U 630-657 PRPB1.sub.-- HUMAN DNA-DIRECTED RNA POLYMERASE II 215 KD POLYPEPTIDE 269-296 665-720 879-906 1314-1341 1371-1398 PRPB2.sub.-- HUMAN DNA-DIRECTED RNA POLYMERASE II 140 KD POLYPEPTIDE 626-667 1008-1035 PRPB3.sub.-- HUMAN DNA-DIRECTED RNA POLYMERASE II 33 KD POLYPEPTIDE 242-274 PRRXA.sub.-- HUMAN RETINOIC ACID RECEPTOR RXR-ALPHA 318-352 PRRXB.sub.-- HUMAN RETINOIC ACID RECEPTOR RXR-BETA ISOFORM 1 376-403 PRRXC.sub.-- HUMAN RETINOIC ACID RECEPTOR RXR-BETA ISOFORM 2 396-423 PRS12.sub.-- HUMAN 40S RIBOSOMAL PROTEIN S12 60-87 PRS16.sub.-- HUMAN 40S RIBOSOMAL PROTEIN S16 89-116 PRS25.sub.-- HUMAN 40S RIBOSOMAL PROTEIN S25 26-53 PRS27.sub.-- HUMAN 40S RIBOSOMAL PROTEIN S27A 14-41 PRS7.sub.-- HUMAN 40S RIBOSOMAL PROTEIN S7 (S8) 73-100 PRS8.sub.-- HUMAN 40S RIBOSOMAL PROTEIN S8 136-163 PRTC1.sub.-- HUMAN RAS-LIKE PROTEIN TC21 123-150 PRU1A.sub.-- HUMAN U1 SMALL NUCLEAR RIPONUCLEOPROTEIN A (U1 SNRNP A 13-47 PROTEIN) PRU2B.sub.-- HUMAN U2 SMALL NUCLEAR RIPONUCLEOPROTEIN B" 17-44 PRYNR.sub.-- HUMAN RYANODINE RECEPTOR, SKELETAL MUSCLE 154-188 495-522 866-893 2750-2777 2820-2847 3304-3331 3529-3556 3912-3939 4921-4948 PS10A.sub.-- HUMAN S-100 PROTEIN, ALPHA CHAIN 12-54 PS10B.sub.-- HUMAN S-100 PROTEIN, BETA CHAIN 14-56 PS10D.sub.-- HUMAN S-100D PROTEIN 31-58 PSAHH.sub.-- HUMAN ADENOSYLHOMOCYSTEINASE (EC 3.3.1.1) (S-ADENOSYL-L- 389-416 HOMOCYSTEINE PAST1.sub.-- HUMAN DNA-BINDING PROTEIN SATB1 709-736 PSCCA.sub.-- HUMAN SQUAMOUS CELL CARCINOMA ANTIGEN (SCCA) 78-105 (PROTEIN T4-A) PSCF.sub.-- HUMAN STEM CELL FACTOR PRECURSOR (SCF) 74-101 PSEM1.sub.-- HUMAN SEMENOGELIN I PROTEIN PRECURSOR (SGI) (CONTAINS: 64-98 176-226 228-329 334-368 SEMINAL BASIC PSEM2.sub.-- HUMAN SEMENOGELIN II PRECURSOR (SGII) 71-98 183-226 304-355 405-439 539-575 PSET.sub.-- HUMAN SET PROTEIN 38-65 154-181 PSG1.sub.-- HUMAN SECRETOGRANIN I PRECURSOR (CHROMOGRANIN B) 144-178 PSG2.sub.-- HUMAN SECRETOGRANIN II PRECURSOR (CHROMOGRANIN C) 254-281 290-317 534-561 PSIAL.sub.-- HUMAN BONE SIALOPROTEIN II PRECURSOR (BSP II) 84-113 155-193 256-283 PSN2L.sub.-- HUMAN POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L 231-258 545-572 PSNOB.sub.-- HUMAN SK1-RELATED ONCOGENE SNON 414-441 PSPCA.sub.-- HUMAN SPECTRIN ALPHA CHAIN 193-220 570-621 655-712 1099-1126 1461-1502 1882-1901 1988-2022 2120-2154 2223-2250 2346-2373 PSPCB.sub.-- HUMAN SPECTRIN BETA CHAIN, ERYTHROCYTE 150-177 316-350 486-520 648-675 987-1021 1027-1083 1287-1324 1347-1374 1834-1861 PSPRE.sub.-- HUMAN SEPIAPTERIN REDUCTASE (EC 1.1.1.153) (SPR) 90-124 PSRF.sub.-- HUMAN SERUM RESPONSE FACTOR (SRF) 77-104 480-507 PSRPR.sub.-- HUMAN SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA SUBUNIT 76-110 (SR-ALPHA) PSSR1.sub.-- HUMAN SOMATOSTATIN RECEPTOR TYPE 1 289-316 PSTHM.sub.-- HUMAN STATHMIN (PHOSPHOPROTEIN P19) (ONCOPROTEIN P18) 47-74 (LEUKEMIA-ASSOCIATED PSUIS.sub.-- HUMAN SUCRASE-ISOMALTASE, INTESTINAL (EC 3.2.1.48)/ 1748-1775 (EC 3.2.1.10) PSYB1.sub.-- HUMAN SYNAPTOBREVIN 1 31-67 PSYD2.sub.-- HUMAN ASPARTYL-TRNA SYNTHETASE ALPHA-2 SUBUNIT 44-71 (EC 6.1.1.12) (ASPARTATE- PSYEP.sub.-- HUMAN MULTIFUNCTIONAL AMINOACYL-TRNA SYNTHETASE 174-201 740-771 (CONTAINS: GLUTAMYL-TRN PSYH.sub.-- HUMAN HISTIDYL-TRAN SYNTHETASE (EC 6.1.1.21) (HISTIDINE- 380-442 468-502 TRNA LIGASE) PSYT1.sub.-- HUMAN SYNAPTOTAGMIN I (P65) 140-167 250-277 PSYTC.sub.-- HUMAN THREONYL-TRAN SYNTHETASE, CYTOPLASMIC (EC 6.1.1.3) 497-524 658-685 (THREONINE-TRNA PSYV.sub.-- HUMAN VALYL-TRNA SYNTHETASE (EC 6.1.1.9) (VALINE-TRNA 230-257 413-440 LIGASE) (VALRS) PSYW.sub.-- HUMAN TRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2) 93-127 196-223 (TRYPTOPHAN-TRNA LIGASE) PT2EB.sub.-- HUMAN TRANSCRIPTION INITIATION FACTOR IIE-BETA CHAIN 34-68 (TFIIE-BETA) PTAP4.sub.-- HUMAN TRANSCRIPTION FACTOR AP-4 (FRAGMENT) 169-196 245-272 PTAPB.sub.-- HUMAN TRANSCRIPTION FACTOR JUN-B 296-323 PTAPD.sub.-- HUMAN TRANSCRIPTION FACTOR JUN-D 291-333 PTAU1.sub.-- HUMAN MICROTUBULE-ASSOCIATED PROTEIN TAU 278-305 PTAU2.sub.-- HUMAN MICROTUBULE-ASSOCIATED PROTEIN TAU, FETAL 211-238 PTCO1.sub.-- HUMAN TRANSCOBALAMIN I PRECURSOR 201-241 330-357 PTCP1.sub.-- HUMAN T-COMPLEX PROTEIN 1 (TCP-1) 316-343 PTDT.sub.-- HUMAN DNA NUCLEOTIDYLEXOTRANSFERASE (EC 2.7.7.31) 61-95 (TERMINAL ADDITION ENZYME) PTEK.sub.-- HUMAN RECEPTOR TYROSINE-PROTEIN KINASE TEK PRECURSOR 644-678 969-996 1007-1036 (EC 2.7.1.112) (HPK-6) PTF2B.sub.-- HUMAN TRANSCRIPTION INITIATION FACTOR 11B (FT11B) 135-162 PTFE3.sub.-- HUMAN TRANSCRIPTION FACTOR E3 (FRAGMENT) 43-70 122-149 178-226 PTFS2.sub.-- HUMAN TRANSCRIPTION ELONGATION FACTOR S-II 29-56 PTF.sub.-- HUMAN TISSUE FACTOR PRECURSOR (TF) (COAGULATION FACTOR III) 148-175 PTGF1.sub.-- HUMAN TRANSFORMING GROWTH FACTOR BETA 1 PRECURSOR 148-185 (TGF-BETA 1) PTGF2.sub.-- HUMAN TRANSFORMING GROWTH FACTOR BETA 2 PRECURSOR 243-270 (TGF-BETA 2) (GLIOBLASTO PTGFA.sub.-- HUMAN TRANSFORMING GROWTH FACTOR ALPHA PRECURSOR 87-114 (TGF-ALPHA) (EGF-LIKE TGR PTGLK.sub.-- HUMAN PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE K 258-285 (EC 2.3.2.13) PTHBS.sub.-- HUMAN THROMBOSPONDIN PRECURSOR 110-165 284-314 PTHIK.sub.-- HUMAN 3-KETOACYL-COA THIOLASE PEROXISOMAL PRECURSOR 185-212 (EC 2.3.1.16) (BETA- PTKNB.sub.-- HUMAN PROTACHYKININ BETA PRECURSOR (CONTAINS: 11-38 SUBSTANCE P, NEUROKININ A PTLE1.sub.-- HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 1 626-653 PTLE2.sub.-- HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 2 94-125 PTLE4.sub.-- HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 4 (FRAGMENT) 304-331 PTOPA.sub.-- HUMAN DNA TOPOISOMERASE II, ALPHA ISOZYME (EC 5.99.1.3) 19-46 503-532 PTOPB.sub.-- HUMAN DNA TOPOISOMERASE II, BETA ISOZYME (EC 5.99.1.3) 35-65 616-647 PTPM3.sub.-- HUMAN TROPOMYOSIN, FIBROBLAST ISOFORM TM3 16-74 82-116 PTPMA.sub.-- HUMAN TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE 16-43 47-74 82-116 147-174 191-237 243-277 PTPMB.sub.-- HUMAN TROPOMYOSIN BETA CHAIN, SKELETAL MUSCLE 37-116 193-240 PTPMC.sub.-- HUMAN TROPOMYOSIN ALPHA CHAIN, CARDIAC MUSCLE 16-74 82-116 193-277 PTPMF.sub.-- HUMAN TROPOMYOSIN, FIBROBLAST AND EPITHELIAL MUSCLE-TYPE 37-116 210-240 243-270 (TM36) (TME1) PTPMG.sub.-- HUMAN TROPOMYOSIN, FIBROBLAST NON-MUSCLE TYPE (TM30PL) 46-80 111-138 158-199 207-234 PTPM1.sub.-- HUMAN TROPOMYOSIN, CYTOSKELETAL TYPE (TM30NM) 46-80 111-138 172-199 PTPMS.sub.-- HUMAN TROPOMYOSIN ALPHA CHAIN, SMOOTH MUSCLE (FRAGMENT) 25-59 147-178 PTPP2.sub.-- HUMAN TRIPEPTIDYL-PEPTIDASE II (EC 3.4.14.10) (TPP II) 153-187 1004-1031 1160-1187 (TRIPEPTIDYL PTPR.sub.-- HUMAN TPR ONCOGENE (FRAGMENT) 82-147 PTR36.sub.-- HUMAN TREB36 PROTEIN 18-45 242-269 PTRFR.sub.-- HUMAN THYROTROPIN-RELEASING HORMONE RECEPTOR (TRH-R) 349-383 (THYROLIBERIN PTRIC.sub.-- HUMAN TROPONIN I, CARDIAC MUSCLE 36-63 PTRKA.sub.-- HUMAN HIGH AFFINITY NERVE GROWTH FACTOR RECEPTOR 66-93 117-148 PRECURSOR (EC 2.7.1.112) PTRSR.sub.-- HUMAN TRANSFERRIN RECEPTOR PROTEIN (TR) (ANTIGEN CD71) 188-215 366-393 (T9) PTSHR.sub.-- HUMAN THYROTROPIN RECEPTOR PRECURSOR (TSH-R) 87-117 420-447 PTTK.sub.-- HUMAN PROTEIN KINASE TKK (EC 2.7.1.-) 170-197 324-359 510-544 549-583 PTYK2.sub.-- HUMAN NON-RECEPTOR TYROSINE-PROTEIN KINASE TYK2 150-177 (EC 2.7.1.112) PUBA1.sub.-- HUMAN UBIQUITIN-ACTIVATING ENZYME E1 (A1S9 PROTEIN) 448-475 PUBF1.sub.-- HUMAN NUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING 227-254 FACTOR 1) (UBF-1) PUDP0.sub.-- HUMAN UDP-GLUCURONOSYLTRANSFERASE PRECURSOR MICROSOMAL (EC 2.4.1.17) PUFO.sub.-- HUMAN RECEPTOR TYROSINE-PROTEIN KINASE UFO PRECURSOR 488-522 (EC 2.7.1.112) PUSF1.sub.-- HUMAN UPSTREAM STIMULATORY FACTOR 1 251-295 PVATC.sub.-- HUMAN VACULAR ATP SYNTHASE SUBUNIT C (EC 3.6.1.34) 47-74 117-147 (V-ATPASE C SUBUNIT) PVIL1.sub.-- HUMAN VILLIN 338-372 427-461 717-744 PVIME.sub.-- HUMAN VIMENTIN 119-146 233-260 PVINC.sub.-- HUMAN VINCULIN 108-135 PVPRT.sub.-- HUMAN RETROVIRUS-RELATED PROTEASE (EC 3.4.23.-) 95-134 PWEE1.sub.-- HUMAN WEE1-LIKE PROTEIN KINASE (EC 2.7.1.112) 354-388 PWT1.sub.-- HUMAN WILMS' TUMOR PROTEIN (WT33) 247-274 PXBP1.sub.-- HUMAN X BOX BINDING PROTEIN-1 (XBP-1) (TREB5 PROTEIN) 97-135 PXPAC.sub.-- HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-A CELLS 180-211 (XERODERMA PIGMENTOSUM PXPCC.sub.-- HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-C CELLS 134-168 701-728 (XERODERMA PIGMENTOSUM PXPDC.sub.-- HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-D CELLS 264-291 (XERODERMA PIGMENTOSUM PXPGC.sub.-- HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-G CELLS 83-110 715-766 1047-1081 (XERODERMA PIGMENTOSUM PXRCC.sub.-- HUMAN DNA-REPAIR PROTEIN XRCC1 23-57 PZN10.sub.-- HUMAN ZINC FINGER PROTEIN 10 (ZINC FINGER PROTEIN KOX1) 29-56 (FRAGMENT) PZN40.sub.-- HUMAN ZINC FINGER PROTEIN 40 (HUMAN IMMUNODEFICIENCY 17-62 307-334 1071-1098 1469-1500 2013-2057 2146-2180 VIRUS TYPE I ENHANCER- PZN45.sub.-- HUMAN ZINC FINGER PROTEIN 45 (BRC1744) (FRAGMENT) 3-30 201-228 PZN46.sub.-- HUMAN ZINC FINGER PROTEIN 46 (ZINC FINGER PROTEIN KUP) 121-149 - Search Results Summary for PCTLZIP, P1CTLZIP, and P2CTLZIP Motifs PCTLZIP P1CTLZIP P2CTLZIP LIBRARY FILE LIBRARY FILE LIBRARY FILE PENV.sub.-- FOAMV 481-496 PENV.sub.-- BIVO6 434-450 PENV.sub.-- BIVO6 525-542 PENV.sub.-- HV1MA 438-453 PENV.sub.-- BIV27 463-479 PENV.sub.-- BIV27 554-571 PENV.sub.-- HV1MF 183-198 PENV.sub.-- FOAMV 481-496 864-880 PENV.sub.-- FENV1 30-47 630-647 PENV.sub.- - HV1RH 445-460 PENV.sub.-- HV1KB 752-768 PENV.sub.-- FIVPE 781-798 PENV.sub.-- HV1SC 186-201 PENV.sub.-- HV1MA 437-453 PENV.sub.-- FIVSD 779-796 PENV.sub.-- HV1Z2 123-138 PENV.sub.-- HV1MF 183-198 PENV.sub.-- FIVT2 780-797 PENV.sub.-- HV1ZH 438-453 PENV.sub.-- HV1RH 444-460 PENV.sub.-- FLVC6 38-55 624-641 PENV.sub.-- HV2BE 750-765 PENV.sub.-- HV1S1 738-754 PENV.sub.-- FLVGL 605-622 PENV.sub.-- HV2D1 741-756 PENV.sub.-- HV1SC 186-201 PENV.sub.-- FLVLB 625-642 PENV.sub.-- HV2G1 741-756 PENV.sub.-- HV1Z2 123-138 PENV.sub.-- FLVSA 602-619 PENV.sub.-- HV2NZ 742-757 PENV.sub.-- HV1Z3 117-133 PENV.sub.-- FOAMV 710-727 957-974 PENV.sub.-- HV2RO 751-766 PENV.sub.-- HV1ZH 437-453 PENV.sub.-- FSVGA 625-642 PENV.sub.-- HV2SB 743-758 PENV.sub.-- HV2BE 750-765 PENV.sub.-- FSVGB 605-622 PENV.sub.-- HV2ST 745-760 PENV.sub.-- HV2D1 741-756 PENV.sub.-- FSVSM 608-625 PENV.sub.-- JSRV 104-119 PENV.sub.-- HV2G1 741-756 PENV.sub.-- HV1OY 123-140 PENV.sub.-- MMTVB 618-633 PENV.sub.-- HV2NZ 742-757 PENV.sub.-- HV1Z2 410-427 PENV.sub.-- MMTVG 618-633 PENV.sub.-- HV2RO 751-766 PENV.sub.-- HV1Z3 154-171 PENV.sub.-- SIVMK 139-154 PENV.sub.-- HV2SB 743-758 PENV.sub.-- HV2CA 750-767 PENV.sub.-- SIVML 139-154 PENV.sub.-- HV2ST 745-760 PENV.sub.-- MCFF 600-617 PHEMA.sub.-- CVBLY 391-406 PENV.sub.-- JSRV 104-119 541-557 PENV.sub.-- MCFF3 601-618 PHEMA.sub. -- CVBM 391-406 PENV.sub.-- MCFF 397-413 PENV.sub.-- MLVAV 630-647 PHEMA.sub.-- CVBQ 391-406 PENV.sub.-- MCFF3 397-413 PENV.sub.-- MLVCB 625-642 PHEMA.sub.-- CVHOC 391-406 PENV.sub.-- MLVAV 427-443 PENV.sub.-- MLVF5 639-656 PHEMA.sub.-- CVMA5 402-417 PENV.sub.-- MLVCB 422-438 PENV.sub.-- MLVFF 639-656 PHEMA.sub.-- CVMS 403-418 PENV.sub.-- MLVHO 423-439 PENV.sub.-- MLVFP 639-656 PHEMA.sub.-- INBAA 295-310 PENV.sub.-- MLVMO 426-442 PENV.sub.-- MLVHO 626-643 PHEMA.sub.-- INBBE 303-318 PENV.sub.-- MLVRD 424-440 PENV.sub.-- MLVKI 167-184 PHEMA.sub.-- INBBO 293-308 PENV.sub.-- MLVRK 424-440 PENV.sub.-- MLVMO 629-646 PHEMA.sub.-- INBEN 301-316 PENV.sub.-- MMTVB 618-633 PENV.sub.-- MLVRD 624-641 PHEMA.sub.-- INBFU 286-301 PENV.sub.-- MMTVG 618-633 PENV.sub.-- MLVRK 624-641 PHEMA.sub.-- INBGL 296-311 PENV.sub.-- SFV1 864-880 PENV.sub.-- MSVFB 170-187 PHEMA.sub.-- INBHK 293-308 PENV.sub.-- SFV3L 861-877 PENV.sub.-- RMCFV 603-620 PHEMA.sub.-- INBIB 288-303 PENV.sub.-- SIVGB 93-109 PENV.sub.-- SFV1 710-727 957-974 PHEMA.sub.-- INBID 299-314 PENV.sub.-- SIVMK 139-154 802-818 PENV.sub.-- SFV3L 707-724 954-971 PHEMA.sub. -- INBLE 302-317 PENV.sub.-- SIVML 139-154 801-817 PENV.sub.-- SIVM1 766-783 PHEMA.sub.-- INBMD 292-307 PENV.sub.-- SIVS4 806-822 PENV.sub.-- SIVMK 765-782 PHEMA.sub.-- INBME 296-311 PENV.sub.-- SIVSP 810-826 PENV.sub.-- SIVML 764-781 PHEMA.sub.-- INBNA 288-303 PHEMA.sub.-- CDVO 36-52 PENV.sub.-- SIVS4 769-786 PHEMA.sub.-- INBOR 301-316 PHEMA.sub.-- CVBLY 391-406 PENV.sub.-- SIVSP 773-790 PHEMA.sub.-- INBSI 301-316 PHEMA.sub.-- CVBM 391-406 PENV.sub.-- SMRVH 536-553 PHEMA.sub.-- INBSJ 296-313 PHEMA.sub.-- CVBQ 391-406 PENV.sub.-- SMSAV 42-59 PHEMA.sub.-- INBUS 294-309 PHEMA.sub.-- CVHOC 391-406 PHEMA.sub.-- CDVO 36-53 200-217 PHEMA.sub.-- INBVI 296-311 PHEMA.sub.-- CVMA5 402-417 PHEMA.sub.-- CVBLY 391-408 PHEMA.sub.-- INBVK 303-318 PHEMA.sub.-- CVMS 403-418 PHEMA.sub.-- CVBM 391-408 PHEMA.sub.-- INBYB 286-301 PHEMA.sub.-- IAAIC 237-253 PHEMA.sub.-- CVBQ 391-408 PHEMA.sub.-- MUMPM 133-148 PHEMA.sub.-- IABAN 221-237 PHEMA.sub.-- CVHOC 391-408 PHEMA.sub.-- MUMPR 133-148 PHEMA.sub.-- IABUD 234-250 PHEMA.sub.-- IAAIC 322-339 PHEMA.sub.-- MUMPS 133-148 PHEMA.sub.-- IACKA 234-250 PHEMA.sub.-- IABAN 306-323 PHEMA.sub.-- PI1HW 345-360 PHEMA.sub.-- IACKG 231-247 PHEMA.sub.-- IABUD 320-337 PHEMA.sub.-- PI2H 65-80 PHEMA.sub.-- IACKV 230-246 PHEMA.sub.-- IACKA 320-337 PHEMA.sub.-- PI2HT 65-80 PHEMA.sub.-- IADA1 234-250 PHEMA.sub.-- IACKG 316-333 PHEMA.sub.-- RINDK 368-383 PHEMA.sub.-- IADA3 237-253 PHEMA.sub.-- IACKP 302-319 PHEMA.sub.-- SV5 7-94 PHEMA.sub.-- IADCZ 234-250 PHEMA.sub.-- IACKQ 302-319 PHEMA.sub.-- SV5CM 7-94 PHEMA.sub.-- IADH1 221-237 PHEMA.sub.-- IACKS 319-336 PHEMA.sub.-- SV5CP 7-94 PHEMA.sub.-- IADH2 221-237 PHEMA.sub.-- IACKV 315-332 PHEMA.sub.-- SV5LN 7-94 PHEMA.sub.-- IADH3 221-237 PHEMA.sub.-- IADA1 320-337 PVENV.sub.-- DHVI1 42-57 PHEMA.sub.-- IADH4 221-237 PHEMA.sub.-- IADA3 322-339 PVFP7.sub.-- CAPVK 89-104 PHEMA.sub.-- IADH5 221-237 PHEMA.sub.-- IADCZ 320-337 PVFUS.sub.-- VACC6 72-87 PHEMA.sub.-- IADH6 221-237 PHEMA.sub.-- IADH1 306-323 PVGO1.sub.-- BPP22 242-257 PHEMA.sub.-- IADH7 221-237 PHEMA.sub.-- IADH2 306-323 PVGO1.sub.-- HSVEB 169-184 PHEMA.sub.-- IADM2 237-253 PHEMA.sub.-- IADH3 306-323 PVGO1.sub.-- HSVI1 210-225 317-332 PHEMA.sub.-- IADNZ 234-250 PHEMA.sub.-- IADH4 306-323 PVGO6.sub.- - BFT4 184-199 PHEMA.sub.-- IAEN6 221-237 PHEMA.sub.-- IADH6 306-323 PVGO7.sub.-- BPT4 885-900 PHEMA.sub.-- IAEN7 237-253 PHEMA.sub.-- IADH7 306-323 PVGO8.sub.-- HSVI1 134-149 PHEMA.sub.-- IAFPR 230-246 PHEMA.sub.-- IADM2 322-339 PVG10.sub.-- BPPH2 183-198 PHEMA.sub.-- IAHAL 236-252 PHEMA.sub.-- IADNZ 320-337 PVG10.sub.-- BPPZA 183-198 PHEMA.sub.-- IAHAR 235-251 PHEMA.sub.-- IADU3 322-339 PVG10.sub.-- HSVSA 109-124 PHEMA.sub.-- IAHC6 230-246 PHEMA.sub.-- IAEN6 306-323 PVG16.sub.-- BPP1 81-96 PHEMA.sub.-- IAHC7 230-246 PHEMA.sub.-- IAEN7 322-339 PVG18.sub.-- BPT4 468-483 PHEMA.sub.-- IAHCD 230-246 PHEMA.sub.-- IAFPR 315-332 PVG25.sub.-- BPT4 97-112 PHEMA.sub.-- IAHDE 230-246 PHEMA.sub.-- IAGRE 320-337 PVG29.sub.-- HSVI1 20-35 PHEMA.sub.-- IAHFO 236-252 PHEMA.sub.-- IAGU2 320-337 PVG30.sub.-- BPPH8 11-94 PHEMA.sub.-- IAHK6 236-252 PHEMA.sub.-- IAGUA 319-336 PVG36.sub.-- BPOX2 22-37 PHEMA.sub.-- IAHK7 236-252 PHEMA.sub.-- IAHAL 321-338 PVG36.sub.-- HSVSA 108-123 PHEMA.sub.-- IAHLE 230-246 PHEMA.sub.-- IAHC6 315-332 PVG37.sub.-- BPT2 1253-1268 PHEMA.sub.-- IAHLO 230-246 PHEMA.sub.-- IAHC7 315-332 PVG37.sub.-- HSVI1 284-299 PHEMA.sub.-- IAHMI 236-252 PHEMA.sub.-- IAHCD 315-332 PVG55.sub.-- HSVI1 22-37 143-158 PHEMA.sub.-- IAHNM 236-252 PHEMA.sub.-- IAHDE 315-332 PVG56.sub.-- HSVI1 268-283 PHEMA.sub.-- IAHRO 236-252 PHEMA.sub.-- IAHFO 321-338 PVG56.sub.-- HSVI1 102-117 PHEMA.sub.-- IAHSA 236-252 PHEMA.sub.-- IAHK6 321-338 PVG59.sub.-- HSVI1 267-282 PHEMA.sub.-- IAHSP 230-246 PHEMA.sub.-- IAHK7 321-338 PVG65.sub.-- HSVI1 518-533 PHEMA.sub.-- IAHSW 230-246 PHEMA.sub.-- IAHLE 315-332 PVG9.sub.-- BPPH2 234-249 PHEMA.sub.-- IAHTE 236-252 PHEMA.sub.-- IAHLO 315-332 PVG9.sub.-- BPPZA 234-249 PHEMA.sub.-- IAHTO 236-252 PHEMA.sub.-- IAHMI 321-338 PVG9.sub.-- SPV1R 57-72 PHEMA.sub.-- IAHUR 236-252 PHEMA.sub.-- IAHNM 321-338 PVGF.sub.-- BPPHX 234-249 PHEMA.sub.-- IAKIE 235-251 PHEMA.sub.-- IAHNN 315-332 PVGL2.sub.-- CVBF 264-279 PHEMA.sub.-- IALEN 235-251 PHEMA.sub.-- IAHPR 315-332 PVGL2.sub.-- CFBL9 264-279 PHEMA.sub.-- IAMAA 233-249 PHEMA.sub.-- IAHRO 321-338 PVGL2.sub.-- CVBLY 264-279 PHEMA.sub.-- IAMAB 238-254 PHEMA.sub.-- IAHSA 321-338 PVGL2.sub.-- CVBM 264-279 PHEMA.sub.-- IAMAO 237-253 PHEMA.sub.-- IAHSP 315-332 PVGL2.sub.-- CVBQ 264-279 PHEMA.sub.-- IAME1 237-253 PHEMA.sub.-- IAHSW 315-332 PVGL2.sub.-- CVBV 264-279 PHEMA.sub.-- IAME2 237-253 PHEMA.sub.-- IAHTE 321-338 PVGL2.sub.-- CVPFS 442-457 PHEMA.sub.-- IAME6 221-237 PHEMA.sub.-- IAHTO 321-338 PVGL2.sub.-- CVPPU 440-455 504-519 PHEMA.sub.-- IAMIN 85-101 231-247 PHEMA.sub.-- IAHUR 321-338 PVGL2.sub.-- CVPR8 218-233 PHEMA.sub.-- IANT6 237-253 PHEMA.sub.-- IAJAP 317-334 PVGL2.sub.-- CVPRM 218-233 PHEMA.sub.-- IAQU7 221-237 PHEMA.sub.-- IAMAA 319-336 PVGL2.sub.-- IBV6 1056-1071 PHEMA.sub.-- IARUD 234-250 PHEMA.sub.-- IAMAB 324-341 PVGL2.sub.-- IBVB 1055-1070 PHEMA.sub.-- IASE2 234-250 PHEMA.sub.-- IAMAO 322-339 PVGL2.sub.-- IBVD2 1056-1071 PHEMA.sub.-- IASH2 234-250 PHEMA.sub.-- IAME1 322-339 PVGL2.sub.-- IBVK 1055-1070 PHEMA.sub.-- IASTA 230-246 PHEMA.sub.-- IAME2 322-339 PVGL2.sub.-- IBVM 1055-1070 PHEMA.sub.-- IATAI 235-251 PHEMA.sub.-- IAME6 306-323 PVGLB.sub.-- HSVSA 701-716 PHEMA.sub.-- IATKM 234-250 PHEMA.sub.-- IAMIN 316-333 PVGLB.sub.-- PRVIF 203-216 PHEMA.sub.-- IATKO 233-249 PHEMA.sub.-- IANT6 322-339 PVGLC.sub.-- HSVBC 475-490 PHEMA.sub.-- IATKR 230-246 PHEMA.sub.-- IAPIL 320-337 PVGLC.sub.-- HSVE4 444-459 PHEMA.sub.-- IATKW 229-245 PHEMA.sub.-- IAQU7 306-323 PVGLC.sub.-- HSVEB 427-442 PHEMA.sub.-- IAUDO 237-253 PHEMA.sub.-- IARUD 320-337 PVGLC.sub.-- PRVIF 446-461 PHEMA.sub.-- IAUSS 235-251 PHEMA.sub.-- IASE2 320-337 PVGLD.sub.-- HSV11 79-94 PHEMA.sub.-- IAVI7 238-254 PHEMA.sub.-- IASH2 321-338 PVGLD.sub.-- HSV2 79-94 PHEMA.sub.-- IAXIA 235-251 PHEMA.sub.-- IASTA 315-332 PVGLF.sub.-- BRSVA 265-280 PHEMA.sub.-- IAZCO 237-253 PHEMA.sub.-- IATKM 320-337 PVGLF.sub.-- BRSVC 265-280 PHEMA.sub.-- IAZH2 221-237 PHEMA.sub.-- IAUDO 322-339 380-397 PVGLF.sub.-- BRSVR 265-280 PHEMA.sub.-- IAZH3 221-237 PHEMA.sub.-- IAVI7 323-340 PVGLF.sub.- - HRSV1 265-280 PHEMA.sub.-- IAZUK 237-253 PHEMA.sub.-- IAZCO 322-339 PVGLF.sub.-- HRSVA 265-280 PHEMA.sub.-- INBAA 115-131 295-310 PHEMA.sub.-- IAZH2 306-323 PVGLF.sub.- - HRSVL 265-280 PHEMA.sub.-- INBBE 123-139 303-318 PHEMA.sub.-- IAZH3 306-323 PVGLF.sub.-- HRSVR 265-280 PHEMA.sub.-- INBBO 116-132 293-308 PHEMA.sub.-- IAZUK 322-339 PVGLF.sub.- - MUMPS 5-94 PHEMA.sub.-- INBEN 123-139 301-316 PHEMA.sub.-- MUMPM 101-118 PVGLI.sub.-- VZVD 278-293 PHEMA.sub.-- INBFU 108-124 286-301 PHEMA.sub.-- MUMPR 101-118 PVGLM.sub.- - HANTB 900-915 PHEMA.sub.-- INBGL 119-135 296-311 PHEMA.sub.-- MPMPS 101-118 PVGLM.sub.-- PTPV 743-758 PHEMA.sub.-- INBHK 116-132 293-308 PHEMA.sub.-- NDVA 93-110 PVGLM.sub.- - SEOUR 901-916 PHEMA.sub.-- INBIB 108-124 288-303 PHEMA.sub.-- NDVB 93-110 PVGLM.sub.-- SEOUS 900-915 PHEMA.sub.-- INBID 120-136 299-314 PHEMA.sub.-- NDVD 93-110 PVGLY.sub.- - LASSG 426-441 PHEMA.sub.-- INBLE 123-139 302-317 PHEMA.sub.-- NDVH 93-110 PVGLY.sub.-- LASSJ 427-442 PHEMA.sub.-- INBMD 113-129 292-307 PHEMA.sub.-- NDVI 93-110 PVGLY.sub.- - MOPEI 425-440 PHEMA.sub.-- INBME 116-132 296-311 PHEMA.sub.-- NDVM 93-110 PVM3.sub.-- REOVD 521-536 PHEMA.sub.-- INBNA 108-124 288-303 PHEMA.sub.-- NDVQ 93-110 PVMSA.sub.- - HPBGS 380-395 PHEMA.sub.-- INBOR 123-139 301-316 PHEMA.sub.-- NDVTG 93-110 PVMSA.sub.-- HPBV9 187-202 PHEMA.sub.-- INBSI 123-139 301-316 PHEMA.sub.-- NDVU 93-110 PVMSA.sub.- - WHV1 378-393 PHEMA.sub.-- INBSJ 119-135 298-313 PHEMA.sub.-- PHODV 36-53 PVMSA.sub.-- WHV59 383-398 PHEMA.sub.-- INBUS 116-132 294-309 PHEMA.sub.-- PI1HW 486-503 PVMSA.sub.- - WHV7 383-398 PHEMA.sub.-- INBVI 116-132 296-311 PHEMA.sub.-- PI3B 111-128 PVMSA.sub.-- WHV8 383-398 PHEMA.sub.-- INBVK 123-139 303-318 PHEMA.sub.-- PI3H4 111-128 PVMSA.sub.- - WHV8I 383-398 PHEMA.sub.-- INBYB 108-124 286-301 PHEMA.sub.-- PI3HA 111-128 PVMSA.sub.-- WHVW6 234-249 PHEMA.sub.-- MUMPM 133-148 PHEMA.sub.-- PI3HT 111-128 PVMT2.sub.-- IAANN 25-40 PHEMA.sub.-- MUMPR 133-148 PHEMA.sub.-- PI3HU 111-128 PVMT2.sub.-- IABAN 25-40 PHEMA.sub.-- MUMPS 133-148 PHEMA.sub.-- PI3HV 111-128 PVMT2.sub.-- IAFOW 25-40 PHEMA.sub.-- PI1HW 345-360 PHEMA.sub.-- PI3HW 111-128 PVMT2.sub.-- IAFPR 25-40 PHEMA.sub.-- FI2H 65-81 PHEMA.sub.-- PI3HX 111-128 PVMT2.sub.-- IAFPW 25-40 PHEMA.sub.-- PI2HT 65-81 PHEMA.sub.-- PI4HA 50-67 PVMT2.sub.-- IALE1 25-40 PHEMA.sub.-- PI3B 324-340 PHEMA.sub.-- SV41 85-102 PVMT2.sub.-- IALE2 25-40 PHEMA.sub.-- PI3H4 324-340 PHEMA.sub.-- SV5 84-101 PVMT2.sub.-- IAMAN 25-40 PHEMA.sub.-- PI3HA 324-340 PHEMA.sub.-- SV5CM 84-101 PVMT2.sub.-- IAPUE 25-40 PHEMA.sub.-- PI3HT 324-340 PHEMA.sub.-- SV5CP 84-101 PVMT2.sub.-- IASIN 25-40 PHEMA.sub.-- PI3HU 324-340 PHEMA.sub.-- SV5LN 84-101 PVMT2.sub.-- IAUDO 25-40 PHEMA.sub.-- PI3HV 324-340 PVFO5.sub.-- VACCC 280-297 PVMT2.sub.-- IAWIL 25-40 PHEMA.sub.-- PI3HW 324-340 PVFO5.sub.-- VACCP 280-297 PVMT9.sub.-- MYXVL 226-241 PHEMA.sub.-- PI3HX 324-340 PVFO5.sub.-- VACCV 281-298 PHEMA.sub.-- RINDK 368-383 PVFO9.sub.-- VACCC 176-193 PHEMA.sub.-- SV5 7-94 PVFO9.sub.-- VACCV 176-193 PHEMA.sub.-- SV5CM 7-94 PVG27.sub.-- HSVSA 209-226 PHEMA.sub.-- SV5CP 7-94 PVG28.sub.-- HSVI1 173-190 PHEMA.sub.-- SV5LN 7-94 PVG39.sub.-- HSVI1 648-665 PVENV.sub.-- DHVI1 42-57 PVG43.sub.-- HSVI1 109-126 521-538 PVENV.sub.-- EAV 25-41 PVG67.sub.-- HSVI1 171-188 PVFP2.sub.-- FOWPV 88-104 PVG72.sub.-- HSVI1 1252-1269 PVFP7.sub.-- CAPVK 89-104 PVGF1.sub.-- IBVB 3073-3090 PVFUS.sub.-- VACC6 72-87 PVGL2.sub.-- IBV6 1094-1111 PVGO1.sub.-- HSVEB 169-184 PVGLB.sub.-- HSVE1 736-753 PVGO1.sub.-- HSVI1 209-225 317-332 PVGLB.sub.-- HSVE4 675-692 PVGO8.sub.-- HSVI1 134-149 PVGLB.sub.-- HSVEA 736-753 PVG10.sub.-- HSVSA 109-124 PVGLB.sub.-- HSVEB 736-753 PVG11.sub.-- HSVI1 103-119 PVGLB.sub.-- HSVEL 736-753 PVG12.sub.-- HSVI1 270-286 PVGLB.sub.-- ILTV6 597-614 PVG1.sub.-- SPV1R 76-92 PVGLB.sub.-- ILTV5 607-624 PVG29.sub. -- HSVI1 20-35 PVGLB.sub.-- ILTVT 607-624 PVG86.sub.-- BPOX2 22-37 PVGLC.sub.-- PRVIF 180-197 PVG36.sub.- - HSVSA 108-123 PVGLE.sub.-- VZVD 469-486 PVG37.sub.-- HSVI1 284-299 PVGLF.sub.-- SV5 401-418 PVG41.sub.-- HSVI1 244-260 PVGLH.sub.-- HCMVA 365-382 PVG46.sub.-- HSVI1 1244-1260 PVGLH.sub.-- HCMVT 364-381 PVG55.sub.-- HSVI1 22-37 143-158 PVGLH.sub.-- HSV11 245-262 803-820 PVG56.sub.-- HSVI1 268-283 PVGLH.sub.-- HSV1E 245-262 803-820 PVG58.sub.-- HSVI1 101-117 PVGLI.sub.-- HSV11 43-60 PVG58.sub.-- HSVSA 130-146 330-346 PVGLM.sub.-- BUNL7 81-98 PVG59.sub.-- HSVI1 267-282 PVGLM.sub.-- BUNSH 81-98 PVG65.sub.-- HSVI1 362-378 518-533 PVGLM.sub.-- PUUMH 712-729 PVG71.sub.-- HSVSA 89-105 PVGLM.sub.-- PUUMS 712-729 PVG9.sub.-- BPPH2 234-249 PVGLM.sub.-- RVFV 344-361 PVG9.sub.-- BPPZA 234-249 PVGLM.sub.-- RVFVZ 344-361 PVG9.sub.-- SPV1R 57-72 PVGLY.sub.-- LASSG 12-94 PVGF1.sub.-- IBVB 2210-2226 PVGLY.sub.-- LASSJ 12-94 PVGL2.sub.-- CVBF 123-139 174-190 264-279 PVGLY.sub.-- LYCVA 12-94 PVGL2.sub.-- CVBL9 123-139 174-190 264-279 PVGLY.sub.-- LYCVW 12-94 PVGL2.sub.-- CVBLY 123-139 174-190 264-279 PVGLY.sub.-- MOPEI 12-94 PVGL2.sub.-- CVBM 123-139 174-190 264-279 PVM1.sub.-- REOVD 280-297 PVGL2.sub.-- CVBQ 31-47 123-139 174-190 264-279 PVM1.sub.-- REOVL 280-297 PVGL2.sub.-- CVBV 123-139 174-190 264-279 PVMAT.sub.-- CDVO 148-165 PVGL2.sub.-- CVM4 95-111 1267-1283 PVMAT.sub.-- MEASI 87-104 PVGL2.sub.-- CVMA5 95-111 1216-1231 PVMP.sub.-- CAMVC 147-164 PVGL2.sub.-- CVMJH 95-111 1126-1142 PVMP.sub.-- CAMVD 147-164 PVGL2.sub.-- CVPFS 442-457 800-818 1274-1290 PVMP.sub.-- CAMVE 147-164 PVGL2.sub.-- CVPPU 440-455 504-519 798-814 1272-1288 PVMP.sub.-- CAMVN 147-164 PVGL2.sub.-- CVPR8 218-233 576-592 1050-1066 PVMP.sub.-- CAMVS 147-164 PVGL2.sub.-- CVPRM 218-233 576-592 1050-1066 PVMP.sub.-- CAMVW 147-164 PVGL2.sub.-- FIPV 803-819 1277-1293 PVMSA.sub.-- HPBVO 11-94 PVGL2.sub.-- IBV6 1056-1071 PVMSA.sub.-- HPBV2 185-202 PVGL2.sub.-- IBVB 1055-1070 PVMSA.sub.-- HPBV4 185-202 PVGL2.sub.-- IBVD2 1056-1071 PVMSA.sub.-- HPBVA 174-191 PVGL2.sub.-- IBVK 1055-1070 PVMSA.sub.-- HPBVD 11-94 PVGL2.sub.-- IBVM 1055-1070 PVMSA.sub.-- HPBVJ 174-191 PVGLB.sub.-- HSVSA 701-716 PVMSA.sub.-- HPBVL 174-191 PVGLB.sub.-- PRVIF 203-218 PVMSA.sub.-- HPBVN 11-94 PVGLB.sub.-- VZVD 522-538 PVMSA.sub.-- HPBVO 174-191 PVGLC.sub.-- HSVBC 475-490 PVMSA.sub.-- HPBVP 185-202 PVGLC.sub.-- HSVE4 444-459 PVMSA.sub.-- HPBVR 185-202 PVGLC.sub.-- HSVEB 427-442 PVMSA.sub.-- HPBVS 11-94 PVGLC.sub.-- PRVIF 446-461 PVMSA.sub.-- HPBVW 174-191 PVGLC.sub.-- VZVD 150-166 PVMSA.sub.-- HPBVY 174-191 PVGLC.sub.-- VZVS 150-166 PVMSA.sub.-- HPBVZ 174-191 PVGLD.sub.-- HSV11 79-94 PVMT2.sub.-- IAANN 25-42 PVGLD.sub.-- HSV2 79-94 PVMT2.sub.-- IABAN 25-42 PVGLE.sub.-- PRVRI 3-94 PVMT2.sub.-- IAFOW 25-42 PVGLF.sub.-- BRSVA 205-221 265-280 PVMT2.sub.-- IAFPR 25-42 PVGLF.sub.-- BRSVC 205-221 265-280 PVMT2.sub.-- IAFPW 25-42 PVGLF.sub.-- BRSVR 205-221 265-280 PVMT2.sub.-- IALE1 25-42 PVGLF.sub.-- COVO 398-414 PVMT2.sub.-- IALE2 25-42 PVGLF.sub.-- HRSV1 205-221 265-280 PVMT2.sub.-- IAMAN 25-42 PVGLF.sub.-- HRSVA 205-221 265-280 PVMT2.sub.-- IAPUE 25-42 PVGLF.sub.-- HRSVL 205-221 265-280 PVMT2.sub.-- IASIN 25-42 PVGLF.sub.-- HRSVR 205-221 265-280 PVMT2.sub.-- IAUDO 25-42 PVGLF.sub.-- MEASE 286-302 PVMT2.sub.-- IAWIL 25-42 PVGLF.sub.-- MEASI 289-305 PVGLF.sub.-- MEASY 286-302 PVGLF.sub.-- MUMPM 276-292 PVGLF.sub.-- MUMPR 276-292 PVGLF.sub.-- MUMPS 5-94 276-292 PVGLF.sub.-- NDVA 273-289 PVGLF.sub.-- NDVB 273-289 PVGLF.sub.-- NDVM 273-289 PVGLF.sub.-- NDVT 273-289 PVGLF.sub.-- NDVTG 273-289 PVGLF.sub.-- NDVU 273-289 PVGLF.sub.-- PHODV 269-285 367-383 PVGLF.sub.-- RINDK 282-298 PVGLF.sub.-- RINDL 282-298 PVGLF.sub.-- TRTV 175-191 PVGLI.sub.-- VZVD 278-293 PVGLM.sub.-- HANTB 355-371 900-915 PVGLM.sub.-- HANTH 499-515 PVGLM.sub.-- HANTL 499-515 PVGLM.sub.-- HANTV 499-515 PVGLM.sub.-- PTPV 743-758 PVGLM.sub.-- PUUMH 509-525 PVGLM.sub.-- PUUMS 509-525 PVGLM.sub.-- SEOUR 355-371 901-916 PVGLM.sub.-- SEOUS 355-371 900-915 PVGLM.sub.-- UUK 826-842 PVGLP.sub.-- BEV 869-885 PVGLY.sub.-- LASSG 12-94 426-441 PVGLY.sub.-- LASSJ 12-94 427-442 PVGLY.sub.-- LYCVA 12-94 PVGLY.sub.-- LYCVW 12-94 PVGLY.sub.-- MOPEI 12-94 425-440 PVGLY.sub.-- PIARV 12-94 PVGNM.sub.-- CPMV 1021-1037 PVM3.sub.-- REOVD 521-536 PVMAT.sub.-- MUMPS 191-207 PVMAT.sub.-- NDVA 135-151 PVMAT.sub.-- NDVB 135-151 PVMAT.sub.-- PI2HT 189-205 PVMAT.sub.-- SV41 189-205 PVMAT.sub.-- SV5 98-114 132-148 PVMP.sub.-- CAMVC 118-134 PVMP.sub.-- CAMVD 118-134 PVMP.sub.-- CAMVE 118-134 PVMP.sub.-- CAMVN 118-134 PVMP.sub.-- CAMVS 118-134 PVMP.sub.-- CAMVW 118-134 PVMP.sub.-- FMVD 115-131 PVMSA.sub.-- HPBGS 380-395 PVMSA.sub.-- HPBV9 187-202 PVMSA.sub.-- WHV1 378-393 PVMSA.sub.-- WHV59 383-398 PVMSA.sub.-- WHV7 383-398 PVMSA.sub.-- WHV8 383-398 PVMSA.sub.-- WHVSI 383-398 PVMSA.sub.-- WHVW6 234-249 PVMT2.sub.-- IAANN 25-40 PVMT2.sub.-- IABAN 25-40 PVMT2.sub.-- IAFOW 25-40 PVMT2.sub.-- IAFPR 25-40 PVMT2.sub.-- IAFPW 25-40 PVMT2.sub.-- IALE1 25-40 PVMT2.sub.-- IALE2 25-40 PVMT2.sub.-- IAMAN 25-40 PVMT2.sub.-- IAPUE 25-40 PVMT2.sub.-- IASIN 25-40 PVMT2.sub.-- IAUDO 25-40 PVMT2.sub.-- IAWIL 25-40 PVMT9.sub.-- MYXVL 226-241 - Search Results Summary for P3CTLZIP, P4CTLZIP, P5CTLZIP, and P6CTLZIP Motifs P3CTLZIP P4CTLZIP P5CTLZIP P6CTLZIP LIBRARY FILE LIBRARY FILE LIBRARY FILE LIBRARY FILE PENV.sub.-- BIV27 147-165 PENV1.sub.-- FRSFV 380-399 PENV1.sub.-- FRSFV 380-400 PENV.sub.-- BIVO6 47-68 525-546 PENV.sub.-- CAEVC 810-828 PENV.sub.-- AVISU 98-117 PENV2.sub.-- FRSFV 380-400 PENV.sub.-- BIV27 47-68 147-168 564-575 PENV.sub.-- CAEVG 808-826 PENV.sub.-- BIV27 147-166 PENV.sub.-- BAEVM 170-190 PENV.sub.-- FENV1 225-246 630-651 PENV.sub.-- HV2BE 750-768 PENV.sub.-- HV1ZH 123-142 PENV.sub.-- FIVPE 781-801 PENV.sub.-- FLVC6 624-645 PENV.sub.-- HV2D1 741-759 PENV.sub.-- HV2D2 9-29 PENV.sub.-- FIVSD 779-799 PENV.sub.-- FLVGL 447-468 605-626 PENV.sub.-- HV2G1 741-759 PENV.sub.-- HV2SB 778-797 PENV.sub.-- FIVT2 780-800 PENV.sub.-- FLVLB 467-488 625-646 PENV.sub.-- HV2NZ 742-760 PENV.sub.-- JSRV 541-560 PENV.sub.-- FLVGL 9-29 PENV.sub.-- FLVSA 444-465 602-623 PENV.sub.-- HV2RO 751-769 PENV.sub.-- RSVP 533-552 PENV.sub.-- FOAMV 255-275 924-944 PENV.sub.-- FOAMV 153-174 957-978 PENV.sub.-- HV2SB 743-761 PHEMA.sub.-- VACCC 173-192 PENV.sub.-- FSVGA 9-29 PENV.sub.-- FSVGA 467-488 625-646 PENV.sub.-- HV2ST 745-763 PHEMA.sub.-- VACCI 173-192 PENV.sub.-- HV1C4 428-448 PENV.sub.-- FSVGB 447-468 605-626 PENV.sub.-- JSRV 376-394 PHEMA.sub.-- VACCT 173-192 PENV.sub.-- HV2CA 750-770 PENV.sub.-- FSVSM 450-471 608-629 PHEMA.sub.-- PI2H 118-136 PHEMA.sub.-- VACCV 173-192 PENV.sub.-- MLVF5 400-420 PENV.sub.-- FSVST 467-488 PHEMA.sub.-- PI2HT 118-136 PVENV.sub.-- BEV 62-81 PENV.sub.-- MMTVB 643-663 PENV.sub.-- GALV 52-73 519-540 PHEMA.sub.-- SV41 55-73 PVENV.sub.-- MCV1 61-80 PENV.sub.-- MMTVG 643-663 PENV.sub.-- HV2BE 750-771 PVENV.sub.-- THOGV 473-491 PVENV.sub.-- MCV2 61-80 PENV.sub.-- OMVVS 75-95 PENV.sub.-- HV2G1 741-762 PVG16.sub.-- BPP22 83-101 PVFUS.sub.-- ORFNZ 29-48 PENV.sub.-- RSVP 42-62 PENV.sub.-- HV2NZ 742-763 PVG24.sub.-- BPT4 115-133 PVGO1.sub.-- HSVEB 169-188 PENV.sub.-- SFV1 924-944 PENV.sub.-- HV2RO 751-772 PVG36.sub. -- HSVSA 344-362 PVGO1.sub.-- VACCC 376-395 PENV.sub.-- SFV3L 921-941 PENV.sub.-- HV2ST 745-766 PVG40.sub.-- HSVI1 14-32 PVGO1.sub.-- VACCV 315-334 PENV.sub.-- SIVM1 766-786 PENV.sub.-- MCFF 600-621 PVG50.sub. -- HSVSA 5-94 PVGO1.sub.-- VARV 376-395 PENV.sub.-- SIVMK 765-785 PENV.sub.-- MCFF3 601-622 PVG51.sub. -- BPT4 63-81 PVGO6.sub.-- BPT4 627-646 PENV.sub.-- SIVML 764-784 PENV.sub.-- MLVAV 630-651 PVG51.sub. -- HSVI1 84-102 PVG10.sub.-- HSVI1 35-54 PENV.sub.-- SIVS4 769-789 PENV.sub.-- MLVCB 625-646 PVG65.sub. -- HSVI1 155-173 PVG11.sub.-- HSVI1 103-122 150-169 PENV.sub.-- SIVSP 773-793 PENV.sub.-- MLVF5 639-660 PVGF1.sub.-- IBVB 2788-2806 3374-3392 PVG1.sub.-- BPPH2 31-50 PHEMA.sub.-- CDVO 493-513 PENV.sub.-- MLVFF 639-660 PVGL2.sub. -- CVH22 1053-1071 PVG1.sub.-- SPV1R 659-678 PHEMA.sub.-- CVBLY 391-411 PENV.sub.-- MLVFP 639-660 PVGL2.sub.-- IBV6 1056-1074 PVG20.sub.-- BPT4 231-250 PHEMA.sub.-- CVBM 391-411 PENV.sub.-- MLVHO 626-647 PVGL2.sub. -- IBVB 1055-1073 PVG32.sub.-- VZVD 90-109 PHEMA.sub.-- CVBQ 391-411 PENV.sub.-- MLVKI 167-188 PVGL2.sub.-- IBVD2 1056-1074 PVG36.sub.-- BPK3 132-151 PHEMA.sub.-- CVHOC 391-411 PENV.sub.-- MLVMO 629-650 PVGL2.sub.-- IBVK 1055-1073 PVG37.sub.-- BPT2 19-38 629-648 PHEMA.sub.-- CVMA5 402-422 PENV.sub.-- MLVRD 624-645 PVGL2.sub.-- IBVM 1055-1073 PVG37.sub.-- BPT4 19-38 625-644 PHEMA.sub.-- IACKG 81-101 PENV.sub.-- MLVRK 624-645 PVGLB.sub. -- HSVB1 560-578 689-707 PVG39.sub.-- HSVI1 1038-1057 PHEMA.sub.-- IADMA 81-101 PENV.sub.-- MSVFB 170-191 PVGLB.sub.-- HSVBC 692-710 PVG41.sub.-- HSVI1 62-81 PHEMA.sub.-- MUMPM 397-417 PENV.sub.-- RMCFV 603-624 PVGLB.sub.-- HSVSA 584-602 PVG43.sub.-- BPPF3 380-399 PHEMA.sub.-- MUMPR 397-417 PENV.sub.-- SFV1 957-978 PVGLB.sub. -- ILTV6 740-758 PVG46.sub.-- BPPF1 337-356 PHEMA.sub.-- MUMPS 397-417 PENV.sub.-- SFV3L 157-178 954-975 PVGLB.sub.-- ILTVS 750-768 PVG59.sub.-- HSVI1 142-161 PHEMA.sub.-- PHODV 493-513 PENV.sub.-- SIVA1 437-458 PVGLB.sub. -- ILTVT 750-768 PVG61.sub.-- HSVI1 117-136 PHEMA.sub.-- PI1HW 322-342 PENV.sub.-- SIVAG 442-463 PVGLC.sub.-- VZVD 431-449 PVG67.sub.-- HSVI1 318-337 1072-1091 PHEMA.sub.-- PI2H 13-33 PENV.sub.-- SIVAI 421-442 PVGLC.sub. -- VZVS 431-449 PVGF1.sub.-- IBVB 1587-1606 2108-2127 PHEMA.sub.-- PI2HT 13-33 PENV.sub.-- SIVAT 435-456 PVGLF.sub.-- PI3H4 2-94 PVGL2.sub.-- CVBF 991-1010 PHEMA.sub.-- RINDL 497-517 PENV.sub.-- SMSAV 42-63 PVGLH.sub.-- HSV6G 314-332 PVGL2.sub.-- CVBL9 991-1010 PHEMA.sub.-- SEND5 322-342 PHEMA.sub.-- CVMA5 402-423 PVGLH.sub.- - HSVE4 814-832 PVGL2.sub.-- CVBLY 991-1010 PHEMA.sub.-- SENDF 322-342 PHEMA.sub.-- IADE1 266-287 PVGLH.sub.-- HSVEB 807-825 PVGL2.sub.-- CVBM 991-1010 PHEMA.sub.-- SENDH 322-342 PHEMA.sub.-- MUMPM 225-246 PVGLI.sub.- - HSV11 5-94 PVGL2.sub.-- CVBQ 991-1010 PHEMA.sub.-- SENDJ 322-342 PHEMA.sub.-- MUMPR 225-246 PVGNM.sub.- - BPMV 678-696 PVGL2.sub.-- CVBV 991-1010 PHEMA.sub.-- SENDZ 322-342 PHEMA.sub.-- MUMPS 225-246 PVMO1.sub.-- VACCC 134-152 177-195 PVGL2.sub.-- CVH22 768-787 1115-1134 PVENV.sub.-- LELV 27-47 148-168 PHEMA.sub.-- PHODV 213-234 PVMO1.sub.-- VACCV 83-101 126-144 PVGL2.sub.-- CVM4 999-1018 PVENV.sub.-- THOGV 356-376 PHEMA.sub.-- PI2H 13-34 PVM1.sub.-- REOVD 227-245 PVGL2.sub.-- CVMA5 947-966 PVGO1.sub.-- VACCC 298-318 PHEMA.sub.-- PI2HT 13-34 PVM1.sub.-- REOVL 227-245 PVGL2.sub.-- CVMJH 858-877 PVGO1.sub.-- VACCV 237-257 PHEMA.sub.-- SV5 7-28 379-400 PVMAT.sub.-- HRSVA 44-62 PVGL2.sub.-- CVPFS 64-83 1038-1057 PVGO1.sub.-- VARV 298-318 PHEMA.sub.-- SV5CM 7-28 379-400 PVMAT.sub.-- NDVA 190-208 PVGL2.sub.-- CVPPU 64-83 1036-1055 PVGO6.sub.-- VACCC 31-51 PHEMA.sub.-- SV5CP 7-28 379-400 PVMAT.sub.-- NDVB 190-208 PVGL2.sub.-- CVPR8 814-833 PVGO6.sub.-- VARV 31-51 PHEMA.sub.-- SV5LN 7-28 379-400 PVMP.sub.-- CAMVC 183-201 PVGL2.sub.-- CVPRM 814-833 PVGO9.sub.-- BPPF1 25-45 PVGO1.sub.-- HSVEB 169-190 PVMP.sub.-- CAMVD 183-201 PVGL2.sub.-- FIPV 1041-1060 PVG12.sub.-- HSVI1 151-171 PVGO1.sub.-- HSVI1 589-610 PVMP.sub.-- CAMVE 183-201 PVGL2.sub.-- IBV6 588-607 771-790 PVG22.sub.-- HSVI1 300-320 PVG23.sub.-- HSVI1 314-335 PVMP.sub.-- CAMVN 183-201 PVGL2.sub.-- IBVB 587-606 770-789 PVG39.sub.-- HSVI1 648-668 970-990 PVG37.sub.-- BPOX2 65-86 PVMP.sub.-- CAMVS 183-201 PVGL2.sub.-- IBVD2 588-607 771-790 PVG51.sub.-- HSVI1 29-49 PVG43.sub.-- HSVI1 157-178 PVMP.sub.-- CAMVW 183-201 PVGL2.sub.-- IBVK 587-606 770-789 PVG63.sub.-- HSVI1 336-356 PVG55.sub.-- HSVI1 288-309 PVMP.sub.-- FMVD 180-198 PVGL2.sub.-- IBVM 587-606 770-789 PVG65.sub.-- HSVI1 117-137 PVG55.sub.-- HSVSA 85-106 PVGLB.sub.-- HCMVA 706-725 PVG74.sub.-- HSVSA 124-144 PVG56.sub.-- HSVI1 1155-1176 PVGLB.sub.-- HCMVT 707-726 PVGL2.sub.-- IBV6 328-348 PVG58.sub.-- HSVSA 266-287 PVGLB.sub.-- HSV6U 117-136 PVGL2.sub.-- IBVB 327-347 PVG60.sub.-- HSVI1 30-51 PVGLB.sub.-- ILTV6 256-275 PVGL2.sub.-- IBVD2 328-348 PVG83.sub.-- HSVI1 238-259 PVGLB.sub.-- ILTVS 266-285 PVGL2.sub.-- IBVD3 328-348 PVGF1.sub.-- IBVB 1856-1877 PVGLB.sub.-- ILTVT 266-285 PVGL2.sub.-- IBVK 327-347 PVGH3.sub.-- HCMVA 157-178 PVGLC.sub.-- HSV11 3-94 467-486 PVGL2.sub.-- IBVM 327-347 378-398 PVGL2.sub.-- CVBF 1259-1280 PVGLC.sub.-- HSV1K 3-94 467-486 PVGL2.sub.-- IBVU2 310-330 PVGL2.sub.-- CVBL9 1259-1280 PVGLC.sub.-- HSVBC 475-494 PVGLB.sub.-- EBV 732-752 PVGL2.sub.-- CVBLY 1259-1280 PVGLG.sub.-- CHAV 436-455 PVGLB.sub.-- HCMVA 750-770 PVGL2.sub.-- CVBM 1259-1280 PVGLG.sub.-- RABVH 372-391 PVGLB.sub.-- HCMVT 751-771 PVGL2.sub.-- CVBQ 1259-1280 PVGLI.sub.-- HSVEB 44-63 PVGLB.sub.-- HSV23 79-99 PVGL2.sub.-- CVBV 1259-1280 PVGLI.sub.-- VZVD 278-297 PVGLB.sub.-- HSV2H 79-99 PVGL2.sub.-- CVM4 1317-1338 PVGLM.sub.-- BUNGE 117-136 PVGLB.sub.-- HSV2S 65-85 PVGL2.sub.-- CVMA5 1265-1286 PVGLM.sub.-- PHV 152-171 PVGLB.sub.-- HSV6U 72-92 PVGL2.sub.-- CVMJH 1176-1197 PVGLM.sub.-- PTPV 997-1016 PVGLB.sub.-- HSVB2 279-299 PVGLB.sub.-- HSV11 83-104 PVGLM.sub.-- PUUMH 155-174 PVGLB.sub.-- HSVSA 63-83 PVGLB.sub.-- HSV1F 82-103 PVGLM.sub.-- PUUMS 155-174 PVGLB.sub.-- MCMVS 738-758 PVGLB.sub.-- HSV1K 82-103 PVGLM.sub.-- RVFV 830-849 PVGLF.sub.-- PI3H4 283-303 PVGLB.sub.-- HSV1P 83-104 PVGLM.sub.-- RVFVZ 830-849 PVGLG.sub.-- RABVE 454-474 PVGLB.sub.-- MCMVS 135-156 PVGLM.sub.-- UUK 655-674 PVGLG.sub.-- RABVH 454-474 PVGLC.sub.-- PRVIF 446-467 PVGLY.sub.-- LYCVW 89-108 PVGLG.sub.-- RABVP 454-474 PVGLF.sub.-- CDVO 336-357 PVGNB.sub.-- CPMV 1165-1184 PVGLG.sub.-- RABVS 454-474 PVGLF.sub.-- MEASE 224-245 PVM3.sub.-- REOVD 521-540 PVGLG.sub.-- RABVT 454-474 PVGLF.sub.-- MEASI 227-248 PVME1.sub.-- CVBM 171-190 PVGLH.sub.-- MCMVS 670-690 PVGLF.sub.-- MEASY 224-245 PVME1.sub.-- CVH22 136-155 PVGLM.sub.-- BUNL7 1325-1345 PVGLF.sub.-- MUMPM 446-467 PVME1.sub.-- CVPFS 174-193 PVGLM.sub.-- BUNSH 1325-1345 PVGLF.sub.-- MUMPR 446-467 PVME1.sub.-- CVPPU 174-193 PVGLM.sub.-- BUNYW 996-1016 PVGLF.sub.-- MUMPS 446-467 PVME1.sub.-- CVPRM 174-193 PVGLM.sub.-- HANTB 999-1019 PVGLF.sub.-- PHODV 305-326 PVME1.sub.-- CVTKE 171-190 PVGLM.sub.-- HANTH 1000-1020 PVGLF.sub.-- PI1HC 456-477 PVGLM.sub.-- HANTL 1001-1021 PVGLF.sub.-- PI2H 450-471 PVGLM.sub.-- HANTV 1001-1021 PVGLF.sub.-- PI2HG 450-471 PVGLM.sub.-- RVFVZ 1156-1176 PVGLF.sub.-- PI2HT 450-471 PVGLM.sub.-- SEOUR 1000-1020 PVGLF.sub.-- PI3B 405-426 453-474 PVGLM.sub.-- SEOUS 999-1019 PVGLF.sub.-- PI3H4 453-474 PVGLM.sub.-- UUK 925-945 PVGLF.sub.-- RINDK 220-241 PVGLY.sub.-- LYCVA 12-32 PVGLF.sub.-- RINDL 220-241 PVGLY.sub.-- LYCVW 12-32 PVGLF.sub.-- SEND5 460-481 PVGLY.sub.-- PIARV 12-32 PVGLF.sub.-- SENDF 460-481 PVGNB.sub.-- CPMV 141-161 PVGLF.sub.-- SENDH 460-481 PVMAT.sub.-- MUMPS 310-330 PVGLF.sub.-- SENDJ 460-481 PVMAT.sub.-- NDVA 309-329 PVGLF.sub.-- SENDZ 460-481 PVMAT.sub.-- NDVB 309-329 PVGLF.sub.-- SV41 453-474 PVMAT.sub.-- PI2HT 308-328 PVGLF.sub.-- SV5 446-467 PVMAT.sub.-- PI4HA 312-332 PVGLH.sub.-- HCMVA 691-712 PVMAT.sub.-- PI4HB 312-332 PVGLH.sub.-- HCMVT 690-711 PVMAT.sub.-- SV41 308-328 PVGLH.sub.-- HSVE4 304-325 PVMAT.sub.-- SV5 308-328 PVGLH.sub.-- HSVEB 297-318 PVME1.sub.-- IBV6 74-94 PVGLH.sub.-- HSVSA 658-679 PVME1.sub.-- IBVB 74-94 PVGLI.sub.-- HSV2 2-23 PVME1.sub.-- IBVB2 74-94 PVGLI.sub.-- HSV23 2-23 PVME1.sub.-- IBVK 74-94 PVGLM.sub.-- BUNGE 197-218 PVMSA.sub.-- HPBDB 201-221 PVGLM.sub.-- BUNL7 190-211 PVMSA.sub.-- HPBGS 209-229 PVGLM.sub.-- BUNSH 190-211 PVMSA.sub.-- HPBHE 293-313 PVGLM.sub.-- BUNYW 193-214 PVMSA.sub.-- WHV1 207-227 PVGLY.sub.-- LASSG 237-258 PVMSA.sub.-- WHV59 212-232 PVGLY.sub.-- LASSJ 238-259 PVMSA.sub.-- WHV7 212-232 PVGP8.sub.-- EBV 67-88 PVMSA.sub.-- WHV8 212-232 PVMO1.sub.-- VACCC 281-302 PVMSA.sub.-- WHVBI 212-232 PVMO1.sub.-- VACCV 230-251 PVMSA.sub.-- WHVW6 63-83 PVMAT.sub.-- HRSVA 139-160 PVMAT.sub.-- RINDK 200-221 239-260 PVMAT.sub.-- TRTV 122-143 PVME1.sub.-- CVHOC 64-85 PVMSA.sub.-- HPBDB 201-222 PVMSA.sub.-- HPBVO 70-91 PVMSA.sub.-- HPBV2 244-265 PVMSA.sub.-- HPBV4 244-265 PVMSA.sub.-- HPBV9 244-265 PVMSA.sub.-- HPBVA 233-254 PVMSA.sub.-- HPBVD 70-91 PVMSA.sub.-- HPBVI 233-254 PVMSA.sub.-- HPBVJ 233-254 PVMSA.sub.-- HPBVL 233-254 PVMSA.sub.-- HPBVN 70-91 PVMSA.sub.-- HPBVO 233-254 PVMSA.sub.-- HPBVP 244-265 PVMSA.sub.-- HPBVR 244-265 PVMSA.sub.-- HPBVS 70-91 PVMSA.sub.-- HPBVW 233-254 PVMSA.sub.-- HPBVY 233-254 PVMSA.sub.-- HPBVZ 233-254 PVMT2.sub.-- IAANN 25-46 PVMT2.sub.-- IABAN 25-46 PVMT2.sub.-- IAFOW 25-46 PVMT2.sub.-- IAFPR 25-46 PVMT2.sub.-- IAFPW 25-46 PVMT2.sub.-- IALE1 25-46 PVMT2.sub.-- IALE2 25-46 PVMT2.sub.-- IAMAN 25-46 PVMT2.sub.-- IAPUE 25-46 PVMT2.sub.-- IASIN 25-46 PVMT2.sub.-- IAUDO 25-46 PVMT2.sub.-- IAWIL 25-46

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

Additionally,

"X" may represent an amino group, a hydrophobic group, including but not limited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

"Z" may represent a carboxyl group; an amido group; a T-butyloxycarbonyl group; a macromolecular carrier group including but not limited to lipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

The peptides of the invention may be synthesized or prepared by techniques well known in the art. See, for example, Creighton, 1983, Proteins: Structures and Molecular Principles, W.H. Freeman and Co., NY, which is incorporated herein by reference in its entirety. Short peptides, for example, can be synthesized on a solid support or in solution. Longer peptides may be made using recombinant DNA techniques. Here, the nucleotide sequences encoding the peptides of the invention may be synthesized, and/or cloned, and expressed according to techniques well known to those of ordinary skill in the art. See, for example, Sambrook, et al., 1989, Molecular Cloning, A Laboratory Manual, Vols. 1-3, Cold Spring Harbor Press, NY.

The peptides of the invention may alternatively be synthesized such that one or more of the bonds which link the amino acid residues of the peptides are non-peptide bonds. These alternative non-peptide bonds may be formed by utilizing reactions well known to those in the art, and may include, but are not limited to imino, ester, hydrazide, semicarbazide, and azo bonds, to name but a few. In yet another embodiment of the invention, peptides comprising the sequences described above may be synthesized with additional chemical groups present at their amino and/or carboxy termini, such that, for example, the stability, bioavailability, and/or inhibitory activity of the peptides is enhanced. For example, hydrophobic groups such as carbobenzoxyl, dansyl, or t-butyloxycarbonyl groups, may be added to the peptides' amino termini. Likewise, an acetyl group or a 9-fluorenylmethoxy-carbonyl group may be placed at the peptides' amino termini. (See "X" in Tables I to IV, above.) Additionally, the hydrophobic group, t-butyloxycarbonyl, or an amido group may be added to the peptides' carboxy termini. (See "Z" in Tables I to IV, above.)

Further, the peptides of the invention may be synthesized such that their steric configuration is altered. For example, the D-isomer of one or more of the amino acid residues of the peptide may be used, rather than the usual L-isomer.

Still further, at least one of the amino acid residues of the peptides of the invention may be substituted by one of the well known non-naturally occurring amino acid residues. Alterations such as these may serve to increase the stability, bioavailability and/or inhibitory action of the peptides of the invention.

Any of the peptides described above may, additionally, have a macromolecular carrier group covalently attached to their amino and/or carboxy termini. Such macromolecular carrier groups may include, for example, lipid-fatty acid conjugates, polyethylene glycol, carbohydrates or additional peptides. "X", in Tables I to IV, above, may therefore additionally represent any of the above macromolecular carrier groups covalently attached to the amino terminus of a peptide, with an additional peptide group being preferred. Likewise, "Z", in Tables I to IV, may additionally represent any of the macromolecular carrier groups described above.

Described herein, are methods for ability of a compound, such as the peptides of the invention, to inhibit membrane fusion events. Specifically, assays for cell fusion events are described in Section 5.5.1, below, and assays for antiviral activity are described in Section 5.5.2, below.

Assays for cell fusion events are well known to those of skill in the art, and may be used in conjunction, for example, with the peptides of the invention to test the peptides' antifusogenic capabilities.

Cell fusion assays are generally performed in vitro. Such an assay may comprise culturing cells which, in the absence of any treatment would undergo an observable level of syncytial formation. For example, uninfected cells may be incubated in the presence of cells chronically infected with a virus that induces cell fusion. Such viruses may include, but are not limited to, HIV, SIV, or respiratory syncytial virus.

For the assay, cells are incubated in the presence of a peptide to be assayed. For each peptide, a range of peptide concentrations may be tested. This range should include a control culture wherein no peptide has been added.

Standard conditions for culturing cells, well known to those of ordinary skill in the art, are used. After incubation for an appropriate period (24 hours at 37.degree. C., for example) the culture is examined microscopically for the presence of multinucleated giant cells, which are indicative of cell fusion and syncytial formation. Well known stains, such as crystal violet stain, may be used to facilitate the visualization of syncytial formation.

The antiviral activity exhibited by the peptides of the invention may be measured, for example, by easily performed in vitro assays, such as those described below, which can test the peptides' ability to inhibit syncytia formation, or their ability to inhibit infection by cell-free virus. Using these assays, such parameters as the relative antiviral activity of the peptides, exhibit against a given strain of virus and/or the strain specific inhibitory activity of the peptide can be determined.

A cell fusion assay may be utilized to test the peptides' ability to inhibit viral-induced, such as HIV-induced, syncytia formation in vitro. Such an assay may comprise culturing uninfected cells in the presence of cells chronically infected with a syncytial-inducing virus and a peptide to be assayed. For each peptide, a range of peptide concentrations may be tested. This range should include a control culture wherein no peptide has been added. Standard conditions for culturing, well known to those of ordinary skill in the art, are used. After incubation for an appropriate period (24 hours at 37.degree. C., for example) the culture is examined microscopically for the presence of multinucleated giant cells, which are indicative of cell fusion and syncytia formation. Well known stains, such as crystal violet stain, may be used to facilitate syncytial visualization. Taking HIV as an example, such an assay would comprise CD-4.sup.+ cells (such as Molt or CEM cells, for example) cultured in the presence of chronically HIV-infected cells and a peptide to be assayed.

Other well known characteristics of viral infection may also be assayed to test a peptide's antiviral capabilities. Once again taking HIV as an example, a reverse transcriptase (RT) assay may be utilized to test the peptides' ability to inhibit infection of CD-4.sup.+ cells by cell-free HIV. Such an assay may comprise culturing an appropriate concentration (i.e., TCID.sub.50) of virus and CD-4.sup.+ cells in the presence of the peptide to be tested. Culture conditions well known to those in the art are used. As above, a range of peptide concentrations may be used, in addition to a control culture wherein no peptide has been added. After incubation for an appropriate period (e.g., 7 days) of culturing, a cell-free supernatant is prepared, using standard procedures, and tested for the present of RT activity as a measure of successful infection. The RT activity may be tested using standard techniques such as those described by, for example, Goff et al. (Goff, S. et al., 1981, J. Virol. 38:239-248) and/or Willey et al. (Willey, R. et al., 1988, J. Virol. 62:139-147). These references are incorporated herein by reference in their entirety.

Standard methods which are well-known to those of skill in the art may be utilized for assaying non-retroviral activity. See, for example, Pringle et al. (Pringle, C. R. et al., 1985, J. Medical Virology 17:377-386) for a discussion of respiratory syncytial virus and parainfluenza virus activity assay techniques. Further, see, for example, "Zinsser Microbiology", 1988, Joklik, W. K. et al., eds., Appleton & Lange, Norwalk, Conn., 19th ed., for a general review of such techniques. These references are incorporated by reference herein in their entirety. In addition, the Examples presented below, in Sections 17, 18, 26 and 27 each provide additional assays for the testing of a compound's antiviral capability.

In vivo assays may also be utilized to test, for example, the antiviral activity of the peptides of the invention. To test for anti-HIV activity, for example, the in vivo model described in Barnett et al. (Barnett, S. W. et al., 1994, Science 266:642-646) may be used.

Additionally, anti-RSV activity can be assayed in vivo via well known mouse models. For example, RSV can be administered intranasally to mice of various inbred strains. Virus replicates in lungs of all strains, but the highest titers are obtained in P/N, C57L/N and DBA/2N mice. Infection of BALB/c mice produces an asymptomatic bronchiolitis characterized by lymphocytic infiltrates and pulmonary virus titers of 10.sup.4 to 10.sup.5 pfu/g of lung tissue (Taylor, G. et al., 1984, Infect. Immun. 43:649-655).

Cotton rat models of RSV are also well known. Virus replicates to high titer in the nose and lungs of the cotton rat but produces few if any signs of inflammation.

The peptides of the invention may be utilized as antifusogenic or antiviral compounds, or as compounds which modulate intracellular processes involving coiled coil peptide structures. Further, such peptides may be used to identify agents which exhibit antifusogenic, antiviral or intracellular modulatory activity. Still further, the peptides of the invention may be utilized as organism or viral type/subtype-specific diagnostic tools.

The antifusogenic capability of the peptides of the invention may additionally be utilized to inhibit or treat/ameliorate symptoms caused by processes involving membrane fusion events. Such events may include, for example, virus transmission via cell-cell fusion, abnormal neurotransmitter exchange via cell-fusion, and sperm-egg fusion. Further, the peptides of the invention may be used to inhibit free viral, such as retroviral, particularly HIV, transmission to uninfected cells wherein such viral infection involves membrane fusion events or involves fusion of a viral structure with a cell membrane. Among the intracellular disorders involving coiled coil peptides structures which may be ameliorated by the peptides of the invention are disorders involving, for example, bacterial toxins.

With respect to antiviral activity, the viruses whose transmission may be inhibited by the peptides of the invention include, but are not limited to all strains of the viruses listed above, in Tables V through VII, and IX through XIV.

These viruses include, for example, human retroviruses, particularly HIV-1 and HIV-2 and the human T-lymphocyte viruses (HTLV-I and II). The non-human retroviruses whose transmission may be inhibited by the peptides of the invention include, but are not limited to bovine leukosis virus, feline sarcoma and leukemia viruses, simian immunodeficiency, sarcoma and leukemia viruses;, and sheep progress pneumonia viruses.

Non retroviral viruses whose transmission may be inhibited by the peptides of the invention include, but are not limited to human respiratory syncytial virus, canine distemper virus, newcastle disease virus, human parainfluenza virus, influenza viruses, measles viruses, Epstein-Barr viruses, hepatitis B viruses, and simian Mason-Pfizer viruses.

Non enveloped viruses whose transmission may be inhibited by the peptides of the invention include, but are not limited to picornaviruses such as polio viruses, hepatitis A virus, enterovirus, echoviruses and coxsackie viruses, papovaviruses such as papilloma virus, parvoviruses, adenoviruses and reoviruses.

As discussed more fully, below, in Section 5.5.1 and in the Example presented, below, in Section 8, DP107, DP178, DP107 analog and DP178 analog peptides form non-covalent protein-protein interactions which are required for normal activity of the virus. Thus, the peptides of the invention may also be utilized as components in assays for the identification of compounds that irterfere with such protein-protein interactions and may, therefore, act as antiviral agents. These assays are discussed, below, in Section 5.5.1.

As demonstrated in the Example presented below in Section 6, the antiviral activity of the peptides of the invention may show a pronounced type and subtype specificity, i.e., specific peptides may be effective in inhibiting the activity of only specific viruses. This feature of the invention presents many advantages. One such advantage, for example, lies in the field of diagnostics, wherein one can use the antiviral specificity of the peptide of the invention to ascertain the identity of a viral isolate. With respect to HIV, one may easily determine whether a viral isolate consists of an HIV-1 or HIV-2 strain. For example, uninfected CD-4.sup.+ cells may be co-infected with an isolate which has been identified as containing HIV the DP178 (SEQ ID:1) peptide, after which the retroviral activity of cell supernatants may be assayed, using, for example, the techniques described above in Section 5.2. Those isolates whose retroviral activity is completely or nearly completely inhibited contain HIV-1. Those isolates whose viral activity is unchanged or only reduced by a small amount, may be considered to not contain HIV-1. Such an isolate may then be treated with one or more of the other DP178 peptides of the invention, and subsequently be tested for its viral activity in order to determine the identify of the viral isolate. The DP107 and DP178 analogs of the invention may also be utilized in a diagnostic capacity specific to the type and subtype of virus or organism in which the specific peptide sequence is found. A diagnostic procedure as described, above, for DP178, may be used in conjunction with the DP107/DP178 analog of interest.

As demonstrated in the Example presented in Section 8, below, DP107 and DP178 portions of the TM protein gp41 form non-covalent protein-protein interactions. As is also demonstrated, the maintenance of such interactions is necessary for normal viral infectivity. Thus, compounds which bind DP107, bind DP178, and/or act to disrupt normal DP107/DP178 protein-protein interactions may act as antifusogenic, antiviral or cellular modulatory agents. Described below are assays for the identification of such compounds. Note that, while, for ease and clarity of discussion, DP107 and DP178 peptides will be used as components of the assays described, but it is to be understood that any of the DP107 analog or DP178 analog peptides described, above, in Sections 5.1 through 5.3 may also be utilized as part of these screens for compounds.

Compounds which may be tested for an ability to bind DP107, DP178, and/or disrupt DP107/DP178 interactions, and which therefore, potentially represent antifusogenic, antiviral or intracellular modulatory compounds, include, but are not limited to, peptides made of D- and/or L-configuration amino acids (in, for example, the form of random peptide libraries; see Lam, K. S. et al., 1991, Nature 354:82-84), phosphopeptides (in, for example, the form of random or partially degenerate, directed phosphopeptide libraries; see, for example, Songyang, Z. et al., 1993, Cell 72:767-778), antibodies, and small organic or inorganic molecules. Synthetic compounds, natural products, and other sources of potentially effective materials may be screened in a variety of ways, as described in this Section.

The compounds, antibodies, or other molecules identified may be tested, for example, for an ability to inhibit cell fusion or viral activity, utilizing, for example, assays such as those described, above, in Section 5.5.

Among the peptides which may be tested are soluble peptides comprising DP107 and/or DP178 domains, and peptides comprising DP107 and/or DP178 domains having one or more mutations within one or both of the domains, such as the M41-P peptide described, below, in the Example presented in Section 8, which contains a isoleucine to proline mutation within the DP178 sequence.

In one embodiment of such screening methods is a method for identifying a compound to be tested for antiviral ability comprising:

(a) exposing at least one compound to a peptide comprising a DP107 peptide for a time sufficient to allow binding of the compound to the DP107 peptide;

(b) removing non-bound compounds; and

(c) determining the presence of the compound bound to the DP107 peptide, thereby identifying an agent to be tested for antiviral ability.

In a second embodiment of such screening methods is a method for identifying a compound to be tested for antiviral ability comprising:

(a) exposing at least one compound to a peptide comprising a DP178 peptide for a time sufficient to allow binding of the compound to the DP178 peptide;

(b) removing non-bound compounds; and

(c) determining the presence of the compound bound to the DP178 peptide, thereby identifying an agent to be tested for antiviral ability.

One method utilizing these types of approaches that may be pursued in the isolation of such DP107-binding or DP178-binding compounds is an assay which would include the attachment of either the DP107 or the DP178 peptide to a solid matrix, such as, for example, agarose or plastic beads, microtiter plate wells, petri dishes, or membranes composed of, for example, nylon or nitrocellulose. In such an assay system, either the DP107 or DP178 protein may be anchored onto a solid surface, and the compound, or test substance, which is not anchored, is labeled, either directly or indirectly. In practice, microtiter plates are conveniently utilized. The anchored component may be immobilized by non-covalent or covalent attachments. Non-covalent attachment may be accomplished simply by coating the solid surface with a solution of the protein and drying.

Alternatively, an immobilized antibody, preferably a monoclonal antibody, specific for the protein may be used to anchor the protein to the solid surface. The surfaces may be prepared in advance and stored.

In order to conduct the assay, the labeled compound is added to the coated surface containing the anchored DP107 or DP178 peptide. After the reaction is complete, unreacted components are removed (e.g., by washing) under conditions such that any complexes formed will remain immobilized on the solid surface. The detection of complexes anchored on the solid surface can be accomplished in a number of ways. Where the compound is pre-labeled, the detection of label immobilized on the surface indicates that complexes were formed. Where the labeled component is not pre-labeled, an indirect label can be used to detect complexes anchored on the surface; e.g., using a labeled antibody specific for the compound (the antibody, in turn, may be directly labeled or indirectly labeled with a labeled anti-Ig antibody).

Alternatively, such an assay can be conducted in a liquid phase, the reaction products separated from unreacted components, and complexes detected; e.g., using an immobilized antibody specific for DP107 or DP178, whichever is appropriate for the given assay, or ab antibody specific for the compound, i.e., the test substance, in order to anchor any complexes formed in solution, and a labeled antibody specific for the other member of the complex to detect anchored complexes.

By utilizing procedures such as this, large numbers of types of molecules may be simultaneously screened for DP107 or DP178-binding capability, and thus potential antiviral activity.

Further, compounds may be screened for an ability to inhibit the formation of or, alternatively, disrupt DP107/DP178 complexes. Such compounds may then be tested for antifusogenic, antiviral or intercellular modulatory capability. For ease of description, DP107 and DP178 will be referred to as "binding partners." Compounds that disrupt such interactions may exhibit antiviral activity. Such compounds may include, but are not limited to molecules such as antibodies, peptides, and the like described above.

The basic principle of the assay systems used to identify compounds that interfere with the interaction between the DP107 and DP178 peptides involves preparing a reaction mixture containing peptides under conditions and for a time sufficient to allow the two peptides to interact and bind, thus forming a complex. In order to test a compound for disruptive activity, the reaction is conducted in the presence and absence of the test compound, i.e., the test compound may be initially included in the reaction mixture, or added at a time subsequent to the addition of one of the binding partners; controls are incubated without the test compound or with a placebo. The formation of any complexes between the binding partners is then detected. The formation of a complex in the control reaction, but not in the reaction mixture containing the test compound indicates that the compound interferes with the interaction of the DP107 and DP178 peptides.

The assay for compounds that interfere with the interaction of the binding partners can be conducted in a heterogeneous or homogeneous format. Heterogeneous assays involve anchoring one of the binding partners onto a solid phase and detecting complexes anchored on the solid phase at the end of the reaction. In homogeneous assays, the entire reaction is carried out in a liquid phase. In either approach, the order of addition of reactants can be varied to obtain different information about the compounds being tested. For example, test compounds that interfere with the interaction between the binding partners, e.g., by competition, can be identified by conducting the reaction in the presence of the test substance; i.e., by adding the test substance to the reaction mixture prior to or simultaneously with the binding partners. On the other hand, test compounds that disrupt preformed complexes, e.g. compounds with higher binding constants that displace one of the binding partners from the complex, can be tested by adding the test compound to the reaction mixture after complexes have been formed. The various formats are described briefly below.

In a heterogeneous assay system, one binding partner, e.g., either the DP107 or DP178 peptide, is anchored onto a solid surface, and its binding partner, which is not anchored, is labeled, either directly or indirectly. In practice, microtiter plates are conveniently utilized. The anchored species may be immobilized by non-covalent or covalent attachments. Non-covalent attachment may be accomplished simply by coating the solid surface with a solution of the protein and drying. Alternatively, an immobilized antibody specific for the protein may be used to anchor the protein to the solid surface. The surfaces may be prepared in advance and stored.

In order to conduct the assay, the binding partner of the immobilized species is added to the coated surface with or without the test compound. After the reaction is complete, unreacted components are removed (e.g., by washing) and any complexes formed will remain immobilized on the solid surface. The detection of complexes anchored on the solid surface can be accomplished in a number of ways. Where the binding partner was pre-labeled, the detection of label immobilized on the surface indicates that complexes were formed. Where the binding partner is not pre-labeled, an indirect label can be used to detect complexes anchored on the surface; e.g., using a labeled antibody specific for the binding partner (the antibody, in turn, may be directly labeled or indirectly labeled with a labeled anti-Ig antibody). Depending upon the order of addition of reaction components, test compounds which inhibit complex formation or which disrupt preformed complexes can be detected.

Alternatively, the reaction can be conducted in a liquid phase in the presence or absence of the test compound, the reaction products separated from unreacted components, and complexes detected; e.g., using an immobilized antibody specific for one binding partner to anchor any complexes formed in solution, and a labeled antibody specific for the other binding partner to detect anchored complexes. Again, depending upon the order of addition of reactants to the liquid phase, test compounds which inhibit complex or which disrupt preformed complexes can be identified.

In an alternate embodiment of the invention, a homogeneous assay can be used. In this approach, a preformed complex of the DP107 and DP178 peptides is prepared in which one of the binding partners is labeled, but the signal generated by the label is quenched due to complex formation (see, e.g., U.S. Pat. No. 4,109,496 by Rubenstein which utilizes this approach for immunoassays). The addition of a test substance that competes with and displaces one of the binding partners from the preformed complex will result in the generation of a signal above background. In this way, test substances which disrupt DP-107/DP-178 protein-protein interaction can be identified.

In an alternative screening assay, test compounds may be assayed for the their ability to disrupt a DP178/DP107 interaction, as measured immunometrically using an antibody specifically reactive to a DP107/DP178 complex (i.e., an antibody that recognizes neither DP107 nor DP178 individually). Such an assay acts as a competition assay, and is based on techniques well known to those of skill in the art.

The above competition assay may be described, by way of example, and not by way of limitation, by using the DP178 and M41.DELTA.178 peptides and by assaying test compounds for the disruption of the complexes formed by these two peptides by immunometrically visualizing DP178/M41.DELTA.178 complexes via the human recombinant Fab, Fab-d, as described, below, in the Example presented in Section 8. M41.DELTA.178 is a maltose binding fusion protein containing a gp41 region having its DP178 domain deleted, and is described, below, in the Example presented in Section 8.

Utilizing such an assay, M41.DELTA.178 may be immobilized onto solid supports such as microtiter wells. A series of dilutions of a test compound may then be added to each M41.DELTA.178-containing well in the presence of a constant concentration of DP-178 peptide. After incubation, at, for example, room temperature for one hour, unbound DP-178 and test compound are removed from the wells and wells are then incubated with the DP178/M41.DELTA.178-specific Fab-d antibody. After incubation and washing, unbound Fab-d is removed from the plates and bound Fab-d is quantitated. A no-inhibitor control should also be conducted. Test compounds showing an ability to disrupt DP178/M41.DELTA.178 complex formation are identified by their concentration-dependent decrease in the level of Fab-d binding.

A variation of such an assay may be utilized to perform a rapid, high-throughput binding assay which is capable of directly measuring DP178 binding to M41.DELTA.178 for the determination of binding constants of the ligand of inhibitory constants for competitors of DP178 binding.

Such an assay takes advantage of accepted radioligand and receptor binding principles. (See, for example, Yamamura, H. I. et al., 1985, "Neurotransmitter Receptor Binding", 2nd ed., Raven Press, NY.) As above, M41.DELTA.178 is immobilized onto a solid support such as a microtiter well. DP178 binding to M41.DELTA.178 is then quantitated by measuring the fraction of DP178 that is bound as .sup.125 I-DP178 and calculating the total amount bound using a value for specific activity (dpm/.mu.g peptide) determined for each labeled DP178 preparation. Specific binding to M41.DELTA.178 is defined as the difference of the binding of the labeled DP178 preparation in the microtiter wells (totals) and the binding in identical wells containing, in addition, excess unlabeled DP178 (nonspecifics).

The peptides of the invention may be administered using techniques well known to those in the art. Preferably, agents are formulated and administered systemically. Techniques for formulation and administration may be found in "Remington's Pharmaceutical Sciences", 18th ed., 1990, Mack Publishing Co., Easton, Pa. Suitable routes may include oral, rectal, transmucosal, or intestinal administration; parenteral delivery, including intramuscular, subcutaneous, intramedullary injections, as well as, intrathecal, direct intraventricular, intravenous, intraperitoneal, intranasal, or intraocular injections, just to name a few. For injection, the agents of the invention may be formulated in aqueous solutions, preferably in physiologically compatible buffers such as Hanks' solution, Ringer's solution, or physiological saline buffer. For such transmucosal administration, penetrants appropriate to the barrier to be permeated are used in the formulation. Such penetrants are generally known in the art.

In instances wherein intracellular administration of the peptides of the invention or other inhibitory agents is preferred, techniques well known to those of ordinary skill in the art may be utilized. For example, such agents may be encapsulated into liposomes, then administered as described above. Liposomes are spherical lipid bilayers with aqueous interiors. All molecules present in an aqueous solution at the time of liposome formation are incorporated into the aqueous interior. The liposomal contents are both protected from the external microenvironment and, because liposomes fuse with cell membranes, are effectively delivered into the cell cytoplasm. Additionally, due to their hydrophobicity, when small molecules are to be administered, direct intracellular administration may be achieved.

Nucleotide sequences encoding the peptides of the invention which are to be intracellularly administered may be expressed in cells of interest, using techniques well known to those of skill in the art. For example, expression vectors derived from viruses such as retroviruses, vaccinia viruses, adeno-associated viruses, herpes viruses, or bovine papilloma viruses, may be used for delivery and expression of such nucleotide sequences into the targeted cell population. Methods for the construction of such vectors and expression constructs are well known. See, for example, Sambrook et al., 1989, Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Press, Cold Spring Harbor NY, and Ausubel et al., 1989, Current Protocols in Molecular Biology, Greene Publishing Associates and Wiley Interscience, NY.

With respect to HIV, peptides of the invention, particularly DP107 and DP178, may be used as therapeutics in the treatment of AIDS. In addition, the peptides may be used as prophylactic measures in previously uninfected individuals after acute exposure to an HIV virus. Examples of such prophylactic use of the peptides may include, but are not limited to, prevention of virus transmission from mother to infant and other settings where the likelihood of HIV transmission exists, such as, for example, accidents in health care settings wherein workers are exposed to HIV-containing blood products. The successful use of such treatments do not rely upon the generation of a host immune response directed against such peptides.

Effective dosages of the peptides of the invention to be administered may be determined through procedures well known to those in the art which address such parameters as biological half-life, bioavailability, and toxicity. Given the data presented below in Section 6, DP178, for example, may prove efficacious in vivo at doses required to achieve circulating levels of about 1 to about 10 ng per ml of peptide.

A therapeutically effective dose refers to that amount of the compound sufficient to result in amelioration of symptoms or a prolongation of survival in a patient. Toxicity and therapeutic efficacy of such compounds can be determined by standard pharmaceutical procedures in cell cultures or experimental animals, e.g., for determining the LD.sub.50 (the dose lethal to 50% of the population) and the ED50 (the dose therapeutically effective in 50% of the population). The dose ratio between toxic and therapeutic effects is the therapeutic index and it can be expressed as the ratio LD.sub.50 /ED.sub.50. Compounds which exhibit large therapeutic indices are preferred. The data obtained from these cell culture assays and animal studies can be used in formulating a range of dosage for use in humans. The dosage of such compounds lies preferably within a range of circulating concentrations that include the ED50 with little or no toxicity. The dosage may vary within this range depending upon the dosage form employed and the route of administration utilized. For any compound used in the method of the invention, the therapeutically effective dose can be estimated initially from cell culture assays. A dose may be formulated in animal models to achieve a circulating plasma concentration range that includes the IC.sub.50 (e.g., the concentration of the test compound which achieves a half-maximal inhibition of the fusogenic event, such as a half-maximal inhibition of viral infection relative to the amount of the event in the absence of the test compound) as determined in cell culture. Such information can be used to more accurately determine useful doses in humans. Levels in plasma may be measured, for example, by high performance liquid chromatography (HPLC).

The peptides of the invention may, further, serve the role of a prophylactic vaccine, wherein the host raises antibodies against the peptides of the invention, which then serve to neutralize HIV viruses by, for example, inhibiting further HIV infection.

Administration of the peptides of the invention as a prophylactic vaccine, therefore, would comprise administering to a host a concentration of peptides effective in raising an immune response which is sufficient to neutralize HIV, by, for example, inhibiting HIV ability to infect cells. The exact concentration will depend upon the specific peptide to be administered, but may be determined by using standard techniques for assaying the development of an immune response which are well known to those of ordinary skill in the art. The peptides to be used as vaccines are usually administered intramuscularly.

The peptides may be formulated with a suitable adjuvant in order to enhance the immunological response. Such adjuvants may include, but are not limited to mineral gels such as aluminum hydroxide; surface active substances such as lysolecithin, pluronic polyols, polyanions; other peptides; oil emulsions; and potentially useful human adjuvants such as BCG and Corynebacterium parvum. Many methods may be used to introduce the vaccine formulations described here. These methods include but are not limited to oral, intradermal, intramuscular, intraperitoneal, intravenous, subcutaneous, and intranasal routes.

Alternatively, an effective concentration of polyclonal or monoclonal antibodies raised against the peptides of the invention may be administered to a host so that no uninfected cells become infected by HIV. The exact concentration of such antibodies will vary according to each specific antibody preparation, but may be determined using standard techniques well known to those of ordinary skill in the art. Administration of the antibodies may be accomplished using a variety of techniques, including, but not limited to those described in this section.

For all such treatments described above, the exact formulation, route of administration and dosage can be chosen by the individual physician in view of the patient's condition. (See e.g. Fingl et al., 1975, in "The Pharmacological Basis of Therapeutics", Ch. 1 p1).

It should be noted that the attending physician would know how to and when to terminate, interrupt, or adjust administration due to toxicity, or to organ dysfunctions. (Conversely, the attending physician would also know to adjust treatment to higher levels if the clinical response were not adequate (precluding toxicity). The magnitude of an administrated dose in the management of the oncogenic disorder of interest will vary with the severity of the condition to be treated and the route of administration. The dose and perhaps dose frequency, will also vary according to the age, body weight, and response of the individual patient. A program comparable to that discussed above may be used in veterinary medicine.

Use of pharmaceutically acceptable carriers to formulate the compounds herein disclosed for the practice of the invention into dosages suitable for systemic administration is within the scope of the invention. With proper choice of carrier and suitable manufacturing practice, the compositions of the present invention, in particular, those formulated as solutions, may be administered parenterally, such as by intravenous injection. The compounds can be formulated readily using pharmaceutically acceptable carriers well known in the art into dosages suitable for oral administration. Such carriers enable the compounds of the invention to be formulated as tablets, pills, capsules, liquids, gels, syrups, slurries, suspensions and the like, for oral ingestion by a patient to be treated.

Pharmaceutical compositions suitable for use in the present invention include compositions wherein the active ingredients are contained in an effective amount to achieve its intended purpose. Determination of the effective amounts is well within the capability of those skilled in the art, especially in light of the detailed disclosure provided herein.

In addition to the active ingredients, these pharmaceutical compositions may contain suitable pharmaceutically acceptable carriers comprising excipients and auxiliaries which facilitate processing of the active compounds into preparations which can be used pharmaceutically. The preparations formulated for oral administration may be in the form of tablets, dragees, capsules, or solutions.

The pharmaceutical compositions of the present invention may be manufactured in a manner that is itself known, e.g., by means of conventional mixing, dissolving, granulating, dragee-making, levigating, emulsifying, encapsulating, entrapping or lyophilizing processes.

Pharmaceutical formulations for parenteral administration include aqueous solutions of the active compounds in water-soluble form. Additionally, suspensions of the active compounds may be prepared as appropriate oily injection suspensions. Suitable lipophilic solvents or vehicles include fatty oils such as sesame oil, or synthetic fatty acid esters, such as ethyl oleate or triglycerides, or liposomes. Aqueous injection suspensions may contain substances which increase the viscosity of the suspension, such as sodium carboxymethyl cellulose, sorbitol, or dextran. Optionally, the suspension may also contain suitable stabilizers or agents which increase the solubility of the compounds to allow for the preparation of highly concentrated solutions.

Pharmaceutical preparations for oral use can be obtained by combining the active compounds with solid excipient, optionally grinding a resulting mixture, and processing the mixture of granules, after adding suitable auxiliaries, if desired, to obtain tablets or dragee cores. Suitable excipients are, in particular, fillers such as sugars, including lactose, sucrose, mannitol, or sorbitol; cellulose preparations such as, for example, maize starch, wheat starch, rice starch, potato starch, gelatin, gum tragacanth, methyl cellulose, hydroxypropylmethyl-cellulose, sodium carboxymethylcellulose, and/or polyvinylpyrrolidone (PVP). If desired, disintegrating agents may be added, such as the cross-linked polyvinyl pyrrolidone, agar, or alginic acid or a salt thereof such as sodium alginate.

Dragee cores are provided with suitable coatings. For this purpose, concentrated sugar solutions may be used, which may optionally contain gum arabic, talc, polyvinyl pyrrolidone, carbopol gel, polyethylene glycol, and/or titanium dioxide, lacquer solutions, and suitable organic solvents or solvent mixtures. Dyestuffs or pigments may be added to the tablets or dragee coatings for identification or to characterize different combinations of active compound doses.

Pharmaceutical preparations which can be used orally include push-fit capsules made of gelatin, as well as soft, sealed capsules made of gelatin and a plasticizer, such as glycerol or sorbitol. The push-fit capsules can contain the active ingredients in admixture with filler such as lactose, binders such as starches, and/or lubricants such as talc or magnesium stearate and, optionally, stabilizers. In soft capsules, the active compounds may be dissolved or suspended in suitable liquids, such as fatty oils, liquid paraffin, or liquid polyethylene glycols. In addition, stabilizers may be added.

In this example, DP178 (SEQ ID:1) is shown to be a potent inhibitor of HIV-1 mediated CD-4.sup.+ cell-cell fusion and infection by cell free virus. In the fusion assay, this peptide completely blocks virus induced syncytia formation at concentrations of from 1-10 ng/ml. In the infectivity assay the inhibitory concentration is somewhat higher, blocking infection at 90 ng/ml. It is further shown that DP178 (SEQ ID:1) shows that the antiviral activity of DP178 (SEQ ID:1) is highly specific for HIV-1. Additionally, a synthetic peptide, DP-185 (SEQ ID:3), representing a HIV-1-derived DF178 homolog is also found to block HIV-1-mediated syncytia formation.

Peptides were synthesized using Fast Moc chemistry on an Applied Biosystems Model 431A peptide synthesizer. Generally, unless otherwise noted, the peptides contained amidated carboxy termini and acetylated amino termini. Amidated peptides were prepared using Rink resin (Advanced Chemtech) while peptides containing free carboxy termini were synthesized on Wang (p-alkoxy-benzyl-alcohol) resin (Bachem). First residues were double coupled to the appropriate resin and subsequent residues were single coupled. Each coupling step was followed by acetic anhydride capping. Peptides were cleaved from the resin by treatment with trifluoracetic acid (TFA) (10 ml), H.sub.2 O (0.5 ml), thioanisole (0.5 ml), ethanedithiol (0.25 ml), and crystalline phenol (0.75 g). Purification was carried out by reverse phase HPLC. Approximately 50 mg samples of crude peptide were chromatographed on a Waters Delta Pak C18 column (19 mm.times.30 cm, 15.mu. spherical) with a linear gradient; H.sub.2 O/acetonitrile 0.1% TFA. Lyophilized peptides were stored desiccated and peptide solutions were made in water at about 1 mg/ml. Electrospray mass spectrometry yielded the following results: DP178 (SEQ ID:1):4491.87 (calculated 4491.94); DP-180 (SEQ ID:2):4491.45 (calculated 4491.94); DP-185 (SEQ ID:3):not done (calculated 4546.97).

The HIV-1.sub.LAI virus was obtained from R. Gallo (Popovic, M. et al., 1984, Science 224:497-508) and propagated in CEM cells cultured in RPMI 1640 containing 10% fetal calf serum. Supernatant from the infected CEM cells was passed through a 0.2 .mu.m filter and the infections titer estimated in a microinfectivity assay using the AA5 cell line to support virus replication. For this purpose, 25 .mu.l of serial diluted virus was added to 75 .mu.l AA5 cells at a concentration of 2.times.10.sup.5 /ml in a 96-well microtitre plate. Each virus dilution was tested in triplicate. Cells were cultured for eight days by addition of fresh medium every other day. On day 8 post infection, supernatant samples were tested for virus replication as evidenced by reverse transcriptase activity released to the supernatant. The TCID.sub.50 was calculated according to the Reed and Muench formula (Reed, L. J. et al., 1938, Am. J. Hyg. 27:493-497). The titer of the HIV-1.sub.LAI and HIV-1.sub.MN stocks used for these studies, as measured on the AA5 cell line, was approximately 1.4.times.10.sup.6 and 3.8.times.10.sup.4 TCID.sub.50 /ml, respectively.

Approximately 7.times.10.sup.4 Molt cells were incubated with 1.times.10.sup.4 CEM cells chronically infected with the HIV-1.sub.LAI virus in 96-well plates (one-half area cluster plates; Costar, Cambridge, Mass.) in a final volume of 100 .mu.l culture medium as previously described (Matthews, T. J. et al., 1987, Proc. Natl. Acad. Sci. USA 84: 5424-5428). Peptide inhibitors were added in a volume of 10 .mu.l and the cell mixtures were incubated for 24 hr. at 37.degree. C. At that time, multinucleated giant cells were estimated by microscopic examination at a 40.times. magnification which allowed visualization of the entire well in a single field.

Synthetic peptides were incubated at 37.degree. C. with either 247 TCID.sub.50 (for experiment depicted in FIG. 2), or 62 TCID.sub.50 (for experiment depicted in FIG. 3) units of HIV-1.sub.LAI virus or 25 TCID.sub.50 units of HIV-2.sub.NIHZ and CEM CD4.sup.+ cells at peptide concentrations of 0, 0.04, 0.4, 4.0, and 40 .mu.g/ml for 7 days. The resulting reverse transcriptase (RT) activity in counts per minute was determined using the assay described, below, in Section 6.1.5. See, Reed, L. J. et al., 1938, Am. J. Hyg. 27: 493-497 for an explanation of TCID.sub.50 calculations.

The micro-reverse transcriptase (RT) assay was adapted from Goff et al. (Goff, S. et al., 1981, J. Virol. 38:239-248) and Willey et al. (Willey, R. et al., 1988, J. Virol. 62:139-147). Supernatants from virus/cell cultures are adjusted to 1% Triton-X100. A 10 .mu.l sample of supernatant was added to 50 .mu.l of RT cocktail in a 96-well U-bottom microtitre plate and the samples incubated at 37.degree. C. for 90 min. The RT cocktail contained 75 mM KCl, 2 mM dithiothreitol, 5 mM MgCl.sub.2, 5 .mu.g/ml poly A (Pharmacia, cat. No. 27-4110-01), 0.25 units/ml oligo dT (Pharmacia, cat. No. 27-7858-01), 0.05% NP40, 50 mM Tris-HCl, pH 7.8, 0.5 .mu.M non-radioactive dTTP, and 10 .mu.Ci/ml .sup.32 P-dTTP (Amersham, cat. No. PB.10167).

After the incubation period, 40 .mu.l of reaction mixture was applied to a Schleicher and Schuell (S+S) NA45 membrane (or DE81 paper) saturated in 2.times.SSC buffer (0.3M NaCl and 0.003M sodium citrate) held in a S+S Minifold over one sheet of GB003 (S+S) filter paper, with partial vacuum applied. Each well of the minifold was washed four times with 200 .mu.l 2.times.SSC, under full vacuum. The membrane was removed from the minifold and washed 2 more times in a pyrex dish with an excess of 2.times.SSC. Finally, the membrane was drained on absorbent paper, placed on Whatman #3 paper, covered with Saran wrap, and exposed to film overnight at -70.degree. C.

The initial screen for antiviral activity assayed peptides' ability to block syncytium formation induced by overnight co-cultivation of uninfected Molt4 cells with chronically HIV-1 infected CEM cells. The results of several such experiments are presented herein. In the first of these experiments, serial DP178 (SEQ ID:1) peptide concentrations between 10 .mu.g/ml and 12.5 ng/ml were tested for blockade of the cell fusion process. For these experiments, CEM cells chronically infected with either HIV-1.sub.LAI, HIV-1.sub.MN, HIV-1.sub.RF, or HIV-1.sub.SF2 virus were cocultivated overnight with uninfected Molt 4 cells. The results (FIG. 4) show that DP178 (SEQ ID:1) afforded complete protection against each of the HIV-1 isolates down to the lowest concentration of DP178 (SEQ ID:1) used. For HIV.sub.LAI inhibition, the lowest concentration tested was 12.5 ng/ml; for all other HIV-1 viruses, the lowest concentration of DP178 (SEQ ID:1) used in this study was 100 ng/ml. A second peptide, DP-180 (SEQ ID:2), containing the same amino acid residues as DP178 (SEQ ID:1) but arranged in a random order exhibited no evidence of anti-fusogenic activity even at the high concentration of 40 .mu.g/ml (FIG. 4). These observations indicate that the inhibitory effect of DP178 (SEQ ID:1) is primary sequence-specific and not related to non-specific peptide/protein interactions. The actual endpoint (i.e., the lowest effective inhibitory concentration) of DP178 inhibitory action is within the range of 1-10 ng/ml.

The next series of experiments involved the preparation and testing of a DP178 (SEQ ID:1) homolog for its ability to inhibit HIV-1-induced syncytia formation. As shown in FIG. 1, the sequence of DP-185 (SEQ ID:3) is slightly different from DP178 (SEQ ID:1) in that its primary sequence is taken from the HIV-1.sub.SF2 isolate and contains several amino acid differences relative to DP178 (SEQ ID:1) near the N terminus. As shown in FIG. 4, DP-185 (SEQ ID:3), exhibits inhibitory activity even at 312.5 ng/ml, the lowest concentration tested.

The next series of experiments involved a comparison of DP178 (SEQ ID:1) HIV-1 and HIV-2 inhibitory activity. As shown in FIG. 5, DP178 (SEQ ID:1) blocked HIV-1-mediated syncytia formation at peptide concentrations below 1 ng/ml. DP178 (SEQ ID:1) failed, however, to block HIV-2 mediated syncytia formation at concentrations as high as 10 .mu.g/ml. This striking 4 log selectivity of DP178 (SEQ ID:1) as an inhibitor of HIV-1-mediated cell fusion demonstrates an unexpected HIV-1 specificity in the action of DP178 (SEQ ID:1). DP178 (SEQ ID:1) inhibition of HIV-1-mediated cell fusion, but the peptide's inability to inhibit HIV-2 medicated cell fusion in the same cell type at the concentrations tested provides further evidence for the high degree of selectivity associated with the antiviral action of DP178 (SEQ ID:1).

DP178 (SEQ ID:1) was next tested for its ability to block CD-4.sup.+ CEM cell infection by cell free HIV-1 virus. The results, shown in FIG. 2, are from an experiment in which DP178 (SEQ ID:1) was assayed for its ability to block infection of CEM cells by an HIV-1.sub.LAI isolate. Included in the experiment were three control peptides, DP-116 (SEQ ID:9), DP-125 (SEQ ID:8), and DP-118 (SEQ ID:10). DP-116 (SEQ ID:9) represents a peptide previously shown to be inactive using this assay, and DP-125 (SEQ ID:8; Wild, C. et al., 1992, Proc. Natl. Acad, Sci. USA 89:10,537) and DP-118 (SEQ ID:10) are peptides which have previously been shown to be active in this assay. Each concentration (0, 0.04, 0.4, 4, and 40 .mu.g/ml) of peptide was incubated with 247 TCID.sub.50 units of HIV-1.sub.LAI virus and CEM cells. After 7 days of culture, cell-free supernatant was tested for the presence of RT activity as a measure of successful infection. The results, shown in FIG. 2, demonstrate that DP178 (SEQ ID:1) inhibited the de novo infection process mediated by the HIV-1 viral isolate at concentrations as low as 90 ng/ml (IC50=90 ng/ml). In contrast, the two positive control peptides, DP-125 (SEQ: ID:8) and DP-118 (SEQ ID:10), had over 60-fold higher IC50 concentrations of approximately 5 .mu.g/ml.

In a separate experiment, the HIV-1 and HIV-2 inhibitory action of DP178 (SEQ ID:1) was tested with CEM cells and either HIV-1.sub.LAI or HIV-2.sub.NIHZ. 62 TCID.sub.50 HIV-1.sub.LAI or 25 GCID.sub.50 HIV-2.sub.NIHZ were used in these experiments, and were incubated for 7 days. As may be seen in FIG. 3, DE178 (SEQ ID:1) inhibited HIV-1 infection with an IC50 of about 31 ng/ml. In contrast, DP178 (SEQ ID:1) exhibited a much higher IC50 for HIV-2.sub.NIHZ, thus making DP178 (SEQ ID:1) two logs more potent as a HIV-1 inhibitor than a HIV-2 inhibitor. This finding is consistent with the results of the fusion inhibition assay described, above, in Section 6.2.1, and further supports a significant level of selectivity (i.e., for HIV-1 over HIV-2).

In this Example, the 36 amino acid synthetic peptide inhibitor DP178 (SEQ ID:1) is shown to be non-cytotoxic to cells in culture, even at the highest peptide concentrations (40 .mu.g/ml) tested.

Cell proliferation and toxicity assay: Approximately 3.8.times.10.sup.5 CEM cells for each peptide concentration were incubated for 3 days at 37.degree. C. in T25 flasks. Peptides tested were DP178 (SEQ ID:1) and DP-116 (SEQ ID:9), as described in FIG. 1. Peptides were synthesized as described, above, in Section 6.1. The concentrations of each peptide used were 0, 2.5, 10, and 40 .mu.g/ml. Cell counts were taken at incubation times of 0, 24, 48, and 72 hours.

Whether the potent HIV-1 inhibitor DP178 (SEQ ID:1) exhibited any cytotoxic effects was assessed by assaying the peptide's effects on the proliferation and viability of cells in culture. CEM cells were incubated in the presence of varying concentrations of DP178 (SEQ ID:1), and DP-116 (SEQ ID:9), a peptide previously shown to be ineffective as a HIV inhibitor (Wild, C. et al., 1992, Proc. Natl. Acad. Sci. USA 89:10,537-10,541). Additionally, cells were incubated in the absence of either peptide.

The results of the cytotoxicity study demonstrate that DP178 (SEQ ID:1) exhibits no cytotoxic effects on cells in culture. As can be seen, below, in Table XXIV, even the proliferation and viability characteristics of cells cultured for 3 days in the presence of the highest concentration of DP178 (SEQ ID:1) tested (40 .mu.g/ml) do not significantly differ from the DP-116 (SEQ ID:9) or the no-peptide controls. The cell proliferation data is also represented in graphic form in FIG. 6. As was demonstrated in the Working Example presented above in Section 6, DP178 (SEQ ID:1) completely inhibits HIV-1 mediated syncytia formation at peptide concentrations between 1 and 10 ng/ml, and completely inhibits cell-free viral infection at concentrations of at least 90 ng/ml. Thus, this study demonstrates that even at peptide concentrations greater than 3 log higher than the HIV inhibitory dose, DP178 (SEQ ID:1) exhibits no cytotoxic effects.

Soluble recombinant forms of gp41 used in the example described below provide evidence that the DP178 peptide associates with a distal site on gp41 whose interactive structure is influenced by the DP107 leucine zipper motif. A single mutation disrupting the coiled-coil structure of the leucine zipper domain transformed the soluble recombinant gp41 protein from an inactive to an active inhibitor of HIV-1 fusion. This transformation may result from liberation of the potent DP178 domain from a molecular clasp with the leucine zipper, DP107, determinant. The results also indicate that the anti-HIV activity of various gp41 derivatives (peptides and recombinant proteins) may be due to their ability to form complexes with viral gp41 and interfere with its fusogenic process.

Construction of fusion proteins and mutants shown in FIG. 7 was accomplished as follows: the DNA sequence corresponding to the extracellular domain of gp41 (540-686) was cloned into the Xmn I site of the expression vector pMal-p2 (New England Biolab) to give M41. The gp41 sequence was amplified from pgtat (Malim et al., 1988, Nature 355: 181-183) by using polymerase chain reaction (PCR) with upstream primer 5'-ATGACGCTGACGGTACAGGCC-3' (primer A) and downstream primer 5'-TGACTAAGCTTAATACCACAGCCAATTTGTTAT-3' (primer B). M41-P was constructed by using the T7-Gen in vitro mutagenesis kit from United States Biochemicals (USB) following the supplier's instructions. The mutagenic primer (5'-GGAGCTGCTTGGGGCCCCAGAC-3') introduces an Ile to Pro mutation in M41 at position 578. M41.DELTA.107, from which the DP-107 region has been deleted, was made using a deletion mutagenic primer 5'-CCAAATCCCCAGGAGCTGCTCGAGCTGCACTATACCAGAC-3' (primer C) following the USB T7-Gen mutagenesis protocol. M41.DELTA.178, from which the DP-178 region has been deleted, was made by cloning the DNA fragment corresponding to gp41 amino acids 540-642 into the Xmn I site of pMal-p2. Primer A and 5'-ATAGCTTCTAGATTAATTGTTAATTTCTCTGTCCC-3' (primer D) were used in the PCR with the template pgtat to generate the inserted DNA fragments. M41-P was used as the template with primer A and D in PCR to generate M41-P.DELTA.178. All inserted sequences and mutated residues were checked by restriction enzyme analysis and confirmed by DNA sequencing.

The fusion proteins were purified according to the protocol described in the manufacturer's brochure of protein fusion and purification systems from New England Biolabs (NEB). Fusion proteins (10 ng) were analyzed by electrophoresis on 8% SDS polyacrylamide gels. Western blotting analysis was performed as described by Sambrook et al., 1989, Molecular Cloning: A Laboratory Manual, 2d Ed, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., Ch. 18, pp. 64-75. An HIV-1 positive serum diluted 1000-fold, or a human Fab derived from repertoire cloning was used to react with the fusion proteins. The second antibody was HRP-conjugated goat antihuman Fab. An ECL Western blotting detection system (Amersham) was used to detect the bound antibody. A detailed protocol for this detection system was provided by the manufacturer. Rainbow molecular weight markers (Amersham) were used to estimate the size of fusion proteins.

Cell fusion assays were performed as previously described (Matthews et al., 1987, Proc. Natl. Acad. Sci. USA 84: 5424-5481). CEM cells (7.times.10.sup.4) were incubated with HIV-1.sub.IIIB chronically infected CEM cells (10.sup.4) in 96-well flat-bottomed half-area plates (Costar) in 100 .mu.l culture medium. Peptide and fusion proteins at various concentrations in 10 .mu.l culture medium were incubated with the cell mixtures at 37.degree. C. for 24 hours. Multinucleated syncytia were estimated with microscopic examination. Both M41 and M41-P did not show cytotoxicity at the concentrations tested and shown in FIG. 8.

Inhibition of HIV-1 induced cell-cell fusion activity was carried out in the presence of 10 nM DP178 and various concentrations of M41.DELTA.178 or M41-P.DELTA.178 as indicated in FIG. 9. There was no observable syncytia in the presence of 10 nM DP178. No peptide or fusion protein was added in the control samples.

The amino acid sequence of DP178 used is: YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF. For enzyme linked immunoassay (ELISA), M41.DELTA.178 or M41-P.DELTA.178 (5 .mu.g/ml) in 0.1M NaHCO.sub.3, pH 8.6, were coated on 96 wells Linbro ELISA plates (Flow Lab, Inc.) overnight. Each well was washed three times with distilled water then blocked with 3% bovine serum albumin (BSA) for 2 hours. After blocking, peptides with 0.5% BSA in TBST (40 mM Tris-HCl pH7.5, 150 mM NaCl, 0.05% Tween 20) were added to the ELISA plates and incubated at room temperature for 1 hour. After washing three times with TBST, Fab-d was added at a concentration of 10 ng/ml with 0.5% BSA in TBST. The plates were washed three times with rBST after incubation at room temperature for 1 hour. Horse radish peroxidase (HRP) conjugated goat antihuman Fab antiserum at a 2000 fold dilution in TBST with 0.5% BSA was added to each well and incubated at room temperature for 45 minutes. The plates were then washed four times with TBST. The peroxidase substrate o-phenylene diamine (2.5 mg/ml) and 0.15% H.sub.2 O.sub.2 were added to develop the color. The reaction was stopped with an equal volume of 4.5 N H.sub.2 SO.sub.4 after incubation at room temperature for 10 minutes. The optical density of the stopped reaction mixture was measured with a micro plate reader (Molecular Design) at 490 nm. Results are shown in FIG. 10.

As a step toward understanding the roles of the two helical regions in gp41 structure and function, the ectodomain of gp41 was expressed as a maltose binding fusion protein (M41) (FIG. 7). The fusogenic peptide sequence at the N-terminal of gp41 was omitted from this recombinant protein and its derivatives to improve solubility. The maltose binding protein facilitated purification of the fusion proteins under relatively mild, non-denaturing conditions. Because the M41 soluble recombinant gp41 was not glycosylated, lacked several regions of the transmembrane protein (i.e., the fusion peptide, the membrane spanning, and the cytoplasmic domains), and was expressed in the absence of gp120, it was not expected to precisely reflect the structure of native gp41 on HIV-1 virions. Nevertheless, purified M41 folded in a manner that preserved certain discontinuous epitopes as evidenced by reactivity with human monoclonal antibodies, 98-6, 126-6, and 50-69, previously shown to bind conformational epitopes on native gp41 expressed in eukaryotic cells (Xu et al., 1991, J. Virol. 65: 4832-4838; Chen, 1994, J. Virol. 68:2002-2010). Thus, at least certain regions of native gp41 defined by these antibodies appear to be reproduced in the recombinant fusion protein M41 Furthermore, M41 reacted with a human recombinant Fab (Fab-d) that recognizes a conformational epitope on gp41 and binds HIV-1 virions as well as HIV-1 infected cells but not uninfected cells as analyzed by FACS. Deletion of either helix motif, i.e., DP107 or DP178, of the M41 fusion protein eliminated reactivity with Fab-d. These results indicate that both helical regions, separated by 60 amino acids in the primary sequence, are required to maintain the Fab-d epitope.

The wild type M41 fusion protein was tested for anti-HIV-1 activity. As explained, supra, synthetic peptides corresponding to the leucine zipper (DP107) and the C-terminal putative helix (DP178) show potent anti-HIV activity. Despite inclusion of both these regions, the recombinant M41 protein did not affect HIV-1 induced membrane fusion at concentrations as high as 50 .mu.M (Table XXV, below).

Surprisingly, a single amino acid substitution, proline in place of isoleucine in the middle of the leucine zipper motif, yielded a fusion protein (M41-P) which did exhibit antiviral activity (Table XXV and FIG. 8). As seen in Table XXV, M41-P blocked syncytia formation by 90% at approximately 85 nM and neutralized HIV-1.sub.IIIB infection by 90% at approximately 70 nM concentrations. The anti-HIV-1 activity of M41-P appeared to be mediated by the C-terminal helical sequence since deletion of that region from M41-P yielded an inactive fusion protein, M41-P.DELTA.178 (Table XXV). This interpretation was reinforced by experiments demonstrating that a truncated fusion protein lacking the DP178 sequence, M41.DELTA.178, abrogated the potent anti-fusion activity of the DP178 peptide in a concentration-dependent manner (FIG. 9). The same truncated fusion protein containing the proline mutation disrupting the leucine zipper, M41-P.DELTA.178, was not active in similar competition experiments (FIG. 9). The results indicate that the DP178 peptide associates with a second site on gp41 whose interactive structure is dependent on a wild type leucine zipper sequence. A similar interaction may occur within the wild type fusion protein, M41, and act to form an intramolecular clasp which sequesters the DP178 region, making it unavailable for anti-viral activity.

A specific association between these two domains is also indicated by other human monoclonal Fab-d studies. For example, Fab-d failed to bind either the DP178 peptide or the fusion protein M41.DELTA.178, but its epitope was reconstituted by simply mixing these two reagents together (FIG. 10). Again, the proline mutation in the leucine zipper domain of the fusion protein, M41-P.DELTA.178, failed to reconstitute the epitope in similar mixing experiments.

A number of known coiled-coil sequences have been well described in the literature and contain heptad repeat positioning for each amino acid. Coiled-coil nomenclature labels each of seven amino acids of a heptad repeat A through G, with amino acids A and D tending to be hydrophobic positions. Amino acids E and G tend to be charged. These four positions (A, D, E, and G) form the amphipathic backbone structure of a monomeric alpha-helix. The backbones of two or more amphipathic helices interact with each other to form di-, tri-, tetrameric, etc., coiled-coil structures. In order to begin to design computer search motifs, a series of well characterized coiled coils were chosen including yeast transcription factor GCN4, Influenza Virus hemagglutinin loop 36, and human proto-oncogenes c-Myc, c-Fos, and c-Jun. For each peptide sequence, a strict homology for the A and D positions, and a list of the amino acids which could be excluded for the B, C, E, F, and G positions (because they are not observed in these positions) was determined. Motifs were tailored to the DP107 and DP178 sequences by deducing the most likely possibilities for heptad positioning of the amino acids of HIV-1 Bru DP-107, which is known to have coiled-coil structure, and HIV-1 Bru DP178, which is still structurally undefined. The analysis of each of the sequences is contained in FIG. 12. For example, the motif for GCN4 was designed as follows:

1. The only amino acids (using standard single letter amino acid codes) found in the A or D positions of GCN4 were [LMNV].

2. All amino acids were found at B, C, E, F, and G positions except {CFGIMPTW}.

3. The PESEARCH motif would, therefore, be written as follows:

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-

[LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)

Translating or reading the motif: "at the first A position either L, M, N, or V must occur; at positions B and C (the next two positions) accept everything except C, F, G, I, M, P, T, or W; at the D position either L, M, N, or V must occur; at positions E, F, and G (the next positions) accept everything except C, F, G, I, M, P, T, or W." This statement is contained four times in a 28-mer motif and five times in a 35-mer motif. The basic motif key then would be: [LMNV]-{CFGIMPTW}. The motif keys for the remaining well described coiled-coil sequences are summarized in FIG. 12.

The motif design for DP107 and DP178 was slightly different than the 28-mer model sequences described above due to the fact that heptad repeat positions are not defined and the peptides are both longer than 28 residues. FIG. 13 illustrates several possible sequence alignments for both DP107 and DP178 and also includes motif designs based on 28-mer, 35-mer, and full-length peptides. Notice that only slight differences occur in the motifs as the peptides are lengthened. Generally, lengthening the base peptide results in a less stringent motif. This is very useful in broadening the possibilities for identifying DP107-or DP-178-like primary amino acid sequences referred to in this document as "hits".

In addition to making highly specific motifs for each type peptide sequence to be searched, it is also possible to make "hybrid" motifs. These motifs are made by "crossing" two or more very stringent motifs to make a new search algorithm which will find not only both "parent" motif sequences but also any peptide sequences which have similarities to one, the other, or both "parents". For example, in FIG. 14 the "parent" sequence of GCN4 is crossed with each of the possible "parent" motifs of DP-107. Now the hybrid motif must contain all of the amino acids found in the A and D positions of both parents, and exclude all of the amino acids not found in either parent at the other positions. The resulting hybrid from crossing GCN4 or [LMNV]{CFGIMPTW} and DP107 (28-mer with the first L in the D position) or [ILQT]{CDFIMPST}, is [ILMNQTV]{CFIMPT}. Notice that now only two basic hybrid motifs exist which cover both framing possibilities, as well as all peptide lengths of the parent DP-107 molecule. FIG. 15 represents the "hybridizations" of GCN4 with DP-178. FIG. 16 represents the "hybridizations" of DP107 and DP178. It is important to keep in mind that the represented motifs, both parent and hybrid, are motif keys and not the depiction of the full-length motif needed to actually do the computer search.

Hybridizations can be performed on any combination of two or more motifs. FIG. 17 summarizes several three-motif hybridizations including GCN4, DP107 (both frames), and DP178 (also both frames). Notice that the resulting motifs are now becoming much more similar to each other. In fact, the first and third hybrid motifs are actually subsets of the second and fourth hybrid motifs respectively. This means that the first and third hybrid motifs are slightly more stringent than the second and fourth. It should also be noted that with only minor changes in these four motifs, or by hybridizing them, a single motif could be obtained which would find all of the sequences. However, it should be remembered that stringency is also reduced. Finally, the most broad-spectrum and least-stringent hybrid motif is described in FIG. 18 which summarizes the hybridization of GCN4, DP107 (both frames), DP178 (both frames), c-Fos, c-Jun, c-Myc, and Flu loop 36.

A special set of motifs was designed based on the fact that DP-178 is located only approximately ten amino acids upstream of the transmembrane spanning region of gp41 and just C-terminal to a proline which separates DP107 and DP178. It has been postulated that DP178 may be an amphipathic helix when membrane associated, and that the proline might aid in the initiation of the helix formation. The same arrangement was observed in Respiratory Syncytial Virus; however, the DP178-like region in this virus also had a leucine zipper just C-terminal to the proline. Therefore, N-terminal proline-leucine zipper motifs were designed to analyze whether any other viruses might contain this same pattern. The motifs are summarized in FIG. 19.

The PC/Gene protein database contains 5879 viral amino acid sequences (library file PVIRUSES; CD-ROM release 11.0). Of these, 1092 are viral enveloped or glycoprotein sequences (library file PVIRUSE1). Tables V through XIV contain lists of protein sequence names and motif hit locations for all the motifs searched.

FIG. 20 represents search results for HIV-1 BRU isolate gp41 (PC/Gene protein sequence PENV.sub.-- HV1BR). Notice that the hybrid motif which crosses DP-107 and DP-178 (named 107x178x4; the same motif as found in FIG. 16 found three hits including amino acids 550-599, 636-688, and 796-823. These areas include DP-107 plus eight N-terminal and four C-terminal amino acids; DP178 plus seven N-terminal and ten C-terminal amino acids; and an area inside the transmembrane region (cytoplasmic). FIG. 20 also contains the results obtained from searching with the motif named ALLMOTI5, for which the key is found in FIG. 17 {CDGHP} {CFP}x5). This motif also found three hits including DP107 (amino acids 510-599), DP178 (615-717), and a cytoplasmic region (772-841). These hits overlap the hits found by the motif 107x178x4 with considerable additional sequences on both the amino and carboxy termini. This is not surprising in that 107x178x4 is a subset of the ALLMOTI5 hybrid motif. Importantly, even though the stringency of ALLMOTI5 is considerably less than 107x178x4, it still selectively identifies the DP107 and DP178 regions of gp41 shown to contain sequences for inhibitory peptides of HIV-1. The results of these two motif searches are summarized in Table V under the PC/Gene protein sequence name PENV HV1BR. The proline-leucine zipper motifs also gave several hits in HIV-1 BRU including 503-525 which is at the very C-terminus of gp120, just upstream of the cleavage site (P7LZIPC and P12LZIPC); and 735-768 in the cytoplasmic domain of gp41 (P23LZIPC). These results are found in Tables VIII, IX, and X under the same sequence name as mentioned above. Notice that the only area of HIV-1 BRU which is predicted by the Lupas algorithm to contain a coiled-coil region, is from amino acids 635-670. This begins eight amino acids N-terminal to the start and ends eight amino acids N-terminal to the end of DP178. DP107, despite the fact that it is a known coiled coil, is not predicted to contain a coiled-coil region using the Lupas method.

FIG. 21 represents search results for Human Respiratory Syncytial Virus (RSV; Strain A2) fusion glycoprotein F1 (PC/Gene protein sequence name PVGLF.sub.-- HRSVA). Motif 107x178x4 finds three hits including amino acids 152-202, 213-243, and 488-515. The arrangement of these hits is similar to what is found in HIV-1 except that the motif finds two regions with similarities to DP-178, one just downstream of what would be called the DP107 region or amino acids 213-243, and one just upstream of the transmembrane region (also similar to DP178) or amino acids 488-515. Motif ALLMOTI5 also finds three areas including amino acids 116-202, 267-302, and 506-549. The proline-leucine zipper motifs also gave several hits including amino acids 205-221 and 265-287 (P1LZIPC 265-280, P12LZIPC), and 484-513 (P7LZIPC and P12LZIPC 484-506, P23LZIPC). Notice that the PLZIP motifs also identify regions which share location similarities with DP-178 of HIV-1.

Motif hits for Simian immunodeficiency Virus gp41 (AGM3 isolate; PC/Gene protein sequence name PENV.sub.-- SIVAG) are shown in FIG. 22. Motif 107x178x4 finds three hits including amino acids 566-593, 597-624, and 703-730. The first two hits only have three amino acids between them and could probably be combined into one hit from 566-624 which would represent a DP17-like hit. Amino acids 703 to 730 would then represent a DP178-like hit. ALLMOTI5 also finds three hits including amino acids 556-628 (DP107-like), 651-699 (DP178-like), and 808-852 which represents the transmembrane spanning region. SIV also has one region from 655-692 with a high propensity to form a coiled coil as predicted by the Lupas algorithm Both 107x178x4 and ALLMOTI5 motifs find the same region. SIV does not have any PLZIP motif hits in gp41.

The identification of DP178/DP107 analogs for a second SIV isolate (MM251) is demonstrated in the Example presented, below, in Section 19.

Canine Distemper Virus (strain Onderstepoort) fusion glycoprotein F1 (PC/Gene Protein sequence name PVGLF.sub.-- CDVO) has regions similar to Human RSV which are predicted to be DP107-like and DP178-like (FIG. 23). Motif 107x178x4 highlights one area just C-terminal to the fusion peptide at amino acids 252-293. Amino acids 252-286 are also predicted to be coiled coil using the Lupas algorithm. Almost 100 amino acids C-terminal to the first region is a DP178-like area at residues 340-367. ALLMOTI5 highlights three areas of interest including: amino acids 228-297, which completely overlaps both the Lupas prediction and the DP107-like 107x178x4 hit; residues 340-381, which overlaps the second 107x178x4 hit; and amino acids 568-602, which is DP178-like in that it is located just N-terminal to the transmembrane region. It also overlaps another region (residues 570-602) predicted by the Lupas method to have a high propensity to form a coiled coil. Several PLZIP motifs successfully identified areas; of interest including P6 and P12LZIPC which highlight residues 336-357 and 336-361 respectively; P1 and P12LZIPC which find residues 398-414; and P12 and P23LZIPC which find residues 562-589 and 562-592 respectively.

FIG. 24 shows the motif hits found in Newcastle Disease Virus (strain Australia-Victoria/32; PC Gene protein sequence name PVGLF.sub.-- NDVA). Motif 107x178x4 finds two areas including a DP107-like hit at amino acids 151-178 and a DP178-like hit at residues 426-512. ALLMOTI5 finds three areas including residues 117-182, 231-272, and 426-512. The hits from 426-512 include a region which is predicted by the Lupas method to have a high coiled-coil propensity (460-503). The PLZIP motifs identify only one region of interest at amino acids 273-289 (P1 and 12LZIPC).

Both motifs 107x178x4 and ALLMOTI5 exhibit DP107-like hits in the same region, 115-182 and 117-182 respectively, of Human Parainfluenza Virus (strain NIH 47885; PC/Gene protein sequence name PVGLF.sub.-- p13H4; (FIG. 25). In addition, the two motifs have a DP178-like hit just slightly C-terminal at amino acids 207-241. Both motifs also have DP178-like hits nearer the transmembrane region including amino acids 457-497 and 462-512 respectively. Several PLZIP motif hits are also observed including 283-303 (P5LZIPC), 283-310 (P12LZIPC), 453-474 (P6LZIPC), and 453-481 (P23LZIPC). The Lupas algorithm predicts that amino acids 122-176 may have a propensity to form a coiled-coil.

FIG. 26 illustrates the Lupas prediction for a coiled coil in Influenza A Virus (strain A/Aichi/2/68) at residues 379-436, as well as the motif hits for 107x178x4 at amino acids 387-453, and for ALLMOTI5 at residues 380-456. Residues 383-471 (38-125 of HA2) were shown by Carr and Kim to be an extended coiled coil when under acidic pH (Carr and Kim, 1993, Cell 73: 823-832). The Lupas algorithm predicts a coiled-coil at residues 379-436. All three methods successfully predicted the region shown to actually have coiled-coil structure; however, ALLMOTI5 predicted the greatest portion of the 88 residue stretch.

In the Example presented herein, respiratory syncytial virus (RSV) peptides identified by utilizing the computer-assisted search motifs described in the Examples presented in Sections 9 and 11, above, were tested for anti-RSV activity. Additionally, circular dichroism (CD) structural analyses were conducted on the peptides, as discussed below. It is demonstrated that several of the identified peptides exhibit potent antiviral capability. Additionally, it is shown that several of these peptides exhibit a substantial helical character.

Structural analyses: The CD spectra were measured in a 10 mM sodium phosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mM concentrations, using a 1 cm pathlength cell on a Jobin/Yvon Autodichrograph Mark V CD spectrophotometer. Peptides were synthesized according to the methods described, above, in Section 6.1. Peptide concentrations were determined from A.sub.280 using Edlehoch's method (1967, Biochemistry 6:1948).

Anti-RSV antiviral activity assays: The assay utilized herein tested the ability of the peptides to disrupt the ability of HEp2 cells acutely infected with RSV (i.e., cells which are infected with a multiplicity of infection of greater than 2) to fuse and cause syncytial formation on a monolayer of uninfected an uninfected line of Hep-2 cells. The lower the observed level of fusion, the greater the antiviral activity of the peptide was determined to be.

Uninfected confluent monolayers of Hep-2 cells were grown in microtiter wells in 3% EMEM (Eagle Minimum Essential Medium w/o L-glutamine [Bio Whittaker Cat. No. 12-125F], with fetal bovine serum [FBS; which had been heat inactivated for 30 minutes at 56.degree. C.; Bio Whittaker Cat. No. 14-501F) supplemented at 3%, antibiotics (penicillin/streptomycin; Bio Whittaker Cat. No. 17-602E) added at 1%, and glutamine added at 1%.

To prepare Hep2 cells for addition to uninfected cells, cultures of acutely infected Hep2 cells were washed with DPBS (Dulbecco's Phosphate Buffered Saline w/o calcium or magnesium; Bio Whittaker Cat. No. 17-512F) and cell monolayers were removed with Versene (1:5000; Gibco Life Technologies Cat. No. 15040-017). The cells were spun 10 minutes and resuspended in 3% FBS. Cell counts were performed using a hemacytometer. Persistent cells were added to the uninfected Hep-2 cells.

The antiviral assay was conducted by, first, removing all media from the wells containing uninfected Hep-2 cells, then adding peptides (at the dilutions described below) in 3% EMEM, and 100 acutely RSV-infected Hep2 cells per well. Wells were then incubated at 37.degree. C. for 48 hours.

After incubation, cells in control wells were checked for fusion centers, media was removed from the wells, followed by addition, to each well, of either Crystal Violet stain or XTT. With respect to Crystal Violet, approximately 50 .mu.l 0.25% Crystal Violet stain in methanol were added to each well. The wells were rinsed immediately, to remove excess stain, and were allowed to dry. The number of syncytia per well were then counted, using a dissecting microscope.

With respect to XTT (2,3-bis[2-Methoxy-4-nitro-5-sulfophenyl]-2H-tetrazolium-5-carboxyanilide inner salt), 50 .mu.l XTT (1 mg/ml in RPMI buffered with 100 mM HEPES, pH 7.2-7.4, plus 5% DMSO) were added to each well. The OD.sub.450/690 was measured (after blanking against growth medium without cells or reagents, and against reagents) according to standard procedures.

Peptides: The peptides characterized in the study presented herein were:

1) peptides T-142 to T-155 and T-575, as shown in FIGS. 27A-C, and peptides T-22 to T-27, T-68, T-334 and T-371 to T-375 and T-575, as shown in FIG. 27C;

2) peptides T-120 to T-141 and T-576, as shown in FIGS. 27D-F, and peptides T-12, T-13, T-15, T-19, T-28 to T-30, T-66, T-69, T-70 and T-576, as shown in FIG. 27F; and

3) peptides T-67 and T-104 to T-119 and T-384, as shown in FIGS. 28A-C, and peptides T-71, T-613 to T-617, T-662 to T-676 and T-730, as shown in FIG. 28C.

The peptides of group 1 represent portions of the RSV F2 protein DP178/107-like region. The peptides of group 2 represent portions of the RSV F1 protein DP107-like region. The peptides of groups 3 represent portions of the RSV F1 protein DP178-like region.

Each peptide was tested at 2-fold serial dilutions ranging from 100 .mu.g/ml to approximately 100 ng/ml. For each of the assays, a well containing no peptide was also used. The IC.sub.50 data for each peptide represents the average of several experiments conducted utilizing that peptide.

The data summarized in FIGS. 27A-C and 28A-C represent antiviral and structural information obtained from peptides derived from the RSV F2 DP178/DP107-like F2 region (FIGS. 27A-C), the RSV F1 DP-107-like region (FIGS. 27D-F) and the RSV DP178-like F2 region (FIGS. 28A-C).

As shown in FIGS. 27A-F, a number of the RSV DP178/DP107-like peptides exhibited a detectable level of antiviral activity. Peptides from the RSV DP178/DP107-like F2 region (FIGS. 27A-C), for example, T-142 to T-145 and T-334 purfied peptides, exhibited detectable levels of antiviral activity, as evidenced by their IC.sub.50 values. Further, a number of RSV F1 DP107-like peptides (FIGS. 27D-F) exhibited a sizable level of antiviral activity as purified peptides, including, for example, peptides T-124 to T-127, T-131, T-135 and T-137 to T-139, as demonstrated by their low IC.sub.50 values. In addition, CD analysis FIGS. 27A-B, 27D-E) reveals that many of the peptides exhibit some detectable level of helical structure.

The results summarized in FIGS. 28A-C demonstrate that a number of DP178-like purified peptides exhibit a range of potent anti-viral activity. These peptides include, for example, T-67, T-104, T-105 and T-107 to T-119, as listed in FIGS. 28A-B, and T-665 to T-669 and T-671 to T-673, as listed in FIG. 28C. In addition, some of the DP178-like peptides exhibited some level of helicity.

Thus, the computer assisted searches described, hereinabove, successfully identified viral peptide domains that represent highly promising anti-RSV antiviral compounds.

In the Example presented herein, human parainfluenza virus type 3 (HPIV3) peptides identified by utilizing the computer-assisted search motifs described in the Examples presented in Sections 9 and 15, above, were tested for anti-HPIV3 activity. Additionally, circular dichroism (CD) structural analyses were conducted on the peptides, as discussed below. It is demonstrated that several of the identified peptides exhibit potent antiviral capability. Additionally, it is shown that several of these peptides exhibit a substantial helical character.

Structural analyses: Structural analyses consisted of circular dichroism (CD) studies. The CD spectra were measured in a 10 mM sodium phosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mM concentrations, using a 1 cm pathlength cell on a Jobin/Yvon Autodichrograph Mark V CD spectrophotometer. Peptide concentrations were determined from A.sub.280 using Edlehoch's method (1967, Biochemistry 6:1948).

Anti-HPIV3 antiviral activity assays: The assay utilized herein tested the ability of the peptides to disrupt the ability of Hep2 cells chronically infected with HPIV3 to fuse and cause syncytial formation on a monolayer of an uninfected line of CV-1W cells. The more potent the lower the observed level of fusion, the greater the antiviral activity of the peptide.

Uninfected confluent monolayers of CV-1W cells were grown in microtiter wells in 3% EMEM (Eagle Minimum Essential Medium w/o L-glutamine [Bio Whittaker Cat. No. 12-125F], with fetal bovine serum [FBS; which had been heat inactivated for 30 minutes at 56.degree. C.; Bio Whittaker Cat. No. 14-501F) supplemented at 3%, antibiotics/antimycotics (Gibco BRL Life Technologies Cat. No. 15040-017) added at 1%, and glutamine added at 1%.

To prepare Hep2 cells for addition to uninfected cells, cultures of chronically infected Hep2 cells were washed with DPBS (Dulbecco's Phosphate Buffered Saline w/o calcium, or magnesium; Bio Whittaker Cat. No. 17-512F) and cell monolayers were removed with Versene (1:5000; Gibco Life Technologies Cat. No. 15040-017). The cells were spun 10 minutes and resuspended in 3% FBS. Cell counts were performed using a hemacytometer. Persistent cells were added to the uninfected CV-1W cells.

The antiviral assay was conducted by, first, removing all media from the wells containing uninfected CV-1W cells, then adding peptides (at the dilutions described below) in 3% EMEM, and 500 chronically HPIV3-infected Hep2 cells per well. Wells were then incubated at 37.degree. C. for 24 hours.

On day 2, after cells in control wells were checked for fusion centers, media was removed from the wells, followed by addition, to each well, of approximately 50 .mu.l 0.25% Crystal Violet stain in methanol. Wells were rinsed immediately, to remove excess stain and were then allowed to dry. The number of syncytia per well were then counted, using a dissecting microscope.

Alternatively, instead of Crystal Violet analysis, cells were assayed with XTT, as described, above, in Section 17.1.

Peptides: The peptides characterized in the study presented herein were:

1) Peptides 157 to 188, as shown in FIGS. 29A-C, and peptides T-38 to T-40, T-42 to T-46 and T-582, as shown in FIGS. 29D-E. These peptides are derived from the DP107 region of the HPIV3 F1 fusion protein (represented by HPF3 107, as shown in FIGS. 29A-C); and

2) Peptides 189 to 210, as shown in FIGS. 30A-B, and T-269, T-626, T-383 and T-577 to T-579, as shown in FIG. 30C. These peptides are primarily derived from the DP178 region of the HPIV3 F1 fusion protein (represented by HPF3 178, as shown in FIGS. 30A-B). Peptide T-626 contains two mutated amino acid resides (represented by a shaded background). Additionally, peptide T-577 represents F1 amino acids 65-100, T-578 represents F1 amino acids 207-242 and T-579 represents F1 amino acids 273-309.

Each peptide was tested at 2-fold serial dilutions ranging from 500 .mu.g/ml to approximately 500 ng/ml. For each of the assays, a well containing no peptide was also used.

The data summarized in FIGS. 29A-E and 30A-C represent antiviral and structural information obtained from peptides derived from the HPIV3 fusion protein DP107-like region (FIGS. 29A-E) and the HPIV3 fusion protein DP178-like region (FIGS. 30A-C).

As shown in FIGS. 29A-E, a number of the HPIV3 DP107-like peptides exhibited potent levels of antiviral activity. These peptides include, for example, peptides T-40, T-172 to T-175, T-178, T-184 and T-185.

CD analysis reveals that a number of the peptides exhibit detectable to substantial level of helical structure.

The results summarized in FIGS. 30A-C demonstrate that a number of the DP178-like peptides tested exhibit a range of anti-viral activity. These peptides include, for example, peptides 194 to 211, as evidenced by their low IC.sub.50 values. In fact, peptides 201 to 205 exhibit: IC.sub.50 values in the nanogram/ml range. In addition, many of the DP178-like peptides exhibited some level of helicity.

Thus, the computer assisted searches described, hereinabove, have successfully identified viral peptide domains that represent highly promising anti-HPIV3 antiviral compounds.

FIG. 31 represents search results for SIV isolate MM251 (PC/Gene.RTM. protein sequence PENV.sub.-- SIVM2). Both 107x178x4 and ALLMOTI5 search motifs identified two regions with similarities to DP107 and/or DP178.

The peptide regions found by 107x178x4 were located at amino acid residues 156-215 and 277-289. The peptide regions found by ALLMOTI5 were located at amino acid residues 156-219 and 245-286. Both motifs, therefore, identify similar regions.

Interestingly, the first SIV peptide region (i.e., from amino acid residue 156 to approximately amino acid residue 219) correlates with a DP107 region, while the second region identified (i.e., from approximately amino acid residue 245 to approximately amino acid residue 289) correlates with the DP178 region of HIV. In fact, an alignment of SIV isolate MM251 and HIV isolate BRU, followed by a selection of the best peptide matches for HIV DP107 and DP178, reveals that the best matches are found within the peptide regions identified by the 107x178x4 and ALLMOTI5 search motifs.

It should be noted that a potential coiled-coil region at amino acid residues 242-282 is predicted by the Lupas program. This is similar to the observation in HIV in which the coiled-coil is predicted by the Lupas program to be in the DP178 rather than in the DP107 region. It is possible, therefore, that SIV may be similar to HIV in that it may contain a coiled-coil structure in the DP107 region, despite such a structure being missed by the Lupas algorithm. Likewise, it may be that the region corresponding to a DP178 analog in SIV may exhibit an undefined structure, despite the Lupas program's prediction of a coiled-coil structure.

The results presented herein describe the identification of DP178/DP107 analogs within two different Epstein-Barr Virus proteins. Epstein-Barr is a human herpes virus which is the causative agent of, for example, infectious mononucleosis (IM), and is also associated with nasopharyngeal carcinomas (NPC), Burkitt's lymphoma and other diseases. The virus predominantly exists in the latent form and is activated by a variety of stimuli.

FIG. 32 depicts the search motif results for the Epstein-Barr Virus (Strain B95-8; PC/Gene.RTM. protein sequence PVGLB.sub.-- EBV) glycoprotein gp110 precursor (gp115). The 107x178x4 motif identified two regions of interest, namely the regions covered by amino acid residues 95-122 and 631-658. One PZIP region was identified at amino acid residue 732-752 which is most likely a cytoplasmic region of the protein. The Lupas algorithm predicts a coiled-coil structure for amino acids 657-684. No ALLMOTI5 regions were identified.

FIG. 33 depicts the search motif results for the Zebra (or EB1) trans-activator protein (BZLF1) of the above-identified Epstein-Barr virus. This protein is a transcription factor which represents the primary mediator of viral reactivation. It is a member of the b-ZIP family of transcription factors and shares significant homology with the basic DNA-binding and dimerization domains of the cellular oncogenes c-fos and C/EBP. The Zebra protein functions as a homodimer.

Search results demonstrate that the Zebra protein exhibits a single region which is predicted to be either of DP107 or DP178 similarity, and is found between the known DNA binding and dimerization regions of the protein. Specifically, this region is located at amino acid residues 193-220, as shown in FIG. 33. The Lupas program predicted no coiled-coil regions.

FIG. 34 illustrates the motif search results for the fusion protein F1 of measles virus, strain Edmonston (PC Gene.RTM. protein sequence PVGLF.sub.-- MEASE), successfully identifying DP178/DP107 analogs.

The 107x178x4 motif identifies a single region at amino acid residues 228-262. The ALLMOTI5 search motif identifies three regions, including amino acid residues 116-184, 228-269 and 452-500. Three regions containing proline residues followed by a leucine zipper-like sequence were found beginning at proline residues 214, 286 and 451.

The Lupas program identified two regions it predicted had potential for coiled-coil structure, which include amino acid residues 141-172 and 444-483.

FIG. 35 depicts the results of a PZIP motif search conducted on the Hepatitis B virus subtype AYW. Two regions of interest within the major surface antigen precursor S protein were identified. The first lies just C-terminal to the proposed fusion peptide of the major surface antigen (Hbs) which is found at amino acid residues 174-191. The second region is located at amino acid residues 233-267. The Lupas program predicts no coiled-coil repeat regions.

In order to test the potential anti-HBV antiviral activity of these D178/DP107 analog regions, peptides derived from area around the analog regions are synthesized, as shown in FIGS. 52A-B. These peptides represent one amino acid peptide "walks" through the putative DP178/DP107 analog regions. The peptides are synthesized according to standard Fmoc chemistry on Rinkamide MBHA resins to provide for carboxy terminal blockade (Chang, C. D. and Meinhofer, J., 1978, Int. J. Pept. Protein Res. 11:246-249; Fields, G. B. and Noble, R. L., 1990, Int. J. Pept. Protein Res. 35:161-214). Following complete synthesis, the peptide amino-terminus is blocked through automated acetylation and the peptide is cleaved with trifluoroacetic acid (TFA) and the appropriate scavengers (King, D. S. et al., 1990, Int. J. Pept. Res. 36:255-266). After cleavage, the peptide is precipitated with ether and dried under vacuum for 24 hours.

The anti-HBV activity of the peptides is tested by utilizing standard assays to determine the test peptide concentration required to cause an acceptable (e.g., 90%) decrease in the amount of viral progeny formed by cells exposed to an HBV viral inoculum. Candidate antiviral peptides are further characterized in model systems such as wood chuck tissue culture and animal systems, prior to testing on humans.

The results depicted herein illustrate the results of search motifs conducted on the Simian Mason-Pfizer monkey virus. The motifs reveal DP178/DP107 analogs within the enveloped (TM) protein GP20, as shown in FIG. 36.

The 107x178x4 motifs identifies a region at amino acid residues 422-470. The ALLMOTI5 finds a region at amino acid residues 408-474. The Lupas program predicted a coiled-coil structure a amino acids 424-459.

The results presented herein demonstrate the identification of DP178/DP107 analogs corresponding to sequences present in proteins of a variety of bacterial species.

FIG. 37 depicts the search motif results for the Pseudomonas aeruginosa fimbrial protein (Pilin). Two regions were identified by motifs 107x178x4 and ALLMOTI5. The regions located at amino acid residues 30-67 and 80-144 were identified by the 107x178x4 motif. The regions at amino acid residues 30-68 and 80-125 were identified by the ALLMOTI5.

FIG. 38 depicts the search motif results for the Pseudomonas gonorrhoeae fimbrial protein (Pilin). A single region was identified by both the 107x178x4 and the ALLMOTI5 motifs. The region located at amino acid residues 66-97 was identified by the 107x178x4 motif. The region located at amino acid residues 66-125 were identified by the ALLMOTI5 search motif. No coiled-coil regions were predicted by the Lupas program.

FIG. 39 depicts the search motif results for the Hemophilus Influenza fimbrial protein (Pilin). A single region was identified by both the 107x178x4 and the ALLMOTI5 motifs. The region located at amino acid residues 102-129 was identified by the 107x178x4 motif. The region located at amino acid residues 102-148 were identified by the ALLMOTI5 search motif. No coiled-coil regions were predicted by the Lupas program.

FIG. 40 depicts the search motif results for the Staphylococcus aureus toxic shock syndrome Hemophilus Influenza fimbrial protein (Pilin). A single region was identified by both the 107x178x4 and the ALLMOTI5 motifs. The region located at amino acid residues 102-129 was identified by the 107x178x4 motif. The region located at amino acid residues 102-148 were identified by the ALLMOTI5 search motif. No coiled-coil regions were predicted by the Lupas program.

FIG. 41 summarizes the motif search results conducted on the Staphylococcus aureus enterotoxin Type E protein. These results demonstrate the successful identification of DP178/DP107 analogs corresponding to peptide sequences within this protein, as described below.

The ALLMOTI5 motif identified a region at amino acid residues 22-27. The 107x178x4 motif identified two regions, with the first at amino acid residues 26-69 and the second at 88-115. A P12LZIPC motif search identified two regions, at amino acid residues 163-181 and 230-250.

The Lupas program predicted a region with a high propensity for coiling at amino acid residues 25-54. This sequence is completely contained within the first region identified by both ALLMOTI5 and 107x178x4 motifs.

FIG. 42 depicts the search motif results conducted on a second Staphylococcus aureus toxin, enterotoxin A. Two regions were identified by the ALLMOTI5 motif, at amino acid residues 22-70 and amino acid residues 164-205. The 107x178x4 motif found two regions, the first at amino acid residues 26-69 and the second at amino acid residues 165-192. A P23LZIPC motif search revealed a region at amino acid residues 216-250. No coiled-coil regions were predicted by the Lupas program.

FIG. 43 shows the motif search results conducted on the E. coli heat labile enterotoxin A protein, demonstrating that identification of DP178/DP107 analogs corresponding to peptides located within this protein. Two regions were identified by the ALLMOTI5 motif, with the first residing at amino acid residues 55-115, and the second residing at amino acid residues 216-254. The 107x178x4 motif identified a single region at amino acid residues 78-105. No coiled-coil regions were predicted by the Lupas program.

The results presented herein demonstrate the identification of DP178/DP107 analogs corresponding to peptide sequences present within several different human proteins.

FIG. 44 illustrates the search motif results conducted on the human c-fos oncoprotein. The ALLMOTI5 motif identified a single region at amino acid residues 155-193. The 107x178x4 motif identified one region at amino acid residues 162-193. The Lupas program predicted a region at amino acid residues 148-201 to have coiled-coil structure.

FIG. 45 illustrates the search motif results conducted on the human lupus KU autoantigen protein P70. The ALLMOTI5 motif identified a single region at amino acid residues 229-280. The 107x178x4 motif identified one region at amino acid residues 235-292. The Lupas program predicted a region at amino acid residues 232-267 to have coiled-coil structure.

FIG. 46 illustrates the search motif results conducted on the human zinc finger protein 10. The ALLMOTI5 motif identified a single region at amino acid residues 29-81. The 107x178x4 motif identified one region at amino acid residues 29-56. A P23LZIPC motif search found a single region at amino acid residues 420-457. The Lupas program predicted no coiled-coil regions.

In the Example presented herein, measles (MeV) virus DP178-like peptides identified by utilizing the computer-assisted search motifs described in the Examples presented in Sections 9 and 21, above, are tested for anti-MeV activity. Additionally, circular dichroism (CD) structural analyses are conducted on the peptides, as discussed below. It is demonstrated that several of the identified peptides exhibit potent antiviral capability. Additionally, it is shown that none of the these peptides exhibit a substantial helical character.

Structural analyses: The CD spectra were measured in a 10 mM sodium phosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mM concentrations, using a 1 cm pathlength cell on a Jobin/Yvon Autodichrograph Mark V CD spectrophotometer. Peptide concentrations were determined from A.sub.280 using Edlehoch's method (1967, Biochemistry 6:1948).

Anti-MeV antiviral activity syncytial reduction assay: The assay utilized herein tested the ability of the peptides to disrupt the ability of Vero cells acutely infected with MeV (i.e., cells which are infected with a multiplicity of infection of 2-3) to fuse and cause syncytial formation on a monolayer of an uninfected line of Vero cells. The more potent the peptide, the lower the observed level of fusion, the greater the antiviral activity of the peptide.

Uninfected confluent monolayers of Vero cells were grown in microtiter wells in 10% FBS EMEM (Eagle Minimum Essential Medium w/o L-glutamine [Bio Whittaker Cat. No. 12-125F], with fetal bovine serum [FBS; which had been heat inactivated for 30 minutes at 56.degree. C.; Bio Whittaker Cat. No. 14-501F) supplemented at 10%, antibiotics/antimycotics (Bio Whittaker Cat. No. 17-602E) added at 1%, and glutamine added at 1%.

To prepare acutely infected Vero cells for addition to the uninfected cells, cultures of acutely infected Vero cells were washed twice with HBSS (Bio Whittaker Cat. No. 10-543F) and cell monolayers were removed with trypsin (Bio Whittaker Cat. No. 17-161E). Once cells detached, media was added, any remaining clumps of cells were dispersed, and hemacytometer cell counts were performed.

The antiviral assay was conducted by, first, removing all media from the wells containing uninfected Vero cells, then adding peptides (at the dilutions described below) in 10% FBS EMEM, and 50-100 acutely MeV-infected Vero cells per well. Wells were then incubated at 37.degree. C. for a maximum of 18 hours.

On day 2, after cells in control wells were checked for fusion centers, media was removed from the wells, followed by addition, to each well, of approximately 50 .mu.l 0.25% Crystal Violet stain in methanol. Wells were rinsed twice with water immediately, to remove excess stain and were then allowed to dry. The number of syncytia per well were then counted, using a dissecting microscope.

Anti-MeV antiviral activity plaque reduction assay: The assay utilized herein tested the ability of the peptides to disrupt the ability of MeV to infect permissive, uninfected Vero cells, leading to the infected cells' fusing with uninfected cells to produce syncytia. The lower the observed level of syncytial formation, the greater the antiviral activity of the peptide.

Monolayers of uninfected Vero cells are grown as described above.

The antiviral assay was conducted by, first, removing all media from the wells containing uninfected Vero cells, then adding peptides (at the dilutions described below) in 10% FBS EMEM, and MeV stock virus at a final concentration of 30 plaque forming units (PFU) per well. Wells were then incubated at 37.degree. C. for a minimum of 36 hours and a maximum of 48 hours.

On day 2, after cells in control wells were checked for fusion centers, media was removed from the wells, followed by addition, to each well, of approximately 50 .mu.l 0.25% Crystal Violet stain in methanol. Wells were rinsed twice with water immediately, to remove excess stain and were then allowed to dry. The number of syncytia per well were then counted, using a dissecting microscope.

Peptides: The peptides characterized in the study presented herein were peptides T-252A0 to T-256A0, T-257B1/C1, and T-258B1 to T-265B0, and T-266A0 to T-268A0, as shown in FIGS. 47A-B. These peptides represent a walk through the DP178-like region of the MeV fusion protein.

Each peptide was tested at 2-fold serial dilutions ranging from 100 .mu.g/ml to approximately 100 ng/ml. For each of the assays, a well containing no peptide was also used.

The data summarized in FIGS. 47A-B represents antiviral and structural information obtained via "peptide walks" through the DP178-like region of the MeV fusion protein.

As shown in FIGS. 47A-B, the MeV DP178-like peptides exhibited a range of antiviral activity as crude peptides. Several of these peptides were chosen for purification and further antiviral characterization. The IC.sub.50 values for such peptides were determined, as shown in FIGS. 47A-B, and ranged from 1.35 .mu.g/ml (T-257B1/C1) to 0.072 .mu.g/ml (T-265B1). None of the DP178-like peptides showed, by CD analysis, a detectable level of helicity.

Thus, the computer assisted searches described, hereinabove, as in for example, the Example presented in Section 9, for example, successfully identified viral peptide domains that represent highly promising anti-MeV antiviral compounds.

In the Example presented herein, simian immunodeficiency virus (SIV) DP178-like peptides identified by utilizing the computer-assisted search motifs described in the Examples presented in Sections 9, 12 and 19, above, were tested for anti-SIV activity. It is demonstrated that several of the identified peptides exhibit potent antiviral capability.

Anti-SIV antiviral assays: The assay utilized herein were as reported in Langolis et al. (Langolis, A. J. et al., 1991, AIDS Research and Human Retroviruses 7:713-720).

Peptides: The peptides characterized in the study presented herein were peptides T-391 to T-400, as shown in FIGS. 48A-B. These peptides represent a walk through the DP178-like region of the SIV TM protein.

Each peptide was tested at 2-fold serial dilutions ranging from 100 .mu.g/ml to approximately 100 ng/ml. For each of the assays, a well containing no peptide was also used.

The data summarized in FIGS. 48A-B represents antiviral information obtained via "peptide walks" through the DP178-like region of the SIV TM protein.

As shown in FIGS. 48A-B, peptides T-391 to T-400 were tested and exhibited a potent antiviral activity as crude peptides.

Thus, the computer assisted searches described, hereinabove, as in for example, the Example presented in Section 9, for example, successfully identified viral peptide domains that represent highly promising anti-SIV antiviral compounds.

The Example presented in this Section represents a study of the antiviral activity of DP107 and DP178 truncations and mutations. It is demonstrated that several of these DP107 and DP178 modified peptides exhibit substantial antiviral activity.

Anti-HIV assays: The antiviral assays performed were as those described, above, in Section 6.1. Assays utilized HIV-1/IIIb and/or HIV-2 NIHZ isolates. Purified peptides were used, unless otherwise noted in FIGS. 49A-L.

Peptides: The peptides characterized in the study presented herein were:

1) FIGS. 49A-L present peptides derived from the region around and containing the DP178 region of the HIV-1 BRU isolate. Specifically, this region spanned from gp41 amino acid residue 615 to amino acid residue 717. The peptides listed contain truncations of this region and/or mutations which vary from the DP178 sequence amino acid sequence. Further, certain of the peptides have had amino- and/or carboxy-terminal groups either added or removed, as indicated in the figures; and

2) FIGS. 50A-B. presents peptides which represent truncations of DP107 and/or the gp41 region surrounding the DP107 amino acid sequence of HIV-1 BRU isolate. Certain of the peptides are unblocked or biotinylated, as indicated in the figure.

Blocked peptides contained an acyl N-terminus and an amido C-terminus.

Anti-HIV antiviral data was obtained with the group 1 DP178-derived peptides listed in FIGS. 49A-L. The full-length, non-mutant DP178 peptide (referred to in FIGS. 49A-L as T20) results shown are for 4 ng/ml.

In FIGS. 49A-D, a number of the DP178 truncations exhibited a high level of antiviral activity, as evidenced by their low IC.sub.50 values. These include, for example, test peptides T-50, T-624, T-636 to T-641, T-645 to T-650, T-652 to T-654 and T-656. T-50 represents a test peptide which contains a point mutation, as indicated by the residue's shaded background. The HIV-1-derived test peptides exhibited a distinct strain-specific antiviral activity, in that none of the peptides tested on the HIV-2 NIHZ isolate demonstrated appreciable anti-HIV-2 antiviral activity.

Among the peptides listed in FIGS. 49E-H, are test peptides representing the amino (T-4) and carboxy (T-3) terminal halves of DP178 were tested. The amino terminal peptide was not active (IC.sub.50 >400 .mu.g/ml) whereas the carboxy terminal peptide showed potent antiviral activity (IC.sub.50 =3 .mu.g/ml). A number of additional test peptides also exhibited a high level of antiviral activity. These included, for example, T-61/T-102, T-217 to T-221, T-235, T-381, T-677, T-377, T-590, T-378, T-591, T-271 to T-272, T-611, T-222 to T-223 and T-60/T-224. Certain of the antiviral peptides contain point mutations and/or amino acid residue additions which vary from the DP178 amino acid sequence.

In FIGS. 49I-L, point mutations and/or amino and/or carboxy-terminal modifications are introduced into the DP178 amino acid sequence itself. As shown in the figure, the majority of the test peptides listed exhibit potent antiviral activity.

Truncations of the DP107 peptide (referred to in FIGS. 50A-B as T21) were also produced and tested, as shown in FIGS. 50A-B. FIGS. 50A-B also presents data concerning blocked and unblocked peptides which contain additional amino acid residues from the gp41 region in which the DP107 sequence resides. Most of these peptides showed antiviral activity, as evidenced by their low IC.sub.50 values.

Thus, the results presented in this Section demonstrate that not only do the full length DP107 and DP178 peptides exhibit potent antiviral activity, but truncations and/or mutant versions of these peptides can also possess substantial antiviral character.

In the Example presented herein, peptides derived from the Epstein-Barr (EBV) DP-178/DP107 analog region of the Zebra protein identified, above, in the Example presented in Section 20 are described and tested for anti-EBV activity. It is demonstrated that among these peptides are ones which exhibit potential anti-viral activity.

Electrophoretic Mobility Shift Assays (EMSA): Briefly, an EBV Zebra protein was synthesized utilizing SP6 RNA polymerase in vitro transcription and wheat germ in vitro translation systems (Promega Corporation recommendations; Butler, E. T. and Chamberlain, M. J., 1984, J. Biol. Chem. 257:5772; Pelham, H. R. B. and Jackson, R. J., 1976, Eur. J. Biochem. 67:247). The in vitro translated Zebra protein was then preincubated with increasing amounts of peptide up to 250 ng/ml prior to the addition of 10,000 to 20,000 c.p.m. of a .sup.32 P-labeled Zebra response element DNA fragment. After a 20 minute incubation in the presence of the response element, the reaction was analyzed on a 4% non-denaturing polyacrylamide gel, followed by autoradiography, utilizing standard gel-shift procedures. The ability of a test peptide to prevent Zebra homodimer DNA binding was assayed by the peptide's ability to abolish the response element gel migration retardation characteristic of a protein-bound nucleic acid molecule.

Peptides: The peptides characterized in this study represent peptide walks through the region containing, and flanked on both sides by, the DP178/DP107 analog region identified in the Example presented in Section 20, above, and shown as shown in FIG. 33. Specifically, the peptide walks covered the region from amino acid residue 173 to amino acid residue 246 of the EBV Zebra protein.

Each of the tested peptides were analyzed at a range of concentrations, with 150 ng/ml being the lowest concentration at which any of the peptides exerted an inhibitory effect.

The EBV Zebra protein transcription factor contains a DP178/DP107 analog region, as demonstrated in the Example presented, above, in Section 20. This protein appears to be the primary factor responsible for the reactivation capability of the virus. A method by which the DNA-binding function of the Zebra virus may be abolished may, therefore, represent an effective antiviral technique. In order to identify potential anti-EBV DP178/DP107 peptides, therefore, peptides derived from the region identified in Section 20, above, were tested for their ability to inhibit Zebra protein DNA binding.

The test peptides' ability to inhibit Zebra protein DNA binding was assayed via the EMSA assays described, above, in Section 28.1. The data summarized in FIGS. 51A-C presents the results of EMSA assays of the listed EBV test peptides. These peptides represent one amino acid "walks" through the region containing, and flanked on both sides by, the DP178/DP107 analog region identified in the Example presented in Section 20, above, and shown as shown in FIG. 33. As shown in FIGS. 51A-C, the region from which these peptides are derived lies from EBV Zebra protein amino acid residue 173 to 246. A number of the test peptides which were assayed exhibited an ability to inhibit Zebra protein homodimer DNA binding, including 439, 441, 444 and 445.

Those peptides which exhibit an ability to inhibit Zebra protein DNA binding represent potential anti-EBV antiviral compounds whose ability to inhibit EBV infection can be further characterized.

The present invention is not to be limited in scope by the specific embodiments described which are intended as single illustrations of individual aspects of the invention, and functionally equivalent methods and components are within the scope of the invention. Indeed, various modifications of the invention, in addition to those shown and described herein will become apparent to those skilled in the art from the foregoing description and accompanying drawings. Such modifications are intended to fall within the scope of the appended claims.